CsGy6G033100 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G033100
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Autophagy-related protein
Location	Gy14Chr6: 29982465 .. 29984352 (-)
RNA-Seq Expression	CsGy6G033100
Synteny	CsGy6G033100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGAATGTTCTCCAACGAGAGAGAACAGAATCGGTAGCCTTCGACGTGTTTGAAGTGGAAAGAGGTTGGTTCATCTACGAAACACACGAGTCATGATCAACTCTTCTCTGTTTTTAAATTTTCTTTTCGTATTATCCAATTCTTCTCACTCCCTTCTTGCCGATTCATCACTCAAATACTGAATTTCCCAACCCCCTTTTTGATCTTCTCTCTGGTCGAGTATACCATTACCAACCCACCTTCGCCTTTCTTTGCTTTTTCACTTTTGATTATACTTTTCCTATATACCCAATAGTCAATTCTTTCTGGGGTTCTAACGTTTCGCTTTCTTGAAAATTTTCAGCCACCAATCAATTGTAGCGTGAAATTTTCTAATTTCTTCCATGGCCAGAAGTTCGTTAAAACTCGGAATTCCTTTGGGTAATCATCTACTTTTAGTTTCACATGAATTGCTTAGAATTTGATTGGTTTTGTGACCTTATTTGTATTCGTGTTCTGTTTGTCCCTCTTTTGGGTAATTCTGCTTTGGTAAAATCTAACAGGCTACAATCAGAATTATGTGATATTTAATGCTTTAATTGTTATCGCTTACTCTGTTGGGATATTCACTTCTCAGAAAAGAGGCTGGCTGAAGCTGCTCGTATAAGGGAGAAGTATCCGGATAGAATACCTGTATGAATAATGTTATTGTTTTAGTTCTTCACTTCGTATGGTGTTCAAAATTTATTTTGGTTTTGGTGCTGATGCAATTAAGTTAATCAGGTGATTGTCGAGAAAGCTGGGAGGAGTGACATTGCTGATATTGATAGGAACAAGTACCTCTCTCTTTCTCATTTCTCTTCGTGAATTGGTGAATTAGCATAAATTGATGATGAGATGTTACCGCATTCTTAACTGATAAATTAAAGTAGAAACCAGCATATATGTTAGTAGCAGCTGCAGTAATATGTCAGAATGAAAATAATGGAGTCGATAGCATGTTGTTTGAATGTTCAGTTCACTGAAAACAGACGTACCATGATCAATCATATGAATCATGGCTGACTTGAAAGATTTCAATGGCTTTCAGATTGTAACTCCGTTGGATTGACTATTGACTGATACATGGAATGAAATCAATAGAGCTAGTCCCAACAAAGCCAAAAAAAAACCCATATTTAAATGTCATGTTACAGCAGTAAATCAAGTCCCGTGATTGATACTGTATAATTCTGCATAAATCTTAAACGCAAAGAAGTATTGTGTTGTTATAAGCACATGGATGATCCATTTTGAAAGTTGCCAATATCGTATACTTGAACAGTTTTCATTAAGTGTGGTGTGGCATTTTTGTATCTTTCCCATTGCAGATACCTCGTCCCCAAGGATTTAACTGTTGGACAGTTTGTTTACGTTGTTCGGAAACGGATTAAGCTTAGTGCTGAGAAAGCTATATTTGTGTTTGTGAAGGACACTCTACCATCAACTGGTGAGTAAAGATGACCCCTTTTATCTTAATCTCTGATCTTGTATTGAATGTAAGCTTTAAAATAAATTCTTCTGTGCAACAGGTGCATTGATGTCTGCAATTTATGCGGATAATAAAGACGAAGATGGTTTTCTTTACATGTCATACAGTGGAGAAAACACTTTTGGTGGGTTCCTTGGAGGACAATGACACATTTGCCTGTAAATTCTAGTTATGCTCTTCCAGATCAATCAATGCATCAACTTTATATTTCATTCTATTTTAGTATATTTAACTTTCCATCATAGGTTGTGCTCAAGGAGTGGCCTTGAAAGTTTTCGTTTTTTTTCTCCTTCTTTCAATTGAGCTGTGAACTAATGAAATAGCTATTCGATCTTTTTAGTTGTTTATATCAAGCAGTGAAATGATTAAAATTTCTG

mRNA sequence

GGGGAATGTTCTCCAACGAGAGAGAACAGAATCGGTAGCCTTCGACGTGTTTGAAGTGGAAAGAGCCACCAATCAATTGTAGCGTGAAATTTTCTAATTTCTTCCATGGCCAGAAGTTCGTTAAAACTCGGAATTCCTTTGGAAAAGAGGCTGGCTGAAGCTGCTCGTATAAGGGAGAAGTATCCGGATAGAATACCTGTGATTGTCGAGAAAGCTGGGAGGAGTGACATTGCTGATATTGATAGGAACAAATACCTCGTCCCCAAGGATTTAACTGTTGGACAGTTTGTTTACGTTGTTCGGAAACGGATTAAGCTTAGTGCTGAGAAAGCTATATTTGTGTTTGTGAAGGACACTCTACCATCAACTGGTGCATTGATGTCTGCAATTTATGCGGATAATAAAGACGAAGATGGTTTTCTTTACATGTCATACAGTGGAGAAAACACTTTTGGTGGGTTCCTTGGAGGACAATGACACATTTGCCTGTAAATTCTAGTTATGCTCTTCCAGATCAATCAATGCATCAACTTTATATTTCATTCTATTTTAGTATATTTAACTTTCCATCATAGGTTGTGCTCAAGGAGTGGCCTTGAAAGTTTTCGTTTTTTTTCTCCTTCTTTCAATTGAGCTGTGAACTAATGAAATAGCTATTCGATCTTTTTAGTTGTTTATATCAAGCAGTGAAATGATTAAAATTTCTG

Coding sequence (CDS)

ATGGCCAGAAGTTCGTTAAAACTCGGAATTCCTTTGGAAAAGAGGCTGGCTGAAGCTGCTCGTATAAGGGAGAAGTATCCGGATAGAATACCTGTGATTGTCGAGAAAGCTGGGAGGAGTGACATTGCTGATATTGATAGGAACAAATACCTCGTCCCCAAGGATTTAACTGTTGGACAGTTTGTTTACGTTGTTCGGAAACGGATTAAGCTTAGTGCTGAGAAAGCTATATTTGTGTTTGTGAAGGACACTCTACCATCAACTGGTGCATTGATGTCTGCAATTTATGCGGATAATAAAGACGAAGATGGTTTTCTTTACATGTCATACAGTGGAGAAAACACTTTTGGTGGGTTCCTTGGAGGACAATGA

Protein sequence

MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQFVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFLGGQ*

Homology

[Close]

BLAST of CsGy6G033100 vs. ExPASy Swiss-Prot
Match: A2YS06 (Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=3 SV=2)

HSP 1 Score: 193.7 bits (491), Expect = 1.2e-48
Identity = 100/120 (83.33%), Postives = 107/120 (89.17%), Query Frame = 0


Query: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60
           MARSS KL  PLE+R AEA RIREKYPDRIPVIVEKA RSDI DID+ KYLVP DLTVGQ
Sbjct: 1   MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIF+FVK+TLP T ALMSAIY +NKDEDGFLYM+YSGENTFG F+
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGLFV 120

[Close]

BLAST of CsGy6G033100 vs. ExPASy Swiss-Prot
Match: Q6Z1D5 (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8C PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.2e-48
Identity = 100/120 (83.33%), Postives = 107/120 (89.17%), Query Frame = 0


Query: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60
           MARSS KL  PLE+R AEA RIREKYPDRIPVIVEKA RSDI DID+ KYLVP DLTVGQ
Sbjct: 1   MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIF+FVK+TLP T ALMSAIY +NKDEDGFLYM+YSGENTFG F+
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGLFV 120

[Close]

BLAST of CsGy6G033100 vs. ExPASy Swiss-Prot
Match: M1C146 (Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.0e-47
Identity = 97/119 (81.51%), Postives = 106/119 (89.08%), Query Frame = 0


Query: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60
           MA+SS KL  PLE+R AEAARIREKYPDRIPVIVEKA RSDI DID+ KYLVP DLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGF 120
           FVYVVRKRIKLSAEKAIF+FVK+ LP T A+MSAIY ++KDEDGFLYM+YSGENTFG F
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEEHKDEDGFLYMTYSGENTFGSF 119

[Close]

BLAST of CsGy6G033100 vs. ExPASy Swiss-Prot
Match: Q8LEM4 (Autophagy-related protein 8a OS=Arabidopsis thaliana OX=3702 GN=ATG8A PE=1 SV=2)

HSP 1 Score: 188.7 bits (478), Expect = 3.9e-47
Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0


Query: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60
           MA+SS K+  PLE R++E++RIREKYPDRIPVIVEKAG+SD+ DID+ KYLVP DLTVGQ
Sbjct: 1   MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKL AEKAIFVFVK+TLP T ALMSAIY ++KDEDGFLYM+YSGENTFG
Sbjct: 61  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of CsGy6G033100 vs. ExPASy Swiss-Prot
Match: Q9XEB5 (Autophagy-related protein 8b OS=Arabidopsis thaliana OX=3702 GN=ATG8B PE=1 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 7.3e-46
Identity = 90/118 (76.27%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60
           M ++S KL  PLE R+AE+ RIR KYP+R+PVIVEKAG+SD+ DID+ KYLVP DLT+GQ
Sbjct: 1   MEKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGG 119
           FVYVVRKRIKL AEKAIFVFVK+TLP T ALMSAIY ++KDEDGFLYM+YSGENTFGG
Sbjct: 61  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGG 118

[Close]

BLAST of CsGy6G033100 vs. NCBI nr
Match: XP_004134765.1 (autophagy-related protein 8C [Cucumis sativus] >XP_011658146.1 autophagy-related protein 8C [Cucumis sativus] >XP_011658147.1 autophagy-related protein 8C [Cucumis sativus] >KGN49109.1 hypothetical protein Csa_003738 [Cucumis sativus])

HSP 1 Score: 240 bits (613), Expect = 7.82e-80
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60
           MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ
Sbjct: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 123
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CsGy6G033100 vs. NCBI nr
Match: XP_008439996.1 (PREDICTED: autophagy-related protein 8C [Cucumis melo] >XP_008439997.1 PREDICTED: autophagy-related protein 8C [Cucumis melo] >XP_016899344.1 PREDICTED: autophagy-related protein 8C [Cucumis melo] >TYK13044.1 autophagy-related protein 8C [Cucumis melo var. makuwa])

HSP 1 Score: 234 bits (597), Expect = 2.16e-77
Identity = 120/123 (97.56%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60
           MARSS KLGIPLEKR AEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVP DLTVGQ
Sbjct: 1   MARSSFKLGIPLEKRQAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPTDLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 123
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CsGy6G033100 vs. NCBI nr
Match: KAG6603779.1 (Autophagy-related protein 8C, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033949.1 Autophagy-related protein 8C [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 223 bits (568), Expect = 5.71e-73
Identity = 113/123 (91.87%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60
           MARSS KLGIPLEKR AEAAR+REKYPDRIPVIVEKAGRS+I DIDRNKYLVP DLTVGQ
Sbjct: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIDRNKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAE+AIFVFVKDTLPSTGALMS IY  NKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSVIYEHNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 123
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CsGy6G033100 vs. NCBI nr
Match: XP_022950063.1 (autophagy-related protein 8C-like [Cucurbita moschata])

HSP 1 Score: 222 bits (565), Expect = 1.64e-72
Identity = 112/123 (91.06%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60
           MARSS KLGIPLE+R AEAAR+REKYPDRIPVIVEKAGRS+I DIDRNKYLVP DLTVGQ
Sbjct: 1   MARSSFKLGIPLERRRAEAARVREKYPDRIPVIVEKAGRSNIVDIDRNKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAE+AIFVFVKDTLPSTGALMS IY  NKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSVIYEHNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 123
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CsGy6G033100 vs. NCBI nr
Match: XP_022142105.1 (autophagy-related protein 8C-like [Momordica charantia] >XP_022142106.1 autophagy-related protein 8C-like [Momordica charantia])

HSP 1 Score: 218 bits (555), Expect = 9.92e-71
Identity = 113/123 (91.87%), Postives = 118/123 (95.93%), Query Frame = 0


Query: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60
           MARSS KLGIPLE+R AEAARIREKYP+RIPVIVEKAGRS+IADID+NKYLVP DLTVGQ
Sbjct: 1   MARSSFKLGIPLERRQAEAARIREKYPNRIPVIVEKAGRSNIADIDKNKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIY +NKDEDGFLYMSYSGENTFG FL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG-FL 120

Query: 121 GGQ 123
           GGQ
Sbjct: 121 GGQ 122

[Close]

BLAST of CsGy6G033100 vs. ExPASy TrEMBL
Match: A0A0A0KJW7 (Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_6G513730 PE=3 SV=1)

HSP 1 Score: 240 bits (613), Expect = 3.78e-80
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60
           MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ
Sbjct: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 123
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CsGy6G033100 vs. ExPASy TrEMBL
Match: A0A1S3B043 (Autophagy-related protein OS=Cucumis melo OX=3656 GN=LOC103484614 PE=3 SV=1)

HSP 1 Score: 234 bits (597), Expect = 1.04e-77
Identity = 120/123 (97.56%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60
           MARSS KLGIPLEKR AEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVP DLTVGQ
Sbjct: 1   MARSSFKLGIPLEKRQAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPTDLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 123
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CsGy6G033100 vs. ExPASy TrEMBL
Match: A0A5D3CPT6 (Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006460 PE=3 SV=1)

HSP 1 Score: 234 bits (597), Expect = 1.04e-77
Identity = 120/123 (97.56%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60
           MARSS KLGIPLEKR AEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVP DLTVGQ
Sbjct: 1   MARSSFKLGIPLEKRQAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPTDLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 123
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CsGy6G033100 vs. ExPASy TrEMBL
Match: A0A6J1GDU9 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111453258 PE=3 SV=1)

HSP 1 Score: 222 bits (565), Expect = 7.93e-73
Identity = 112/123 (91.06%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60
           MARSS KLGIPLE+R AEAAR+REKYPDRIPVIVEKAGRS+I DIDRNKYLVP DLTVGQ
Sbjct: 1   MARSSFKLGIPLERRRAEAARVREKYPDRIPVIVEKAGRSNIVDIDRNKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAE+AIFVFVKDTLPSTGALMS IY  NKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSVIYEHNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 123
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CsGy6G033100 vs. ExPASy TrEMBL
Match: A0A6J1CL79 (Autophagy-related protein OS=Momordica charantia OX=3673 GN=LOC111012314 PE=3 SV=1)

HSP 1 Score: 218 bits (555), Expect = 4.80e-71
Identity = 113/123 (91.87%), Postives = 118/123 (95.93%), Query Frame = 0


Query: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60
           MARSS KLGIPLE+R AEAARIREKYP+RIPVIVEKAGRS+IADID+NKYLVP DLTVGQ
Sbjct: 1   MARSSFKLGIPLERRQAEAARIREKYPNRIPVIVEKAGRSNIADIDKNKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIY +NKDEDGFLYMSYSGENTFG FL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYEENKDEDGFLYMSYSGENTFG-FL 120

Query: 121 GGQ 123
           GGQ
Sbjct: 121 GGQ 122

[Close]

BLAST of CsGy6G033100 vs. TAIR 10
Match: AT4G21980.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 188.7 bits (478), Expect = 2.8e-48
Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0


Query: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60
           MA+SS K+  PLE R++E++RIREKYPDRIPVIVEKAG+SD+ DID+ KYLVP DLTVGQ
Sbjct: 1   MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKL AEKAIFVFVK+TLP T ALMSAIY ++KDEDGFLYM+YSGENTFG
Sbjct: 61  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of CsGy6G033100 vs. TAIR 10
Match: AT4G21980.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 188.7 bits (478), Expect = 2.8e-48
Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 0


Query: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60
           MA+SS K+  PLE R++E++RIREKYPDRIPVIVEKAG+SD+ DID+ KYLVP DLTVGQ
Sbjct: 16  MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 75

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKL AEKAIFVFVK+TLP T ALMSAIY ++KDEDGFLYM+YSGENTFG
Sbjct: 76  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 132

[Close]

BLAST of CsGy6G033100 vs. TAIR 10
Match: AT1G62040.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 184.5 bits (467), Expect = 5.2e-47
Identity = 93/117 (79.49%), Postives = 104/117 (88.89%), Query Frame = 0


Query: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60
           MA SS KL  PLE+R  E++RIREKYPDRIPVIVE+A RSD+ +ID+ KYLVP DLTVGQ
Sbjct: 1   MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKLSAEKAIFVFVK+TLP T A+MSAIY +NKDEDGFLYM+YSGENTFG
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of CsGy6G033100 vs. TAIR 10
Match: AT1G62040.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 184.5 bits (467), Expect = 5.2e-47
Identity = 93/117 (79.49%), Postives = 104/117 (88.89%), Query Frame = 0


Query: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60
           MA SS KL  PLE+R  E++RIREKYPDRIPVIVE+A RSD+ +ID+ KYLVP DLTVGQ
Sbjct: 15  MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 74

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKLSAEKAIFVFVK+TLP T A+MSAIY +NKDEDGFLYM+YSGENTFG
Sbjct: 75  FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 131

[Close]

BLAST of CsGy6G033100 vs. TAIR 10
Match: AT4G04620.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 184.5 bits (467), Expect = 5.2e-47
Identity = 90/118 (76.27%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60
           M ++S KL  PLE R+AE+ RIR KYP+R+PVIVEKAG+SD+ DID+ KYLVP DLT+GQ
Sbjct: 1   MEKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQ 60

Query: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGG 119
           FVYVVRKRIKL AEKAIFVFVK+TLP T ALMSAIY ++KDEDGFLYM+YSGENTFGG
Sbjct: 61  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGG 118

The following BLAST results are available for this feature:

BLAST of CsGy6G033100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2YS06	1.2e-48	83.33	Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=...	[more]
Q6Z1D5	1.2e-48	83.33	Autophagy-related protein 8C OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8C P...	[more]
M1C146	1.0e-47	81.51	Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV...	[more]
Q8LEM4	3.9e-47	79.49	Autophagy-related protein 8a OS=Arabidopsis thaliana OX=3702 GN=ATG8A PE=1 SV=2	[more]
Q9XEB5	7.3e-46	76.27	Autophagy-related protein 8b OS=Arabidopsis thaliana OX=3702 GN=ATG8B PE=1 SV=1	[more]

BLAST of CsGy6G033100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134765.1	7.82e-80	100.00	autophagy-related protein 8C [Cucumis sativus] >XP_011658146.1 autophagy-related...	[more]
XP_008439996.1	2.16e-77	97.56	PREDICTED: autophagy-related protein 8C [Cucumis melo] >XP_008439997.1 PREDICTED...	[more]
KAG6603779.1	5.71e-73	91.87	Autophagy-related protein 8C, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022950063.1	1.64e-72	91.06	autophagy-related protein 8C-like [Cucurbita moschata]	[more]
XP_022142105.1	9.92e-71	91.87	autophagy-related protein 8C-like [Momordica charantia] >XP_022142106.1 autophag...	[more]

BLAST of CsGy6G033100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJW7	3.78e-80	100.00	Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_6G513730 PE=3 SV=1	[more]
A0A1S3B043	1.04e-77	97.56	Autophagy-related protein OS=Cucumis melo OX=3656 GN=LOC103484614 PE=3 SV=1	[more]
A0A5D3CPT6	1.04e-77	97.56	Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1GDU9	7.93e-73	91.06	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111453258 PE=3 SV=...	[more]
A0A6J1CL79	4.80e-71	91.87	Autophagy-related protein OS=Momordica charantia OX=3673 GN=LOC111012314 PE=3 SV...	[more]

BLAST of CsGy6G033100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21980.1	2.8e-48	79.49	Ubiquitin-like superfamily protein	[more]
AT4G21980.2	2.8e-48	79.49	Ubiquitin-like superfamily protein	[more]
AT1G62040.1	5.2e-47	79.49	Ubiquitin-like superfamily protein	[more]
AT1G62040.2	5.2e-47	79.49	Ubiquitin-like superfamily protein	[more]
AT4G04620.1	5.2e-47	76.27	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 1..117 e-value: 7.3E-54 score: 183.0
None	No IPR available	PANTHER	PTHR10969:SF77	AUTOPHAGY-RELATED PROTEIN	coord: 1..117
None	No IPR available	CDD	cd16128	Ubl_ATG8	coord: 12..114 e-value: 7.68293E-66 score: 192.676
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 14..117 e-value: 1.1E-48 score: 163.7
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 1..117
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 4..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G033100.2	CsGy6G033100.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006995	cellular response to nitrogen starvation
cellular_component	GO:0016020	membrane
cellular_component	GO:0005874	microtubule