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CsGy6G036030 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCCGGAAGCGGGAAGCCCCAGCGAGGAATTGGCTTGAACTGCCTGCAGAAGTACTCCTTGTGATTCTGCAGAAGTTAGGGGCTGTTGAAATACTAACCACCGCTCAAAATGTCTGTTCTTTGTTGTATAAGATCTGCAAGGATCCTTTCTTGTGGCGTGTCATCAATTTCGACTATTGGAATCGTGTGCACAATTTCGAAGATTGGAATCGTTTGTTTTATTGGAAAAATGTGTGCAAGCGGGCTGTTGATCGTGGTTGTGATCGGTCGACATGAATATTGAGCATTTTGGCTCTGATGAGTTGCTCCGATACATCGCTATCAGGTAACCATTGCCTGTGCGTCATGAACTTGTGGTTTTAAGTTAGTTTTGAAATCACAGATAGTCTATTTTATACATGTTTCTTAGTTATATTTTATAAATTTTATCTAATTTTCTGTCTTTGTTGATCATGAGTTACGTACACATTTACTTATCCAGTTCAAATCAAGTTAGAAAACGTCGGGTTACAGTAAACAAATGATGGATTGAGAGCAGCAGTTTGGGATCTTCCATTGTTGGAGCATCTTGAAAATTGAATCATTACAAATTGGACTTGAACCCAAAACTTTGAGAACTATTGGACGATGTTGCCATTTACTGAAATCGCTTAAACTAAGAGAGGCAGCTATTGCGACCTTTGAAGTGCCGCTTGCTATTGCTAAACATATGCCCAAGTTACATCATCTTGAAATTGTGGGCATTTGCATAACCAACCTTGGTTTGCATGCCCTTCTTGTTAGATGTTCTGATTTACAATCTCTTGACTTAAGCGAGAGTTGGCTTATGGATTTTGACGAACACTTGAAAGAAAATGTGAAAGGCTCAAAACTTTTGCGTCAAATCGGTTGAAGTAATTACGCTCCAATGTGTTCCCACCAGTTTCCTCTAGAATTTACCATTCCCATGATTTCTCTGGTCTCGCGATTATTATCTCGACGATGTTCTTGATATGATATATTTTTATTTGGGGCATTTTTTATGGTTGGTACGGTGAAGTTATTTTGTTAGAAAGGTGGAAATTGGTATGCATGCTTTTTTGTTAGCTTTGAGTGCTATGTGGTCGAGAATTATTGATATATATTACGTACTGTCATGTTGTTGTTGATATTGATGTGCACATGAGGGGATCAGCAAAAACTGTATTTTGGTATTTTCATAAATTATAAACTCGGTTACCAAAGTTCTTTTATTCAATTATGTTCAATTACAATTTTATGCAATAAGTACGCCGTGTAAATATTGCTTTTTTAGAAGTGAAAAGGTTAAAATAACTGTGTTTTAAAAAATAAACATGAACAAATGTAGTAATTGATTTTTAGAAAATATATCACACTATTTATTGAAATTGCATAACAGAAATGCTAATGCTACCATAGCATTTTGATAATGCTACCATATCATTTTGATAATGCTACCATAGCATTTTGCAAATGGATAGAAAAACAAAGGAGTTTAATGGGGTTTTTTTTACGCATGGTCCTTTCCTTTTCAAGTGTTCAATCCAAATTTAACTCTCTTTTCAATAGTTAGATAAACTTTATAATTTGATTTTACAATTGGACAACTCAGTAATTTATTTCCATTTGATGACCAAACCCTAATTGATTGTCGTCTCCATTTCAAAATTTCACTCAAAACTCTCCCCAAAATTCACCATTGTCTATGATTCTGTTGAAGTTCGACATACGCGTTTGCATGGTAACTTAAGATTTGCAAAGAACCTCACATGTGGCGTCTTCCTCATCTTCAAAACTAAACCACCTCAAACCCTAAACCCTTTATTGAAATGGGTGAAACTGTCAGTTTATTGTAGATCAGGATTTATTTCGAGTTCTGATGAAGCGGCCCTTGCTATTGCTGAAACTATGACCAAGTTAGCTGACCTTGCAATTGTGGGCAATCGCCTAACTAGCTTTGGTTTGCATGCTCTTCTTGATAGTTGTTCTAACTTAAAAATCTCTTGACTTGCGCATGTGTTGTCATTTAGATTTTGAGGAAAACTTGAAAAAAAAAAGTGTCAAAAGGATCAAAACTTTGCGTCTGCCTGATCATTGGACTATGGGGATGGATTACGTGGGGAATTAACTACCGATGCGTATCATGACATGATCTTATGATTTATTTTGATTTGGGGCATTTTTTATGGTTGATACTTGATAAGATCATGAAGTTGTTTAGTTAGAAAAGGCGGAAATTGGGACATTTTTGTTAGCTTTGAGTGCTATGTGATCGAGAATTATCGATATATATATTATGTATTATCATGTTCGTTATTGATACTGATGTGTGCACATCAGGATCAGCAAAAATCTCTAAGTATGGTTGTGAAAGTTATTTTATCCAATTATTATATTTAATTACAGTTTTAGGCTGAAAAAAGTTAAAATAATTGTTTTTTAAAGAAATAAACACAGAACAAATGTATAGTAACTGATTTATAGAAAATTGATCACACTATTTATTGAAATTGCATGACAAAAATGCTAATGCTACCATAGGATTTGCTAATGCTCCCTTTTCCAACCAGACAATTACCCACATAGGAAAATAAATTGAAAATTATAAAAAATATATTGAAGAAATAGAAAATGGGATGATAGGTGATAACGATGAGGCCTCTGCTATCCCATTCACGATCGTCCTGATACTGAAGAAGATCCCTTTTTGGCTTCTTGACCACTGGTGAATTCAACTATCGTTTCTTACTGAGGGATGATTTCTTTGACTATGATGACTACTCAGACTACCGTAGACATGGTTACTCGAGGGACGACGGTTTCTTTGACTAAGAGCAATTAATCAACGTCCTCTTTCCATTCCAATTAAATCTAACCACTGTTTTGTTTTATGGGTATCTTATATTCCAAGTAACGGATGTAACTAAGCAAACTTTGGACTGCATTTATGTTTTTGTGTGTAGAAGTAATTGTATAGGGCTGTATTGAAATTTTTTTGTAATTAAACTGATGGATTGTATGTCATAACAAAAAAGATGATTGAGTTTTTATGTTCCATTTACTTGGTAAAAAAAAGTCATTTATGGATGATTTGGTTCAAGGTTTAAAGGAAATGAAAGATAACCCTATTTGGTTATTGTGCATGAAGATGCAGTTAAGATTTTAGGAACAAATATTTTTTATTTATTTTATTTATGAAATTAAATTTAATAATCTTGAATAACGCTCAGAAATAAATTAATTAAAGAATAAATATCATTTATTATGTTGATAAAAATATTTAAGAATCTATTACACCTCTAATGGTAAATATTTGGATCAATAAGTATCTCACTTGAAATAAACAAAACATATTAAACCCGCATGGTTCAGGTTTATATCTTTATTTAATTTGATTCTCAATATAGAAAAATAAAATCCAAAGTTTCTTTACAAAGATTGAAAGAAAAAGTAATTCAAATTTTTATTTAGTAAAAAAGAGAAACAAATCATCGTATGA ATGATCCGGAAGCGGGAAGCCCCAGCGAGGAATTGGCTTGAACTGCCTGCAGAAGTACTCCTTGTGATTCTGCAGAAGTTAGGGGCTGTTGAAATACTAACCACCGCTCAAAATGTCTGTTCTTTGTTGTATAAGATCTGCAAGGATCCTTTCTTGTGGCGTGTCATCAATTTCGACTATTGGAATCGTGTGCACAATTTCGAAGATTGGAATCGTTTGTTTTATTGGAAAAATCAGTTTGGGATCTTCCATTGTTGGAGCATCTTGAAAATTGAATCATTACAAATTGGACTTGAACCCAAAACTTTGAGAACTATTGGACGATGTTGCCATTTACTGAAATCGCTTAAACTAAGAGAGGCAGCTATTGCGACCTTTGAAGTGCCGCTTGCTATTGCTAAACATATGCCCAAGTTACATCATCTTGAAATTGTGGGCATTTGCATAACCAACCTTGGTTTGCATGCCCTTCTTGTTAGATGTTCTGATTTACAATCTCTTGACTTAAGCGAGAGTTGGCTTATGGATTTTGACGAACACTTGAAAGAAAATGTGAAAGGCTCAAAACTTTTGCGTCAAATCGTTCGACATACGCGTTTGCATGGTAACTTAAGATTTGCAAAGAACCTCACATGTGGCGTCTTCCTCATCTTCAAAACTAAACCACCTCAAACCCTAAACCCTTTATTGAAATGGGTGAAACTGTCAGTTTATTGTAGATCAGGATTTATTTCGAGTTCTGATGAAGCGGCCCTTGCTATTGCTGAAACTATGACCAAGTTAGCTGACCTTGCAATTGTGGGCAATCGCCTAACTAGCTTTGGTTTGCATGCTCTTCTTGATAAAATAGAAAATGGGATGATAGGTGATAACGATGAGGCCTCTGCTATCCCATTCACGATCGTCCTGATACTGAAGAAGATCCCTTTTTGGCTTCTTGACCACTGTAAAAAAGAGAAACAAATCATCGTATGA ATGATCCGGAAGCGGGAAGCCCCAGCGAGGAATTGGCTTGAACTGCCTGCAGAAGTACTCCTTGTGATTCTGCAGAAGTTAGGGGCTGTTGAAATACTAACCACCGCTCAAAATGTCTGTTCTTTGTTGTATAAGATCTGCAAGGATCCTTTCTTGTGGCGTGTCATCAATTTCGACTATTGGAATCGTGTGCACAATTTCGAAGATTGGAATCGTTTGTTTTATTGGAAAAATCAGTTTGGGATCTTCCATTGTTGGAGCATCTTGAAAATTGAATCATTACAAATTGGACTTGAACCCAAAACTTTGAGAACTATTGGACGATGTTGCCATTTACTGAAATCGCTTAAACTAAGAGAGGCAGCTATTGCGACCTTTGAAGTGCCGCTTGCTATTGCTAAACATATGCCCAAGTTACATCATCTTGAAATTGTGGGCATTTGCATAACCAACCTTGGTTTGCATGCCCTTCTTGTTAGATGTTCTGATTTACAATCTCTTGACTTAAGCGAGAGTTGGCTTATGGATTTTGACGAACACTTGAAAGAAAATGTGAAAGGCTCAAAACTTTTGCGTCAAATCGTTCGACATACGCGTTTGCATGGTAACTTAAGATTTGCAAAGAACCTCACATGTGGCGTCTTCCTCATCTTCAAAACTAAACCACCTCAAACCCTAAACCCTTTATTGAAATGGGTGAAACTGTCAGTTTATTGTAGATCAGGATTTATTTCGAGTTCTGATGAAGCGGCCCTTGCTATTGCTGAAACTATGACCAAGTTAGCTGACCTTGCAATTGTGGGCAATCGCCTAACTAGCTTTGGTTTGCATGCTCTTCTTGATAAAATAGAAAATGGGATGATAGGTGATAACGATGAGGCCTCTGCTATCCCATTCACGATCGTCCTGATACTGAAGAAGATCCCTTTTTGGCTTCTTGACCACTGTAAAAAAGAGAAACAAATCATCGTATGA MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINFDYWNRVHNFEDWNRLFYWKNQFGIFHCWSILKIESLQIGLEPKTLRTIGRCCHLLKSLKLREAAIATFEVPLAIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDEHLKENVKGSKLLRQIVRHTRLHGNLRFAKNLTCGVFLIFKTKPPQTLNPLLKWVKLSVYCRSGFISSSDEAALAIAETMTKLADLAIVGNRLTSFGLHALLDKIENGMIGDNDEASAIPFTIVLILKKIPFWLLDHCKKEKQIIV* Homology
BLAST of CsGy6G036030 vs. ExPASy Swiss-Prot
Match: Q9S9V9 (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.3e-17 Identity = 73/233 (31.33%), Postives = 109/233 (46.78%), Query Frame = 0
BLAST of CsGy6G036030 vs. ExPASy Swiss-Prot
Match: Q9M0U9 (F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.1e-16 Identity = 73/239 (30.54%), Postives = 111/239 (46.44%), Query Frame = 0
BLAST of CsGy6G036030 vs. ExPASy Swiss-Prot
Match: Q9M0U8 (Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana OX=3702 GN=FBL21 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.6e-12 Identity = 67/237 (28.27%), Postives = 106/237 (44.73%), Query Frame = 0
BLAST of CsGy6G036030 vs. ExPASy Swiss-Prot
Match: Q9M0U6 (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 3.6e-12 Identity = 67/240 (27.92%), Postives = 103/240 (42.92%), Query Frame = 0
BLAST of CsGy6G036030 vs. ExPASy Swiss-Prot
Match: Q9S9V8 (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 6.9e-11 Identity = 60/219 (27.40%), Postives = 92/219 (42.01%), Query Frame = 0
BLAST of CsGy6G036030 vs. NCBI nr
Match: KAE8647757.1 (hypothetical protein Csa_003460 [Cucumis sativus]) HSP 1 Score: 654 bits (1686), Expect = 9.42e-237 Identity = 322/324 (99.38%), Postives = 322/324 (99.38%), Query Frame = 0
BLAST of CsGy6G036030 vs. NCBI nr
Match: XP_011658525.1 (putative F-box/LRR-repeat protein 23 [Cucumis sativus] >KGN49440.1 hypothetical protein Csa_003071 [Cucumis sativus]) HSP 1 Score: 193 bits (491), Expect = 4.38e-56 Identity = 120/238 (50.42%), Postives = 140/238 (58.82%), Query Frame = 0
BLAST of CsGy6G036030 vs. NCBI nr
Match: KAA0052509.1 (F-box protein SKIP19-like [Cucumis melo var. makuwa] >TYK13315.1 F-box protein SKIP19-like [Cucumis melo var. makuwa]) HSP 1 Score: 150 bits (378), Expect = 2.60e-40 Identity = 94/183 (51.37%), Postives = 110/183 (60.11%), Query Frame = 0
BLAST of CsGy6G036030 vs. NCBI nr
Match: XP_038883506.1 (F-box protein SKIP19-like [Benincasa hispida]) HSP 1 Score: 127 bits (319), Expect = 4.67e-30 Identity = 95/249 (38.15%), Postives = 135/249 (54.22%), Query Frame = 0
BLAST of CsGy6G036030 vs. NCBI nr
Match: XP_022146630.1 (F-box protein SKIP19-like [Momordica charantia]) HSP 1 Score: 122 bits (307), Expect = 1.61e-28 Identity = 86/220 (39.09%), Postives = 116/220 (52.73%), Query Frame = 0
BLAST of CsGy6G036030 vs. ExPASy TrEMBL
Match: A0A0A0KI84 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G525270 PE=4 SV=1) HSP 1 Score: 193 bits (491), Expect = 2.12e-56 Identity = 120/238 (50.42%), Postives = 140/238 (58.82%), Query Frame = 0
BLAST of CsGy6G036030 vs. ExPASy TrEMBL
Match: A0A0A0KP25 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G525280 PE=4 SV=1) HSP 1 Score: 166 bits (420), Expect = 4.05e-48 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of CsGy6G036030 vs. ExPASy TrEMBL
Match: A0A5D3CNY7 (F-box protein SKIP19-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009390 PE=4 SV=1) HSP 1 Score: 150 bits (378), Expect = 1.26e-40 Identity = 94/183 (51.37%), Postives = 110/183 (60.11%), Query Frame = 0
BLAST of CsGy6G036030 vs. ExPASy TrEMBL
Match: A0A6J1CXS5 (F-box protein SKIP19-like OS=Momordica charantia OX=3673 GN=LOC111015784 PE=4 SV=1) HSP 1 Score: 122 bits (307), Expect = 7.80e-29 Identity = 86/220 (39.09%), Postives = 116/220 (52.73%), Query Frame = 0
BLAST of CsGy6G036030 vs. ExPASy TrEMBL
Match: A0A6J1EGI8 (F-box protein SKIP19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433172 PE=4 SV=1) HSP 1 Score: 112 bits (281), Expect = 4.21e-25 Identity = 87/237 (36.71%), Postives = 120/237 (50.63%), Query Frame = 0
BLAST of CsGy6G036030 vs. TAIR 10
Match: AT4G05460.1 (RNI-like superfamily protein ) HSP 1 Score: 89.0 bits (219), Expect = 7.8e-18 Identity = 73/239 (30.54%), Postives = 111/239 (46.44%), Query Frame = 0
BLAST of CsGy6G036030 vs. TAIR 10
Match: AT4G05470.1 (RNI-like superfamily protein ) HSP 1 Score: 75.1 bits (183), Expect = 1.2e-13 Identity = 67/237 (28.27%), Postives = 106/237 (44.73%), Query Frame = 0
BLAST of CsGy6G036030 vs. TAIR 10
Match: AT4G05490.1 (RNI-like superfamily protein ) HSP 1 Score: 73.9 bits (180), Expect = 2.6e-13 Identity = 67/240 (27.92%), Postives = 103/240 (42.92%), Query Frame = 0
BLAST of CsGy6G036030 vs. TAIR 10
Match: AT4G05475.1 (RNI-like superfamily protein ) HSP 1 Score: 71.6 bits (174), Expect = 1.3e-12 Identity = 70/253 (27.67%), Postives = 112/253 (44.27%), Query Frame = 0
BLAST of CsGy6G036030 vs. TAIR 10
Match: AT4G05497.1 (RNI-like superfamily protein ) HSP 1 Score: 69.7 bits (169), Expect = 4.9e-12 Identity = 60/219 (27.40%), Postives = 92/219 (42.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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