CsGy7G000010 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy7G000010
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionProtein RADIALIS-like 1
LocationGy14Chr7: 13287 .. 14392 (+)
RNA-Seq ExpressionCsGy7G000010
SyntenyCsGy7G000010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATCCTTTTTCCTTAGAACAGAAATATTGAATTCTTTTTATTCTAACCCATTTTTTTTCTCTAGTTTTGCTCTCTCCATTATTTGAAACCCAATTAAAGTTAGAAATATACATTCAAGAAATTAAACTATGGCCTCATTGTCAGCTCATGGGTCAGGTGTATGGACTGCAAAGCAAAACAAGGCATTTGAAGAAGCTTTGGCAATGTATGATAAAGACACACCTGATAGATGGTTGAATGTTGCAAAAGCCATTGGTGGGAAAACTGAAGAGGAAGTCAAAAGGCATTACCAACTTCTTCTGGAGGATGTTAAGCATATTGAGTCGGGCAAAGTTCCTTTTCCTTACAGAAGCTCAAGAAGCAATTAATTGCTACTAACATATGATCAAAAGATGGAGGTAATTTAGTTTCATTTCGTGTCTACTTGATAATATTTTTTTACCTAAACTTTGATAAAACGTTTTTTAAATTTTACGTATACAAATTTAAGAAACAACAAATTCAATAATAATTGTCATGAAATGCCATTTTTCCGTTTGTTGTTTCCAATGTTAAACTTTAAAATATTATTTTCATGAAAACTTTTTACTCATTTTGTTATTTAAAGATTAGAAACTCGGTTATGCTTCTCGAGAAAACAAGAAACAATATATGAGAAATAAGAAACAATTTAAATGAGAGTTGAAATGTAATTTTAGAAAATGCAAAAGATATACAATACATATTTTTTGAAATTAAAACAATAAAATTCGAGACTTATTCTATGACAAAGTCTTTTTAACCATTTGACTCTTTATCTTATTCTGAAGCCACAAATATTATATCCTTTATTCACACTTCACAGCCCATAGTTTCATTATCAATGAACAGTGACCTCTTCGTTTCTCATAGATTTAAAGCCAGATTCAGAGACAAAGAGAAAGACAATAAAATCTTTTCTAATAATTGAGAGACGACAAAATTGTCTTGTATTAAAGTATTGATATAATTAAATATATCTGTTTTCCTTTGACCTTTTTTCAGGATGAGAAAGATGAAGTTGAATGAAGCCAGGTGCAGTACTGGAAGAATAAAAAGGAAAGAGCCATTTTCTTGCTGTTGCACCA

mRNA sequence

GATCCTTTTTCCTTAGAACAGAAATATTGAATTCTTTTTATTCTAACCCATTTTTTTTCTCTAGTTTTGCTCTCTCCATTATTTGAAACCCAATTAAAGTTAGAAATATACATTCAAGAAATTAAACTATGGCCTCATTGTCAGCTCATGGGTCAGGTGTATGGACTGCAAAGCAAAACAAGGCATTTGAAGAAGCTTTGGCAATGTATGATAAAGACACACCTGATAGATGGTTGAATGTTGCAAAAGCCATTGGTGGGAAAACTGAAGAGGAAGTCAAAAGGCATTACCAACTTCTTCTGGAGGATGTTAAGCATATTGAGTCGGGCAAAGTTCCTTTTCCTTACAGAAGCTCAAGAAGCAATTAATTGCTACTAACATATGATCAAAAGATGGAGGATGAGAAAGATGAAGTTGAATGAAGCCAGGTGCAGTACTGGAAGAATAAAAAGGAAAGAGCCATTTTCTTGCTGTTGCACCA

Coding sequence (CDS)

ATGGCCTCATTGTCAGCTCATGGGTCAGGTGTATGGACTGCAAAGCAAAACAAGGCATTTGAAGAAGCTTTGGCAATGTATGATAAAGACACACCTGATAGATGGTTGAATGTTGCAAAAGCCATTGGTGGGAAAACTGAAGAGGAAGTCAAAAGGCATTACCAACTTCTTCTGGAGGATGTTAAGCATATTGAGTCGGGCAAAGTTCCTTTTCCTTACAGAAGCTCAAGAAGCAATTAA

Protein sequence

MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKHIESGKVPFPYRSSRSN*
Homology
[Close]
BLAST of CsGy7G000010 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 7.8e-25
Identity = 52/76 (68.42%), Postives = 65/76 (85.53%), Query Frame = 0 

Query: 2  ASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDV 61
          +S+S+  SG WTAKQNKAFE+ALA YD+DTP+RW NVAK +GGKT EEVKRHY+LL++D+
Sbjct: 4  SSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 62 KHIESGKVPFP-YRSS 77
            IE+G VPFP YR+S
Sbjct: 64 NSIENGHVPFPNYRTS 79

[Close]
BLAST of CsGy7G000010 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.3e-24
Identity = 52/77 (67.53%), Postives = 66/77 (85.71%), Query Frame = 0 

Query: 5  SAHGSG-VWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVKH 64
          S  GSG  W+AK+NKAFE ALA+YDKDTPDRW NVA+A+ G+T EEVK+HY++L+ED+K+
Sbjct: 3  STRGSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKY 62

Query: 65 IESGKVPFP-YRSSRSN 80
          IESGKVPFP YR++  N
Sbjct: 63 IESGKVPFPNYRTTGGN 79

[Close]
BLAST of CsGy7G000010 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 5.1e-24
Identity = 50/78 (64.10%), Postives = 64/78 (82.05%), Query Frame = 0 

Query: 3  SLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVK 62
          S+S++GSG WT KQNKAFE ALA+YD+DTPDRW NVA+A+GGKT EE KR Y LL+ D++
Sbjct: 5  SMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIE 64

Query: 63 HIESGKVPFP-YRSSRSN 80
           IE+G VPFP Y+++  N
Sbjct: 65 SIENGHVPFPDYKTTTGN 82

[Close]
BLAST of CsGy7G000010 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.8e-22
Identity = 51/80 (63.75%), Postives = 61/80 (76.25%), Query Frame = 0 

Query: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60
          MAS S      WT  QNK FE ALA+YDKDTPDRW NVAKA+GGKT EEVKRHY +L+ED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VKHIESGKVPFP-YRSSRSN 80
          + +IE+G+VP P Y++  SN
Sbjct: 61 LINIETGRVPLPNYKTFESN 80

[Close]
BLAST of CsGy7G000010 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 3.6e-22
Identity = 50/80 (62.50%), Postives = 61/80 (76.25%), Query Frame = 0 

Query: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60
          MAS S   S  WT K+NK FE ALA YD+DTPDRW NVA+A+GGK+ EEV+RHY+LL+ D
Sbjct: 1  MASNSMSSSASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRD 60

Query: 61 VKHIESGKVPFP-YRSSRSN 80
          V  IESG+ P P YRS+ +N
Sbjct: 61 VNDIESGRYPHPNYRSNGNN 80

[Close]
BLAST of CsGy7G000010 vs. NCBI nr
Match: XP_004151116.1 (protein RADIALIS-like 1 [Cucumis sativus] >KGN44075.1 hypothetical protein Csa_020265 [Cucumis sativus])

HSP 1 Score: 164 bits (416), Expect = 3.59e-51
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60
          MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED
Sbjct: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VKHIESGKVPFPYRSSRSN 79
          VKHIESGKVPFPYRSSRSN
Sbjct: 61 VKHIESGKVPFPYRSSRSN 79

[Close]
BLAST of CsGy7G000010 vs. NCBI nr
Match: KAA0036170.1 (protein RADIALIS-like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 161 bits (407), Expect = 8.50e-50
Identity = 76/79 (96.20%), Postives = 78/79 (98.73%), Query Frame = 0 

Query: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60
          MAS+SAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VKHIESGKVPFPYRSSRSN 79
          VKHIESGKVPFPYR+SR N
Sbjct: 61 VKHIESGKVPFPYRTSRGN 79

[Close]
BLAST of CsGy7G000010 vs. NCBI nr
Match: XP_008447025.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis melo])

HSP 1 Score: 159 bits (403), Expect = 3.47e-49
Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 0 

Query: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60
          MAS+SAHGSGVWTAKQNKAFE+ALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VKHIESGKVPFPYRSSRSN 79
          VKHIESGKVPFPYR+SR N
Sbjct: 61 VKHIESGKVPFPYRTSRGN 79

[Close]
BLAST of CsGy7G000010 vs. NCBI nr
Match: XP_022952073.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_022972518.1 protein RADIALIS-like 1 [Cucurbita maxima] >XP_023554705.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo] >KAG6572043.1 Transcription factor RADIALIS, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 154 bits (389), Expect = 4.75e-47
Identity = 72/79 (91.14%), Postives = 77/79 (97.47%), Query Frame = 0 

Query: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60
          MAS+SAHGSGVWTAKQNKAFEEALAMYD+D PDRWLNVAKAIGGKTEEEVKRHYQ+L+ED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDRPDRWLNVAKAIGGKTEEEVKRHYQVLVED 60

Query: 61 VKHIESGKVPFPYRSSRSN 79
          VKHIESGKVPFPYRSSR +
Sbjct: 61 VKHIESGKVPFPYRSSRGS 79

[Close]
BLAST of CsGy7G000010 vs. NCBI nr
Match: XP_022933530.1 (protein RADIALIS-like 1 [Cucurbita moschata] >KAG7022283.1 Transcription factor RADIALIS, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 139 bits (350), Expect = 4.37e-41
Identity = 63/76 (82.89%), Postives = 72/76 (94.74%), Query Frame = 0 

Query: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60
          MAS+S+HGS  WTAKQNKAFEEALA YD+DTPDRWLNVA+A+GGKTEEEVKRHYQLL+ED
Sbjct: 1  MASMSSHGSASWTAKQNKAFEEALARYDRDTPDRWLNVARAVGGKTEEEVKRHYQLLVED 60

Query: 61 VKHIESGKVPFPYRSS 76
          VK IESG+VP+PYR+S
Sbjct: 61 VKFIESGRVPYPYRNS 76

[Close]
BLAST of CsGy7G000010 vs. ExPASy TrEMBL
Match: A0A0A0K344 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G169070 PE=4 SV=1)

HSP 1 Score: 164 bits (416), Expect = 1.74e-51
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60
          MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED
Sbjct: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VKHIESGKVPFPYRSSRSN 79
          VKHIESGKVPFPYRSSRSN
Sbjct: 61 VKHIESGKVPFPYRSSRSN 79

[Close]
BLAST of CsGy7G000010 vs. ExPASy TrEMBL
Match: A0A5A7SYM4 (Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold69G00290 PE=4 SV=1)

HSP 1 Score: 161 bits (407), Expect = 4.11e-50
Identity = 76/79 (96.20%), Postives = 78/79 (98.73%), Query Frame = 0 

Query: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60
          MAS+SAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VKHIESGKVPFPYRSSRSN 79
          VKHIESGKVPFPYR+SR N
Sbjct: 61 VKHIESGKVPFPYRTSRGN 79

[Close]
BLAST of CsGy7G000010 vs. ExPASy TrEMBL
Match: A0A1S3BGF6 (protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1)

HSP 1 Score: 159 bits (403), Expect = 1.68e-49
Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 0 

Query: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60
          MAS+SAHGSGVWTAKQNKAFE+ALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VKHIESGKVPFPYRSSRSN 79
          VKHIESGKVPFPYR+SR N
Sbjct: 61 VKHIESGKVPFPYRTSRGN 79

[Close]
BLAST of CsGy7G000010 vs. ExPASy TrEMBL
Match: A0A6J1IA78 (protein RADIALIS-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111471063 PE=4 SV=1)

HSP 1 Score: 154 bits (389), Expect = 2.30e-47
Identity = 72/79 (91.14%), Postives = 77/79 (97.47%), Query Frame = 0 

Query: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60
          MAS+SAHGSGVWTAKQNKAFEEALAMYD+D PDRWLNVAKAIGGKTEEEVKRHYQ+L+ED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDRPDRWLNVAKAIGGKTEEEVKRHYQVLVED 60

Query: 61 VKHIESGKVPFPYRSSRSN 79
          VKHIESGKVPFPYRSSR +
Sbjct: 61 VKHIESGKVPFPYRSSRGS 79

[Close]
BLAST of CsGy7G000010 vs. ExPASy TrEMBL
Match: A0A6J1GJG0 (protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454835 PE=4 SV=1)

HSP 1 Score: 154 bits (389), Expect = 2.30e-47
Identity = 72/79 (91.14%), Postives = 77/79 (97.47%), Query Frame = 0 

Query: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60
          MAS+SAHGSGVWTAKQNKAFEEALAMYD+D PDRWLNVAKAIGGKTEEEVKRHYQ+L+ED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDRPDRWLNVAKAIGGKTEEEVKRHYQVLVED 60

Query: 61 VKHIESGKVPFPYRSSRSN 79
          VKHIESGKVPFPYRSSR +
Sbjct: 61 VKHIESGKVPFPYRSSRGS 79

[Close]
BLAST of CsGy7G000010 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 114.0 bits (284), Expect = 5.6e-26
Identity = 52/76 (68.42%), Postives = 65/76 (85.53%), Query Frame = 0 

Query: 2  ASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDV 61
          +S+S+  SG WTAKQNKAFE+ALA YD+DTP+RW NVAK +GGKT EEVKRHY+LL++D+
Sbjct: 4  SSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 62 KHIESGKVPFP-YRSS 77
            IE+G VPFP YR+S
Sbjct: 64 NSIENGHVPFPNYRTS 79

[Close]
BLAST of CsGy7G000010 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 111.3 bits (277), Expect = 3.6e-25
Identity = 50/78 (64.10%), Postives = 64/78 (82.05%), Query Frame = 0 

Query: 3  SLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLEDVK 62
          S+S++GSG WT KQNKAFE ALA+YD+DTPDRW NVA+A+GGKT EE KR Y LL+ D++
Sbjct: 5  SMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIE 64

Query: 63 HIESGKVPFP-YRSSRSN 80
           IE+G VPFP Y+++  N
Sbjct: 65 SIENGHVPFPDYKTTTGN 82

[Close]
BLAST of CsGy7G000010 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 105.5 bits (262), Expect = 2.0e-23
Identity = 51/80 (63.75%), Postives = 61/80 (76.25%), Query Frame = 0 

Query: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60
          MAS S      WT  QNK FE ALA+YDKDTPDRW NVAKA+GGKT EEVKRHY +L+ED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VKHIESGKVPFP-YRSSRSN 80
          + +IE+G+VP P Y++  SN
Sbjct: 61 LINIETGRVPLPNYKTFESN 80

[Close]
BLAST of CsGy7G000010 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 105.5 bits (262), Expect = 2.0e-23
Identity = 51/80 (63.75%), Postives = 61/80 (76.25%), Query Frame = 0 

Query: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60
          MAS S      WT  QNK FE ALA+YDKDTPDRW NVAKA+GGKT EEVKRHY +L+ED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VKHIESGKVPFP-YRSSRSN 80
          + +IE+G+VP P Y++  SN
Sbjct: 61 LINIETGRVPLPNYKTFESN 80

[Close]
BLAST of CsGy7G000010 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 101.7 bits (252), Expect = 2.9e-22
Identity = 47/72 (65.28%), Postives = 55/72 (76.39%), Query Frame = 0 

Query: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60
          MAS S   S  WT+KQNK FE ALA+YDKDTPDRW NVAKA+G K+ EEVKRHY +L+ED
Sbjct: 1  MASSSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVED 60

Query: 61 VKHIESGKVPFP 73
          + +IE   VP P
Sbjct: 61 LMNIEQDLVPLP 72

The following BLAST results are available for this feature:
BLAST of CsGy7G000010 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4JVB87.8e-2568.42Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1[more]
Q58FS32.3e-2467.53Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1[more]
Q9SIJ55.1e-2464.10Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1[more]
Q1A1732.8e-2263.75Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1[more]
Q6NNN03.6e-2262.50Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1[more]
BLAST of CsGy7G000010 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004151116.13.59e-51100.00protein RADIALIS-like 1 [Cucumis sativus] >KGN44075.1 hypothetical protein Csa_0... [more]
KAA0036170.18.50e-5096.20protein RADIALIS-like 1 [Cucumis melo var. makuwa][more]
XP_008447025.13.47e-4994.94PREDICTED: protein RADIALIS-like 1 [Cucumis melo][more]
XP_022952073.14.75e-4791.14protein RADIALIS-like 1 [Cucurbita moschata] >XP_022972518.1 protein RADIALIS-li... [more]
XP_022933530.14.37e-4182.89protein RADIALIS-like 1 [Cucurbita moschata] >KAG7022283.1 Transcription factor ... [more]
BLAST of CsGy7G000010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3441.74e-51100.00SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G169070 PE=4 S... [more]
A0A5A7SYM44.11e-5096.20Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S3BGF61.68e-4994.94protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1[more]
A0A6J1IA782.30e-4791.14protein RADIALIS-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111471063 PE=4 SV=1[more]
A0A6J1GJG02.30e-4791.14protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454835 PE=4 SV=1[more]
BLAST of CsGy7G000010 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G39250.15.6e-2668.42RAD-like 1 [more]
AT2G21650.13.6e-2564.10Homeodomain-like superfamily protein [more]
AT1G75250.12.0e-2363.75RAD-like 6 [more]
AT1G75250.22.0e-2363.75RAD-like 6 [more]
AT1G19510.12.9e-2265.28RAD-like 5 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 8..60
e-value: 1.6E-8
score: 44.3
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 10..58
score: 6.434677
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 12..58
e-value: 3.89122E-7
score: 40.6366
NoneNo IPR availableGENE3D1.10.10.60coord: 4..71
e-value: 7.9E-24
score: 85.2
NoneNo IPR availablePANTHERPTHR43952:SF74PROTEIN RADIALIS-LIKE 2coord: 7..74
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 10..58
e-value: 6.0E-7
score: 29.6
IPR044636Transcription factor RADIALIS-likePANTHERPTHR43952MYB FAMILY TRANSCRIPTION FACTOR-RELATEDcoord: 7..74
IPR017884SANT domainPROSITEPS51293SANTcoord: 7..62
score: 10.615332
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 10..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy7G000010.2CsGy7G000010.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003700 DNA-binding transcription factor activity