CsGy6G033650 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G033650
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	B-box type zinc finger family protein
Location	Gy14Chr6: 30230200 .. 30231098 (+)
RNA-Seq Expression	CsGy6G033650
Synteny	CsGy6G033650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGTTAAAAAAGAAAAGACAACCCAACTTGATGTCCTTACAGTTATCCCATCTGCACAATATTCTCTTCGTTAATGGCATCTTGTGTTATATAAATAAGTGAGTGATATGAGGAAACAAAAACTAAATTAAAAAAAAAAAAAAAGAAGAATGAAGAAGTTGTGCGAGCTGTGTGGGTGTGTGGCTACGGTGATGTGCGAATCAGACGCAGCCATGTTATGTTGGGGTTGCGATTCGAAGGTGCATGGGGCTAACTTTATAGTGGGGAAGCATTTGAGGGTTTTGCTGTGCCATGATTGTCAAGCCCCTACCCCTTGGAATGGTTCTGGCCCTAACCTTGTGGCTACGGTTGCCTTTTGCCACAATTGTGTTCACAAAAATAGGCGGAATAATGGGAGACGGTGTGAGAAAGCTTGTGGGAGCTCTGATGGCGGGGGAACTACTGCACCTAGTGGTTGCCATGACGATGACGATGACGATGAGATTGAAAATCAAGTGGTGCCTTGGTTATCTTTGTCCCCCAGCTAATTGAAAATTTTCTTCCCCTCTATGATTAATCCGTGCCCCATGCAATTTAATAATTATAGTTTGGAATCACTTTTTGGTTCTCTATAATAATGTACAATGTAAATTTATCCTTTAAATTATGGGTAGGTACTCTAGGAATTTCATTTTTTTATAAGTATACCATTCAACAAATGTAATGGGGAAATTTTGAACTTTACACCTCAATTATATCTGTTCTCGCCCAACCAGAAAATTGTGTAAATGTGTTTCATTGTGTGATGATTAAAATTTGTACCTTATCTAATTAAATGTACTTGTGTACGTATAGTCACAATCATAAAGTATATAATTACACTTATGAAAGATGGATAGATATGGTATAAAAGTGTTGC

mRNA sequence

AGAGTTAAAAAAGAAAAGACAACCCAACTTGATGTCCTTACAGTTATCCCATCTGCACAATATTCTCTTCGTTAATGGCATCTTGTGTTATATAAATAAGTGAGTGATATGAGGAAACAAAAACTAAATTAAAAAAAAAAAAAAAGAAGAATGAAGAAGTTGTGCGAGCTGTGTGGGTGTGTGGCTACGGTGATGTGCGAATCAGACGCAGCCATGTTATGTTGGGGTTGCGATTCGAAGGTGCATGGGGCTAACTTTATAGTGGGGAAGCATTTGAGGGTTTTGCTGTGCCATGATTGTCAAGCCCCTACCCCTTGGAATGGTTCTGGCCCTAACCTTGTGGCTACGGTTGCCTTTTGCCACAATTGTGTTCACAAAAATAGGCGGAATAATGGGAGACGGTGTGAGAAAGCTTGTGGGAGCTCTGATGGCGGGGGAACTACTGCACCTAGTGGTTGCCATGACGATGACGATGACGATGAGATTGAAAATCAAGTGGTGCCTTGGTTATCTTTGTCCCCCAGCTAATTGAAAATTTTCTTCCCCTCTATGATTAATCCGTGCCCCATGCAATTTAATAATTATAGTTTGGAATCACTTTTTGGTTCTCTATAATAATGTACAATGTAAATTTATCCTTTAAATTATGGGTAGGTACTCTAGGAATTTCATTTTTTTATAAGTATACCATTCAACAAATGTAATGGGGAAATTTTGAACTTTACACCTCAATTATATCTGTTCTCGCCCAACCAGAAAATTGTGTAAATGTGTTTCATTGTGTGATGATTAAAATTTGTACCTTATCTAATTAAATGTACTTGTGTACGTATAGTCACAATCATAAAGTATATAATTACACTTATGAAAGATGGATAGATATGGTATAAAAGTGTTGC

Coding sequence (CDS)

ATGAAGAAGTTGTGCGAGCTGTGTGGGTGTGTGGCTACGGTGATGTGCGAATCAGACGCAGCCATGTTATGTTGGGGTTGCGATTCGAAGGTGCATGGGGCTAACTTTATAGTGGGGAAGCATTTGAGGGTTTTGCTGTGCCATGATTGTCAAGCCCCTACCCCTTGGAATGGTTCTGGCCCTAACCTTGTGGCTACGGTTGCCTTTTGCCACAATTGTGTTCACAAAAATAGGCGGAATAATGGGAGACGGTGTGAGAAAGCTTGTGGGAGCTCTGATGGCGGGGGAACTACTGCACCTAGTGGTTGCCATGACGATGACGATGACGATGAGATTGAAAATCAAGTGGTGCCTTGGTTATCTTTGTCCCCCAGCTAA

Protein sequence

MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAPSGCHDDDDDDEIENQVVPWLSLSPS*

Homology

[Close]

BLAST of CsGy6G033650 vs. ExPASy Swiss-Prot
Match: Q9LJB7 (B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.9e-09
Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 1  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSG 60
          M   CELCG  A + C +D+A LC  CD+K H +NF+  +H R ++C +C++ T    SG
Sbjct: 1  MVSFCELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSG 60

Query: 61 PNL 64
          P L
Sbjct: 61 PLL 63

[Close]

BLAST of CsGy6G033650 vs. ExPASy Swiss-Prot
Match: Q1G3I2 (B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.3e-09
Identity = 28/50 (56.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 5  CELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPT 55
          CELCG  ATV CE+DAA LC  CD  VH ANF+  +HLR ++C  C+  T
Sbjct: 32 CELCGENATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTCRKLT 81

[Close]

BLAST of CsGy6G033650 vs. ExPASy Swiss-Prot
Match: Q9LRM4 (B-box domain protein 31 OS=Arabidopsis thaliana OX=3702 GN=MIP1B PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 7.3e-09
Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 5  CELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPT 55
          CELC   A+V CE+D+A LC  CD  VHGANF+  +H+R +LC  CQ  T
Sbjct: 31 CELCDGDASVFCEADSAFLCRKCDRWVHGANFLAWRHVRRVLCTSCQKLT 80

[Close]

BLAST of CsGy6G033650 vs. ExPASy Swiss-Prot
Match: Q9C9F4 (Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana OX=3702 GN=At1g68190 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.6e-08
Identity = 41/125 (32.80%), Postives = 55/125 (44.00%), Query Frame = 0


Query: 1   MKKLCELCGCV-ATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGS 60
           M+++CE C    A V C +D A LC  CD+KVH AN + G+HLR +LC  C+       +
Sbjct: 10  MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCK-------N 69

Query: 61  GPNLVA----TVAFCHNCVHK-------NRRNNGRRCEKACGSSDGGGTTAPSGCHDDDD 114
            P +V      +  CH C  K         R    RC   C  +            DDDD
Sbjct: 70  QPCVVRCFDHKMFLCHGCNDKFHGGGSSEHRRRDLRCYTGCPPAKDFAVMWGFRVMDDDD 127

[Close]

BLAST of CsGy6G033650 vs. ExPASy Swiss-Prot
Match: Q96502 (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07
Identity = 37/125 (29.60%), Postives = 59/125 (47.20%), Query Frame = 0


Query: 3   KLCELCGCVA-TVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGP 62
           + C+ C   A TV CE+D+A LC  CD++VH AN +  +H RV +C  C++         
Sbjct: 14  RACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKA 73

Query: 63  NLVATVAFCHNCVHKNR--RNNGRRCEKACGSSDGGGTTAPSGCHDDDDDDEIENQVVPW 122
           +  +    C   +H         +R      S++   + APS    D D+DE + +V  W
Sbjct: 74  DAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSMAPS--ETDADNDEDDREVASW 133

Query: 123 LSLSP 125
           L  +P
Sbjct: 134 LLPNP 136

[Close]

BLAST of CsGy6G033650 vs. NCBI nr
Match: TYK13089.1 (putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 251 bits (640), Expect = 7.13e-84
Identity = 117/128 (91.41%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 1   MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSG 60
           MKKLCELCGCVATVMCE+DAAMLCWGCDSKVHGANF+VGKHLRVLLCHDCQAPTPWNGSG
Sbjct: 1   MKKLCELCGCVATVMCEADAAMLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSG 60

Query: 61  PNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAPSGCHDDDDDD---EIENQVV 120
           PNLVATVAFCHNCVHK R NNGRRCEKACGSS+GG  TAPSGC DDDDDD   EIENQVV
Sbjct: 61  PNLVATVAFCHNCVHKKRLNNGRRCEKACGSSNGG--TAPSGCDDDDDDDDDDEIENQVV 120

Query: 121 PWLSLSPS 125
           PWLSLSPS
Sbjct: 121 PWLSLSPS 126

[Close]

BLAST of CsGy6G033650 vs. NCBI nr
Match: XP_008441086.2 (PREDICTED: putative zinc finger protein At1g68190 [Cucumis melo] >KAA0052734.1 putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 248 bits (633), Expect = 8.62e-83
Identity = 116/129 (89.92%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSG 60
           MKKLCELCGCVATVMCE+DAAMLCWGCDSKVHGANF+VGKHLRVLLCHDCQAPTPWNGSG
Sbjct: 1   MKKLCELCGCVATVMCEADAAMLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSG 60

Query: 61  PNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAPSGCHDDDDDD----EIENQV 120
           PNLVATVAFCHNCVHK R NNGRRCEKACGSS+GG  TAP GC DDDDDD    EIENQV
Sbjct: 61  PNLVATVAFCHNCVHKKRLNNGRRCEKACGSSNGG--TAPIGCDDDDDDDDDDDEIENQV 120

Query: 121 VPWLSLSPS 125
           VPWLSLSPS
Sbjct: 121 VPWLSLSPS 127

[Close]

BLAST of CsGy6G033650 vs. NCBI nr
Match: XP_011658518.1 (zinc finger protein CONSTANS-LIKE 2 [Cucumis sativus])

HSP 1 Score: 225 bits (574), Expect = 3.81e-74
Identity = 102/104 (98.08%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 22  MLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNN 81
           MLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNN
Sbjct: 1   MLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNN 60

Query: 82  GRRCEKACGSSDGGGTTAPSGCHDDDDDDEIENQVVPWLSLSPS 125
           GRRCEKACGSSDGGGTTAPSGC  DDDDDEIENQVVPWLSLSPS
Sbjct: 61  GRRCEKACGSSDGGGTTAPSGC--DDDDDEIENQVVPWLSLSPS 102

[Close]

BLAST of CsGy6G033650 vs. NCBI nr
Match: KAE8647679.1 (hypothetical protein Csa_003671 [Cucumis sativus])

HSP 1 Score: 202 bits (515), Expect = 2.96e-65
Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 31  VHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACG 90
           VHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACG
Sbjct: 2   VHGANFIVGKHLRVLLCHDCQAPTPWNGSGPNLVATVAFCHNCVHKNRRNNGRRCEKACG 61

Query: 91  SSDGGGTTAPSGCHDDDDDDEIENQVVPWLSLSPS 125
           SSDGGGTTAPSGC  DDDDDEIENQVVPWLSLSPS
Sbjct: 62  SSDGGGTTAPSGC--DDDDDEIENQVVPWLSLSPS 94

[Close]

BLAST of CsGy6G033650 vs. NCBI nr
Match: XP_022950367.1 (putative zinc finger protein At1g68190 [Cucurbita moschata])

HSP 1 Score: 192 bits (488), Expect = 1.18e-60
Identity = 92/126 (73.02%), Postives = 98/126 (77.78%), Query Frame = 0


Query: 1   MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSG 60
           MKKLCELC CVATV+CESD A LCWGCDSKVHGANF+VGKHLRVLLCHDCQAPTPWNGSG
Sbjct: 1   MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSG 60

Query: 61  PNLVATVAFCHNCVHKNRRNNG---RRCEKACGSSDGGGTTAPSGCHDDDDDDEIENQVV 120
           P LVATVAFC NCV KNRRN     RR  +  G  +G G++        D DDE ENQVV
Sbjct: 61  PKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVV 120

Query: 121 PWLSLS 123
           PWLSLS
Sbjct: 121 PWLSLS 126

[Close]

BLAST of CsGy6G033650 vs. ExPASy TrEMBL
Match: A0A0A0KHH6 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G516780 PE=4 SV=1)

HSP 1 Score: 267 bits (683), Expect = 8.60e-91
Identity = 123/125 (98.40%), Postives = 123/125 (98.40%), Query Frame = 0


Query: 1   MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSG 60
           MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSG
Sbjct: 1   MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSG 60

Query: 61  PNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAPSGCHDDDDDDEIENQVVPWL 120
           PNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAPSGC  DDDDDEIENQVVPWL
Sbjct: 61  PNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAPSGC--DDDDDEIENQVVPWL 120

Query: 121 SLSPS 125
           SLSPS
Sbjct: 121 SLSPS 123

[Close]

BLAST of CsGy6G033650 vs. ExPASy TrEMBL
Match: A0A5D3CS61 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006970 PE=4 SV=1)

HSP 1 Score: 251 bits (640), Expect = 3.45e-84
Identity = 117/128 (91.41%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 1   MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSG 60
           MKKLCELCGCVATVMCE+DAAMLCWGCDSKVHGANF+VGKHLRVLLCHDCQAPTPWNGSG
Sbjct: 1   MKKLCELCGCVATVMCEADAAMLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSG 60

Query: 61  PNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAPSGCHDDDDDD---EIENQVV 120
           PNLVATVAFCHNCVHK R NNGRRCEKACGSS+GG  TAPSGC DDDDDD   EIENQVV
Sbjct: 61  PNLVATVAFCHNCVHKKRLNNGRRCEKACGSSNGG--TAPSGCDDDDDDDDDDEIENQVV 120

Query: 121 PWLSLSPS 125
           PWLSLSPS
Sbjct: 121 PWLSLSPS 126

[Close]

BLAST of CsGy6G033650 vs. ExPASy TrEMBL
Match: A0A5A7UBH5 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003480 PE=4 SV=1)

HSP 1 Score: 248 bits (633), Expect = 4.17e-83
Identity = 116/129 (89.92%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSG 60
           MKKLCELCGCVATVMCE+DAAMLCWGCDSKVHGANF+VGKHLRVLLCHDCQAPTPWNGSG
Sbjct: 1   MKKLCELCGCVATVMCEADAAMLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSG 60

Query: 61  PNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAPSGCHDDDDDD----EIENQV 120
           PNLVATVAFCHNCVHK R NNGRRCEKACGSS+GG  TAP GC DDDDDD    EIENQV
Sbjct: 61  PNLVATVAFCHNCVHKKRLNNGRRCEKACGSSNGG--TAPIGCDDDDDDDDDDDEIENQV 120

Query: 121 VPWLSLSPS 125
           VPWLSLSPS
Sbjct: 121 VPWLSLSPS 127

[Close]

BLAST of CsGy6G033650 vs. ExPASy TrEMBL
Match: A0A1S3B3D3 (putative zinc finger protein At1g68190 OS=Cucumis melo OX=3656 GN=LOC103485314 PE=4 SV=1)

HSP 1 Score: 248 bits (633), Expect = 4.17e-83
Identity = 116/129 (89.92%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSG 60
           MKKLCELCGCVATVMCE+DAAMLCWGCDSKVHGANF+VGKHLRVLLCHDCQAPTPWNGSG
Sbjct: 1   MKKLCELCGCVATVMCEADAAMLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSG 60

Query: 61  PNLVATVAFCHNCVHKNRRNNGRRCEKACGSSDGGGTTAPSGCHDDDDDD----EIENQV 120
           PNLVATVAFCHNCVHK R NNGRRCEKACGSS+GG  TAP GC DDDDDD    EIENQV
Sbjct: 61  PNLVATVAFCHNCVHKKRLNNGRRCEKACGSSNGG--TAPIGCDDDDDDDDDDDEIENQV 120

Query: 121 VPWLSLSPS 125
           VPWLSLSPS
Sbjct: 121 VPWLSLSPS 127

[Close]

BLAST of CsGy6G033650 vs. ExPASy TrEMBL
Match: A0A6J1GEL4 (putative zinc finger protein At1g68190 OS=Cucurbita moschata OX=3662 GN=LOC111453480 PE=4 SV=1)

HSP 1 Score: 192 bits (488), Expect = 5.73e-61
Identity = 92/126 (73.02%), Postives = 98/126 (77.78%), Query Frame = 0


Query: 1   MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSG 60
           MKKLCELC CVATV+CESD A LCWGCDSKVHGANF+VGKHLRVLLCHDCQAPTPWNGSG
Sbjct: 1   MKKLCELCDCVATVICESDQARLCWGCDSKVHGANFLVGKHLRVLLCHDCQAPTPWNGSG 60

Query: 61  PNLVATVAFCHNCVHKNRRNNG---RRCEKACGSSDGGGTTAPSGCHDDDDDDEIENQVV 120
           P LVATVAFC NCV KNRRN     RR  +  G  +G G++        D DDE ENQVV
Sbjct: 61  PKLVATVAFCQNCVEKNRRNGKTAQRRGRRRVGEEEGRGSSNGGSGGGSDSDDEKENQVV 120

Query: 121 PWLSLS 123
           PWLSLS
Sbjct: 121 PWLSLS 126

[Close]

BLAST of CsGy6G033650 vs. TAIR 10
Match: AT5G54470.1 (B-box type zinc finger family protein )

HSP 1 Score: 119.4 bits (298), Expect = 2.1e-27
Identity = 59/126 (46.83%), Postives = 78/126 (61.90%), Query Frame = 0


Query: 2   KKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSGP 61
           KK CELC  VA + CESD A LCW CD KVHGANF+V KH+R LLC  CQ+ TPW  SG 
Sbjct: 3   KKKCELCCGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPWKASGL 62

Query: 62  NLVATVAFCHNCVHKNRRNNG---------RRCEKACGSSDGGGTTAPSGCHDDDDDDEI 119
           NL  TV+ C +C+ + + NN           + E+  G +D G  +      +D++++E+
Sbjct: 63  NLGPTVSICESCLARKKNNNSSLAGRDQNLNQEEEIIGCND-GAESYDEESDEDEEEEEV 122

[Close]

BLAST of CsGy6G033650 vs. TAIR 10
Match: AT4G27310.1 (B-box type zinc finger family protein )

HSP 1 Score: 102.8 bits (255), Expect = 2.0e-22
Identity = 63/158 (39.87%), Postives = 75/158 (47.47%), Query Frame = 0


Query: 1   MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSG 60
           M K C+LC  VA + CESD A LCW CD KVHGANF+V KH R LLC  CQ+ TPW  +G
Sbjct: 1   MGKKCDLCNGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLTPWKATG 60

Query: 61  PNLVATVAFCHNCVHKNRRNNGR--------RCEKACGSSD----------GGGTTAPSG 120
             L  T + C +CV       GR        R ++   S +          G G  A S 
Sbjct: 61  LRLGPTFSVCESCVALKNAGGGRGNRVLSENRGQEEVNSFESEEDRIREDHGDGDDAES- 120

[Close]

BLAST of CsGy6G033650 vs. TAIR 10
Match: AT3G21150.1 (B-box 32 )

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-10
Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 1  MKKLCELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPTPWNGSG 60
          M   CELCG  A + C +D+A LC  CD+K H +NF+  +H R ++C +C++ T    SG
Sbjct: 1  MVSFCELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSG 60

Query: 61 PNL 64
          P L
Sbjct: 61 PLL 63

[Close]

BLAST of CsGy6G033650 vs. TAIR 10
Match: AT4G15248.1 (B-box type zinc finger family protein )

HSP 1 Score: 62.4 bits (150), Expect = 3.0e-10
Identity = 28/50 (56.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 5  CELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPT 55
          CELCG  ATV CE+DAA LC  CD  VH ANF+  +HLR ++C  C+  T
Sbjct: 32 CELCGENATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTCRKLT 81

[Close]

BLAST of CsGy6G033650 vs. TAIR 10
Match: AT3G21890.1 (B-box type zinc finger family protein )

HSP 1 Score: 61.6 bits (148), Expect = 5.2e-10
Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 0


Query: 5  CELCGCVATVMCESDAAMLCWGCDSKVHGANFIVGKHLRVLLCHDCQAPT 55
          CELC   A+V CE+D+A LC  CD  VHGANF+  +H+R +LC  CQ  T
Sbjct: 31 CELCDGDASVFCEADSAFLCRKCDRWVHGANFLAWRHVRRVLCTSCQKLT 80

The following BLAST results are available for this feature:

BLAST of CsGy6G033650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LJB7	1.9e-09	42.86	B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1	[more]
Q1G3I2	4.3e-09	56.00	B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1	[more]
Q9LRM4	7.3e-09	54.00	B-box domain protein 31 OS=Arabidopsis thaliana OX=3702 GN=MIP1B PE=2 SV=1	[more]
Q9C9F4	3.6e-08	32.80	Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana OX=3702 GN=At1g68...	[more]
Q96502	1.4e-07	29.60	Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1...	[more]

BLAST of CsGy6G033650 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK13089.1	7.13e-84	91.41	putative zinc finger protein [Cucumis melo var. makuwa]	[more]
XP_008441086.2	8.62e-83	89.92	PREDICTED: putative zinc finger protein At1g68190 [Cucumis melo] >KAA0052734.1 p...	[more]
XP_011658518.1	3.81e-74	98.08	zinc finger protein CONSTANS-LIKE 2 [Cucumis sativus]	[more]
KAE8647679.1	2.96e-65	97.89	hypothetical protein Csa_003671 [Cucumis sativus]	[more]
XP_022950367.1	1.18e-60	73.02	putative zinc finger protein At1g68190 [Cucurbita moschata]	[more]

BLAST of CsGy6G033650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHH6	8.60e-91	98.40	B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G516780 ...	[more]
A0A5D3CS61	3.45e-84	91.41	Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7UBH5	4.17e-83	89.92	Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A1S3B3D3	4.17e-83	89.92	putative zinc finger protein At1g68190 OS=Cucumis melo OX=3656 GN=LOC103485314 P...	[more]
A0A6J1GEL4	5.73e-61	73.02	putative zinc finger protein At1g68190 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of CsGy6G033650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54470.1	2.1e-27	46.83	B-box type zinc finger family protein	[more]
AT4G27310.1	2.0e-22	39.87	B-box type zinc finger family protein	[more]
AT3G21150.1	1.4e-10	42.86	B-box 32	[more]
AT4G15248.1	3.0e-10	56.00	B-box type zinc finger family protein	[more]
AT3G21890.1	5.2e-10	54.00	B-box type zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 1..46 e-value: 1.1E-4 score: 31.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..110
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 1..122
None	No IPR available	PANTHER	PTHR31717:SF95	B-BOX TYPE ZINC FINGER PROTEIN	coord: 1..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G033650.2	CsGy6G033650.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding