CsGy7G000700 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G000700
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	glycine-rich protein 2-like
Location	Gy14Chr7: 772360 .. 773618 (+)
RNA-Seq Expression	CsGy7G000700
Synteny	CsGy7G000700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAAATTTTGGTGATTAGGGTTTTTCAGTTGTTGGGTTTTCTTTGTGAAAGAAGGAGATCGAGGAAATGGGTGAAAGGGTTAGTGGAAAAGTGAAGTGGTTCAGTGACCAGAAGGGTTATGGCTTCATTTCCCCCAACGATGGTGGTGAAGATCTTTTCGTTCATCAATCCTCTATCAGATCCGACGGTTTCCGGAGCCTTGGTGTTGGTGAGGATGTTGAGTTTCTGATCGAGGCTGAGTCTGATGGCCGTTCCAAGGCTGTTGATGTCACTGGCCCTGGTGAAGCTTCTGTGCAGGGAAGTCGCGGCGGAGGAGGAGGCGGCGGCGGCGCTGGTGGTGGAGGTGGTTACTCAAGTGGAGGTGGTTATGGAGGAGGCGGTGGTGGTGGAAGGGGGAGACGTGGTGGTGGTGGATATGGGTTTAACGGTGGAAGTGGTGGTGGTGGCCGAGGTGGGTACGGCGGTGGTGGAGGCGGCTATGGTGGTGGGGGTTATGGAGGTGGTGGCGGTGGTGGTGGAGGTGGTGCTTGTTTCAAGTGTGGTGAGACTGGCCATATGGCGAGGGACTGCTACCAGAGTGGATCTCAAGGCGGCGGTGGTGATAGGTACGGCGGAGGCGGCGGCGGCGGTGGTGGTGGTGGAAACTGCTATAGCTGTGGTGAATCTGGGCATTTCGCTAGAGAATGTCCAAGCAGTGGTCGTTGATCGTCGCGTAAATTGGTGACCAGCAAGTCAATTTACTTTTGTTTGCTTCAATCTGGGGGTGTTTTGTTCGGTTTTCCTTTACCTTTCTATCTCAGTTTTGATCTACTGAGATCTGTAAGGTCATCTTTTAATAGGATTTGAGTAGTAGCCTTTTTCATTTTCTTTTTTTTGTCATCTATGGATTTCCAATCAGTTTAGTATCTATCTTTTGGTTGTTGGGTGTTGATGATTATGTTTGTTTGATGGATTTTAGGGTATTTTATCAGCTATCCTTAGAAAAAGAGATGATCTATGGAGGAAAGTTGAATATCTTCCTTTGATTTCTCTGTTTCTTTAACTGTTGATACAAGTATTTTCATATACAATGCCATCTGGTTTTCAATGAATGAATGGATCCATCTCTGATTTCTTCTGTAACTACACGGCTTAAGATCCTTTTTCTTTCCAGTTCATTTCTATTGAAATTATCTCTCTTGATTGAATCAATGCCACTGCATTCTTCTTTCCTATTCAATTATTGTTGGAATGAGCAGAGACTGGGAAAGGGAAATGC

mRNA sequence

GAGAAATTTTGGTGATTAGGGTTTTTCAGTTGTTGGGTTTTCTTTGTGAAAGAAGGAGATCGAGGAAATGGGTGAAAGGGTTAGTGGAAAAGTGAAGTGGTTCAGTGACCAGAAGGGTTATGGCTTCATTTCCCCCAACGATGGTGGTGAAGATCTTTTCGTTCATCAATCCTCTATCAGATCCGACGGTTTCCGGAGCCTTGGTGTTGGTGAGGATGTTGAGTTTCTGATCGAGGCTGAGTCTGATGGCCGTTCCAAGGCTGTTGATGTCACTGGCCCTGGTGAAGCTTCTGTGCAGGGAAGTCGCGGCGGAGGAGGAGGCGGCGGCGGCGCTGGTGGTGGAGGTGGTTACTCAAGTGGAGGTGGTTATGGAGGAGGCGGTGGTGGTGGAAGGGGGAGACGTGGTGGTGGTGGATATGGGTTTAACGGTGGAAGTGGTGGTGGTGGCCGAGGTGGGTACGGCGGTGGTGGAGGCGGCTATGGTGGTGGGGGTTATGGAGGTGGTGGCGGTGGTGGTGGAGGTGGTGCTTGTTTCAAGTGTGGTGAGACTGGCCATATGGCGAGGGACTGCTACCAGAGTGGATCTCAAGGCGGCGGTGGTGATAGGTACGGCGGAGGCGGCGGCGGCGGTGGTGGTGGTGGAAACTGCTATAGCTGTGGTGAATCTGGGCATTTCGCTAGAGAATGTCCAAGCAGTGGTCGTTGATCGTCGCGTAAATTGGTGACCAGCAAGTCAATTTACTTTTGTTTGCTTCAATCTGGGGGTGTTTTGTTCGGTTTTCCTTTACCTTTCTATCTCAGTTTTGATCTACTGAGATCTGTAAGGTCATCTTTTAATAGGATTTGAGTAGTAGCCTTTTTCATTTTCTTTTTTTTGTCATCTATGGATTTCCAATCAGTTTAGTATCTATCTTTTGGTTGTTGGGTGTTGATGATTATGTTTGTTTGATGGATTTTAGGGTATTTTATCAGCTATCCTTAGAAAAAGAGATGATCTATGGAGGAAAGTTGAATATCTTCCTTTGATTTCTCTGTTTCTTTAACTGTTGATACAAGTATTTTCATATACAATGCCATCTGGTTTTCAATGAATGAATGGATCCATCTCTGATTTCTTCTGTAACTACACGGCTTAAGATCCTTTTTCTTTCCAGTTCATTTCTATTGAAATTATCTCTCTTGATTGAATCAATGCCACTGCATTCTTCTTTCCTATTCAATTATTGTTGGAATGAGCAGAGACTGGGAAAGGGAAATGC

Coding sequence (CDS)

ATGGGTGAAAGGGTTAGTGGAAAAGTGAAGTGGTTCAGTGACCAGAAGGGTTATGGCTTCATTTCCCCCAACGATGGTGGTGAAGATCTTTTCGTTCATCAATCCTCTATCAGATCCGACGGTTTCCGGAGCCTTGGTGTTGGTGAGGATGTTGAGTTTCTGATCGAGGCTGAGTCTGATGGCCGTTCCAAGGCTGTTGATGTCACTGGCCCTGGTGAAGCTTCTGTGCAGGGAAGTCGCGGCGGAGGAGGAGGCGGCGGCGGCGCTGGTGGTGGAGGTGGTTACTCAAGTGGAGGTGGTTATGGAGGAGGCGGTGGTGGTGGAAGGGGGAGACGTGGTGGTGGTGGATATGGGTTTAACGGTGGAAGTGGTGGTGGTGGCCGAGGTGGGTACGGCGGTGGTGGAGGCGGCTATGGTGGTGGGGGTTATGGAGGTGGTGGCGGTGGTGGTGGAGGTGGTGCTTGTTTCAAGTGTGGTGAGACTGGCCATATGGCGAGGGACTGCTACCAGAGTGGATCTCAAGGCGGCGGTGGTGATAGGTACGGCGGAGGCGGCGGCGGCGGTGGTGGTGGTGGAAACTGCTATAGCTGTGGTGAATCTGGGCATTTCGCTAGAGAATGTCCAAGCAGTGGTCGTTGA

Protein sequence

MGERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSSGGGYGGGGGGGRGRRGGGGYGFNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGGDRYGGGGGGGGGGGNCYSCGESGHFARECPSSGR*

Homology

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BLAST of CsGy7G000700 vs. ExPASy Swiss-Prot
Match: P27484 (Glycine-rich protein 2 OS=Nicotiana sylvestris OX=4096 GN=GRP-2 PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 4.9e-50
Identity = 152/211 (72.04%), Postives = 164/211 (77.73%), Query Frame = 0


Query: 2   GERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDG 61
           G+R  G VKWFSDQKG+GFI+P+DGGEDLFVHQS IRS+GFRSL  GE VEF +E+  DG
Sbjct: 6   GQRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDG 65

Query: 62  RSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSSGGGYGGGGGGGRGRRGGGGYGFNG 121
           R+KAVDVTGP  A+VQG RGGGGGGGG GGGG     GGYGGGG GG    GGG  G+ G
Sbjct: 66  RTKAVDVTGPDGAAVQGGRGGGGGGGGRGGGGYGGGSGGYGGGGRGGSRGYGGGDGGYGG 125

Query: 122 GSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGGDRY 181
           G G GG   YGGGGGGYGGGG  GGGG GGG  CFKCGE+GH ARDC QSG  GGGG R+
Sbjct: 126 GGGYGGGSRYGGGGGGYGGGGGYGGGGSGGGSGCFKCGESGHFARDCSQSGG-GGGGGRF 185

Query: 182 GGGGGGGGGGGNCYSCGESGHFARECPSSGR 213
           GGGGGGGGGGG CY CGE GHFAREC S GR
Sbjct: 186 GGGGGGGGGGG-CYKCGEDGHFARECTSGGR 214

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BLAST of CsGy7G000700 vs. ExPASy Swiss-Prot
Match: Q38896 (Cold shock domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=CSP4 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.3e-39
Identity = 130/215 (60.47%), Postives = 147/215 (68.37%), Query Frame = 0


Query: 2   GERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDG 61
           G+R  G VKWF  QKG+GFI+P+DGG+DLFVHQSSIRS+GFRSL   E VEF +E ++ G
Sbjct: 12  GDRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSG 71

Query: 62  RSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSSGGGYGGGGGGGRGRRGGGGYGFNG 121
           R KA++V+GP  A VQG+ GGGG  GG GG GG       GGG GGG   RGGG Y    
Sbjct: 72  RPKAIEVSGPDGAPVQGNSGGGGSSGGRGGFGG-------GGGRGGG---RGGGSY---- 131

Query: 122 GSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSG---SQGGGG 181
                        GGGYGG G GG GGGGG  +CFKCGE GHMAR+C Q G   S GGGG
Sbjct: 132 -------------GGGYGGRGSGGRGGGGGDNSCFKCGEPGHMARECSQGGGGYSGGGGG 191

Query: 182 DRYGGGGGGGGGGG--NCYSCGESGHFARECPSSG 212
            RYG GGGGGGGGG  +CYSCGESGHFAR+C S G
Sbjct: 192 GRYGSGGGGGGGGGGLSCYSCGESGHFARDCTSGG 199

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BLAST of CsGy7G000700 vs. ExPASy Swiss-Prot
Match: Q41188 (Cold shock protein 2 OS=Arabidopsis thaliana OX=3702 GN=CSP2 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 4.3e-38
Identity = 130/226 (57.52%), Postives = 147/226 (65.04%), Query Frame = 0


Query: 2   GERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDG 61
           GER  G VKWF  QKG+GFI+P+DGG+DLFVHQSSIRS+GFRSL   E VEF +E +++ 
Sbjct: 8   GERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEIDNNN 67

Query: 62  RSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSSGGGYGGGGGGGRGRRGGGGYGFNG 121
           R KA+DV+GP  A VQG+ GGG  GG           GG+GGG GGGR            
Sbjct: 68  RPKAIDVSGPDGAPVQGNSGGGSSGG----------RGGFGGGRGGGR------------ 127

Query: 122 GSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQ----------- 181
           GSG    GGYGGGGGGYG    G GGGG GG  C+KCGE GHMARDC +           
Sbjct: 128 GSG----GGYGGGGGGYG----GRGGGGRGGSDCYKCGEPGHMARDCSEGGGGYGGGGGG 187

Query: 182 ---SGSQGGGGDRYGGGG-GGGGGGGNCYSCGESGHFARECPSSGR 213
               G  GGGG  YGGGG GGGGGGG+CYSCGESGHFAR+C S GR
Sbjct: 188 YGGGGGYGGGGGGYGGGGRGGGGGGGSCYSCGESGHFARDCTSGGR 203

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BLAST of CsGy7G000700 vs. ExPASy Swiss-Prot
Match: Q94C69 (Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.8e-18
Identity = 115/217 (53.00%), Postives = 133/217 (61.29%), Query Frame = 0


Query: 4   RVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRS 63
           R  GKV WFSD KGYGFI+P+DGGE+LFVHQSSI SDGFRSL +GE VE+ I   SDG++
Sbjct: 10  RSIGKVSWFSDGKGYGFITPDDGGEELFVHQSSIVSDGFRSLTLGESVEYEIALGSDGKT 69

Query: 64  KAVDVTGPGEASV----QGSRGGGGGGGGAGGGGGYSS--GGGYGG---GGGGGRGRRGG 123
           KA++VT PG  S+      SRG GG     G  G  +    GG GG   GGGGGR R GG
Sbjct: 70  KAIEVTAPGGGSLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGGGGGR-RSGG 129

Query: 124 GGYGFNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQ 183
            G  +  G  G         GGG        GGGGGGG  C+ CGE GH+A+DC      
Sbjct: 130 EGECYMCGDVGHFARDCRQSGGG------NSGGGGGGGRPCYSCGEVGHLAKDC----RG 189

Query: 184 GGGGDRYGGGGGGGGGGGNCYSCGESGHFARECPSSG 212
           G GG+RYGGGGG G GG  CY CG  GHFAR+C  +G
Sbjct: 190 GSGGNRYGGGGGRGSGGDGCYMCGGVGHFARDCRQNG 215

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BLAST of CsGy7G000700 vs. ExPASy Swiss-Prot
Match: O65639 (Cold shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=CSP1 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.9e-10
Identity = 104/215 (48.37%), Postives = 125/215 (58.14%), Query Frame = 0


Query: 4   RVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRS 63
           R +GKV WF+  KGYGFI+P+DG  +LFVHQSSI S+G+RSL VG+ VEF I   SDG++
Sbjct: 10  RSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGKT 69

Query: 64  KAVDVTGPGEASVQ---GSRGGGGGGGGAGGG-------GGYSSGGGYGGGGGGGRGR-R 123
           KAV+VT PG  S++    SRG G   GG G G       G  S   G GGGGGGG  R R
Sbjct: 70  KAVNVTAPGGGSLKKENNSRGNGARRGGGGSGCYNCGELGHISKDCGIGGGGGGGERRSR 129

Query: 124 GGGGYGFNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSG 183
           GG G    G +G   R     G G   G   GG  G      C+ CG+ GH+ARDC Q  
Sbjct: 130 GGEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDG------CYTCGDVGHVARDCTQKS 189

Query: 184 SQGGGGDRYGGGGGGGGGGGNCYSCGESGHFAREC 208
              G GD+ G   GG  G   CY+CG+ GHFAR+C
Sbjct: 190 V--GNGDQRGAVKGGNDG---CYTCGDVGHFARDC 213

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BLAST of CsGy7G000700 vs. NCBI nr
Match: XP_011658593.1 (glycine-rich protein 2 [Cucumis sativus] >KGN43237.1 hypothetical protein Csa_020571 [Cucumis sativus])

HSP 1 Score: 341 bits (874), Expect = 9.93e-117
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MGERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 60
           MGERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD
Sbjct: 1   MGERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 60

Query: 61  GRSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSSGGGYGGGGGGGRGRRGGGGYGFN 120
           GRSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSSGGGYGGGGGGGRGRRGGGGYGFN
Sbjct: 61  GRSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSSGGGYGGGGGGGRGRRGGGGYGFN 120

Query: 121 GGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGGDR 180
           GGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGGDR
Sbjct: 121 GGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGGDR 180

Query: 181 YGGGGGGGGGGGNCYSCGESGHFARECPSSGR 212
           YGGGGGGGGGGGNCYSCGESGHFARECPSSGR
Sbjct: 181 YGGGGGGGGGGGNCYSCGESGHFARECPSSGR 212

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BLAST of CsGy7G000700 vs. NCBI nr
Match: XP_038888820.1 (glycine-rich protein 2-like [Benincasa hispida])

HSP 1 Score: 308 bits (790), Expect = 4.67e-104
Identity = 201/213 (94.37%), Postives = 202/213 (94.84%), Query Frame = 0


Query: 1   MGERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 60
           M ERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD
Sbjct: 1   MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 60

Query: 61  GRSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSSGGG-YGGGGGGGRGRRGGGGYGF 120
           GRSKAVDVTGPGEASVQGSRGGG     +GGGGGYSSGGG YGGGGGGGRGRRGGGGYGF
Sbjct: 61  GRSKAVDVTGPGEASVQGSRGGG-----SGGGGGYSSGGGGYGGGGGGGRGRRGGGGYGF 120

Query: 121 NGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGGD 180
           NGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGG D
Sbjct: 121 NGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGG-D 180

Query: 181 RYGGGGGGGGGGGNCYSCGESGHFARECPSSGR 212
           RYGGGGGGGG   NCYSCGESGHFARECPSSGR
Sbjct: 181 RYGGGGGGGG---NCYSCGESGHFARECPSSGR 204

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BLAST of CsGy7G000700 vs. NCBI nr
Match: XP_008448117.2 (PREDICTED: LOW QUALITY PROTEIN: glycine-rich protein 2-like, partial [Cucumis melo])

HSP 1 Score: 288 bits (737), Expect = 3.87e-96
Identity = 193/201 (96.02%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 12  FSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGP 71
           FSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGP
Sbjct: 1   FSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGP 60

Query: 72  GEASVQGSRGGGGGGGGAGGGGGYSSGGGYGGGGGGGRGRRGGGGYGFNGGSGGGGRGGY 131
           GEASVQGSRGGGGGGGG GGGGGYSSGGGYGGGGGGGRG RGGGGYGFNGGSGGGGRGGY
Sbjct: 61  GEASVQGSRGGGGGGGG-GGGGGYSSGGGYGGGGGGGRGXRGGGGYGFNGGSGGGGRGGY 120

Query: 132 GGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGGDRYGGGGGGGGGG 191
           GGGGGGYGGGGYG GGGGGGGGACFKCGETGHMARDCYQSGSQGGG DRYGGGGGGG   
Sbjct: 121 GGGGGGYGGGGYG-GGGGGGGGACFKCGETGHMARDCYQSGSQGGG-DRYGGGGGGG--- 180

Query: 192 GNCYSCGESGHFARECPSSGR 212
            NCYSCGESGHFARECPSSGR
Sbjct: 181 -NCYSCGESGHFARECPSSGR 194

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BLAST of CsGy7G000700 vs. NCBI nr
Match: XP_022989065.1 (glycine-rich protein 2-like [Cucurbita maxima])

HSP 1 Score: 278 bits (711), Expect = 5.47e-92
Identity = 191/216 (88.43%), Postives = 196/216 (90.74%), Query Frame = 0


Query: 1   MGERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 60
           MGERVSGKVKWFSDQKGYGFISPN+GGEDLFVHQSSIRS+GFRSLGVGEDVEF IEAE+D
Sbjct: 1   MGERVSGKVKWFSDQKGYGFISPNEGGEDLFVHQSSIRSEGFRSLGVGEDVEFQIEAEAD 60

Query: 61  GRSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSSGGGYG-GGGGGGRGRRGGGGYGF 120
           GRSKAVDVTGPGE+SVQGSRGGGGGGGG+     Y  GGG G GGGGGGRGRRGG  YGF
Sbjct: 61  GRSKAVDVTGPGESSVQGSRGGGGGGGGS-----YGGGGGGGYGGGGGGRGRRGG--YGF 120

Query: 121 NGGSGGGGRGGYGG-GGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGG 180
           NGGSGGGGRG YGG GGGGYGGG YG GGGGGGGGACFKCGE GHMARDCYQSGSQGGG 
Sbjct: 121 NGGSGGGGRGLYGGSGGGGYGGG-YGSGGGGGGGGACFKCGEAGHMARDCYQSGSQGGG- 180

Query: 181 DRY--GGGGGGGGGGGNCYSCGESGHFARECPSSGR 212
           DRY  GGGGGGGGGGGNCYSCGESGHFARECPSSGR
Sbjct: 181 DRYSGGGGGGGGGGGGNCYSCGESGHFARECPSSGR 207

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BLAST of CsGy7G000700 vs. NCBI nr
Match: XP_022928350.1 (glycine-rich protein 2-like [Cucurbita moschata] >KAG6589006.1 Cold shock domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015270.1 Cold shock domain-containing protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 272 bits (695), Expect = 1.25e-89
Identity = 185/216 (85.65%), Postives = 190/216 (87.96%), Query Frame = 0


Query: 1   MGERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 60
           MGERVSGKVKWFSDQKGYGFISPN+GGEDLFVHQSSIRS+GFRSLGVGEDVEF IEAE+D
Sbjct: 1   MGERVSGKVKWFSDQKGYGFISPNEGGEDLFVHQSSIRSEGFRSLGVGEDVEFQIEAEAD 60

Query: 61  GRSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSSGGGYG-GGGGGGRGRRGGGGYGF 120
           GRSKAVDVTGPGE+SVQGSRGGGGGGGG+     Y  GGG G GGGGGGRGRRGG  YGF
Sbjct: 61  GRSKAVDVTGPGESSVQGSRGGGGGGGGS-----YGGGGGGGYGGGGGGRGRRGG--YGF 120

Query: 121 NGGSGGGGRGGYGGGGGGYGGGGYGGG---GGGGGGGACFKCGETGHMARDCYQSGSQGG 180
           NGGSGGGGRG Y    GG GGGGYGGG   GGGGGGGACFKCGE GHMARDCYQSGSQGG
Sbjct: 121 NGGSGGGGRGSY----GGSGGGGYGGGYGSGGGGGGGACFKCGEAGHMARDCYQSGSQGG 180

Query: 181 GGDRYGGGGGGGGGGGNCYSCGESGHFARECPSSGR 212
           G DRY GGGGGGGG  NCYSCGESGHFARECPSSGR
Sbjct: 181 G-DRYSGGGGGGGG--NCYSCGESGHFARECPSSGR 202

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BLAST of CsGy7G000700 vs. ExPASy TrEMBL
Match: A0A0A0K4M5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G010300 PE=4 SV=1)

HSP 1 Score: 341 bits (874), Expect = 4.81e-117
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MGERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 60
           MGERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD
Sbjct: 1   MGERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 60

Query: 61  GRSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSSGGGYGGGGGGGRGRRGGGGYGFN 120
           GRSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSSGGGYGGGGGGGRGRRGGGGYGFN
Sbjct: 61  GRSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSSGGGYGGGGGGGRGRRGGGGYGFN 120

Query: 121 GGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGGDR 180
           GGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGGDR
Sbjct: 121 GGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGGDR 180

Query: 181 YGGGGGGGGGGGNCYSCGESGHFARECPSSGR 212
           YGGGGGGGGGGGNCYSCGESGHFARECPSSGR
Sbjct: 181 YGGGGGGGGGGGNCYSCGESGHFARECPSSGR 212

[Close]

BLAST of CsGy7G000700 vs. ExPASy TrEMBL
Match: A0A1S3BIY4 (LOW QUALITY PROTEIN: glycine-rich protein 2-like OS=Cucumis melo OX=3656 GN=LOC103490405 PE=4 SV=1)

HSP 1 Score: 288 bits (737), Expect = 1.87e-96
Identity = 193/201 (96.02%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 12  FSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGP 71
           FSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGP
Sbjct: 1   FSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGP 60

Query: 72  GEASVQGSRGGGGGGGGAGGGGGYSSGGGYGGGGGGGRGRRGGGGYGFNGGSGGGGRGGY 131
           GEASVQGSRGGGGGGGG GGGGGYSSGGGYGGGGGGGRG RGGGGYGFNGGSGGGGRGGY
Sbjct: 61  GEASVQGSRGGGGGGGG-GGGGGYSSGGGYGGGGGGGRGXRGGGGYGFNGGSGGGGRGGY 120

Query: 132 GGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGGDRYGGGGGGGGGG 191
           GGGGGGYGGGGYG GGGGGGGGACFKCGETGHMARDCYQSGSQGGG DRYGGGGGGG   
Sbjct: 121 GGGGGGYGGGGYG-GGGGGGGGACFKCGETGHMARDCYQSGSQGGG-DRYGGGGGGG--- 180

Query: 192 GNCYSCGESGHFARECPSSGR 212
            NCYSCGESGHFARECPSSGR
Sbjct: 181 -NCYSCGESGHFARECPSSGR 194

[Close]

BLAST of CsGy7G000700 vs. ExPASy TrEMBL
Match: A0A6J1JLC0 (glycine-rich protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486249 PE=4 SV=1)

HSP 1 Score: 278 bits (711), Expect = 2.65e-92
Identity = 191/216 (88.43%), Postives = 196/216 (90.74%), Query Frame = 0


Query: 1   MGERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 60
           MGERVSGKVKWFSDQKGYGFISPN+GGEDLFVHQSSIRS+GFRSLGVGEDVEF IEAE+D
Sbjct: 1   MGERVSGKVKWFSDQKGYGFISPNEGGEDLFVHQSSIRSEGFRSLGVGEDVEFQIEAEAD 60

Query: 61  GRSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSSGGGYG-GGGGGGRGRRGGGGYGF 120
           GRSKAVDVTGPGE+SVQGSRGGGGGGGG+     Y  GGG G GGGGGGRGRRGG  YGF
Sbjct: 61  GRSKAVDVTGPGESSVQGSRGGGGGGGGS-----YGGGGGGGYGGGGGGRGRRGG--YGF 120

Query: 121 NGGSGGGGRGGYGG-GGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGG 180
           NGGSGGGGRG YGG GGGGYGGG YG GGGGGGGGACFKCGE GHMARDCYQSGSQGGG 
Sbjct: 121 NGGSGGGGRGLYGGSGGGGYGGG-YGSGGGGGGGGACFKCGEAGHMARDCYQSGSQGGG- 180

Query: 181 DRY--GGGGGGGGGGGNCYSCGESGHFARECPSSGR 212
           DRY  GGGGGGGGGGGNCYSCGESGHFARECPSSGR
Sbjct: 181 DRYSGGGGGGGGGGGGNCYSCGESGHFARECPSSGR 207

[Close]

BLAST of CsGy7G000700 vs. ExPASy TrEMBL
Match: A0A6J1ERG9 (glycine-rich protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111435206 PE=4 SV=1)

HSP 1 Score: 272 bits (695), Expect = 6.06e-90
Identity = 185/216 (85.65%), Postives = 190/216 (87.96%), Query Frame = 0


Query: 1   MGERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 60
           MGERVSGKVKWFSDQKGYGFISPN+GGEDLFVHQSSIRS+GFRSLGVGEDVEF IEAE+D
Sbjct: 1   MGERVSGKVKWFSDQKGYGFISPNEGGEDLFVHQSSIRSEGFRSLGVGEDVEFQIEAEAD 60

Query: 61  GRSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSSGGGYG-GGGGGGRGRRGGGGYGF 120
           GRSKAVDVTGPGE+SVQGSRGGGGGGGG+     Y  GGG G GGGGGGRGRRGG  YGF
Sbjct: 61  GRSKAVDVTGPGESSVQGSRGGGGGGGGS-----YGGGGGGGYGGGGGGRGRRGG--YGF 120

Query: 121 NGGSGGGGRGGYGGGGGGYGGGGYGGG---GGGGGGGACFKCGETGHMARDCYQSGSQGG 180
           NGGSGGGGRG Y    GG GGGGYGGG   GGGGGGGACFKCGE GHMARDCYQSGSQGG
Sbjct: 121 NGGSGGGGRGSY----GGSGGGGYGGGYGSGGGGGGGACFKCGEAGHMARDCYQSGSQGG 180

Query: 181 GGDRYGGGGGGGGGGGNCYSCGESGHFARECPSSGR 212
           G DRY GGGGGGGG  NCYSCGESGHFARECPSSGR
Sbjct: 181 G-DRYSGGGGGGGG--NCYSCGESGHFARECPSSGR 202

[Close]

BLAST of CsGy7G000700 vs. ExPASy TrEMBL
Match: A0A6J1HY03 (glycine-rich protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468487 PE=4 SV=1)

HSP 1 Score: 252 bits (644), Expect = 2.09e-82
Identity = 172/214 (80.37%), Postives = 176/214 (82.24%), Query Frame = 0


Query: 1   MGERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 60
           M ERVSGKVKWFSDQKGYGFISPN+GGEDLFVHQSSIRSDGFRSLGVGEDVEFLIE E+D
Sbjct: 1   MSERVSGKVKWFSDQKGYGFISPNEGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEPEAD 60

Query: 61  GRSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSSGGGYGGGGGGGRGRRGGGGYGFN 120
           GR KAVDVTGPGE+SVQGSRGGGGGG                      RG RGGG YGFN
Sbjct: 61  GRCKAVDVTGPGESSVQGSRGGGGGGE---------------------RGSRGGG-YGFN 120

Query: 121 GGSGGGG-RGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGGD 180
           GG GGGG RGGYG GGGGYGGG YGGGGGGGG   CFKCGETGHMARDCYQ GSQGGG D
Sbjct: 121 GGGGGGGGRGGYGRGGGGYGGG-YGGGGGGGG---CFKCGETGHMARDCYQGGSQGGG-D 180

Query: 181 RYGGGGGGGGGGG-NCYSCGESGHFARECPSSGR 212
           RYGGGGGGGGGGG NCYSCGESGHFAR+C SSGR
Sbjct: 181 RYGGGGGGGGGGGGNCYSCGESGHFARDCQSSGR 187

[Close]

BLAST of CsGy7G000700 vs. TAIR 10
Match: AT2G21060.1 (glycine-rich protein 2B )

HSP 1 Score: 163.7 bits (413), Expect = 1.6e-40
Identity = 130/215 (60.47%), Postives = 147/215 (68.37%), Query Frame = 0


Query: 2   GERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDG 61
           G+R  G VKWF  QKG+GFI+P+DGG+DLFVHQSSIRS+GFRSL   E VEF +E ++ G
Sbjct: 12  GDRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSG 71

Query: 62  RSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSSGGGYGGGGGGGRGRRGGGGYGFNG 121
           R KA++V+GP  A VQG+ GGGG  GG GG GG       GGG GGG   RGGG Y    
Sbjct: 72  RPKAIEVSGPDGAPVQGNSGGGGSSGGRGGFGG-------GGGRGGG---RGGGSY---- 131

Query: 122 GSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSG---SQGGGG 181
                        GGGYGG G GG GGGGG  +CFKCGE GHMAR+C Q G   S GGGG
Sbjct: 132 -------------GGGYGGRGSGGRGGGGGDNSCFKCGEPGHMARECSQGGGGYSGGGGG 191

Query: 182 DRYGGGGGGGGGGG--NCYSCGESGHFARECPSSG 212
            RYG GGGGGGGGG  +CYSCGESGHFAR+C S G
Sbjct: 192 GRYGSGGGGGGGGGGLSCYSCGESGHFARDCTSGG 199

[Close]

BLAST of CsGy7G000700 vs. TAIR 10
Match: AT4G38680.1 (glycine rich protein 2 )

HSP 1 Score: 159.5 bits (402), Expect = 3.1e-39
Identity = 130/226 (57.52%), Postives = 147/226 (65.04%), Query Frame = 0


Query: 2   GERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDG 61
           GER  G VKWF  QKG+GFI+P+DGG+DLFVHQSSIRS+GFRSL   E VEF +E +++ 
Sbjct: 8   GERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEIDNNN 67

Query: 62  RSKAVDVTGPGEASVQGSRGGGGGGGGAGGGGGYSSGGGYGGGGGGGRGRRGGGGYGFNG 121
           R KA+DV+GP  A VQG+ GGG  GG           GG+GGG GGGR            
Sbjct: 68  RPKAIDVSGPDGAPVQGNSGGGSSGG----------RGGFGGGRGGGR------------ 127

Query: 122 GSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQ----------- 181
           GSG    GGYGGGGGGYG    G GGGG GG  C+KCGE GHMARDC +           
Sbjct: 128 GSG----GGYGGGGGGYG----GRGGGGRGGSDCYKCGEPGHMARDCSEGGGGYGGGGGG 187

Query: 182 ---SGSQGGGGDRYGGGG-GGGGGGGNCYSCGESGHFARECPSSGR 213
               G  GGGG  YGGGG GGGGGGG+CYSCGESGHFAR+C S GR
Sbjct: 188 YGGGGGYGGGGGGYGGGGRGGGGGGGSCYSCGESGHFARDCTSGGR 203

[Close]

BLAST of CsGy7G000700 vs. TAIR 10
Match: AT2G17870.1 (cold shock domain protein 3 )

HSP 1 Score: 93.2 bits (230), Expect = 2.7e-19
Identity = 115/217 (53.00%), Postives = 133/217 (61.29%), Query Frame = 0


Query: 4   RVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRS 63
           R  GKV WFSD KGYGFI+P+DGGE+LFVHQSSI SDGFRSL +GE VE+ I   SDG++
Sbjct: 10  RSIGKVSWFSDGKGYGFITPDDGGEELFVHQSSIVSDGFRSLTLGESVEYEIALGSDGKT 69

Query: 64  KAVDVTGPGEASV----QGSRGGGGGGGGAGGGGGYSS--GGGYGG---GGGGGRGRRGG 123
           KA++VT PG  S+      SRG GG     G  G  +    GG GG   GGGGGR R GG
Sbjct: 70  KAIEVTAPGGGSLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGGGGGR-RSGG 129

Query: 124 GGYGFNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQ 183
            G  +  G  G         GGG        GGGGGGG  C+ CGE GH+A+DC      
Sbjct: 130 EGECYMCGDVGHFARDCRQSGGG------NSGGGGGGGRPCYSCGEVGHLAKDC----RG 189

Query: 184 GGGGDRYGGGGGGGGGGGNCYSCGESGHFARECPSSG 212
           G GG+RYGGGGG G GG  CY CG  GHFAR+C  +G
Sbjct: 190 GSGGNRYGGGGGRGSGGDGCYMCGGVGHFARDCRQNG 215

[Close]

BLAST of CsGy7G000700 vs. TAIR 10
Match: AT4G36020.1 (cold shock domain protein 1 )

HSP 1 Score: 67.0 bits (162), Expect = 2.1e-11
Identity = 104/215 (48.37%), Postives = 125/215 (58.14%), Query Frame = 0


Query: 4   RVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRS 63
           R +GKV WF+  KGYGFI+P+DG  +LFVHQSSI S+G+RSL VG+ VEF I   SDG++
Sbjct: 10  RSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGKT 69

Query: 64  KAVDVTGPGEASVQ---GSRGGGGGGGGAGGG-------GGYSSGGGYGGGGGGGRGR-R 123
           KAV+VT PG  S++    SRG G   GG G G       G  S   G GGGGGGG  R R
Sbjct: 70  KAVNVTAPGGGSLKKENNSRGNGARRGGGGSGCYNCGELGHISKDCGIGGGGGGGERRSR 129

Query: 124 GGGGYGFNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSG 183
           GG G    G +G   R     G G   G   GG  G      C+ CG+ GH+ARDC Q  
Sbjct: 130 GGEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDG------CYTCGDVGHVARDCTQKS 189

Query: 184 SQGGGGDRYGGGGGGGGGGGNCYSCGESGHFAREC 208
              G GD+ G   GG  G   CY+CG+ GHFAR+C
Sbjct: 190 V--GNGDQRGAVKGGNDG---CYTCGDVGHFARDC 213

The following BLAST results are available for this feature:

BLAST of CsGy7G000700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27484	4.9e-50	72.04	Glycine-rich protein 2 OS=Nicotiana sylvestris OX=4096 GN=GRP-2 PE=2 SV=1	[more]
Q38896	2.3e-39	60.47	Cold shock domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=CSP4 P...	[more]
Q41188	4.3e-38	57.52	Cold shock protein 2 OS=Arabidopsis thaliana OX=3702 GN=CSP2 PE=1 SV=1	[more]
Q94C69	3.8e-18	53.00	Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 P...	[more]
O65639	2.9e-10	48.37	Cold shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=CSP1 PE=1 SV=1	[more]

BLAST of CsGy7G000700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658593.1	9.93e-117	100.00	glycine-rich protein 2 [Cucumis sativus] >KGN43237.1 hypothetical protein Csa_02...	[more]
XP_038888820.1	4.67e-104	94.37	glycine-rich protein 2-like [Benincasa hispida]	[more]
XP_008448117.2	3.87e-96	96.02	PREDICTED: LOW QUALITY PROTEIN: glycine-rich protein 2-like, partial [Cucumis me...	[more]
XP_022989065.1	5.47e-92	88.43	glycine-rich protein 2-like [Cucurbita maxima]	[more]
XP_022928350.1	1.25e-89	85.65	glycine-rich protein 2-like [Cucurbita moschata] >KAG6589006.1 Cold shock domain...	[more]

BLAST of CsGy7G000700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4M5	4.81e-117	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G010300 PE=4 SV=1	[more]
A0A1S3BIY4	1.87e-96	96.02	LOW QUALITY PROTEIN: glycine-rich protein 2-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1JLC0	2.65e-92	88.43	glycine-rich protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486249 PE=4 SV=...	[more]
A0A6J1ERG9	6.06e-90	85.65	glycine-rich protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111435206 PE=4 S...	[more]
A0A6J1HY03	2.09e-82	80.37	glycine-rich protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468487 PE=4 SV=...	[more]

BLAST of CsGy7G000700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21060.1	1.6e-40	60.47	glycine-rich protein 2B	[more]
AT4G38680.1	3.1e-39	57.52	glycine rich protein 2	[more]
AT2G17870.1	2.7e-19	53.00	cold shock domain protein 3	[more]
AT4G36020.1	2.1e-11	48.37	cold shock domain protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002059	Cold-shock protein, DNA-binding	PRINTS	PR00050	COLDSHOCK	coord: 7..22 score: 63.69 coord: 28..37 score: 64.04 coord: 43..61 score: 40.8
IPR002059	Cold-shock protein, DNA-binding	PFAM	PF00313	CSD	coord: 6..70 e-value: 1.4E-24 score: 85.7
IPR002059	Cold-shock protein, DNA-binding	PROSITE	PS51857	CSD_2	coord: 4..70 score: 31.374826
IPR002059	Cold-shock protein, DNA-binding	CDD	cd04458	CSP_CDS	coord: 5..70 e-value: 8.10346E-26 score: 93.0269
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 193..209 e-value: 2.2E-5 score: 33.9 coord: 154..170 e-value: 1.4E-5 score: 34.5
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 154..168 e-value: 2.5E-7 score: 30.5 coord: 193..209 e-value: 1.6E-7 score: 31.1
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 194..209 score: 11.284516
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 155..168 score: 11.053757
IPR011129	Cold shock domain	SMART	SM00357	csp_8	coord: 6..71 e-value: 6.1E-23 score: 92.2
None	No IPR available	GENE3D	4.10.60.10		coord: 189..212 e-value: 4.1E-7 score: 31.5 coord: 150..178 e-value: 2.4E-7 score: 32.3
None	No IPR available	GENE3D	2.40.50.140		coord: 2..81 e-value: 1.0E-27 score: 98.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..89
None	No IPR available	PANTHER	PTHR46565:SF8	COLD SHOCK PROTEIN 2	coord: 121..212 coord: 1..114
None	No IPR available	PANTHER	PTHR46565	COLD SHOCK DOMAIN PROTEIN 2	coord: 121..212 coord: 1..114
IPR019844	Cold-shock (CSD) domain	PROSITE	PS00352	CSD_1	coord: 18..37
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 3..70
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 145..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G000700.2	CsGy7G000700.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding