CsGy6G031425 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G031425
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr6: 29187003 .. 29187352 (-)
RNA-Seq ExpressionCsGy6G031425
SyntenyCsGy6G031425
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAATTATAATTCGTTTGAAAATTCTCTATTTCTCGTTCTCTGAATTAAACCACAAATCCGTAAATATTCATTAAAAAGGATTGGCGGGTCCCGTTCTTTTCAAATTCCCATCGGAGTTGGCACGGAGGCACCATCGCCGGTGGGAAACGCCTTATGGCCATTTCCTCCCTCGCCGGTGACATCAACCATTGCAACTTCTTCTTCTGATCAAAACCGGACCTCCAACAAACCCTTTATCATCTCCTATCTTCGATACTTCTCTCTCATTCAATATTGTTTGGTCAACGCAGCCATATCGAAGCAGAGTCGATTTCGTGGCTACAAGAGCACCACGAGCTTCGATTGA

mRNA sequence

ATGATAATTATAATTCGTTTGAAAATTCTCTATTTCTCGATTGGCGGGTCCCGTTCTTTTCAAATTCCCATCGGAGTTGGCACGGAGGCACCATCGCCGGTGGGAAACGCCTTATGGCCATTTCCTCCCTCGCCGGTGACATCAACCATTGCAACTTCTTCTTCTGATCAAAACCGGACCTCCAACAAACCCTTTATCATCTCCTATCTTCGATACTTCTCTCTCATTCAATATTGTTTGGTCAACGCAGCCATATCGAAGCAGAGTCGATTTCGTGGCTACAAGAGCACCACGAGCTTCGATTGA

Coding sequence (CDS)

ATGATAATTATAATTCGTTTGAAAATTCTCTATTTCTCGATTGGCGGGTCCCGTTCTTTTCAAATTCCCATCGGAGTTGGCACGGAGGCACCATCGCCGGTGGGAAACGCCTTATGGCCATTTCCTCCCTCGCCGGTGACATCAACCATTGCAACTTCTTCTTCTGATCAAAACCGGACCTCCAACAAACCCTTTATCATCTCCTATCTTCGATACTTCTCTCTCATTCAATATTGTTTGGTCAACGCAGCCATATCGAAGCAGAGTCGATTTCGTGGCTACAAGAGCACCACGAGCTTCGATTGA

Protein sequence

MIIIIRLKILYFSIGGSRSFQIPIGVGTEAPSPVGNALWPFPPSPVTSTIATSSSDQNRTSNKPFIISYLRYFSLIQYCLVNAAISKQSRFRGYKSTTSFD*
Homology
[Close]
BLAST of CsGy6G031425 vs. NCBI nr
Match: KAE8647609.1 (hypothetical protein Csa_023543, partial [Cucumis sativus])

HSP 1 Score: 177 bits (450), Expect = 7.61e-56
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 14  IGGSRSFQIPIGVGTEAPSPVGNALWPFPPSPVTSTIATSSSDQNRTSNKPFIISYLRYF 73
           IGGSRSFQIPIGVGTEAPSPVGNALWPFPPSPVTSTIATSSSDQNRTSNKPFIISYLRYF
Sbjct: 1   IGGSRSFQIPIGVGTEAPSPVGNALWPFPPSPVTSTIATSSSDQNRTSNKPFIISYLRYF 60

Query: 74  SLIQYCLVNAAISKQSRFRGYKSTTSFD 101
           SLIQYCLVNAAISKQSRFRGYKSTTSFD
Sbjct: 61  SLIQYCLVNAAISKQSRFRGYKSTTSFD 88

The following BLAST results are available for this feature:
BLAST of CsGy6G031425 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G031425 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647609.17.61e-56100.00hypothetical protein Csa_023543, partial [Cucumis sativus][more]
BLAST of CsGy6G031425 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsGy6G031425 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 80..101
score: 6.6868

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G031425.1CsGy6G031425.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding