CsGy6G032950 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G032950
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	peroxisomal membrane protein PMP22
Location	Gy14Chr6: 29933719 .. 29936868 (-)
RNA-Seq Expression	CsGy6G032950
Synteny	CsGy6G032950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCTTTAGCCAAGAAGGCTTTAAACAAGTATCTTTCCCAACTTAATCATCACCCTTTGAGAACCAAGGTGACTTTTCCCTCGCTTTGAATCTCTCTTTTTTATGGGCTTTCTATATTTGCCTTGTTTTCTCCTTTTCTTTATACTGGGGTCTTTCGCTACTTGAGATTTGTAAAACTTTTAGTTTATTCCCCACATTTTTCTACCAGTTCAGTGAGCTTCTAAGTAACGGGCATATCGTGAAGCTGAAAGATATGCCCTTTTTCTAATTGTTTCATTTTGAAGATCTAAATATAACAAACATTCAGCATTTAACTTATTGGTCATATGATATCTCGACCCGGAGGTCAGACTTCAAGCCCCACTTCACACGTTGTTCGACTAAACATTAATGAACTCTGGATATATTATTTATTAACATTGAAATCTGTCAACAGCTAGTTTGGGGCTTTTGATATTTCAATGATCCATAGTTTTGGATGGAAATGGCTTTGTCATTAACTAAGATACTTAAAATATTGTGTTGTTTCGATGGCTTGAAATCAGACCTTTTTCAGATTGAGTTTATTTAAATAATGGTAATAAGCAAGTGTATTGGCTTTGGAACTTTCCTCACTTCCTTCTTTATCTGTTGGTTTTGAACTCGAGGATGAGCTAATTTGTTTAAGGAGGGAAATTGAAGTACTGAGATTTATGGACTAATTAGTTTAGTTTTTTCAAATACTTGGACCTCGATCCGTAACTATTTCACTTTTCTATTTTTCAAAACTAAGTCTATTTTCTCAAATTTTTACCATGATAGTAAAATAGTTGAGTTATTGGCCAAATTTCAAAAAGAAAAGTAAATTTTAAAGACTACTTTTTTTTAGTTTTCAAAATTTAGCTTTGCTTTTAAAATCACTCAAATAAAATTTGGATACAAATGGATGGAAGTGAGACTTATAGATTATAGATTGATTTTCAAGAACCAAAAACTAAATGGTTACCAAACAAGGTCTTAATTAGTTGTTACTTACTCTATAAATCAACCATCAGGGGTTTGTTCAGTGGTTAATGGTTGTAGCTTTGACAAAGTACTTAGAGGGAATGAGTTTAGTTCATGGTAACACTCATGGATTTATTGTCTACTAGTTTCCATGACGTGCAAATGTTGTAAGTTCATGCGAGTTGTCTTGTGAGATTAGTCGAGGTTAATCTCTTGTGTTTGCGTACTTTGAATCAAAGTCCTTTTGAGTTATAGTTCTTCAAGAATTTTCTCGTTTGTATTCAAGGCTTAAGCTACACCATTGTAGATGGGACCCTTTTGTTTGATGTGTCTTTTTGTTGGACTAGGTAATCACATCTGGAGTATTGGTTGCATTGAGCGATGTGACTTCCCAGAAGCTTACTGGCATACAGAAACTTCAATTGAAGCGAATTTTACTTAAAGTGGTATGGTCCTCTCTAGGTTCATTCTGAATACTGAATAGTGAACATATTTGTTGGAAATCTCCTTTCTATAGGAAAACAATAGTTTGAATGCATGATCTTTGATAAGCCCAACTTCCATGCTTGTGTGTATTGTTGAAAGAAAACAATGGTTCTCGCTCATGATTGGCTCCACGCAGCTTTATGGATGTCTTTACCTTGGACCTTTTGCCCATTATCTGCACCAAATACTAGATAAAATCTTCCACGGGAAAAGAGACACAAAAACGGTTGCCAAGAAGGTATATACTATGTACTGTCCTCTTCCATTTATTCTTCCTTTTGGTTCTCAGAATTGAGGTAATTGGTTTTTGAAGTTTGTTATCAACTAGGAGCAGTACCATACTATTGTTAGTTCCCATTACATTCCACTGGCAACCTACATTATTGAAATTATCATACTGCTTTGTGATAGTCTGTAGATATCGTCGTATCAAAGAGTGAGTATTGTTTCATAGTCATATCATCAAGAAAAACTGTTGCGGTGGTATAGAAAATTTTCCAAGAGAGCTTATCAAATTCAACAAATTTGAGAGTTATCGACATCTCAAAGAACATTTGCGATGAACTAAGTGAGATACAGAGGTTGGGGTGGGTGGCGAATGGTGAATTTAGTTAGTGAAAAGTGTTAAATTCGTTGTATTGTATACGAGTATTATGACTATATTTAGTTTTTTTTCCTCAGGTAGCGTTGGAACAATTGACAGCCTCTCCTTGGAACCACTTTGTCTTTTTGGTTTATTACGGACTGATTATTGAGGGTGAGTATAAATTTCAAGATATCCCTATGAAGAAGCAGCCATCGATTTCTCAGACACCATTTATTTATTTCAATAATAGCTGTATACTGATGGTTGGCATATCGAAAAAAGGCAGTAAAAAGGACCATTAAAAAGAAGCTTGAATAAAGGCAATGAACCTTGGTAACTTTAGCTGCTAAAACTATTGCTTCTATTAAAGAATTCCCTTCAGCAAAGTTTCTAATCCATGTCCAAACTTTTTACTTAAACATTATGATGAAAGAGAGAGAGAGAGAGAGATTCTGATTTTATTTCTACTATATCCTTGCTTTCAAATGCAGGAAGGACTTGGGTCCAGGTAAAGGCTAAGGTGAAAAAGGAATTTCCTTCACTCCAGCTAACTGCTTGGATGGTAATTCCCTTTTCCCACTCATTAGCTTTGCTTCATTTGTCAACTCGTTTTATCGGGGTAATCATTGATAGGAGTTATCAATGATATAGTCTATGTGGTAGAGTCTGGTGCTGGATCTAAATTTTGCTGTATCTGCATTTTTTTTTTTTTTTGTATTGTGCTATATCTACTAATATTTTGGGTCTGGTTGGGAGCTGCTTCTTTCATTTAATGGTGTTCATTGAATCCCATTAGAACTCGTTCTCATATTAATAGAATCTATAAATTTTCAGTTCTGGCCATTTGTTGGTTGGATAAATCACCAGTTTATGCCTCTTCAGTTGCGCGTCATCTTCCATAGCCTGGTTGCGTTCTGTTGGTACGCATACTTCCTTGGTTTCGTTTCACTTGGTTATATCTAAACCATTCTTAGGTAGTTTTATATTCTCTCTAGTTGCTAACACCCCTCAAATGTTTATTTATTTGGTTGTTTCCAGGGGATTATTCTTGAATGTTCGAGCAAAATCCGTGACGTTGAACAAATCTTAG

mRNA sequence

ATGGGTTCTTTAGCCAAGAAGGCTTTAAACAAGTATCTTTCCCAACTTAATCATCACCCTTTGAGAACCAAGGTAATCACATCTGGAGTATTGGTTGCATTGAGCGATGTGACTTCCCAGAAGCTTACTGGCATACAGAAACTTCAATTGAAGCGAATTTTACTTAAAGTGCTTTATGGATGTCTTTACCTTGGACCTTTTGCCCATTATCTGCACCAAATACTAGATAAAATCTTCCACGGGAAAAGAGACACAAAAACGGTTGCCAAGAAGGTAGCGTTGGAACAATTGACAGCCTCTCCTTGGAACCACTTTGTCTTTTTGGTTTATTACGGACTGATTATTGAGGGAAGGACTTGGGTCCAGGTAAAGGCTAAGGTGAAAAAGGAATTTCCTTCACTCCAGCTAACTGCTTGGATGTTCTGGCCATTTGTTGGTTGGATAAATCACCAGTTTATGCCTCTTCAGTTGCGCGTCATCTTCCATAGCCTGGTTGCGTTCTGTTGGGGATTATTCTTGAATGTTCGAGCAAAATCCGTGACGTTGAACAAATCTTAG

Coding sequence (CDS)

ATGGGTTCTTTAGCCAAGAAGGCTTTAAACAAGTATCTTTCCCAACTTAATCATCACCCTTTGAGAACCAAGGTAATCACATCTGGAGTATTGGTTGCATTGAGCGATGTGACTTCCCAGAAGCTTACTGGCATACAGAAACTTCAATTGAAGCGAATTTTACTTAAAGTGCTTTATGGATGTCTTTACCTTGGACCTTTTGCCCATTATCTGCACCAAATACTAGATAAAATCTTCCACGGGAAAAGAGACACAAAAACGGTTGCCAAGAAGGTAGCGTTGGAACAATTGACAGCCTCTCCTTGGAACCACTTTGTCTTTTTGGTTTATTACGGACTGATTATTGAGGGAAGGACTTGGGTCCAGGTAAAGGCTAAGGTGAAAAAGGAATTTCCTTCACTCCAGCTAACTGCTTGGATGTTCTGGCCATTTGTTGGTTGGATAAATCACCAGTTTATGCCTCTTCAGTTGCGCGTCATCTTCCATAGCCTGGTTGCGTTCTGTTGGGGATTATTCTTGAATGTTCGAGCAAAATCCGTGACGTTGAACAAATCTTAG

Protein sequence

MGSLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYGCLYLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRAKSVTLNKS*

Homology

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BLAST of CsGy6G032950 vs. ExPASy Swiss-Prot
Match: Q9ZS51 (Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana OX=3702 GN=PMP22 PE=1 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 7.1e-61
Identity = 107/177 (60.45%), Postives = 140/177 (79.10%), Query Frame = 0


Query: 6   KKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYGCLYLG 65
           K  L +YLSQL  HPLRTK IT+GVL  +SDV SQKL+GIQK+QL+R+LLKV++   +LG
Sbjct: 8   KTTLQRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLG 67

Query: 66  PFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTWVQVKA 125
           P  H+ H  LDK F GK+DT+TVAKKV LEQLT SP NH +F++YYG++IE   W  V+ 
Sbjct: 68  PAGHFFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLVRE 127

Query: 126 KVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRAKSVTL 183
           ++KK +P++QLTAW F+P VGWIN++++PL  RVI HSLVAF WG+FL +RA+S+TL
Sbjct: 128 RIKKTYPTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFFWGIFLTLRARSMTL 184

[Close]

BLAST of CsGy6G032950 vs. ExPASy Swiss-Prot
Match: Q54GD8 (PXMP2/4 family protein 3 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290223 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.0e-19
Identity = 56/177 (31.64%), Postives = 95/177 (53.67%), Query Frame = 0


Query: 3   SLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYGCL 62
           SL       Y+ +L   P++TK +TS  L  +S V +QK    +K+    ++   ++G L
Sbjct: 8   SLTDAVTTWYMKKLKSKPIQTKALTSATLSFISSVVAQKFIEKKKINWNAVVKFTVWG-L 67

Query: 63  YLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGL--IIEGRTW 122
              P  HY H ILD++F   +D      K+ ++QL  +P   F+ + +Y +  I++G+  
Sbjct: 68  ISSPLVHYWHIILDRLFKNIKDKYQSWGKLIVDQLVFAP---FINIAFYSVLAILDGKPK 127

Query: 123 VQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRA 178
             +       FP+L+  +W  WP    IN +F+P  LRV+F +LV FCWG++L++ A
Sbjct: 128 SILFKLYFDLFPTLK-ASWKVWPLAQLINFRFVPSHLRVLFGNLVGFCWGIYLSILA 179

[Close]

BLAST of CsGy6G032950 vs. ExPASy Swiss-Prot
Match: Q54FR4 (PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.4e-16
Identity = 54/172 (31.40%), Postives = 92/172 (53.49%), Query Frame = 0


Query: 6   KKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKL----TGIQKLQLKRILLKVLYGC 65
           K A + YLSQL+ +P+ TK +TSG L  +SD   Q +       +K   KR +   ++G 
Sbjct: 9   KLAQSHYLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFGF 68

Query: 66  LYLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTWV 125
              GP  HY  + LDK F  K+  +    K+ ++Q+  SP  +F+F    G I+EG++  
Sbjct: 69  AVTGPLFHYWFKYLDKHF-PKKSYRHAFIKLTIDQVVCSPVFNFLFFSGMG-ILEGKSKD 128

Query: 126 QVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFL 174
            +  K+KK++ +  ++  + WPF+ ++N  ++    RV F ++    WG FL
Sbjct: 129 DIVEKLKKDWLTTYVSDCVVWPFINFVNFAYISSIHRVTFMNVCNIGWGAFL 178

[Close]

BLAST of CsGy6G032950 vs. ExPASy Swiss-Prot
Match: P42925 (Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 5.3e-16
Identity = 56/180 (31.11%), Postives = 104/180 (57.78%), Query Frame = 0


Query: 1   MGSLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQK-----LQLKRILL 60
           +GSL K+AL +YL  L  +P+ TK ++SG+L AL ++ +Q +   Q+     L++  +L 
Sbjct: 14  LGSLPKRALAQYLLLLKLYPVLTKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLR 73

Query: 61  KVLYGCLYLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGL-I 120
            ++YG    GP +HYL+  ++     +    +V K++ L++L  +P   F+ L ++ + +
Sbjct: 74  YLVYGLFVTGPLSHYLYLFMEYSVPPEVPWASV-KRLLLDRLFFAP--TFLLLFFFVMNL 133

Query: 121 IEGRTWVQVKAKVKKEF-PSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFL 174
           +EG+      AK++  F P+LQ+  W  W  + +IN  ++PLQ RV+F ++ A  W  +L
Sbjct: 134 LEGKNVSVFVAKMRSGFWPALQMN-WRMWTPLQFININYVPLQFRVLFANMAALFWYAYL 189

[Close]

BLAST of CsGy6G032950 vs. ExPASy Swiss-Prot
Match: Q2KIY1 (Peroxisomal membrane protein 2 OS=Bos taurus OX=9913 GN=PXMP2 PE=2 SV=3)

HSP 1 Score: 82.8 bits (203), Expect = 4.5e-15
Identity = 57/184 (30.98%), Postives = 98/184 (53.26%), Query Frame = 0


Query: 1   MGSLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQ-------KLTGIQKLQLKRI 60
           +G L ++AL++YL  L  +P+ TK  TSG+L AL +  +Q       K    QKL +   
Sbjct: 14  LGPLPRRALSQYLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDVSGP 73

Query: 61  LLKVLYGCLYLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGL 120
           L   +YG  + GP  H+ + ++++    +     + K++ L++L  +P     FL  + L
Sbjct: 74  LRYAIYGFFFTGPLGHFFYLLMERWIPSEVPLAGI-KRLLLDRLLFAP----AFLSLFFL 133

Query: 121 I---IEGRTWVQVKAKVKKEF-PSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCW 174
           +   +EG+      AK+K  F P+L++  W  W  V +IN  ++P+Q RV+F +LVA  W
Sbjct: 134 VMNFLEGQDTAAFAAKMKSGFWPALRMN-WRVWTPVQFININYIPVQFRVLFANLVALFW 191

[Close]

BLAST of CsGy6G032950 vs. NCBI nr
Match: XP_004134772.1 (peroxisomal membrane protein PMP22 [Cucumis sativus] >KGN49094.1 hypothetical protein Csa_004289 [Cucumis sativus])

HSP 1 Score: 377 bits (968), Expect = 6.03e-132
Identity = 184/185 (99.46%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MGSLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG 60
           MGSLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG
Sbjct: 1   MGSLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG 60

Query: 61  CLYLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTW 120
           CLYLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTW
Sbjct: 61  CLYLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTW 120

Query: 121 VQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRAKSV 180
           VQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQ RVIFHSLVAFCWGLFLNVRAKSV
Sbjct: 121 VQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQFRVIFHSLVAFCWGLFLNVRAKSV 180

Query: 181 TLNKS 185
           TLNKS
Sbjct: 181 TLNKS 185

[Close]

BLAST of CsGy6G032950 vs. NCBI nr
Match: XP_008440019.1 (PREDICTED: peroxisomal membrane protein PMP22 [Cucumis melo])

HSP 1 Score: 370 bits (951), Expect = 2.36e-129
Identity = 181/185 (97.84%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 1   MGSLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG 60
           MGSLAKK LNKYLSQLN HPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG
Sbjct: 1   MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG 60

Query: 61  CLYLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTW 120
           CLYLGPF+HYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTW
Sbjct: 61  CLYLGPFSHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTW 120

Query: 121 VQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRAKSV 180
           VQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRAKSV
Sbjct: 121 VQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRAKSV 180

Query: 181 TLNKS 185
           TL KS
Sbjct: 181 TLKKS 185

[Close]

BLAST of CsGy6G032950 vs. NCBI nr
Match: XP_038882944.1 (peroxisomal membrane protein PMP22-like [Benincasa hispida])

HSP 1 Score: 328 bits (841), Expect = 1.39e-112
Identity = 152/185 (82.16%), Postives = 170/185 (91.89%), Query Frame = 0


Query: 1   MGSLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG 60
           MGSLAKK L+KYLSQL  HPLRTK+ITSGVL+A++DV SQKL GIQ++QLKRIL+K++YG
Sbjct: 1   MGSLAKKGLDKYLSQLYQHPLRTKIITSGVLIAINDVASQKLIGIQRIQLKRILIKLVYG 60

Query: 61  CLYLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTW 120
           CLYLGPF HYLHQILDKIF GKRD+KTV KKV LEQ T+SPWNHFVFLVYYGL IE RTW
Sbjct: 61  CLYLGPFGHYLHQILDKIFQGKRDSKTVVKKVVLEQFTSSPWNHFVFLVYYGLFIERRTW 120

Query: 121 VQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRAKSV 180
           VQVKAKV+KEFPS+QLTAWMFWPF  WINHQF+PLQLR +FH+LVAFCWGLFLN+RAKSV
Sbjct: 121 VQVKAKVRKEFPSVQLTAWMFWPFAAWINHQFVPLQLRALFHNLVAFCWGLFLNLRAKSV 180

Query: 181 TLNKS 185
           TLNKS
Sbjct: 181 TLNKS 185

[Close]

BLAST of CsGy6G032950 vs. NCBI nr
Match: XP_023517819.1 (peroxisomal membrane protein PMP22 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023517823.1 peroxisomal membrane protein PMP22 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023517824.1 peroxisomal membrane protein PMP22 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320 bits (820), Expect = 2.14e-109
Identity = 154/183 (84.15%), Postives = 171/183 (93.44%), Query Frame = 0


Query: 3   SLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYGCL 62
           SLAKKA  KY+SQL  HPLRTKVITSGVL+A+SDVTSQKLTGIQKLQL+RILLKVLYGCL
Sbjct: 2   SLAKKAFEKYVSQLYQHPLRTKVITSGVLIAISDVTSQKLTGIQKLQLRRILLKVLYGCL 61

Query: 63  YLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTWVQ 122
           YLGPF H+LHQIL+KIF GKRD+KTVAKKV +EQLT+SP +HFVFLVYYGLIIE R WV 
Sbjct: 62  YLGPFGHFLHQILEKIFQGKRDSKTVAKKVLVEQLTSSPLSHFVFLVYYGLIIERRPWVV 121

Query: 123 VKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRAKSVTL 182
           VKAKVKKEFPS+QLTAWMFWPFVGWINHQ++PLQLRVIFHSLVAF WG+FLN+RAKS+T+
Sbjct: 122 VKAKVKKEFPSVQLTAWMFWPFVGWINHQYVPLQLRVIFHSLVAFVWGIFLNLRAKSLTV 181

Query: 183 NKS 185
           NKS
Sbjct: 182 NKS 184

[Close]

BLAST of CsGy6G032950 vs. NCBI nr
Match: XP_023003048.1 (peroxisomal membrane protein PMP22 isoform X1 [Cucurbita maxima] >XP_023003049.1 peroxisomal membrane protein PMP22 isoform X1 [Cucurbita maxima])

HSP 1 Score: 318 bits (816), Expect = 8.71e-109
Identity = 154/183 (84.15%), Postives = 170/183 (92.90%), Query Frame = 0


Query: 3   SLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYGCL 62
           SLAKKA  KY+SQL  HPLRTKVITSGVLVA++DVTSQKL GIQKLQL+RILLKVLYGCL
Sbjct: 2   SLAKKAFEKYVSQLYQHPLRTKVITSGVLVAINDVTSQKLIGIQKLQLRRILLKVLYGCL 61

Query: 63  YLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTWVQ 122
           YLGPF H+LHQILDKIF GKRD+KTVAKKV +EQLT+SP +HFVFLVYYGLIIE R WV 
Sbjct: 62  YLGPFGHFLHQILDKIFQGKRDSKTVAKKVLVEQLTSSPLSHFVFLVYYGLIIERRPWVV 121

Query: 123 VKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRAKSVTL 182
           VKAKVKKEFPS+QLTAWMFWPFVGWINHQ++PLQLRVIFHSLVAF WG+FLN+RAKS+T+
Sbjct: 122 VKAKVKKEFPSVQLTAWMFWPFVGWINHQYIPLQLRVIFHSLVAFVWGIFLNLRAKSLTV 181

Query: 183 NKS 185
           NKS
Sbjct: 182 NKS 184

[Close]

BLAST of CsGy6G032950 vs. ExPASy TrEMBL
Match: A0A0A0KJV4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513580 PE=3 SV=1)

HSP 1 Score: 377 bits (968), Expect = 2.92e-132
Identity = 184/185 (99.46%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MGSLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG 60
           MGSLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG
Sbjct: 1   MGSLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG 60

Query: 61  CLYLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTW 120
           CLYLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTW
Sbjct: 61  CLYLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTW 120

Query: 121 VQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRAKSV 180
           VQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQ RVIFHSLVAFCWGLFLNVRAKSV
Sbjct: 121 VQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQFRVIFHSLVAFCWGLFLNVRAKSV 180

Query: 181 TLNKS 185
           TLNKS
Sbjct: 181 TLNKS 185

[Close]

BLAST of CsGy6G032950 vs. ExPASy TrEMBL
Match: A0A1S3B0V4 (peroxisomal membrane protein PMP22 OS=Cucumis melo OX=3656 GN=LOC103484622 PE=3 SV=1)

HSP 1 Score: 370 bits (951), Expect = 1.14e-129
Identity = 181/185 (97.84%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 1   MGSLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG 60
           MGSLAKK LNKYLSQLN HPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG
Sbjct: 1   MGSLAKKGLNKYLSQLNQHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG 60

Query: 61  CLYLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTW 120
           CLYLGPF+HYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTW
Sbjct: 61  CLYLGPFSHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTW 120

Query: 121 VQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRAKSV 180
           VQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRAKSV
Sbjct: 121 VQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRAKSV 180

Query: 181 TLNKS 185
           TL KS
Sbjct: 181 TLKKS 185

[Close]

BLAST of CsGy6G032950 vs. ExPASy TrEMBL
Match: A0A6J1KS76 (peroxisomal membrane protein PMP22 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496773 PE=3 SV=1)

HSP 1 Score: 318 bits (816), Expect = 4.22e-109
Identity = 154/183 (84.15%), Postives = 170/183 (92.90%), Query Frame = 0


Query: 3   SLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYGCL 62
           SLAKKA  KY+SQL  HPLRTKVITSGVLVA++DVTSQKL GIQKLQL+RILLKVLYGCL
Sbjct: 2   SLAKKAFEKYVSQLYQHPLRTKVITSGVLVAINDVTSQKLIGIQKLQLRRILLKVLYGCL 61

Query: 63  YLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTWVQ 122
           YLGPF H+LHQILDKIF GKRD+KTVAKKV +EQLT+SP +HFVFLVYYGLIIE R WV 
Sbjct: 62  YLGPFGHFLHQILDKIFQGKRDSKTVAKKVLVEQLTSSPLSHFVFLVYYGLIIERRPWVV 121

Query: 123 VKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRAKSVTL 182
           VKAKVKKEFPS+QLTAWMFWPFVGWINHQ++PLQLRVIFHSLVAF WG+FLN+RAKS+T+
Sbjct: 122 VKAKVKKEFPSVQLTAWMFWPFVGWINHQYIPLQLRVIFHSLVAFVWGIFLNLRAKSLTV 181

Query: 183 NKS 185
           NKS
Sbjct: 182 NKS 184

[Close]

BLAST of CsGy6G032950 vs. ExPASy TrEMBL
Match: A0A6J1EMD3 (peroxisomal membrane protein PMP22 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433873 PE=3 SV=1)

HSP 1 Score: 318 bits (814), Expect = 8.50e-109
Identity = 153/183 (83.61%), Postives = 170/183 (92.90%), Query Frame = 0


Query: 3   SLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYGCL 62
           SLAKKA  KY+SQL  HPLRTKVITSGVL+A+SDVTSQKL GIQKLQL+RILLKVLYGCL
Sbjct: 2   SLAKKAFEKYVSQLYQHPLRTKVITSGVLIAISDVTSQKLIGIQKLQLRRILLKVLYGCL 61

Query: 63  YLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTWVQ 122
           YLGPF H+LHQIL+KIF GKRD+KTVAKKV +EQLT+SP +HFVFLVYYGLIIE R WV 
Sbjct: 62  YLGPFGHFLHQILEKIFQGKRDSKTVAKKVLVEQLTSSPLSHFVFLVYYGLIIERRPWVV 121

Query: 123 VKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRAKSVTL 182
           VKAKVKKEFPS+QLTAWMFWPFVGWINHQ++PLQLRVIFHSLVAF WG+FLN+RAKS+T+
Sbjct: 122 VKAKVKKEFPSVQLTAWMFWPFVGWINHQYVPLQLRVIFHSLVAFVWGIFLNLRAKSLTV 181

Query: 183 NKS 185
           NKS
Sbjct: 182 NKS 184

[Close]

BLAST of CsGy6G032950 vs. ExPASy TrEMBL
Match: A0A6J1CLF0 (peroxisomal membrane protein PMP22 OS=Momordica charantia OX=3673 GN=LOC111012246 PE=3 SV=1)

HSP 1 Score: 311 bits (797), Expect = 3.43e-106
Identity = 144/185 (77.84%), Postives = 166/185 (89.73%), Query Frame = 0


Query: 1   MGSLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG 60
           MGS+AKK L KY+SQL  HPLRTK+IT+GVL  +SDV SQKLTGIQKLQ KR++LKVL+G
Sbjct: 1   MGSVAKKGLQKYVSQLQQHPLRTKIITAGVLSGISDVVSQKLTGIQKLQFKRLILKVLFG 60

Query: 61  CLYLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTW 120
            +YLGPF HYLHQILDKIF GKRD+KTVAKKV LEQLTASPWNHFVFLVYYGL+IE R W
Sbjct: 61  AVYLGPFGHYLHQILDKIFKGKRDSKTVAKKVVLEQLTASPWNHFVFLVYYGLVIERRPW 120

Query: 121 VQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRAKSV 180
           V VKAKVKK+FPS+QLTAWMFWP VGW+NHQ++PLQLRV+FHSL+AF WG+FLN+RA+S+
Sbjct: 121 VHVKAKVKKDFPSVQLTAWMFWPIVGWLNHQYVPLQLRVVFHSLIAFFWGIFLNLRARSL 180

Query: 181 TLNKS 185
            L KS
Sbjct: 181 ALIKS 185

[Close]

BLAST of CsGy6G032950 vs. TAIR 10
Match: AT4G14305.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 237.3 bits (604), Expect = 1.0e-62
Identity = 103/185 (55.68%), Postives = 141/185 (76.22%), Query Frame = 0


Query: 1   MGSLAKKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYG 60
           M  LAK A  KYL QL  HPLRTK IT+GVL   SD  +QK++G++++Q +R+LL +LYG
Sbjct: 1   MSDLAKDAWRKYLIQLQAHPLRTKAITAGVLAGCSDAIAQKISGVKRIQFRRLLLLMLYG 60

Query: 61  CLYLGPFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTW 120
             Y GPF H+ H+++D IF GK+   TVAKKV LEQLT+SPWN+F+F+ YYGL++EGR W
Sbjct: 61  FAYGGPFGHFFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPW 120

Query: 121 VQVKAKVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRAKSV 180
             VK K+ K++P++QLTAW FWP VGW+N+Q++PLQ RV+F S VA CW +FLN++A+S 
Sbjct: 121 KLVKHKLGKDYPTIQLTAWKFWPIVGWVNYQYVPLQFRVLFSSFVASCWSIFLNLKARSP 180

Query: 181 TLNKS 186
            +  +
Sbjct: 181 VIKNA 185

[Close]

BLAST of CsGy6G032950 vs. TAIR 10
Match: AT4G04470.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 235.0 bits (598), Expect = 5.0e-62
Identity = 107/177 (60.45%), Postives = 140/177 (79.10%), Query Frame = 0


Query: 6   KKALNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLTGIQKLQLKRILLKVLYGCLYLG 65
           K  L +YLSQL  HPLRTK IT+GVL  +SDV SQKL+GIQK+QL+R+LLKV++   +LG
Sbjct: 8   KTTLQRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLG 67

Query: 66  PFAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTWVQVKA 125
           P  H+ H  LDK F GK+DT+TVAKKV LEQLT SP NH +F++YYG++IE   W  V+ 
Sbjct: 68  PAGHFFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLVRE 127

Query: 126 KVKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRAKSVTL 183
           ++KK +P++QLTAW F+P VGWIN++++PL  RVI HSLVAF WG+FL +RA+S+TL
Sbjct: 128 RIKKTYPTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFFWGIFLTLRARSMTL 184

[Close]

BLAST of CsGy6G032950 vs. TAIR 10
Match: AT4G14305.2 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 205.3 bits (521), Expect = 4.3e-53
Identity = 85/157 (54.14%), Postives = 122/157 (77.71%), Query Frame = 0


Query: 29  GVLVALSDVTSQKLTGIQKLQLKRILLKVLYGCLYLGPFAHYLHQILDKIFHGKRDTKTV 88
           GVL   SD  +QK++G++++Q +R+LL +LYG  Y GPF H+ H+++D IF GK+   TV
Sbjct: 17  GVLAGCSDAIAQKISGVKRIQFRRLLLLMLYGFAYGGPFGHFFHKLMDTIFKGKKGNSTV 76

Query: 89  AKKVALEQLTASPWNHFVFLVYYGLIIEGRTWVQVKAKVKKEFPSLQLTAWMFWPFVGWI 148
           AKKV LEQLT+SPWN+F+F+ YYGL++EGR W  VK K+ K++P++QLTAW FWP VGW+
Sbjct: 77  AKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPWKLVKHKLGKDYPTIQLTAWKFWPIVGWV 136

Query: 149 NHQFMPLQLRVIFHSLVAFCWGLFLNVRAKSVTLNKS 186
           N+Q++PLQ RV+F S VA CW +FLN++A+S  +  +
Sbjct: 137 NYQYVPLQFRVLFSSFVASCWSIFLNLKARSPVIKNA 173

[Close]

BLAST of CsGy6G032950 vs. TAIR 10
Match: AT5G43140.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 85.1 bits (209), Expect = 6.4e-17
Identity = 50/171 (29.24%), Postives = 85/171 (49.71%), Query Frame = 0


Query: 9   LNKYLSQLNHHPLRTKVITSGVLVALSDVTSQKLT--GIQKLQLKRILLKVLYGCLYLGP 68
           L  YL +L  HP  TK IT+ V+   +D+TSQ +T        L R      +G ++LGP
Sbjct: 79  LRWYLRKLESHPFMTKSITTSVIYMAADLTSQMITMEPTGSFDLIRTARMASFGLIFLGP 138

Query: 69  FAHYLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGLIIEGRTWVQVKAK 128
             H     L KI   KRD  T  KK+ + Q+   P ++ VF   Y   ++G    ++ A+
Sbjct: 139 SQHLWFSYLSKIL-PKRDVLTTFKKIMMGQVLFGPVSNTVF-YSYNAALQGENSEEIVAR 198

Query: 129 VKKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRA 178
           +K++         M+WP   ++  +++P+ L+ + +S  A+ W ++L   A
Sbjct: 199 LKRDLLPTLKNGLMYWPVCDFVTFKYVPVHLQPLMNSSCAYIWTIYLTYMA 247

[Close]

BLAST of CsGy6G032950 vs. TAIR 10
Match: AT2G14860.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 72.4 bits (176), Expect = 4.3e-13
Identity = 43/170 (25.29%), Postives = 83/170 (48.82%), Query Frame = 0


Query: 12  YLSQLNHHPLRTKVITSGVLVALSDVTSQKL--TGIQKLQLKRILLKVLYGCLYLGPFAH 71
           YL  +  HP+ TK +TS ++   +D++SQ +  T  +   L R      YG   LGP  H
Sbjct: 77  YLGMVKSHPVVTKSVTSSLIYIAADLSSQTIAKTSSESYDLVRTARMGGYGLFVLGPTLH 136

Query: 72  YLHQILDKIFHGKRDTKTVAKKVALEQLTASPWNHFVFLVYYGL--IIEGRTWVQVKAKV 131
           Y    + ++F  K+D  T  KK+A+ Q    P    + ++++ L   ++G     + A++
Sbjct: 137 YWFNFMSRLF-PKQDLITTFKKMAMGQTIYGP---IMTVIFFSLNASLQGERGSVILARL 196

Query: 132 KKEFPSLQLTAWMFWPFVGWINHQFMPLQLRVIFHSLVAFCWGLFLNVRA 178
           K++         M+WP   +I  +F P+ L+ +  +  ++ W +++   A
Sbjct: 197 KRDLLPALFNGVMYWPLCDFITFRFFPVHLQPLVSNSFSYVWTIYMTYMA 242

The following BLAST results are available for this feature:

BLAST of CsGy6G032950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZS51	7.1e-61	60.45	Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana OX=3702 GN=PMP22 PE=1...	[more]
Q54GD8	3.0e-19	31.64	PXMP2/4 family protein 3 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290223 PE...	[more]
Q54FR4	2.4e-16	31.40	PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE...	[more]
P42925	5.3e-16	31.11	Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2	[more]
Q2KIY1	4.5e-15	30.98	Peroxisomal membrane protein 2 OS=Bos taurus OX=9913 GN=PXMP2 PE=2 SV=3	[more]

BLAST of CsGy6G032950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134772.1	6.03e-132	99.46	peroxisomal membrane protein PMP22 [Cucumis sativus] >KGN49094.1 hypothetical pr...	[more]
XP_008440019.1	2.36e-129	97.84	PREDICTED: peroxisomal membrane protein PMP22 [Cucumis melo]	[more]
XP_038882944.1	1.39e-112	82.16	peroxisomal membrane protein PMP22-like [Benincasa hispida]	[more]
XP_023517819.1	2.14e-109	84.15	peroxisomal membrane protein PMP22 isoform X1 [Cucurbita pepo subsp. pepo] >XP_0...	[more]
XP_023003048.1	8.71e-109	84.15	peroxisomal membrane protein PMP22 isoform X1 [Cucurbita maxima] >XP_023003049.1...	[more]

BLAST of CsGy6G032950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJV4	2.92e-132	99.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513580 PE=3 SV=1	[more]
A0A1S3B0V4	1.14e-129	97.84	peroxisomal membrane protein PMP22 OS=Cucumis melo OX=3656 GN=LOC103484622 PE=3 ...	[more]
A0A6J1KS76	4.22e-109	84.15	peroxisomal membrane protein PMP22 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1EMD3	8.50e-109	83.61	peroxisomal membrane protein PMP22 isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1CLF0	3.43e-106	77.84	peroxisomal membrane protein PMP22 OS=Momordica charantia OX=3673 GN=LOC11101224...	[more]

BLAST of CsGy6G032950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14305.1	1.0e-62	55.68	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT4G04470.1	5.0e-62	60.45	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT4G14305.2	4.3e-53	54.14	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT5G43140.1	6.4e-17	29.24	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT2G14860.1	4.3e-13	25.29	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007248	Mpv17/PMP22	PFAM	PF04117	Mpv17_PMP22	coord: 114..174 e-value: 6.0E-18 score: 64.8
IPR007248	Mpv17/PMP22	PANTHER	PTHR11266	PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17	coord: 1..184
None	No IPR available	PANTHER	PTHR11266:SF86	PEROXISOMAL MEMBRANE PROTEIN PMP22	coord: 1..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G032950.2	CsGy6G032950.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane