CsGy6G033010 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G033010
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionHydantoin utilization protein B
LocationGy14Chr6: 29955281 .. 29955795 (+)
RNA-Seq ExpressionCsGy6G033010
SyntenyCsGy6G033010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAAAGCTCCTGTTGAAAGCGAACCTCATAATTCCGGTTGCGACTTTTCGTCGAACACATTATACGCAATGGACCTTGAAAATCTCGACGAAACCGTGTGTTCGACACGCAGCCCATGCTTAGGAAATAGCATGTCAGAATTTCCTCGCACAGTAACACGTCGATCAGGAATGAGCGCAGTGGGCGTGGATTGGGGAGACTCCCATTGGAGTAGCGTAAAAGTTAGCTGTAAGCAGCTGTAAACAGAAGCTTAATATTTGAAATTTCCATTCCATAGACGCGAACAAATTGGGAAGAAAAAGAAAATGAAAGCGTCAGAGTTCGTGCTCGGCCTCTATGGGCAAAGATGGGTTCGAATTGGAGAATATTCTCTGAAACTGAGCAATGGCAGAAGCAGAGGAACAGAAGTGGAATCCTAAGCAGAGGAATTATGGCGGAGTTGGACTTGTGGGAGGAAACCTTTCAAAAGCTGATCCGAATTCATTCAATTCTCTTGGATGATCATTCCTGA

mRNA sequence

ATGCCAAAAGCTCCTGTTGAAAGCGAACCTCATAATTCCGGTTGCGACTTTTCGTCGAACACATTATACGCAATGGACCTTGAAAATCTCGACGAAACCGTGTGTTCGACACGCAGCCCATGCTTAGGAAATAGCATGTCAGAATTTCCTCGCACAGTAACACGTCGATCAGGAATGAGCGCAGTGGGCGTGGATTGGGGAGACTCCCATTGGAGTAGCGTAAAAACGCGAACAAATTGGGAAGAAAAAGAAAATGAAAGCGTCAGAGTTCGTGCTCGGCCTCTATGGGCAAAGATGGGTTCGAATTGGAGAATATTCTCTGAAACTGAGCAATGGCAGAAGCAGAGGAACAGAAGTGGAATCCTAAGCAGAGGAATTATGGCGGAGTTGGACTTGTGGGAGGAAACCTTTCAAAAGCTGATCCGAATTCATTCAATTCTCTTGGATGATCATTCCTGA

Coding sequence (CDS)

ATGCCAAAAGCTCCTGTTGAAAGCGAACCTCATAATTCCGGTTGCGACTTTTCGTCGAACACATTATACGCAATGGACCTTGAAAATCTCGACGAAACCGTGTGTTCGACACGCAGCCCATGCTTAGGAAATAGCATGTCAGAATTTCCTCGCACAGTAACACGTCGATCAGGAATGAGCGCAGTGGGCGTGGATTGGGGAGACTCCCATTGGAGTAGCGTAAAAACGCGAACAAATTGGGAAGAAAAAGAAAATGAAAGCGTCAGAGTTCGTGCTCGGCCTCTATGGGCAAAGATGGGTTCGAATTGGAGAATATTCTCTGAAACTGAGCAATGGCAGAAGCAGAGGAACAGAAGTGGAATCCTAAGCAGAGGAATTATGGCGGAGTTGGACTTGTGGGAGGAAACCTTTCAAAAGCTGATCCGAATTCATTCAATTCTCTTGGATGATCATTCCTGA

Protein sequence

MPKAPVESEPHNSGCDFSSNTLYAMDLENLDETVCSTRSPCLGNSMSEFPRTVTRRSGMSAVGVDWGDSHWSSVKTRTNWEEKENESVRVRARPLWAKMGSNWRIFSETEQWQKQRNRSGILSRGIMAELDLWEETFQKLIRIHSILLDDHS*
Homology
[Close]
BLAST of CsGy6G033010 vs. NCBI nr
Match: KGN49101.1 (hypothetical protein Csa_003514 [Cucumis sativus])

HSP 1 Score: 323 bits (827), Expect = 1.57e-111
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 1   MPKAPVESEPHNSGCDFSSNTLYAMDLENLDETVCSTRSPCLGNSMSEFPRTVTRRSGMS 60
           MPKAPVESEPHNSGCDFSSNTLYAMDLENLDETVCSTRSPCLGNSMSEFPRTVTRRSGMS
Sbjct: 1   MPKAPVESEPHNSGCDFSSNTLYAMDLENLDETVCSTRSPCLGNSMSEFPRTVTRRSGMS 60

Query: 61  AVGVDWGDSHWSSVKTRTNWEEKENESVRVRARPLWAKMGSNWRIFSETEQWQKQRNRSG 120
           AVGVDWGDSHWSSVKTRTNWEEKENESVRVRARPLWAKMGSNWRIFSETEQWQKQRNRSG
Sbjct: 61  AVGVDWGDSHWSSVKTRTNWEEKENESVRVRARPLWAKMGSNWRIFSETEQWQKQRNRSG 120

Query: 121 ILSRGIMAELDLWEETFQKLIRIHSILLDDHS 152
           ILSRGIMAELDLWEETFQKLIRIHSILLDDHS
Sbjct: 121 ILSRGIMAELDLWEETFQKLIRIHSILLDDHS 152

[Close]
BLAST of CsGy6G033010 vs. NCBI nr
Match: TYK13037.1 (Hydantoin utilization protein B [Cucumis melo var. makuwa])

HSP 1 Score: 239 bits (609), Expect = 1.26e-78
Identity = 119/152 (78.29%), Postives = 121/152 (79.61%), Query Frame = 0 

Query: 1   MPKAPVESEPHNSGCDFSSNTLYAMDLENLDETVCSTRSPCLGNSMSEFPRTVTRRSGMS 60
           MPKAPVESEPHN GCDFSSN LYA DLENLDETVCSTRSPCLGNSMSEFPRT        
Sbjct: 1   MPKAPVESEPHNFGCDFSSNILYARDLENLDETVCSTRSPCLGNSMSEFPRT-------- 60

Query: 61  AVGVDWGDSHWSSVKTRTNWEEKENESVRVRARPLWAKMGSNWRIFSETEQWQKQRNRSG 120
                          TRTNW EKEN  VRVRARPLWAK GSNWRIFSETEQWQKQRNRSG
Sbjct: 61  ---------------TRTNWGEKENVGVRVRARPLWAKRGSNWRIFSETEQWQKQRNRSG 120

Query: 121 ILSRGIMAELDLWEETFQKLIRIHSILLDDHS 152
           ILS+GIMAELDLWEET+QKLIRI SILLDDHS
Sbjct: 121 ILSKGIMAELDLWEETYQKLIRIRSILLDDHS 129

[Close]
BLAST of CsGy6G033010 vs. ExPASy TrEMBL
Match: A0A0A0KN07 (Hydantoin utilization protein B OS=Cucumis sativus OX=3659 GN=Csa_6G513650 PE=4 SV=1)

HSP 1 Score: 323 bits (827), Expect = 7.58e-112
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 

Query: 1   MPKAPVESEPHNSGCDFSSNTLYAMDLENLDETVCSTRSPCLGNSMSEFPRTVTRRSGMS 60
           MPKAPVESEPHNSGCDFSSNTLYAMDLENLDETVCSTRSPCLGNSMSEFPRTVTRRSGMS
Sbjct: 1   MPKAPVESEPHNSGCDFSSNTLYAMDLENLDETVCSTRSPCLGNSMSEFPRTVTRRSGMS 60

Query: 61  AVGVDWGDSHWSSVKTRTNWEEKENESVRVRARPLWAKMGSNWRIFSETEQWQKQRNRSG 120
           AVGVDWGDSHWSSVKTRTNWEEKENESVRVRARPLWAKMGSNWRIFSETEQWQKQRNRSG
Sbjct: 61  AVGVDWGDSHWSSVKTRTNWEEKENESVRVRARPLWAKMGSNWRIFSETEQWQKQRNRSG 120

Query: 121 ILSRGIMAELDLWEETFQKLIRIHSILLDDHS 152
           ILSRGIMAELDLWEETFQKLIRIHSILLDDHS
Sbjct: 121 ILSRGIMAELDLWEETFQKLIRIHSILLDDHS 152

[Close]
BLAST of CsGy6G033010 vs. ExPASy TrEMBL
Match: A0A5D3CM64 (Hydantoin utilization protein B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006390 PE=4 SV=1)

HSP 1 Score: 239 bits (609), Expect = 6.11e-79
Identity = 119/152 (78.29%), Postives = 121/152 (79.61%), Query Frame = 0 

Query: 1   MPKAPVESEPHNSGCDFSSNTLYAMDLENLDETVCSTRSPCLGNSMSEFPRTVTRRSGMS 60
           MPKAPVESEPHN GCDFSSN LYA DLENLDETVCSTRSPCLGNSMSEFPRT        
Sbjct: 1   MPKAPVESEPHNFGCDFSSNILYARDLENLDETVCSTRSPCLGNSMSEFPRT-------- 60

Query: 61  AVGVDWGDSHWSSVKTRTNWEEKENESVRVRARPLWAKMGSNWRIFSETEQWQKQRNRSG 120
                          TRTNW EKEN  VRVRARPLWAK GSNWRIFSETEQWQKQRNRSG
Sbjct: 61  ---------------TRTNWGEKENVGVRVRARPLWAKRGSNWRIFSETEQWQKQRNRSG 120

Query: 121 ILSRGIMAELDLWEETFQKLIRIHSILLDDHS 152
           ILS+GIMAELDLWEET+QKLIRI SILLDDHS
Sbjct: 121 ILSKGIMAELDLWEETYQKLIRIRSILLDDHS 129

The following BLAST results are available for this feature:
BLAST of CsGy6G033010 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G033010 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49101.11.57e-111100.00hypothetical protein Csa_003514 [Cucumis sativus][more]
TYK13037.11.26e-7878.29Hydantoin utilization protein B [Cucumis melo var. makuwa][more]
BLAST of CsGy6G033010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KN077.58e-112100.00Hydantoin utilization protein B OS=Cucumis sativus OX=3659 GN=Csa_6G513650 PE=4 ... [more]
A0A5D3CM646.11e-7978.29Hydantoin utilization protein B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
BLAST of CsGy6G033010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G033010.2CsGy6G033010.2mRNA