CsGy7G000360 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTATTTTCGGGTTTCCAAATCCGCAAAATCGGACGCTCATCATCCAAACCGATCAAAACTCTCTCCCCTTCGTTCTTCCTCCCATCGTCGATCGTTTCATCGGCGACTCATCGCTCCCTTCTGGTACGTTTGCATTCGCATTCTGACTTGTGGTTTTTTCATTCGAGGTTTATCTTGGTTGATCGTTTTGAGATGTTACTCTGGTTGTTTTGCTTGCTCAGAAAGCTGACTGACCGGAACTTTGAATTTTCATTATCTTCCCATTCTTCTCATCTGGATATGTGCATTCATTTGTTAGTTAACTTATTTACTGTTCCGTTGATGGGAAGATGTTAGTTACCTGCGGCCAATGAAAGATAAACGTAGCAACTTGATTGATTGATTATCTTTGGTGTTCTGATTTTTCTTCTTCTTCATATTCTTATTGTTTGCCTTGTTTTATGTATTTCTGTCTACCTGTTATTTCATGTTTGATATAGGGGAACTGAGGATTTGCTGTCTATTTATGTACTTTTTTCTGCTGTTTTGGTGATGAATCAGTTTTATGCGCTTGGTGTCCTTTAGTCACTACGCTGTATAAACGTAGCAACTTGATTGATTGATTATCTTTGGTGTTCTGATTTTTCTTCTTCTTCATATTCTTATTGTTTTCCTTGTTTTATGTATTTCTGTCTAGCTGTTATTTCATGTTTGATATAGGGGAACTGAGGATTTGTTGTCTATCTATGTACTTTTTTATGCTGTTTTGGTGATGAATCAGTTTTATGCGCTTGGTGTCCTTTAGTCACTACGCTGTATAAATGGAATTGTGCATTAGCGATTTATTGCTTGACTTTAAGGTTTATGATTATGATACCGTAGTTTTCAAGCATTTGGTTTTCTTACATATCGTACAACATGCAGTTCTTCACCACTCGATTTGGAGCCTTTAGGAGGTTGATTAACCGTCGAGGCACTCTATACAGGCTGTACAAAATGGTATGAATTATTTTCTCAGCTTGTTCTAATGAATACCTTTGATGTTTTTTTTGTGAAACTGCATTCGATTCTTGCATTGCCCGTGTGATGAGAAAATGAAGAAAAGGCATGTAGTATGTGTTTTAGACGTGAGGTGGAGTTGAATTGATTGATCTTACGGAAGGTTCTGCTGTCCCCCAATTTAATAAATTACTGATTTCTTCTTTCTTGTCATGTACATTACTGCTTTTTTGTTAATCCTTGACCTTAAGATCTTGTGCTTCTTCTGGCTATGGAACACGAAACCTGCTGAACAAATATTTGCATAGGATTTATTATGTTGCATATTTACTTTTCCAACCTAAAACCTTTTACTTAATACCTTATACGATGTAAGAGCGATCAGGGAACTTCTTTTTTAAGAATATATTTTCATTTTGTACATCTCTGATCTCACCTGGTCAAAGCAGTTTGTCACTTGTATGATAAACTAAATTTGAGAACATAATGTTTGGGATGTTTTCAATCAATTCAAACCTCGAGGGAGAATTTTACTTTCGTTGTAGATTCCTCTGGTCATGTCCAAGTTGTTATGGTTTTTTCAATACATCAGCCTCCAGTTCCCCATTTTAGGAGGGTTCTTAATGTGAAAAGTTATGTACATTTTTCTGAAAAGAAATTGGTTAGTTTTTGTAGTTATTACAATTCACGCTATCTCTATGTTTCTACATCTGCAGTATTTTGATGGGTATGGATATCGTGGAACATCATTTGAGCAAAGTTATCAATGTTTCTCTACATCATTTATTGATAAGGTTTGATTTCCTTCTATATTTATTTGTCATTTTTAGAAGTGTGCTCAAATGTTGATTAGTGTTTGGGGTGTTCCTTGTTTTGTTTTGCATGCATGACAAAGGCCTTCTTCATGCTAGATAACTAAATGTAGGCAGCCTTGTGATACTTGTCTTTGTTTGAAGTTTCAACATGGATCAACCATTGCTCTTGCATTATTATTTGTCATTTTCTTTTTGTGTGTCGCTCTTGGAATTTCATGTAATCTCAAGAAACTGCTGCGGACATCTCTAATTTGTAGGCGAAAGAAAATATATATTGGAATGTTGCTCTTTGTTATAAAGAACTTTAAAGCATCCATGTTTGCACGCATAAAATTGAATTGTTTTCTTATTCCCAAAATAGTTAATTTCTTCTAATCCCAGTTAATTTTTTCATACTGCAGCCACACCTTGAAACTGGAGATAGAAGTAAGATGTTCAGTCTTCACCCTTTTTACGTTTTAGGTTTCTGTTCCTTTTTCAACATATTTTTCAACTTCATATTCATAGTTTCTCATGTTGTTTATTTCAATTTTGATTTTCAGTTATAATGCCTCCATCAGCCCTTGATCGCCTTGGTTTGTTGGCATACTCTTAAAAATTGTTTTTGTTCTCCTATTTTTTCCTCTGTTCTTTTCATCATAGGTGACTGATTTAAACTTAACACCCTGCAGCTTCATTACAAATTGATTATCCAATGTTATTTGAGCTACGAAATGATGCTGTTGAGCGAGTATCTCATTGTGGGGTTTTGGAGTTTGTTGCAGAAGAAGGCATGATTTACATGCCTTATTGGGTAGGGTTCCATATTTCTCTTGTGTGATACATGTCCTAGGTGTTAGTAGCTCTGTTTTATGTTTTGTCCTAGAACACTTCCGTTCTAATTGTTACCCTTTTAGATGATGGAGAACATGGTTTTACAAGAAGGAGACCTAGTGCGAGTGAAGAATGTCACCCTTCCAAAGGGAACCTATGTTAAATTACAACCTCACACAAAGGACTTTTTGGATATCTCAAATCCCAAAGCAATGTAAGATAGTTCTTCAACTTTCTCCACTTATTTGTATTTACAGCTGAGGTCACAGGAAGGAGTTCTAATTTGAAATCCTTGATTGTTTTCTTACTTAATTTGAAGATGAGCTCTTTAACCTACATTAATTTAGCCGCTACCACCTATAGCCTGCATGGAAGAACTTTTGGATCCGAAGACATCATTTGTTGCTTGATGAAAGTTATATTGAAAAAAATTTATGGTCAATATCAAATTGTTCATGCTTGACTTCATAGGTGATAAGATAAATTTGGACGCTGATTTTCTTATTAAAGAATGGAGAAGTATGTCTGTGCATGATAGTTAAGGAAGTGTTAAATGTTAGAACATTGCTCTCAAACACATTTTTGAACTCATCCAAGGGATGATAAGGGTGTGGAATTTCCTTTATGGGTGATATGCCCTTGTAATAAATATCGTAGTTCCTGTGATGAAGTTTGTTTCACATGTCAGATTATTTGTCTTTGTCATGCAGCTTAGAGACAACACTTAGGAATTTCTCCTGCCTCACCACTGGAGACAGTATTATGGTGGCATATAACAACAAGAAATATTACATTGACATAGTCGAAACGAAGCCATCCAATGCAATAAGTATCATTGAGACAGATTGTGAGGTGGATTTTGCACCCCCCCTGGATTACAAAGAACCGGAGAAGCTTGTTGCACCAACAAAAGGGAAGGAACAAGGTTTCATCTTCTACTCCTTTTTGCTCAATTCTTGGTGCAGTTTGCTGATGATGTTAGTGTTTAGTGTTTAGTGTTTAGAGTTTAGGGTTTAGGTGTGTGTATTTTAAATCAGTTAAATAATAATGCTTGATTTTATTTTATTTATGCATATGAAGTTGGTGTTTTTTTCTAAATCAGCTTTGTAACCTGATTCTATAGAGAGTTTCTAGTTATTCAACGTTATAGGATTTAGCAATCTTGAGCCAAGGAGAATCATAAGGCCACCGTTTACTAGTTCTAGTTACTAATGATTGTGGAAGAGATGCATTTAGAAGCTGCGTGTGGGTAATCTTTCATATTCTAAATGAACTTTCTTGCAGTTGCAGAAGCTCCAGATTCCGAAGCTGAACCCAAATTTAGTGCTTTCACAGGAACAGGAAGACGTTTGGATGGTAAATCTTCAAATCACCAGCCTCAGCCAATTTCATCTTCTAGGTCAGCTGATGCGAAGCAATCGGGTGGTAGTAGTAGATATGGCCATGCACAACAGTCTGCTGGATCTTCTAGCTCAGTGAATGGAATTCGTCAGTCTCAGGGAAAGTTAGTATTTGGACAAAATGCTAATCGGAATCCTAAAGAGACTCCAAAGGTATACTCACTTTGCTCACAATCATCATCTTATTTAAACTTTTAAATTTGCGTTCAATAGATACTCTGTCTTTAAAAAATCTAGTTGGTTATTTTCAATTTTGTGCCTTACATGCCTTTGATATCTTTTATTTCAAGTCTAATAGAACCCAACATAATCCTATGCCTTTCCAATTTCGTGTTTTGTAAATCTGTGAATTTTAAAATACCTATTGAATCAAGGTTATTAGACATAAAATTATACCTATTGAATCAAGGTTATTAGACATAAAATTTAAAATTTAAAAATTAAAGAACGTACTTTTTAACTCATTTATCTATAATGCTATTTTTTTTGGTGTAAAAATTGCCAACCTCTTAAAGATCATAGGTTAGATTAGATTTTGTTGTTGCAAATTGGACCTATATTTTGTATTCCCTATTATATAAGGATCTCTGTACATTCTTTGGATATTTCATACATGAATGATTTTTTTCTAATTAGAAAAAGAGGGGTAGAAAGAGAGAAAAAGAGAAACGTAAAAAGAATTAAAAAACCTTAGAGACAACCCTCATTGTTCGAAGGCTACTAATACTTTTTAAACTTTTTAACAGCATTTATATTGATGAGAATTGATACAAGTTTCTTACTTTATCTAACTTGTAATTAGTTTGATTCATTTTTGTATATTTAAAAAACTAAATTTATTTATTTATTGTTTCAAAAAGAAGAAAAATAACAGAATCTGTTATGACATTTTGTAGGAGGCTTCAAAAGAGAGTAAAAAAGATGAGGCTGAAAAGGATAACCCAAAATTTCAACCATTTGCTGGGAAAAGGTACTCATTGAGAGGTTGATTGATTATCTAACATTTATTTACTTCAGTAGATATATATAGGAACCGTTCATTGTCTACAATATCTCATAGAACGAACTCACAATGTAGTTGAAATTATGCCATGCCATGCTATACCCCACTTTGTGTCTATAAATTTAT GTATTTTCGGGTTTCCAAATCCGCAAAATCGGACGCTCATCATCCAAACCGATCAAAACTCTCTCCCCTTCGTTCTTCCTCCCATCGTCGATCGTTTCATCGGCGACTCATCGCTCCCTTCTGTTCTTCACCACTCGATTTGGAGCCTTTAGGAGGTTGATTAACCGTCGAGGCACTCTATACAGGCTGTACAAAATGTATTTTGATGGGTATGGATATCGTGGAACATCATTTGAGCAAAGTTATCAATGTTTCTCTACATCATTTATTGATAAGCCACACCTTGAAACTGGAGATAGAATTATAATGCCTCCATCAGCCCTTGATCGCCTTGCTTCATTACAAATTGATTATCCAATGTTATTTGAGCTACGAAATGATGCTGTTGAGCGAGTATCTCATTGTGGGGTTTTGGAGTTTGTTGCAGAAGAAGGCATGATTTACATGCCTTATTGGATGATGGAGAACATGGTTTTACAAGAAGGAGACCTAGTGCGAGTGAAGAATGTCACCCTTCCAAAGGGAACCTATGTTAAATTACAACCTCACACAAAGGACTTTTTGGATATCTCAAATCCCAAAGCAATCTTAGAGACAACACTTAGGAATTTCTCCTGCCTCACCACTGGAGACAGTATTATGGTGGCATATAACAACAAGAAATATTACATTGACATAGTCGAAACGAAGCCATCCAATGCAATAAGTATCATTGAGACAGATTGTGAGGTGGATTTTGCACCCCCCCTGGATTACAAAGAACCGGAGAAGCTTGTTGCACCAACAAAAGGGAAGGAACAAGTTGCAGAAGCTCCAGATTCCGAAGCTGAACCCAAATTTAGTGCTTTCACAGGAACAGGAAGACGTTTGGATGGTAAATCTTCAAATCACCAGCCTCAGCCAATTTCATCTTCTAGGTCAGCTGATGCGAAGCAATCGGGTGGTAGTAGTAGATATGGCCATGCACAACAGTCTGCTGGATCTTCTAGCTCAGTGAATGGAATTCGTCAGTCTCAGGGAAAGTTAGTATTTGGACAAAATGCTAATCGGAATCCTAAAGAGACTCCAAAGGAGGCTTCAAAAGAGAGTAAAAAAGATGAGGCTGAAAAGGATAACCCAAAATTTCAACCATTTGCTGGGAAAAGGTACTCATTGAGAGGTTGATTGATTATCTAACATTTATTTACTTCAGTAGATATATATAGGAACCGTTCATTGTCTACAATATCTCATAGAACGAACTCACAATGTAGTTGAAATTATGCCATGCCATGCTATACCCCACTTTGTGTCTATAAATTTAT ATGTATTTTGATGGGTATGGATATCGTGGAACATCATTTGAGCAAAGTTATCAATGTTTCTCTACATCATTTATTGATAAGCCACACCTTGAAACTGGAGATAGAATTATAATGCCTCCATCAGCCCTTGATCGCCTTGCTTCATTACAAATTGATTATCCAATGTTATTTGAGCTACGAAATGATGCTGTTGAGCGAGTATCTCATTGTGGGGTTTTGGAGTTTGTTGCAGAAGAAGGCATGATTTACATGCCTTATTGGATGATGGAGAACATGGTTTTACAAGAAGGAGACCTAGTGCGAGTGAAGAATGTCACCCTTCCAAAGGGAACCTATGTTAAATTACAACCTCACACAAAGGACTTTTTGGATATCTCAAATCCCAAAGCAATCTTAGAGACAACACTTAGGAATTTCTCCTGCCTCACCACTGGAGACAGTATTATGGTGGCATATAACAACAAGAAATATTACATTGACATAGTCGAAACGAAGCCATCCAATGCAATAAGTATCATTGAGACAGATTGTGAGGTGGATTTTGCACCCCCCCTGGATTACAAAGAACCGGAGAAGCTTGTTGCACCAACAAAAGGGAAGGAACAAGTTGCAGAAGCTCCAGATTCCGAAGCTGAACCCAAATTTAGTGCTTTCACAGGAACAGGAAGACGTTTGGATGGTAAATCTTCAAATCACCAGCCTCAGCCAATTTCATCTTCTAGGTCAGCTGATGCGAAGCAATCGGGTGGTAGTAGTAGATATGGCCATGCACAACAGTCTGCTGGATCTTCTAGCTCAGTGAATGGAATTCGTCAGTCTCAGGGAAAGTTAGTATTTGGACAAAATGCTAATCGGAATCCTAAAGAGACTCCAAAGGAGGCTTCAAAAGAGAGTAAAAAAGATGAGGCTGAAAAGGATAACCCAAAATTTCAACCATTTGCTGGGAAAAGGTACTCATTGAGAGGTTGA MYFDGYGYRGTSFEQSYQCFSTSFIDKPHLETGDRIIMPPSALDRLASLQIDYPMLFELRNDAVERVSHCGVLEFVAEEGMIYMPYWMMENMVLQEGDLVRVKNVTLPKGTYVKLQPHTKDFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVDFAPPLDYKEPEKLVAPTKGKEQVAEAPDSEAEPKFSAFTGTGRRLDGKSSNHQPQPISSSRSADAKQSGGSSRYGHAQQSAGSSSSVNGIRQSQGKLVFGQNANRNPKETPKEASKESKKDEAEKDNPKFQPFAGKRYSLRG* Homology
BLAST of CsGy7G000360 vs. ExPASy Swiss-Prot
Match: Q92890 (Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Homo sapiens OX=9606 GN=UFD1 PE=1 SV=3) HSP 1 Score: 243.4 bits (620), Expect = 3.5e-63 Identity = 124/239 (51.88%), Postives = 163/239 (68.20%), Query Frame = 0
BLAST of CsGy7G000360 vs. ExPASy Swiss-Prot
Match: P70362 (Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Mus musculus OX=10090 GN=Ufd1 PE=1 SV=2) HSP 1 Score: 242.7 bits (618), Expect = 5.9e-63 Identity = 124/239 (51.88%), Postives = 163/239 (68.20%), Query Frame = 0
BLAST of CsGy7G000360 vs. ExPASy Swiss-Prot
Match: Q9ES53 (Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Rattus norvegicus OX=10116 GN=Ufd1 PE=1 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 5.9e-63 Identity = 124/239 (51.88%), Postives = 163/239 (68.20%), Query Frame = 0
BLAST of CsGy7G000360 vs. ExPASy Swiss-Prot
Match: Q55BK0 (Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 9.4e-61 Identity = 136/339 (40.12%), Postives = 192/339 (56.64%), Query Frame = 0
BLAST of CsGy7G000360 vs. ExPASy Swiss-Prot
Match: Q9VTF9 (Ubiquitin fusion degradation protein 1 homolog OS=Drosophila melanogaster OX=7227 GN=Ufd1-like PE=2 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 2.6e-58 Identity = 114/241 (47.30%), Postives = 159/241 (65.98%), Query Frame = 0
BLAST of CsGy7G000360 vs. NCBI nr
Match: XP_004148541.1 (ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1 [Cucumis sativus] >KAE8645653.1 hypothetical protein Csa_020401 [Cucumis sativus]) HSP 1 Score: 636 bits (1640), Expect = 8.30e-230 Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0
BLAST of CsGy7G000360 vs. NCBI nr
Match: XP_011658558.1 (ubiquitin recognition factor in ER-associated degradation protein 1 isoform X2 [Cucumis sativus]) HSP 1 Score: 628 bits (1619), Expect = 1.22e-226 Identity = 320/322 (99.38%), Postives = 320/322 (99.38%), Query Frame = 0
BLAST of CsGy7G000360 vs. NCBI nr
Match: XP_008444838.1 (PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X1 [Cucumis melo]) HSP 1 Score: 606 bits (1562), Expect = 6.19e-218 Identity = 306/322 (95.03%), Postives = 314/322 (97.52%), Query Frame = 0
BLAST of CsGy7G000360 vs. NCBI nr
Match: XP_008448046.1 (PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X3 [Cucumis melo]) HSP 1 Score: 605 bits (1561), Expect = 8.80e-218 Identity = 307/322 (95.34%), Postives = 312/322 (96.89%), Query Frame = 0
BLAST of CsGy7G000360 vs. NCBI nr
Match: XP_016900499.1 (PREDICTED: ubiquitin fusion degradation protein 1 homolog isoform X1 [Cucumis melo]) HSP 1 Score: 598 bits (1543), Expect = 6.32e-215 Identity = 307/329 (93.31%), Postives = 312/329 (94.83%), Query Frame = 0
BLAST of CsGy7G000360 vs. ExPASy TrEMBL
Match: A0A0A0K0F7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G006300 PE=3 SV=1) HSP 1 Score: 636 bits (1640), Expect = 4.39e-228 Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0
BLAST of CsGy7G000360 vs. ExPASy TrEMBL
Match: A0A1S3BAT8 (ubiquitin fusion degradation protein 1 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488062 PE=3 SV=1) HSP 1 Score: 606 bits (1562), Expect = 3.00e-218 Identity = 306/322 (95.03%), Postives = 314/322 (97.52%), Query Frame = 0
BLAST of CsGy7G000360 vs. ExPASy TrEMBL
Match: A0A1S3BJQ5 (ubiquitin fusion degradation protein 1 homolog isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490342 PE=3 SV=1) HSP 1 Score: 605 bits (1561), Expect = 4.26e-218 Identity = 307/322 (95.34%), Postives = 312/322 (96.89%), Query Frame = 0
BLAST of CsGy7G000360 vs. ExPASy TrEMBL
Match: A0A1S4DWZ2 (ubiquitin fusion degradation protein 1 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490342 PE=3 SV=1) HSP 1 Score: 598 bits (1543), Expect = 3.06e-215 Identity = 307/329 (93.31%), Postives = 312/329 (94.83%), Query Frame = 0
BLAST of CsGy7G000360 vs. ExPASy TrEMBL
Match: A0A1S3BC70 (ubiquitin fusion degradation protein 1 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488062 PE=3 SV=1) HSP 1 Score: 598 bits (1541), Expect = 4.42e-215 Identity = 304/322 (94.41%), Postives = 312/322 (96.89%), Query Frame = 0
BLAST of CsGy7G000360 vs. TAIR 10
Match: AT2G21270.1 (ubiquitin fusion degradation 1 ) HSP 1 Score: 433.3 bits (1113), Expect = 1.7e-121 Identity = 230/327 (70.34%), Postives = 267/327 (81.65%), Query Frame = 0
BLAST of CsGy7G000360 vs. TAIR 10
Match: AT2G21270.2 (ubiquitin fusion degradation 1 ) HSP 1 Score: 433.3 bits (1113), Expect = 1.7e-121 Identity = 230/327 (70.34%), Postives = 267/327 (81.65%), Query Frame = 0
BLAST of CsGy7G000360 vs. TAIR 10
Match: AT2G21270.3 (ubiquitin fusion degradation 1 ) HSP 1 Score: 433.3 bits (1113), Expect = 1.7e-121 Identity = 230/327 (70.34%), Postives = 267/327 (81.65%), Query Frame = 0
BLAST of CsGy7G000360 vs. TAIR 10
Match: AT4G38930.2 (Ubiquitin fusion degradation UFD1 family protein ) HSP 1 Score: 420.2 bits (1079), Expect = 1.5e-117 Identity = 215/325 (66.15%), Postives = 259/325 (79.69%), Query Frame = 0
BLAST of CsGy7G000360 vs. TAIR 10
Match: AT4G38930.1 (Ubiquitin fusion degradation UFD1 family protein ) HSP 1 Score: 417.5 bits (1072), Expect = 9.5e-117 Identity = 214/323 (66.25%), Postives = 257/323 (79.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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