CsGy6G035890 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G035890
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr6: 31569449 .. 31575313 (-)
RNA-Seq ExpressionCsGy6G035890
SyntenyCsGy6G035890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATATTGACTTGCTTACCCTTGCGATGCCCTGTTTCGCCGCGAAGCTGAAGAACGACAACGGAGCGGCCAAGCACTGGTTAATATTTCATATTCAGAGCGGCAGTAAAGAGCGCCTATTGGACGAATTCGGTATTCATTCGTTCGCCAATTTCTTCACTGTTGCTCCTGCATTATTATGATATGTTATTCATTATCAACTTCTATTTTAAATTTGGAAGAAAGCAAATCAGATTCCATGAACTGAATTATCTAAATAAGTTTCAACGAGGTGTTGCCAATTCTGATTTTGTTCTGAATGGAGTTGTTTACAAGTGCTTCGACCATTTTTGTTTACACCCTTTAGCATGTACTGAATTTGGTGCATTTTTCTCGTCTTCTTCTTGGAGAGATTCGAGTTTTGGTCGGAGTTTAAGAACTTACTGCACTGATATTTATGGGAGAAATAATGGGTCTGATGCTGCAAATGAAGAATTTCAGAAAAATGATTTGGAGGATACCGGAGATTCGAGTTTCTTTGGAAGTCCCAGTGAGGAACATGGAAAGGAACGGCACTTTAAGTTCGGTGATGATATAGAGGCTGAGGAGTCCAATGACGAAGAAGAGGAAGATGGGGATCTTGGTGATGCTGCGGATCTTTTGGGGTCTAATTTGTCTAATAGAGATCCTGGACAAGGAAATGATTGCAAAAAAGTTGAAATTGGTGAAGATGTATTTAGACATTCCTTAGTGAGAGATACTTGTAAACTGATCCAGCTAAGTTCCTCTTGGAATCGAAAGTTTGAAGGGGAATTGAGGTATTTAGTAAGAAGCCTAAATCCGCTGCAGGTTTGTGCTGTTTTGCTCTCTCAGGAAGACGAAAGAAATGCTTTGCGGTTCTTCTACTGGGCAGATAGATTGTGGCGGTATAGACATGATTCATCTGTGTACTTAGTTATGCTTGAGATACTCAGTAAGACCAAATTATGTCAAGGTGCTAAACGTATTCTCCGACTTATGACTCGTAGAAGAATTCAGCTTTGTCCTGAAGCTTTTGGTTTTGTAATGGTGTCATATAGCCGGGCAGGAAGATTAAGGGATGCAATGAAGGTCTTGACCTTGATGCAGAAGGCAGGTGTTGAGCCTAATTTGTCTATTTGTAACACTGCAATCCATATTTTGGTCATGGGAAATGAGTTAAAGAAGGCGTTGAGGTTTGCAGAACGTATGGTTCTTATTGGCATTGCTCCAAATGTTGTGACTTATAACTGTTTAATCAAGGGCTATTGTAATGTGCATCAGGTTGACCAAGCCATGGAACTAATTGATCAAATGCCATCTAAGGGATGTTCTCCTGATAAAGTTAGTTACTATACTGTCATGGGACTCCTCTGTAGAGATAAGAGGCTGAATGAAATTAGGGAATTGATTAAGAAAATGCAGACGGACAGTAAATTATTACCAGATCACGTTACTTACAATTCTCTAATCCAGATGCTTTCAAAGCATGGCCACGGAGATGAGGCTCTAGAGATTCTGCAGGAAGCAGAAAAATTGCGATTTAAGGTTGACAAGGTTGAGTATAGTGCAATAGTTCATGCATACTGCAAGGAAGGAAAGATTCAGAAGGCAAAAGAGCTTGTTAGTGAAATGTTCTCCAAGGGCTGTGATCCAGATGTTGTAACGTACACCTCTGTCCTTGATGGGTTTTGTCGCATAGGGAAACTTGATCAAGCAAAAAAGATGATGCAACAGATGTACAAGCATCACTGCAAACCTAATGCTGTAACATATACAACATTTCTAAATGGTCTCTGCCGCAATGGGAAATCTTTAGAAGCTAGAAAGATGATGAATATGAGTGAGGAAGAGTGGTGGACACCTAATGCCATTACTTATAGTGTTGTAGTTCATGGGTTGCGCCGTGAAGGGAAATTGAACGAAGCTTGTGATGTAGTCAGGGAGATGATTGGAAAAGGTTTCTTTCCAAATCCAGTTGAAATTAATTTATTGGTACATTCTCTTTGCAGGGATGGGAAACCACGTGAAGCTAATCAGTTACTGAAGGAGTGCATGAACAAGGGTTGTGCTGTTAATGTAGTTAATTTCACCACTGTCATTCATGGATTTTGTCAGAAAGATGATTTGGAAGCTGCACTGTCATTGCTGGATGATATGTACCTTTGTAACAAGCACCCTGATACCGTGACATACACAGCATTAATTGATGCATTGGCCAAGACTGACCGTATAGAAGAAGCCACTGAACTTACAATGAAGATGCTGAGGCAAGGATTGGTTCCTTCTCCTGTTACATACAGGTCTGTCATCCACCAGTATTGTCGAAAGGGTAGGGTAGAAGATTTGTTGAAATTACTGAAGAAGATGCTGTTGAAAAGCAGATTTCAAACAGCATATAATTTAGTTATTGAGAAACTATGTAAGTTTGGATACCTCGAGGAGGCCAATAGCCTTTTAGGTGAGGTTTTGCGGACGGCTTCAAGAACCGATGCTAAAACTTGTCATGTACTCATGGAGAGTTATTTAAATGTTGGAATTCCTATGTCAGCATATAAAGTTGCTTGTAGAATGTTCAATAGAAATCTAATTCCTGATTTAAAGTTATGTGAGAAGGTCAGCAAGAGGCTTGTGGTAGAAGGAAAATTGGAGGAGGCCGACAGGCTTGTCTTACGGTTTGTTGAGCGTGGTCATGTGTCGGCTCAAGAACCAAAACACTTGCACAACTAAGATTTCTAATAAATTATCATGGTTGACTTCATATGAAAACAATCATTCTATGCTGTGGGTTGGATAAATCTGCTTCCAGGTTTCAGATTCTTATCACTTGCTTTGTGGGTTCTTTCTGATATCCTGTTTTGCATTGTGCTATCACAGATGAATATTCAGAGTTGTTGGATCCATCATGTATTTCTTTTGTAATTTTGGTTGCGGATGCCAGCTGTTATAATCACCGTAGAATAGTTGCACACACATATATTCTTTAGTTTTGAAAATATTTGTAGTTATTCCCTGGAATATCCTATAGGATTTTACCAAGCTCTACTGCAGAGCTAGCTAGTAGCACTGTGGAATTTATCAAGAGCTGATCCGATCCAATTTATCCTAACACACGTATGACTAAATAACAAATGAAGAAACAAAGTATGAAATGAAGATACCGGCTGCTTTATGGATTTCAGTATCAAGTTAGTGTAATAGTTGTCGTACCTTATATTTCTTTTTCCTTTTGCTTCTGGGGTTGAGTATTAGGAACACAAAAAGGGTGGTATTCTATTCTTTTATAAAATTTAAGATTCACAAACCGATGACATAAGTTTCTATCTCTCCTCAAGGTCTCAATGTCTAAAATAAAATAGGTGTCTATGCAGATGAGAATTGCATGTACAAAATCCATTTGCTAAAAGCTGGCAGGATAATAGATGATATGGGGTACTCAGTCCTCATATTCTTGTTGTAGCTGCTTGTGATAGGGTTTGGGTCGGAATGTACTCAGGGTAAAATTATTTGTTTCTTTTGTTTTATGATAAACTTTGCCACAAAGTTTGCAGTTTGAATCTTGTGCTGTTTCTCCTACAGGCTGGAAAGAAGATCTTTTGCTGTTCCATTTTTGTTGGCTCTTTTCTGGGTCCCTGTCACCTACTGCCCACATCTCTCTTGAATGAAGTGGTTGGTCCAATAGGATCAACTTTGTCTTTTGATTCAATTGTTTTTGGTAATTCAAATCAAAAAGGGGGAAAAAATCATTAATGCTATGACTACATGCTGTTGCGACATCGACTGTTATAAGTACGGCTTTACGTAGCTTAAATGTTACCTGCTGTAGTACTTCTTTTCCAATGACTTGTTCCTAGCTCTAAGTGCTAGGTTGGGTACTAGAATGCTCTTTTGAAAGATCCTGAATGTTGGTTGGGGGCCATGGGATTATTGGTAACGGGTGAGGAGCTTACCCTTTCTAATGTAATCAGACAGTATGATCACTGGAGCGTGGGCCCACGATTTTGGTTCATATCAAGGCAGCCCAGTGCCTCACATATATTTAAAGTTTGGAGCTGGAGTACAAAGTTGTAAAGAAGTGATTGAATATAACTTTGGAGATGCTCTCTGTCTTTCCCTCTAATTCCAAATTTAATGGTTTAAGCCCTCTAGTTAGCGCTAAACTGGATTACAACAGAAAATCCTTGAGTTCATACATCATGGGCATCTTCCCTGATGTAGGAAGGTCCACCACTGATAGTTTCTTTGGCAGATGTTTGAACATGATTTCAGTTCACAAGAGCAAATAGAACTATTGGTTATTAGTTGTTACCTTTCTGCTCGTCTCCCATGTCAGTGGTATACCTCTATGCAAACAAAATTACATTATCAGTCACAAAGTTCTCCATATCAGGTTTGTGTGTACGCGGTAAGTGAACACAAATTGTTAGTACGTCTAGTCTGGTCAGTTTCTGACTCAGCAATCAATTTTTAGTTTCTAATTCTATAAGGTGAATTGGTTGGTATGCCATGGATGGCTTAATACGGTTGTGAGACTACAAAAGAAATGTCAGCATATGATTCATATGATGCAACTATTGAGTGGACGTAACTTTTACGGAAAGTGTAAGATCATTTGAGTTAATGCGATTGAAGTAATATCGTGGATTCTTTGCTTGGAGAGAAACTATCAAAATTTACATTAACTGGGAAGGACGTGGGAGATTATGCCTTAAACCAAATGCATATGGTTTGATGATTTATTCTTCTCAATGTACACTACTATTCTTAGCAATTAACTTCTGTAGGAGTTTTTTCTGGAACTCCTAACGAGGGATTGTAATCTTTGCATTTAGCCTTTCAATATATCAATGAAAAGCATCTCTGCCTTTCATTTCGAAAGAGAAAAAAAAGGAGAAATTTGCTCTCCCCTGCCCTGATTTGTGCTGTGGAGTTCAGTTTGCATTTTTATACCTTTTCATTGGTCTTCATTGATCAGAGCTCGATCTTAGACTACATGACTTCGTAGTTTATCATCGTTTTTTAAAGAAAAGTAAGTTTATTATTATTATCTATTTATTTTCATTATGCTTAGACTCTCCTCTTGAAAGGCCTATGATACTGTAATTAGGCTTTTCTGATGCTTTCATTTTTCAACAAACAAGCCAAATTGCATACTTCAGAAAGCATATGGAGCAAGTTGAGTCATCAAAGCCAATGGTATGGCATTGTTGCTTATACTCTACGAAGTATCTTACACTTGCAAGCATACAAGAGGCTTTACAATCCTGAAACTTCTTCTGAGTGTATTCTACTTTTCTTTTCATTATTATGAAATGAATGTATCCCTTCACTCCCTTTTATTTGGATGCATTTGCATGTAAAATTGACATAGTTGTCTTCAAAACTGAACTGAGTTCAACAGAATTCTCTTTTACTGGTCTTTTTTTAATGCAGTATCATTATTGCAGAGGATAAGATGGAGTCGGGAGTGATTTCTTTGGCAGAGTTTCCAAAGTCGCTGTTCCTCTTGTGGACGGGAAATTGTAAGTCTATGAATGATGAATGATAGTCTATTATTACTAGGTTTGGAATGTCTATTAGTTAAGGGCCAAGGCACATCTGAAAATGTCTTTATTGACTTTGTTAGGTTATTTCTGTTACATGTTTGATTCCTTTTTGAAAAGGCTGAGACTTATGACAAATGTCTGCCAAGTGGGTAGGCCATAAGTCTTAATTATTACTTCCTGAAGGGGCTCCTTTTAATGTATTATTTTTTGCCCCCTTCTATTTTTCTTGTATTATGAGGAATTCAAGTGCTTCAACAACTGGAATTGAAGGACAAGTTCCAGGCATTCAAGGTATCAAAATCAAAGTCAAATCCAATGTCA

mRNA sequence

ATGAATATTGACTTGCTTACCCTTGCGATGCCCTGTTTCGCCGCGAAGCTGAAGAACGACAACGGAGCGGCCAAGCACTGGTTAATATTTCATATTCAGAGCGGCAGTAAAGAGCGCCTATTGGACGAATTCGTATCATTATTGCAGAGGATAAGATGGAGTCGGGAGTGATTTCTTTGGCAGAGTTTCCAAAGTCGCTGTTCCTCTTGTGGACGGGAAATTGAATTCAAGTGCTTCAACAACTGGAATTGAAGGACAAGTTCCAGGCATTCAAGGTATCAAAATCAAAGTCAAATCCAATGTCA

Coding sequence (CDS)

ATGAATATTGACTTGCTTACCCTTGCGATGCCCTGTTTCGCCGCGAAGCTGAAGAACGACAACGGAGCGGCCAAGCACTGGTTAATATTTCATATTCAGAGCGGCAGTAAAGAGCGCCTATTGGACGAATTCGTATCATTATTGCAGAGGATAAGATGGAGTCGGGAGTGA

Protein sequence

MNIDLLTLAMPCFAAKLKNDNGAAKHWLIFHIQSGSKERLLDEFVSLLQRIRWSRE*
Homology
[Close]
BLAST of CsGy6G035890 vs. NCBI nr
Match: KGN49427.1 (hypothetical protein Csa_004430 [Cucumis sativus])

HSP 1 Score: 92.4 bits (228), Expect = 4.01e-23
Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 0 

Query: 1  MNIDLLTLAMPCFAAKLKNDNGAAKHWLIFHIQSGSKERLLDEF 44
          MNIDLLTLAMPCFAAKLKND GAAKHWLIFHIQSGSKERLLDEF
Sbjct: 1  MNIDLLTLAMPCFAAKLKNDKGAAKHWLIFHIQSGSKERLLDEF 44

[Close]
BLAST of CsGy6G035890 vs. ExPASy TrEMBL
Match: A0A0A0KM28 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524640 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.94e-23
Identity = 43/44 (97.73%), Postives = 43/44 (97.73%), Query Frame = 0 

Query: 1  MNIDLLTLAMPCFAAKLKNDNGAAKHWLIFHIQSGSKERLLDEF 44
          MNIDLLTLAMPCFAAKLKND GAAKHWLIFHIQSGSKERLLDEF
Sbjct: 1  MNIDLLTLAMPCFAAKLKNDKGAAKHWLIFHIQSGSKERLLDEF 44

The following BLAST results are available for this feature:
BLAST of CsGy6G035890 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G035890 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49427.14.01e-2397.73hypothetical protein Csa_004430 [Cucumis sativus][more]
BLAST of CsGy6G035890 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KM281.94e-2397.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524640 PE=4 SV=1[more]
BLAST of CsGy6G035890 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G035890.2CsGy6G035890.2mRNA