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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGATTAAGGAAGAAGAAGAGCAGCAGAAAGGGAGTGTGAAAAAAGTGAAACGGTCTTTGGAGGAGAGAAGAGAAGGAGACGGTGGGAGGCATAAAAGAAAACGGGGATCAGAGATGGGGTCCGGGTCCCACTGCCAACCCCACCATTTTAGAAGCTCATCTTTTTCTCTCCATATAGCCGTTGGGAGAGGAGTGGGAAGGAAGAATCCGATGCAGCGTTAGTGGGGTGTGAAGTCGGGACACGTGGCTATATAAACTGCCATGTTGGCATGATGTCATTCCGGAAACGTTATGTTTGA mRNA sequence ATGATTAAGGAAGAAGAAGAGCAGCAGAAAGGGAGTGTGAAAAAAGTGAAACGGTCTTTGGAGGAGAGAAGAGAAGGAGACGGTGGGAGGCATAAAAGAAAACGGGGATCAGAGATGGGGTCCGGCCGTTGGGAGAGGAGTGGGAAGGAAGAATCCGATGCAGCGTTAGTGGGGTGTGAAGTCGGGACACGTGGCTATATAAACTGCCATGTTGGCATGATGTCATTCCGGAAACGTTATGTTTGA Coding sequence (CDS) ATGATTAAGGAAGAAGAAGAGCAGCAGAAAGGGAGTGTGAAAAAAGTGAAACGGTCTTTGGAGGAGAGAAGAGAAGGAGACGGTGGGAGGCATAAAAGAAAACGGGGATCAGAGATGGGGTCCGGCCGTTGGGAGAGGAGTGGGAAGGAAGAATCCGATGCAGCGTTAGTGGGGTGTGAAGTCGGGACACGTGGCTATATAAACTGCCATGTTGGCATGATGTCATTCCGGAAACGTTATGTTTGA Protein sequence MIKEEEEQQKGSVKKVKRSLEERREGDGGRHKRKRGSEMGSGRWERSGKEESDAALVGCEVGTRGYINCHVGMMSFRKRYV*
Homology
BLAST of CsGy6G031855 vs. NCBI nr
Match: KGN48973.1 (hypothetical protein Csa_003547 [Cucumis sativus]) HSP 1 Score: 157 bits (396), Expect = 4.68e-48 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
Query: 1 MIKEEEEQQKGSVKKVKRSLEERREGDGGRHKRKRGSEMGSGRWERSGKEESDAALVGCE 60
MIKEEEEQQKGSVKKVKRSLEERREGDGGRHKRKRGSEMGSGRWERSGKEESDAALVGCE
Sbjct: 1 MIKEEEEQQKGSVKKVKRSLEERREGDGGRHKRKRGSEMGSGRWERSGKEESDAALVGCE 60
Query: 61 VGTRGYINCHVGMMSFRKRYV 81
VGTRGYINCHVGMMSFRKRYV
Sbjct: 61 VGTRGYINCHVGMMSFRKRYV 81
BLAST of CsGy6G031855 vs. ExPASy TrEMBL
Match: A0A0A0KHF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507460 PE=4 SV=1) HSP 1 Score: 157 bits (396), Expect = 2.27e-48 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
Query: 1 MIKEEEEQQKGSVKKVKRSLEERREGDGGRHKRKRGSEMGSGRWERSGKEESDAALVGCE 60
MIKEEEEQQKGSVKKVKRSLEERREGDGGRHKRKRGSEMGSGRWERSGKEESDAALVGCE
Sbjct: 1 MIKEEEEQQKGSVKKVKRSLEERREGDGGRHKRKRGSEMGSGRWERSGKEESDAALVGCE 60
Query: 61 VGTRGYINCHVGMMSFRKRYV 81
VGTRGYINCHVGMMSFRKRYV
Sbjct: 61 VGTRGYINCHVGMMSFRKRYV 81
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
| KGN48973.1 | 4.68e-48 | 100.00 | hypothetical protein Csa_003547 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
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| A0A0A0KHF2 | 2.27e-48 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507460 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | COILS | Coil | Coil | coord: 3..23 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..53 |
Relationships
The following mRNA feature(s) are a part of this gene:
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