CsGy6G036230 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G036230
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr6: 31842170 .. 31843143 (+)
RNA-Seq ExpressionCsGy6G036230
SyntenyCsGy6G036230
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCATATCCATTCCATTCCACTTTTCTCAAAGTTACAAACCGCCCCCTTCTCCCTCCCCCTAACGAAAAAGATATTAAAAAAAGGAGGAGGAGGGTGGAAGAAGAGAGTTCTGCAAATTTCAATCATCCACATCAACGGGGTATTGAAGATTCAGATTTTTCCTGCCCAATCCCCTTTTTTTCTTTTTCCATTTCTCATCATCGGTTTTCTTCAATCATCGATCTCACTGGGTATTTATCATTTTCTACTTTAATCATTTCTTATTGACTTTATTCTTCAATCATTGGGAATAATCTCTCATAATTTTCGTTTCCATTTCCCGTTTTCTTTCTGGGTTTTTTTTTTTTTTTTCGAATTTTGTTGATCGTATAGATGTTGATTGAGCGTATTTTCTGATTATGGATTCCTTATATATAGGGGCCTTCTTCCTGTTAGCGATTCATTGTTATTGTAAACTTTTGAGCTGATTTGGATGTATCGACCACATTTAATGTTTTGAATGTTGAGAGGATATAATTTTCTGGGGCTTTTCCCATCTTGTGAATTCTGTTTCCATTTCGCCCGATGGAAGAGTCCCAAAGTTTTGCTTCTATTAGAGCTGGAGGAAACAGGAAAAAAAAAAAAAAGATAAATAAATCTCAGGTTAATTTTGGTTGCTAATTTTTCTCGTTTTTGGAATTATTGCATCTGAGGTTTTGGTAAAGAAAAAACTCTTCCAATTTCATTTTTCTTGGACTCAGTCGTTTTTGGCATGTAATCCTCGAGATGAAGAATTTGGGTGTCCTTTTGCTGCTGATGCCATTATTTAACTTTATTCTACTATTGTTATTTGTTCATTATAAGCGTTAGTGTGAATTTATATCTATGCTGATTCAGAGTATAAAGGGGTCTTTTTAGAATTGTGTGTGTTTGTTTGTTGGGTTGAGTTATTCAAGCTGCTTTTGTCGAAACATAGGATTTGTTGGATGA

mRNA sequence

ATGATTCATATCCATTCCATTCCACTTTTCTCAAAGTTACAAACCGCCCCCTTCTCCCTCCCCCTAACGAAAAAGATATTAAAAAAAGGAGGAGGAGGGTGGAAGAAGAGAGTTCTGCAAATTTCAATCATCCACATCAACGGGGTATTGAAGATTCAGATTTTTCCTGCCCAATCCCCTTTTTTTCTTTTTCCATTTCTCATCATCGGTTTTCTTCAATCATCGATCTCACTGGGATTTGTTGGATGA

Coding sequence (CDS)

ATGATTCATATCCATTCCATTCCACTTTTCTCAAAGTTACAAACCGCCCCCTTCTCCCTCCCCCTAACGAAAAAGATATTAAAAAAAGGAGGAGGAGGGTGGAAGAAGAGAGTTCTGCAAATTTCAATCATCCACATCAACGGGGTATTGAAGATTCAGATTTTTCCTGCCCAATCCCCTTTTTTTCTTTTTCCATTTCTCATCATCGGTTTTCTTCAATCATCGATCTCACTGGGATTTGTTGGATGA

Protein sequence

MIHIHSIPLFSKLQTAPFSLPLTKKILKKGGGGWKKRVLQISIIHINGVLKIQIFPAQSPFFLFPFLIIGFLQSSISLGFVG*
Homology
[Close]
BLAST of CsGy6G036230 vs. NCBI nr
Match: KGN49460.1 (hypothetical protein Csa_003448 [Cucumis sativus])

HSP 1 Score: 165 bits (417), Expect = 3.13e-51
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  MIHIHSIPLFSKLQTAPFSLPLTKKILKKGGGGWKKRVLQISIIHINGVLKIQIFPAQSP 60
          MIHIHSIPLFSKLQTAPFSLPLTKKILKKGGGGWKKRVLQISIIHINGVLKIQIFPAQSP
Sbjct: 1  MIHIHSIPLFSKLQTAPFSLPLTKKILKKGGGGWKKRVLQISIIHINGVLKIQIFPAQSP 60

Query: 61 FFLFPFLIIGFLQSSISLGFVG 82
          FFLFPFLIIGFLQSSISLGFVG
Sbjct: 61 FFLFPFLIIGFLQSSISLGFVG 82

[Close]
BLAST of CsGy6G036230 vs. ExPASy TrEMBL
Match: A0A0A0KIA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525460 PE=4 SV=1)

HSP 1 Score: 165 bits (417), Expect = 1.52e-51
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  MIHIHSIPLFSKLQTAPFSLPLTKKILKKGGGGWKKRVLQISIIHINGVLKIQIFPAQSP 60
          MIHIHSIPLFSKLQTAPFSLPLTKKILKKGGGGWKKRVLQISIIHINGVLKIQIFPAQSP
Sbjct: 1  MIHIHSIPLFSKLQTAPFSLPLTKKILKKGGGGWKKRVLQISIIHINGVLKIQIFPAQSP 60

Query: 61 FFLFPFLIIGFLQSSISLGFVG 82
          FFLFPFLIIGFLQSSISLGFVG
Sbjct: 61 FFLFPFLIIGFLQSSISLGFVG 82

The following BLAST results are available for this feature:
BLAST of CsGy6G036230 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G036230 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49460.13.13e-51100.00hypothetical protein Csa_003448 [Cucumis sativus][more]
BLAST of CsGy6G036230 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIA11.52e-51100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525460 PE=4 SV=1[more]
BLAST of CsGy6G036230 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G036230.2CsGy6G036230.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane