CsGy6G035540 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G035540
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	MADS-box domain-containing protein
Location	Gy14Chr6: 31307047 .. 31310273 (+)
RNA-Seq Expression	CsGy6G035540
Synteny	CsGy6G035540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGATGTGGTCACTCAAGGTCGTCCTTGTCGATATTGATGATCCACGCAGTGAAGGTAAATTCTTCATTAAGCATTATTAACCTTTTGAAGGAGCTCCCTTTTATGGATCTTCATGCATTGGTTCTTTTCAGAAGTCTTTCTAGATTTCTTACTGTATACTATTGAAACTGAAGCTTTTGCTGACTAAACATTCCCAATCACTTCACTTCGGCATAACAAATCATCTCGTAAATGTTTTAAAGCTTTGAACAACAATTGAACGGAATTGATGAACAGATTCTTGAATAATGTTACATGTTTCCATTTTTTAGTAAGAGGATGACAGTATTTTGAATCCATGGCAATGTATGATGTTTTTGGGTCATGAAAATTGGTAAATTACATGGAAGGTAAAAAGTTTTCTGAAAAAAAAAAAAACAATTTAATTCTTAAAGATATTTAAGTAAATTGTTTATGTTTTATGAAAGAAAAAATTTATTGATTACATCATAATTTTAAAACCGTGGGGGGATTACTATAGCCCATAGAAAACAGCAGTATACAAGGATAAAGATTCCTTCTACGAGGAACAACTTTTATTTAAAAAAATAGGAAGAGGAAAATAACTTCTAAATTGAAATTGTGAATAAATAAAAATCAAATTATACTTGGCTTAGAGGTTTGTATCACTTAAAATTCTAAACAATTAGTTGCATGATCTTGTTTAGTAATAATTTCTATTTTTTTAGACACACTGTCTAATGTTACTTTGCTTCTATATTTCTTACTTGTTATTGACCTTCTACCAATATTTTAGAAAATCAAAGTTAATTATTTAGAACTAAAAAAAACAATAAAATTTATTTTAATTTTTGAAATTTGGCTAAAAGGGTTGATTTTCTTTAGTTTTCAAAATTGAACAACATTGGTAGAAAATATCTATTAAAGTAAAGAATAATTCTGAGGTGGGAGGGATGCATATAAACATAATGACTTGATTATCAAAAATTAAAAATTGAAAATCAAATTGTCACCAAAATAATGCCTGAGGTATTAGGATTTATTTGTACTTAAAGGAATATTAGAGATAAAGGTTAGAATCGAATTGTCATCTTAGATTTAACATTTCCGTTTTACTAAATTAAATCTTAAACTTGACTAATGAACTTTATATATTTATATATATATATATATATATATATTCGTAATCAAATGGTTAGAGTTCTTTGAATGAGTGGATGAAATTATTTTTGCATGTTAGTTAATTTATCAATGTTCTTTCTTCAATCACTGGGACAATATGAGTTGATGAATTCGAAAACGATACCTTTTGATTATAAGATAAATGTCATTTGACCAATATAGGCTGTGTACATAAATTTCAATTATACCAAAGAAATAACCATTTATTGTTAATAAAATATCAAATCATAAGTTTAATCAATGAAACTTTCATCATTCTGATTAATTAGCTATATCTCTAAATTAAAAAAAAAAAAATCTAGCATCTTCAAATTTCTGTCTAAAAAATATTTGACATGTTCAACCTTCTACAAATGACCTAAATATTAAACATGACATCAAATTTTGTGATGAATATGGATATTCACCTTAAAATTCAAGTTTTCACATCAAAAAGTTCAACACTATGTGTTCATTAGTTTTGTAAATTTGAGATTATGTCAAATTGTTAATTGAATACAAATATTGTTAAAGAGATTTTATAACAAACATTTTGGGGTGTTTGATGCATATTATTATAGTTTGAGTTATTATAATCTATATTTAGGAAAGTAAGAAACATTGAAAGGAGGGAGTGAAGTATAGTGATATATATAAGAGACGAGAGATGAGGAATAATGAAAAGGAGTTAGGAATAGAAGAAATAAGGAAAAAAGTAGAATTGTGATAATCTTTAGGACAAATATGGAGTGGGCTAAAACGACTCTTTAAGGTTTTGAGACAACTTTAGACCCAAAATTTAAAATTTTAAAACTAAATTAGATACTTAGAATACACAAGCTTGTACAAAAACTAGATTTAATTTAACCTAGATTAATTAAGAAAATAAACAAAATGAGTGAAACATTTTGAATGGGTGGCTGCCCATTGTATAGAAAGAGAGGGCCAAATAGTATGAAAACCCACTAAGAAATTAGTGTAGAGTGTGAGGAAGAAGAGGCCAACTCAGATATTTAAATGCCTTAACGTTGTTACAACACAAACCTCACTCCTTTCCACTACTTGCTATATATGTCAATCCAAATCCAACACCAGAACATAAAGATAATATCATAACATTCAAATCAAAAGAATAATCCCTCAAATTCTCCATCCCCATCTTCCTCAAAACACAACTCTTGTTCCTCTCATGGACTCCTCCGCCCCAAACGCCCCCGTCGCCGGCAACAAGAAGCAAACAAAGGGACGACAAAAGATCGAAATGAAGAAGATCGTAAACGAAGACGATCGGTTAATTACATTTTCCAAACGGAGGTCAGGCATCTACAAGAAGGCAAGCGAATTAGCTACCTTATGTGGGGCTGAAGTTGGAGTTGTTGTGTTTTCGCCTGCAGGAAAGCCATTCTCGTTTGCACATCCATGCATTGAAACCATCGCAAACAAATTTCTGAATGGCAACAAGAACAACAAGGGAAACAACGATGATAACAATAACAACGGCGATAGTAGCAGCAGCAACAACAACAACAACAATAGCAACAACAACAACAACAGCAACGCAGCGCACCCGCTCGTAGAGGCTCACCGACGAGTGAGAATCAACGAGTTGAACCAGCAACACAATCAACTTCTAAGCCAACTAGATGCAGAGAAAGAGAAAGGAAAAGCACTTGAGAAGCTAAAAAGGGTAAGAGGAAATGGGAGAGGTTGGTGGGAAACTCCTACAGAAGAATTGGGAATAGAGGAATTGCAAGAAGTGGATGCATCATTTGGAGAAATATATTCAAATGTGTGTCATCAACTGAAACAAAGAGGAGTTATTGGATGTTGTTCTTATAATAATTATAACAACAATATGAATAATTCCTCTATGGGATTTCCATTAACTAATGATCAATTAGGGGAAGAAACAATTCCTTTTAACATTTTGGCAGGAAACGTTCCTCCTCCTCTTTTTCCTCTTCCTCCCCCACCTCCTTATCTTCCTCCTCCTCCTCAATTTGATTTCGGAGAACAACAACAGCATCCTCATCCTCATCCTCCTCCTCATCCTCATCCATGA

mRNA sequence

ATGCTGATGTGGTCACTCAAGGTCGTCCTTGTCGATATTGATGATCCACGCAGTGAAGGAAAGCCATTCTCGTTTGCACATCCATGCATTGAAACCATCGCAAACAAATTTCTGAATGGCAACAAGAACAACAAGGGAAACAACGATGATAACAATAACAACGGCGATAGTAGCAGCAGCAACAACAACAACAACAATAGCAACAACAACAACAACAGCAACGCAGCGCACCCGCTCGTAGAGGCTCACCGACGAGTGAGAATCAACGAGTTGAACCAGCAACACAATCAACTTCTAAGCCAACTAGATGCAGAGAAAGAGAAAGGAAAAGCACTTGAGAAGCTAAAAAGGGTAAGAGGAAATGGGAGAGGTTGGTGGGAAACTCCTACAGAAGAATTGGGAATAGAGGAATTGCAAGAAGTGGATGCATCATTTGGAGAAATATATTCAAATGTGTGTCATCAACTGAAACAAAGAGGAGTTATTGGATGTTGTTCTTATAATAATTATAACAACAATATGAATAATTCCTCTATGGGATTTCCATTAACTAATGATCAATTAGGGGAAGAAACAATTCCTTTTAACATTTTGGCAGGAAACGTTCCTCCTCCTCTTTTTCCTCTTCCTCCCCCACCTCCTTATCTTCCTCCTCCTCCTCAATTTGATTTCGGAGAACAACAACAGCATCCTCATCCTCATCCTCCTCCTCATCCTCATCCATGA

Coding sequence (CDS)

ATGCTGATGTGGTCACTCAAGGTCGTCCTTGTCGATATTGATGATCCACGCAGTGAAGGAAAGCCATTCTCGTTTGCACATCCATGCATTGAAACCATCGCAAACAAATTTCTGAATGGCAACAAGAACAACAAGGGAAACAACGATGATAACAATAACAACGGCGATAGTAGCAGCAGCAACAACAACAACAACAATAGCAACAACAACAACAACAGCAACGCAGCGCACCCGCTCGTAGAGGCTCACCGACGAGTGAGAATCAACGAGTTGAACCAGCAACACAATCAACTTCTAAGCCAACTAGATGCAGAGAAAGAGAAAGGAAAAGCACTTGAGAAGCTAAAAAGGGTAAGAGGAAATGGGAGAGGTTGGTGGGAAACTCCTACAGAAGAATTGGGAATAGAGGAATTGCAAGAAGTGGATGCATCATTTGGAGAAATATATTCAAATGTGTGTCATCAACTGAAACAAAGAGGAGTTATTGGATGTTGTTCTTATAATAATTATAACAACAATATGAATAATTCCTCTATGGGATTTCCATTAACTAATGATCAATTAGGGGAAGAAACAATTCCTTTTAACATTTTGGCAGGAAACGTTCCTCCTCCTCTTTTTCCTCTTCCTCCCCCACCTCCTTATCTTCCTCCTCCTCCTCAATTTGATTTCGGAGAACAACAACAGCATCCTCATCCTCATCCTCCTCCTCATCCTCATCCATGA

Protein sequence

MLMWSLKVVLVDIDDPRSEGKPFSFAHPCIETIANKFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPLVEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKRVRGNGRGWWETPTEELGIEELQEVDASFGEIYSNVCHQLKQRGVIGCCSYNNYNNNMNNSSMGFPLTNDQLGEETIPFNILAGNVPPPLFPLPPPPPYLPPPPQFDFGEQQQHPHPHPPPHPHP*

Homology

[Close]

BLAST of CsGy6G035540 vs. NCBI nr
Match: XP_011658286.1 (agamous-like MADS-box protein AGL29 [Cucumis sativus])

HSP 1 Score: 426 bits (1096), Expect = 7.71e-149
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 20  GKPFSFAHPCIETIANKFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPL 79
           GKPFSFAHPCIETIANKFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPL
Sbjct: 69  GKPFSFAHPCIETIANKFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPL 128

Query: 80  VEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKRVRGNGRGWWETPTEELGIEELQ 139
           VEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKRVRGNGRGWWETPTEELGIEELQ
Sbjct: 129 VEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKRVRGNGRGWWETPTEELGIEELQ 188

Query: 140 EVDASFGEIYSNVCHQLKQRGVIGCCSYNNYNNNMNNSSMGFPLTNDQLGEETIPFNILA 199
           EVDASFGEIYSNVCHQLKQRGVIGCCSYNNYNNNMNNSSMGFPLTNDQLGEETIPFNILA
Sbjct: 189 EVDASFGEIYSNVCHQLKQRGVIGCCSYNNYNNNMNNSSMGFPLTNDQLGEETIPFNILA 248

Query: 200 GNVPPPLFPLPPPPPYLPPPPQFDFGEQQQHPHPHPPPHPHP 241
           GNVPPPLFPLPPPPPYLPPPPQFDFGEQQQHPHPHPPPHPHP
Sbjct: 249 GNVPPPLFPLPPPPPYLPPPPQFDFGEQQQHPHPHPPPHPHP 290

[Close]

BLAST of CsGy6G035540 vs. NCBI nr
Match: XP_038881522.1 (agamous-like MADS-box protein AGL61 [Benincasa hispida])

HSP 1 Score: 268 bits (686), Expect = 1.04e-86
Identity = 162/222 (72.97%), Postives = 179/222 (80.63%), Query Frame = 0


Query: 20  GKPFSFAHPCIETIANKFLNG-NKNNKGNN---DDNNNNGDSSSSNNNNNNSNNNNNSNA 79
           GKPFSFAHPCIE++ANKFLN  NKNNKGNN   DDNNN      +NNN+N++ +NNN NA
Sbjct: 69  GKPFSFAHPCIESVANKFLNNDNKNNKGNNNDKDDNNN----DDNNNNDNDNPDNNNINA 128

Query: 80  AHPLVEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKRVRGNGRGWWETPTEELGI 139
            HPLVEAHRRVRINELNQQHNQ+LSQLD EKE+GK LE LK+VRGNGRGWWETPTEELGI
Sbjct: 129 THPLVEAHRRVRINELNQQHNQILSQLDGEKERGKTLENLKKVRGNGRGWWETPTEELGI 188

Query: 140 EELQEVDASFGEIYSNVCHQLKQRGVIGCCSYNNYNNNMNNSSMGFPLTNDQLGEETIPF 199
           EEL+EVDASFGE+Y NVC QLKQRG+IG CSY +Y+NN   SSMGF +    +GEETIPF
Sbjct: 189 EELEEVDASFGELYQNVCDQLKQRGIIGPCSYKHYDNN---SSMGFTIN---VGEETIPF 248

Query: 200 NILAGNVPPPLFPLPPPPPYL---PPPPQFDFGEQ-QQHPHP 233
           NIL GNVP P  P   PPPYL   PPPP FDFG Q QQH HP
Sbjct: 249 NIL-GNVPSPFLP---PPPYLIPPPPPPHFDFGGQHQQHHHP 276

[Close]

BLAST of CsGy6G035540 vs. NCBI nr
Match: KAA0052555.1 (agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa] >TYK13271.1 agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa])

HSP 1 Score: 211 bits (537), Expect = 4.68e-65
Identity = 117/132 (88.64%), Postives = 124/132 (93.94%), Query Frame = 0


Query: 20  GKPFSFAHPCIETIANKFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPL 79
           GKPFSFAHPCIETIANKFLN    NKGN DDNNNN DSSSS+NNN+N+N + N+NAAHPL
Sbjct: 69  GKPFSFAHPCIETIANKFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPL 128

Query: 80  VEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKRVRGNGRGWWETPTEELGIEELQ 139
           VEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLK+VRGNGRGWWETPTEELGI+ELQ
Sbjct: 129 VEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKKVRGNGRGWWETPTEELGIDELQ 188

Query: 140 EVDASFGEIYSN 151
           EVDASFGEIYSN
Sbjct: 189 EVDASFGEIYSN 200

[Close]

BLAST of CsGy6G035540 vs. NCBI nr
Match: XP_022926768.1 (agamous-like MADS-box protein AGL61 [Cucurbita moschata])

HSP 1 Score: 205 bits (522), Expect = 1.03e-61
Identity = 123/212 (58.02%), Postives = 139/212 (65.57%), Query Frame = 0


Query: 20  GKPFSFAHPCIETIANKFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPL 79
           GKPFSFAHPCIE++ANKFL+ N     N                             HPL
Sbjct: 106 GKPFSFAHPCIESVANKFLDENPQPNDN----------------------------THPL 165

Query: 80  VEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKRVRGN-GRGWWETPTEELGIEEL 139
           VEAHRR+RINELNQQHNQLLSQLDAEKEKGKALEKLK+VRGN GRGWWE+PTEELGIEEL
Sbjct: 166 VEAHRRLRINELNQQHNQLLSQLDAEKEKGKALEKLKKVRGNNGRGWWESPTEELGIEEL 225

Query: 140 QEVDASFGEIYSNVCHQLKQRGVIGCCSYNNYNNNMNNSSMGFPLTNDQLG-EETIPFNI 199
           Q+VD S GE+Y NVCH+LK+RGV+G  SY+  N      ++GF    D  G EETIPFNI
Sbjct: 226 QQVDGSLGELYQNVCHELKERGVLGSSSYSASN------TLGF----DHAGREETIPFNI 279

Query: 200 LAGNVPPPLFPLPPPPPYLPPPPQFDFGEQQQ 229
           LA          P    YLP P  FD+G+QQQ
Sbjct: 286 LATGAAAAAAAGPSSATYLPDPNPFDYGQQQQ 279

[Close]

BLAST of CsGy6G035540 vs. NCBI nr
Match: KAG6594479.1 (Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026476.1 Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201 bits (512), Expect = 8.52e-61
Identity = 122/212 (57.55%), Postives = 138/212 (65.09%), Query Frame = 0


Query: 20  GKPFSFAHPCIETIANKFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPL 79
           GKPFSFAHPCIE++ANKFL+ N     N                             HPL
Sbjct: 63  GKPFSFAHPCIESVANKFLDENPQPNDN----------------------------THPL 122

Query: 80  VEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKRVRGN-GRGWWETPTEELGIEEL 139
           VEAHRR+RINELNQQHNQLLSQLDAEKEKGKALEKLK+VRGN GRGWWE+PTEELGIEEL
Sbjct: 123 VEAHRRLRINELNQQHNQLLSQLDAEKEKGKALEKLKKVRGNNGRGWWESPTEELGIEEL 182

Query: 140 QEVDASFGEIYSNVCHQLKQRGVIGCCSYNNYNNNMNNSSMGFPLTNDQLG-EETIPFNI 199
           Q+VD S GE+Y NVCH+LK+RGV+G  SY+  N      ++GF    D  G EETIPFNI
Sbjct: 183 QQVDGSLGELYQNVCHELKERGVLGSSSYSASN------TLGF----DHAGREETIPFNI 234

Query: 200 LAGNVPPPLFPLPPPPPYLPPPPQFDFGEQQQ 229
           LA        P      YLP P  FD+G+Q Q
Sbjct: 243 LATGAAAAAGPSSAT--YLPDPNPFDYGQQPQ 234

[Close]

BLAST of CsGy6G035540 vs. ExPASy TrEMBL
Match: A0A0A0KNT7 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G522745 PE=4 SV=1)

HSP 1 Score: 426 bits (1096), Expect = 3.73e-149
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 20  GKPFSFAHPCIETIANKFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPL 79
           GKPFSFAHPCIETIANKFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPL
Sbjct: 69  GKPFSFAHPCIETIANKFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPL 128

Query: 80  VEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKRVRGNGRGWWETPTEELGIEELQ 139
           VEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKRVRGNGRGWWETPTEELGIEELQ
Sbjct: 129 VEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKRVRGNGRGWWETPTEELGIEELQ 188

Query: 140 EVDASFGEIYSNVCHQLKQRGVIGCCSYNNYNNNMNNSSMGFPLTNDQLGEETIPFNILA 199
           EVDASFGEIYSNVCHQLKQRGVIGCCSYNNYNNNMNNSSMGFPLTNDQLGEETIPFNILA
Sbjct: 189 EVDASFGEIYSNVCHQLKQRGVIGCCSYNNYNNNMNNSSMGFPLTNDQLGEETIPFNILA 248

Query: 200 GNVPPPLFPLPPPPPYLPPPPQFDFGEQQQHPHPHPPPHPHP 241
           GNVPPPLFPLPPPPPYLPPPPQFDFGEQQQHPHPHPPPHPHP
Sbjct: 249 GNVPPPLFPLPPPPPYLPPPPQFDFGEQQQHPHPHPPPHPHP 290

[Close]

BLAST of CsGy6G035540 vs. ExPASy TrEMBL
Match: A0A5A7UFR8 (Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008890 PE=4 SV=1)

HSP 1 Score: 211 bits (537), Expect = 2.27e-65
Identity = 117/132 (88.64%), Postives = 124/132 (93.94%), Query Frame = 0


Query: 20  GKPFSFAHPCIETIANKFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPL 79
           GKPFSFAHPCIETIANKFLN    NKGN DDNNNN DSSSS+NNN+N+N + N+NAAHPL
Sbjct: 69  GKPFSFAHPCIETIANKFLNDKNKNKGNKDDNNNNDDSSSSSNNNSNNNISINNNAAHPL 128

Query: 80  VEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKRVRGNGRGWWETPTEELGIEELQ 139
           VEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLK+VRGNGRGWWETPTEELGI+ELQ
Sbjct: 129 VEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKKVRGNGRGWWETPTEELGIDELQ 188

Query: 140 EVDASFGEIYSN 151
           EVDASFGEIYSN
Sbjct: 189 EVDASFGEIYSN 200

[Close]

BLAST of CsGy6G035540 vs. ExPASy TrEMBL
Match: A0A6J1EJ54 (agamous-like MADS-box protein AGL61 OS=Cucurbita moschata OX=3662 GN=LOC111433790 PE=4 SV=1)

HSP 1 Score: 205 bits (522), Expect = 4.98e-62
Identity = 123/212 (58.02%), Postives = 139/212 (65.57%), Query Frame = 0


Query: 20  GKPFSFAHPCIETIANKFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPL 79
           GKPFSFAHPCIE++ANKFL+ N     N                             HPL
Sbjct: 106 GKPFSFAHPCIESVANKFLDENPQPNDN----------------------------THPL 165

Query: 80  VEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKRVRGN-GRGWWETPTEELGIEEL 139
           VEAHRR+RINELNQQHNQLLSQLDAEKEKGKALEKLK+VRGN GRGWWE+PTEELGIEEL
Sbjct: 166 VEAHRRLRINELNQQHNQLLSQLDAEKEKGKALEKLKKVRGNNGRGWWESPTEELGIEEL 225

Query: 140 QEVDASFGEIYSNVCHQLKQRGVIGCCSYNNYNNNMNNSSMGFPLTNDQLG-EETIPFNI 199
           Q+VD S GE+Y NVCH+LK+RGV+G  SY+  N      ++GF    D  G EETIPFNI
Sbjct: 226 QQVDGSLGELYQNVCHELKERGVLGSSSYSASN------TLGF----DHAGREETIPFNI 279

Query: 200 LAGNVPPPLFPLPPPPPYLPPPPQFDFGEQQQ 229
           LA          P    YLP P  FD+G+QQQ
Sbjct: 286 LATGAAAAAAAGPSSATYLPDPNPFDYGQQQQ 279

[Close]

BLAST of CsGy6G035540 vs. ExPASy TrEMBL
Match: A0A6J1KP08 (agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111496989 PE=4 SV=1)

HSP 1 Score: 200 bits (509), Expect = 1.24e-60
Identity = 121/212 (57.08%), Postives = 137/212 (64.62%), Query Frame = 0


Query: 20  GKPFSFAHPCIETIANKFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPL 79
           GKPFSFAHPCIE++ANKFL+ N     N                             HPL
Sbjct: 63  GKPFSFAHPCIESVANKFLDENPQPNDN----------------------------THPL 122

Query: 80  VEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKRVRGN-GRGWWETPTEELGIEEL 139
           VEAHRR+RINELNQQHNQLLSQLDAEKEKGKALEKLK+VRGN GRGWWE+PTEEL IEEL
Sbjct: 123 VEAHRRLRINELNQQHNQLLSQLDAEKEKGKALEKLKKVRGNNGRGWWESPTEELAIEEL 182

Query: 140 QEVDASFGEIYSNVCHQLKQRGVIGCCSYNNYNNNMNNSSMGFPLTNDQLG-EETIPFNI 199
           Q+VD S GE+Y NVCH+LK+RGV+G  SY+  N      ++GF    D  G EETIPFNI
Sbjct: 183 QQVDGSLGELYQNVCHELKERGVLGSSSYSASN------TLGF----DHAGREETIPFNI 236

Query: 200 LAGNVPPPLFPLPPPPPYLPPPPQFDFGEQQQ 229
           LA          P    YLP P  FD+G+Q Q
Sbjct: 243 LATGAAAASAAGPSSATYLPDPNPFDYGQQPQ 236

[Close]

BLAST of CsGy6G035540 vs. ExPASy TrEMBL
Match: A0A6J1CYR8 (agamous-like MADS-box protein AGL61 OS=Momordica charantia OX=3673 GN=LOC111015822 PE=4 SV=1)

HSP 1 Score: 196 bits (498), Expect = 2.80e-59
Identity = 119/211 (56.40%), Postives = 138/211 (65.40%), Query Frame = 0


Query: 20  GKPFSFAHPCIETIANKFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPL 79
           GKPFSFAHP IE++ANKF+N       N                             HPL
Sbjct: 59  GKPFSFAHPSIESVANKFINETPQPNDN----------------------------THPL 118

Query: 80  VEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKRVRGN--GRGWWETPTEELGIEE 139
           VEAHRRVRINELNQQHNQLLSQL+AEKEKGKALEK+K+VRGN  GRGWWETPTEE+G+EE
Sbjct: 119 VEAHRRVRINELNQQHNQLLSQLEAEKEKGKALEKMKKVRGNSNGRGWWETPTEEMGMEE 178

Query: 140 LQEVDASFGEIYSNVCHQLKQRGVIGCCSYNNYNNNMNNSSMGFPLTNDQLGEETIPFNI 199
           LQ+VDAS G++Y+NVCHQL++RGVIG  S ++Y      SSM F    +  GEETIPFNI
Sbjct: 179 LQQVDASLGDLYTNVCHQLRERGVIGSSS-SSY------SSMPF----NGAGEETIPFNI 222

Query: 200 LAGNVPPPLFPLPPPPPYLPPPPQFDFGEQQ 228
           LA   PPP         YLP    FD+G+ Q
Sbjct: 239 LANGPPPPTNA------YLPH--AFDYGQDQ 222

[Close]

BLAST of CsGy6G035540 vs. TAIR 10
Match: AT3G04100.1 (AGAMOUS-like 57 )

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-06
Identity = 37/154 (24.03%), Postives = 72/154 (46.75%), Query Frame = 0


Query: 3   MWSLKVVLVDIDDPRSEGKPFSFAHPCIETIANKFLNGNKNNKGNNDDNNNNGDSSSSNN 62
           M  ++V  +    P+   KP++FAHP ++ +A++  N ++      DD            
Sbjct: 50  MCDVEVAFLIFSQPK---KPYTFAHPSMKKVADRLKNPSRQEPLERDD------------ 109

Query: 63  NNNNSNNNNNSNAAHPLVEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKRVRGNG 122
                          PLVEA+++ R+++L ++   L  +L  + EK K L++ +  +   
Sbjct: 110 -------------TRPLVEAYKKRRLHDLVKKMEALEEELAMDLEKLKLLKESRNEKKLD 169

Query: 123 RGWWETPTEELGIEELQEVDASFGEIYSNVCHQL 157
           + WW  P+E L  +ELQ+   +  E+  N+C  +
Sbjct: 170 KMWWNFPSEGLSAKELQQRYQAMLELRDNLCDNM 175

[Close]

BLAST of CsGy6G035540 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 44.7 bits (104), Expect = 1.3e-04
Identity = 48/187 (25.67%), Postives = 83/187 (44.39%), Query Frame = 0


Query: 21  KPFSFAHPCIETIANKFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPLV 80
           KPFSF HP +E++ ++++  ++NN          G  ++S                    
Sbjct: 114 KPFSFGHPSVESVLDRYV--SRNNMSLAQSQQLQGSPAAS-------------------- 173

Query: 81  EAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKR--VRGNGRGWWETPTEELGIEEL 140
                    ELN Q   +LS+++ EK+KG+A+E++++  VR +   WWE P EE+ + +L
Sbjct: 174 --------CELNMQLTHILSEVEEEKKKGQAMEEMRKESVRRSMINWWEKPVEEMNMVQL 233

Query: 141 QEVDASFGEIYSNVCHQLKQRGVIGCCSYNNYNNN----MNNSSMGFPLTNDQLGEETIP 200
           QE+  +  E+   V        V    S+N   ++    ++N     P  N   G   I 
Sbjct: 234 QEMKYALEELRKTV--------VTNMASFNEAKDDVFGFLDNKVTVPPYVNMPSGPSNI- 261

Query: 201 FNILAGN 202
           +N   GN
Sbjct: 294 YNFANGN 261

[Close]

BLAST of CsGy6G035540 vs. TAIR 10
Match: AT1G28460.1 (AGAMOUS-like 59 )

HSP 1 Score: 43.9 bits (102), Expect = 2.1e-04
Identity = 39/152 (25.66%), Postives = 71/152 (46.71%), Query Frame = 0


Query: 20  GKPFSFAHPCIETIANKFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPL 79
           GKP++F  P  + +A +FL               NGD+SSS++++              +
Sbjct: 58  GKPYTFGSPSFQAVAERFL---------------NGDASSSSSSS-------------LV 117

Query: 80  VEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKRVR-GNGRGWWET-PTEELGIEE 139
           + AH++ +I EL +++N+L+ +L  ++ K K    L   R  N   WW+  P +    E+
Sbjct: 118 MNAHKQAKIQELCKKYNRLVEELKVDEVKVKKAAALAETRVVNKDVWWKVDPNDVKDHEK 177

Query: 140 LQEVDASFGEIYSNVCHQLKQRGVIGCCSYNN 170
            +++   + E+Y  +C Q   R   G    NN
Sbjct: 178 AKKMMEKYQELYDKLCEQAASRIKRGHDENNN 181

[Close]

BLAST of CsGy6G035540 vs. TAIR 10
Match: AT1G29962.1 (AGAMOUS-like 64 )

HSP 1 Score: 42.7 bits (99), Expect = 4.8e-04
Identity = 35/152 (23.03%), Postives = 69/152 (45.39%), Query Frame = 0


Query: 20  GKPFSFAHPCIETIANKFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPL 79
           GKP++F  P  + +A +FLNG                          ++++++S+    +
Sbjct: 58  GKPYTFGSPSFQAVAERFLNG-------------------------EASSSSSSSLQRSV 117

Query: 80  VEAHRRVRINELNQQHNQLLSQLDAEKEKGKALEKLKRVRG-NGRGWWET-PTEELGIEE 139
           + AH++ +I EL + +N+L+ ++  E+ K K    L  +   N   WW+  P +    EE
Sbjct: 118 MNAHQQAKIQELCKVYNRLVEEITVEEVKLKKTAALAEMMPMNEDAWWKVDPNDVKDREE 177

Query: 140 LQEVDASFGEIYSNVCHQLKQRGVIGCCSYNN 170
           ++++     E+Y  +C +   R   G    NN
Sbjct: 178 VKKMMEKHQELYEKLCEEAASRIKRGHDENNN 184

The following BLAST results are available for this feature:

BLAST of CsGy6G035540 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G035540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658286.1	7.71e-149	100.00	agamous-like MADS-box protein AGL29 [Cucumis sativus]	[more]
XP_038881522.1	1.04e-86	72.97	agamous-like MADS-box protein AGL61 [Benincasa hispida]	[more]
KAA0052555.1	4.68e-65	88.64	agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa] >TYK13271.1 agamo...	[more]
XP_022926768.1	1.03e-61	58.02	agamous-like MADS-box protein AGL61 [Cucurbita moschata]	[more]
KAG6594479.1	8.52e-61	57.55	Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. soro...	[more]

BLAST of CsGy6G035540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNT7	3.73e-149	100.00	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G522745 PE...	[more]
A0A5A7UFR8	2.27e-65	88.64	Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1EJ54	4.98e-62	58.02	agamous-like MADS-box protein AGL61 OS=Cucurbita moschata OX=3662 GN=LOC11143379...	[more]
A0A6J1KP08	1.24e-60	57.08	agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111496989 ...	[more]
A0A6J1CYR8	2.80e-59	56.40	agamous-like MADS-box protein AGL61 OS=Momordica charantia OX=3673 GN=LOC1110158...	[more]

BLAST of CsGy6G035540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04100.1	1.3e-06	24.03	AGAMOUS-like 57	[more]
AT2G24840.1	1.3e-04	25.67	AGAMOUS-like 61	[more]
AT1G28460.1	2.1e-04	25.66	AGAMOUS-like 59	[more]
AT1G29962.1	4.8e-04	23.03	AGAMOUS-like 64	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 88..108
None	No IPR available	GENE3D	6.10.140.920		coord: 74..158 e-value: 1.7E-5 score: 26.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..241
None	No IPR available	PANTHER	PTHR11945:SF648	BOX PROTEIN, PUTATIVE-RELATED	coord: 18..172
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 18..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G035540.2	CsGy6G035540.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding