CsGy6G032725 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G032725
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr6: 29781918 .. 29782118 (-)
RNA-Seq Expression	CsGy6G032725
Synteny	CsGy6G032725

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAATGAAACAGAAACAGAGGAGCTGGATTCAGTTGAAAAAAGAAGAACAAATAAAGCGGTTCCTTCTTTAAAAAGTTCGACTTTTGATCAAAGAGACGCCAAATCACGAGACGCTTCTGAACTATCTGCACTTTTTCATTGTCTTTCTACTGCCAAACGACCTAATCCTTCTCCATATCATCATACAGAACCGTGA

mRNA sequence

ATGGGAAATGAAACAGAAACAGAGGAGCTGGATTCAGTTGAAAAAAGAAGAACAAATAAAGCGGTTCCTTCTTTAAAAAGTTCGACTTTTGATCAAAGAGACGCCAAATCACGAGACGCTTCTGAACTATCTGCACTTTTTCATTGTCTTTCTACTGCCAAACGACCTAATCCTTCTCCATATCATCATACAGAACCGTGA

Coding sequence (CDS)

ATGGGAAATGAAACAGAAACAGAGGAGCTGGATTCAGTTGAAAAAAGAAGAACAAATAAAGCGGTTCCTTCTTTAAAAAGTTCGACTTTTGATCAAAGAGACGCCAAATCACGAGACGCTTCTGAACTATCTGCACTTTTTCATTGTCTTTCTACTGCCAAACGACCTAATCCTTCTCCATATCATCATACAGAACCGTGA

Protein sequence

MGNETETEELDSVEKRRTNKAVPSLKSSTFDQRDAKSRDASELSALFHCLSTAKRPNPSPYHHTEP*

Homology

[Close]

BLAST of CsGy6G032725 vs. NCBI nr
Match: KGN49068.1 (hypothetical protein Csa_004245 [Cucumis sativus])

HSP 1 Score: 132 bits (331), Expect = 1.36e-38
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1  MGNETETEELDSVEKRRTNKAVPSLKSSTFDQRDAKSRDASELSALFHCLSTAKRPNPSP 60
          MGNETETEELDSVEKRRTNKAVPSLKSSTFDQRDAKSRDASELSALFHCLSTAKRPNPSP
Sbjct: 1  MGNETETEELDSVEKRRTNKAVPSLKSSTFDQRDAKSRDASELSALFHCLSTAKRPNPSP 60

Query: 61 YHHTEP 66
          YHHTEP
Sbjct: 61 YHHTEP 66

[Close]

BLAST of CsGy6G032725 vs. ExPASy TrEMBL
Match: A0A0A0KHR2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511840 PE=4 SV=1)

HSP 1 Score: 132 bits (331), Expect = 6.56e-39
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0


Query: 1  MGNETETEELDSVEKRRTNKAVPSLKSSTFDQRDAKSRDASELSALFHCLSTAKRPNPSP 60
          MGNETETEELDSVEKRRTNKAVPSLKSSTFDQRDAKSRDASELSALFHCLSTAKRPNPSP
Sbjct: 1  MGNETETEELDSVEKRRTNKAVPSLKSSTFDQRDAKSRDASELSALFHCLSTAKRPNPSP 60

Query: 61 YHHTEP 66
          YHHTEP
Sbjct: 61 YHHTEP 66

The following BLAST results are available for this feature:

BLAST of CsGy6G032725 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G032725 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN49068.1	1.36e-38	100.00	hypothetical protein Csa_004245 [Cucumis sativus]	[more]

BLAST of CsGy6G032725 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHR2	6.56e-39	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511840 PE=4 SV=1	[more]

BLAST of CsGy6G032725 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G032725.1	CsGy6G032725.1	mRNA