CsGy6G031200 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G031200
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Zinc finger protein
Location	Gy14Chr6: 29054341 .. 29058018 (+)
RNA-Seq Expression	CsGy6G031200
Synteny	CsGy6G031200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTATAGTCAATAATTATAAATTTACTACATAGTCCTAAATTCCTAACACCTAAAATAGTCTAAAGTTAATGCCGAGGGCTCACTGGTAGTGCCGTAAAAGGCCATCGAAGCCGAAGCCCACGAAAATCCCGCGGGCAAGCTTAGCCCACACAGAGAAAAAGAAGAACCGCCGTGGTTGGTGTGTTGCTGGAGGCGGAAATTTTCGCCTTCTCCTCTCCTCTTCCCTTCGAGTACAGTGGTTGTTTTTTGACCATCAGTTGAACTAATATTTTGAGCAATGGATGGAGGGAAGGAGGGGATAGAAGGAAAAGCATCGTTACAACTGGCAATGGGCGAAGGTAAAGAAGGCGATTGGGAGTGCAGTGGATGCAAGAATAGGAACTATGCTTTTCGATCCTTCTGTAATAGATGCAAACAACCTCGCCTTCTTGTCGACAATAAAACGCCTCCAGACTCCAAATGGCTTCCTCGAATCGGTGATTGGATCTGCACGGGTTAGCTTCCTATATTAACTGTACTTGTTTTTTCCCCGTTTCTTTATGCAACCTGCAAACTGTGTTGTATTCCCGACTTCGTTTTGTTGGTTTTCATAGCTGAACTTAGAATTAAACGTTTAGTTCAGAATTTTAGAGTAGCATAATTCGATTCTGTGTCTGACACTTGGTGTGGGTATTTTGTTTGAAGAATGTTCACGTGATGGAGTTTTGTTGGAACGTTTCTCTTTTCTAACATCTGAGTAGGAGTGGAGTTATCGAGTTAGGCTTATGGCTCTTACTCCAGTGAGGTTTCTTGCTTTGATAGTTTTCCACCTAAATACAATGAGCTAATAATTATTGAACATTTCCAATTTAAATCGACTAAAACTGTAGGGTGTGGTGAAGGAAAATCCCCATTGATGTGATCAGTAAATAAAATACTAATCAAGATAGCCTTAAACATCCTGTGGAATAAAATACTCATTTACTGCCAATTCAGAAAATCTGTAGTTGGAGTTGGTATACTTTACACAGCCATGTGTTATACTATGAAGAGTGAAATTGTTTTGATCTTTGGTTTGCCTGTCACTGGACTTAAATCAAAGGAATCTTCATTGCATATCTACCTCCAGTTCAAAATTTTCTTTGAGGATTGTTTTCTGCTTGCTCTTTCCATTAATGTTTATATTCCAGCGAACTCATGCTTTTAGAAAAATTCTAAACTAGGTTGAGTCATGAGTCGTTTGTGTTTTTTGTATGTGTATATGGTGTGGATGGACTGCTTGGTGTGCGTATACCTGGTTTTCTTGTGGGTTGGGTTTGTCTGGCTGTGGTGCAATAGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAAAAGTGTGGACAACCAAAGGAGGTAGCAGCAATGCCAGCACTTGCAATCCCTGGAGCTTCTTTTCCAACTTATTCACACTATTTTGCCAGGACCCAGGGAGGATTGGATTCAAAGATGAATCTTGGATTAATTGGAAATGGCACTTCACAGCATCTGCATCCCTTGAGCTCTAACTGGTCCCTGGGAGGTGCTGATAAGTATGGAATTCATGCAGCTCCAACATTTCCTTTGGGTGGAAATAATTCTGCAATCTCGTATATGAGTTTAGCTAATCAGCTCCTTTCGGTTCCAAAGGGCTGGCGGAATGGCGACTGGTTATGCAACTGTGGTTTTCATAATTATTCTTCACGTGCACAGGTGGGGTTTCCACCTTTACATACTGAGAGTTGTTTTGTACTTTTCCTATTGGTGTTTGTGGTTTCTCATTTCTGTTTACACCTGTTGTTTATCTAATTGAGCTTTGTCATATTTGCAGTGCAAGAAGTGCAATGCTTCACCACAAGGTACTTGTCCTTTCTCTTTGGTCTCTAGGTTTTGAATGGTCATTCTAGGATTTTAGCTTTAAGAGAGCACGAGGGACTATTTTAAAGTCTATGTAAGTAATAATGAAAAGGCATTGGACCTATGGCGTGTCTTGTGAGAAAGATGTTTATATTGTTTAAGCAATCCTATTTATATTCTTTGTTGTTAGTTGAATGAGTAGATTCATAGTCCAGAGTTTGTAGTAATGTCTCATAGGAGGAAATGTTGGTGGAATGGAAAAACTTAGTTGGCCTAAGGAGAGGTTGTTCTAATATCCTTGTACAAGGTGTTTCAGCTGAGAAAAATAGAGTAGGTAGTGGAGATAAAAGTTTATTGGAATTCTAATTCTGAATGAATTTGACTTCCCCTGAGGGACATTAGACTCACCTATCTTTCTTTCCTCTTCCTCTTTTTATGTATATATTTTTTGTTTGGATTATGCAGCACTTGGAATGAAACGGTTAGCATCCGAAGAACTTGTTCATCAGTGGGATAACAAGAGATTGAATATTGGACAGGTATTCCCTATGCTCAGGAGAAAAAGGATGATAATATTTTTTCGTATTTAAAGAAAATTTTCTGTTAAAATTTGGTAACTCTGATCAATGGCTTCTTCCCGTTCTTTTCTTGGCATTCAGGCAAATGAGCAACAACAATCTTACCCAGGTTTTGAGCAGATGATGGGCGCTGGTAGTGACCCAAACGTAGGATTATATAATTCTTATCCCCATGAAAGTTCTAGTGTAGCTCCAAATTTGGAAATGCCAATGCAGTTTCCTCCACAAGCAACTGCACCGACGCTCCTAGGGAAAGGGTAATATGCATTTGCTAGCCGTATTTCATTTTCTTGGCGATCGAAACAATGAGATATTCAAACCCTTTTCTTTCTGACCAAAATCGGTACCAAGACTACTGAAGTGATGAATAATAATTTATAATGCTTGACATTACCCAATATTTTAGTACCATAGAACAACTTGTTTTTTGGTTGACTATGAACTCTTCACTGATTGAGACAATTCATTCCTATCCTAACCTTATGAATCTGCAGAGCAAAGCAATGGCGCAACGGAGATTGGATGTGCACAAATTGCAATAATCATAATTATGCATCTCGCTTACACTGTAACAGGTTATCACCTAAACTAATATATTATCTGGTTGATCTTTTAACCTTTAGATCTTATAATTCAGTTGCGCCACAAGTTCTTACGTGGAAAATGGCTGATTTGTATGTTCTTCTGGTTGCTAACTTAGTAGGTTTATTGGATGTTAAATGGAGTTTGGCAGCTCGCATTGCATTTATATTGCAGGTCCATTATTGAAATGCTTTTTTGTAACAGGTGCAAGACTCAAAGAGATTCACTTTCTCTGCCCCTCAGTGCCATCTAAGAACAATTTTTCTACAGACTTGGGATGGTTTTTGTTCCTATGCTGCAAGTTTCTTTCAACCAAATTTTTGGATCTCATAATCAACTCTTCTAGTCTCCAAGGTATATTGATTGATTGTCAGTTTTCCATTACTTAGGGAAGGAGGTTTTGATGTGAATGACATTACTATTTTTGTTGAACAGTTGAGAATTTTAGTGTTGAAGCATTTATATATAATAATAATAAGATATATATATATATATATTTTCAGTTTTTCATATTAAATTTATCACCTTCTTGTCTCAGACGGTTGGAATAGTGGGGATTAAGTGTAAAAATAAGGCTACCAGCATGAAAACGAGCTGCAGTGTGTAATACCAAGCTTGGATTTTTCAAAGTTACTAAGTTTCATCTTTCTTTCACTGAG

mRNA sequence

GTATAGTCAATAATTATAAATTTACTACATAGTCCTAAATTCCTAACACCTAAAATAGTCTAAAGTTAATGCCGAGGGCTCACTGGTAGTGCCGTAAAAGGCCATCGAAGCCGAAGCCCACGAAAATCCCGCGGGCAAGCTTAGCCCACACAGAGAAAAAGAAGAACCGCCGTGGTTGGTGTGTTGCTGGAGGCGGAAATTTTCGCCTTCTCCTCTCCTCTTCCCTTCGAGTACAGTGGTTGTTTTTTGACCATCAGTTGAACTAATATTTTGAGCAATGGATGGAGGGAAGGAGGGGATAGAAGGAAAAGCATCGTTACAACTGGCAATGGGCGAAGGTAAAGAAGGCGATTGGGAGTGCAGTGGATGCAAGAATAGGAACTATGCTTTTCGATCCTTCTGTAATAGATGCAAACAACCTCGCCTTCTTGTCGACAATAAAACGCCTCCAGACTCCAAATGGCTTCCTCGAATCGGTGATTGGATCTGCACGGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAAAAGTGTGGACAACCAAAGGAGGTAGCAGCAATGCCAGCACTTGCAATCCCTGGAGCTTCTTTTCCAACTTATTCACACTATTTTGCCAGGACCCAGGGAGGATTGGATTCAAAGATGAATCTTGGATTAATTGGAAATGGCACTTCACAGCATCTGCATCCCTTGAGCTCTAACTGGTCCCTGGGAGGTGCTGATAAGTATGGAATTCATGCAGCTCCAACATTTCCTTTGGGTGGAAATAATTCTGCAATCTCGTATATGAGTTTAGCTAATCAGCTCCTTTCGGTTCCAAAGGGCTGGCGGAATGGCGACTGGTTATGCAACTGTGGTTTTCATAATTATTCTTCACGTGCACAGTGCAAGAAGTGCAATGCTTCACCACAAGCACTTGGAATGAAACGGTTAGCATCCGAAGAACTTGTTCATCAGTGGGATAACAAGAGATTGAATATTGGACAGGCAAATGAGCAACAACAATCTTACCCAGGTTTTGAGCAGATGATGGGCGCTGGTAGTGACCCAAACGTAGGATTATATAATTCTTATCCCCATGAAAGTTCTAGTGTAGCTCCAAATTTGGAAATGCCAATGCAGTTTCCTCCACAAGCAACTGCACCGACGCTCCTAGGGAAAGGAGCAAAGCAATGGCGCAACGGAGATTGGATGTGCACAAATTGCAATAATCATAATTATGCATCTCGCTTACACTGTAACAGGTTATCACCTAAACTAATATATTATCTGGTTGATCTTTTAACCTTTAGATCTTATAATTCAGTTGCGCCACAAGTTCTTACGTGGAAAATGGCTGATTTGTATGTTCTTCTGGTTGCTAACTTAGTAGGTTTATTGGATGTTAAATGGAGTTTGGCAGCTCGCATTGCATTTATATTGCAGGTCCATTATTGAAATGCTTTTTTGTAACAGGTGCAAGACTCAAAGAGATTCACTTTCTCTGCCCCTCAGTGCCATCTAAGAACAATTTTTCTACAGACTTGGGATGGTTTTTGTTCCTATGCTGCAAGTTTCTTTCAACCAAATTTTTGGATCTCATAATCAACTCTTCTAGTCTCCAAGGTATATTGATTGATTGTCAGTTTTCCATTACTTAGGGAAGGAGGTTTTGATGTGAATGACATTACTATTTTTGTTGAACAGTTGAGAATTTTAGTGTTGAAGCATTTATATATAATAATAATAAGATATATATATATATATATTTTCAGTTTTTCATATTAAATTTATCACCTTCTTGTCTCAGACGGTTGGAATAGTGGGGATTAAGTGTAAAAATAAGGCTACCAGCATGAAAACGAGCTGCAGTGTGTAATACCAAGCTTGGATTTTTCAAAGTTACTAAGTTTCATCTTTCTTTCACTGAG

Coding sequence (CDS)

ATGGATGGAGGGAAGGAGGGGATAGAAGGAAAAGCATCGTTACAACTGGCAATGGGCGAAGGTAAAGAAGGCGATTGGGAGTGCAGTGGATGCAAGAATAGGAACTATGCTTTTCGATCCTTCTGTAATAGATGCAAACAACCTCGCCTTCTTGTCGACAATAAAACGCCTCCAGACTCCAAATGGCTTCCTCGAATCGGTGATTGGATCTGCACGGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAAAAGTGTGGACAACCAAAGGAGGTAGCAGCAATGCCAGCACTTGCAATCCCTGGAGCTTCTTTTCCAACTTATTCACACTATTTTGCCAGGACCCAGGGAGGATTGGATTCAAAGATGAATCTTGGATTAATTGGAAATGGCACTTCACAGCATCTGCATCCCTTGAGCTCTAACTGGTCCCTGGGAGGTGCTGATAAGTATGGAATTCATGCAGCTCCAACATTTCCTTTGGGTGGAAATAATTCTGCAATCTCGTATATGAGTTTAGCTAATCAGCTCCTTTCGGTTCCAAAGGGCTGGCGGAATGGCGACTGGTTATGCAACTGTGGTTTTCATAATTATTCTTCACGTGCACAGTGCAAGAAGTGCAATGCTTCACCACAAGCACTTGGAATGAAACGGTTAGCATCCGAAGAACTTGTTCATCAGTGGGATAACAAGAGATTGAATATTGGACAGGCAAATGAGCAACAACAATCTTACCCAGGTTTTGAGCAGATGATGGGCGCTGGTAGTGACCCAAACGTAGGATTATATAATTCTTATCCCCATGAAAGTTCTAGTGTAGCTCCAAATTTGGAAATGCCAATGCAGTTTCCTCCACAAGCAACTGCACCGACGCTCCTAGGGAAAGGAGCAAAGCAATGGCGCAACGGAGATTGGATGTGCACAAATTGCAATAATCATAATTATGCATCTCGCTTACACTGTAACAGGTTATCACCTAAACTAATATATTATCTGGTTGATCTTTTAACCTTTAGATCTTATAATTCAGTTGCGCCACAAGTTCTTACGTGGAAAATGGCTGATTTGTATGTTCTTCTGGTTGCTAACTTAGTAGGTTTATTGGATGTTAAATGGAGTTTGGCAGCTCGCATTGCATTTATATTGCAGGTCCATTATTGA

Protein sequence

MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDSKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGGLDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQANEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAKQWRNGDWMCTNCNNHNYASRLHCNRLSPKLIYYLVDLLTFRSYNSVAPQVLTWKMADLYVLLVANLVGLLDVKWSLAARIAFILQVHY*

Homology

[Close]

BLAST of CsGy6G031200 vs. ExPASy Swiss-Prot
Match: O13801 (Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17H9.04c PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.2e-06
Identity = 39/149 (26.17%), Postives = 59/149 (39.60%), Query Frame = 0


Query: 65  RIGDWIC--TGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGGLD 124
           R GDW C   GC  +N+A    C +CG  +  AA+ A    G    +YSH    +   + 
Sbjct: 445 RAGDWKCGSEGCGYHNFAKNVCCLRCGASRATAAVVADHASGPVNGSYSH---NSYSHIP 504

Query: 125 SKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQLLSV 184
             M+     +    +     ++ +      +G         GGN S         ++   
Sbjct: 505 PVMSTSPPNHSVYPYSQLSINSVTANHGQNFGGQN------GGNVSRFDDHGRFKEVSRP 564

Query: 185 PKGWRNGDWLCNCGFHNYSSRAQCKKCNA 212
                 GDWLC CGF N+  R+ C +CNA
Sbjct: 565 SVTTDQGDWLCECGFTNFRRRSNCLRCNA 584

[Close]

BLAST of CsGy6G031200 vs. ExPASy Swiss-Prot
Match: O95218 (Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ZRANB2 PE=1 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 1.0e-05
Identity = 27/83 (32.53%), Postives = 37/83 (44.58%), Query Frame = 0


Query: 23 EGDWEC--SGCKNRNYAFRSFCNRCKQPRLL-----------VDNKTPPDSKWLPRIGDW 82
          +GDW C    C N N+A R+ CNRC + +             +       S+ L    DW
Sbjct: 10 DGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDW 69

Query: 83 ICTGCTNNNYASREKCKKCGQPK 93
           C  C+N N+A R +C  C  PK
Sbjct: 70 QCKTCSNVNWARRSECNMCNTPK 92

[Close]

BLAST of CsGy6G031200 vs. ExPASy Swiss-Prot
Match: Q9R020 (Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=Zranb2 PE=1 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 1.0e-05
Identity = 27/83 (32.53%), Postives = 37/83 (44.58%), Query Frame = 0


Query: 23 EGDWEC--SGCKNRNYAFRSFCNRCKQPRLL-----------VDNKTPPDSKWLPRIGDW 82
          +GDW C    C N N+A R+ CNRC + +             +       S+ L    DW
Sbjct: 10 DGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDW 69

Query: 83 ICTGCTNNNYASREKCKKCGQPK 93
           C  C+N N+A R +C  C  PK
Sbjct: 70 QCKTCSNVNWARRSECNMCNTPK 92

[Close]

BLAST of CsGy6G031200 vs. ExPASy Swiss-Prot
Match: Q19QU3 (Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.0e-05
Identity = 27/83 (32.53%), Postives = 37/83 (44.58%), Query Frame = 0


Query: 23 EGDWEC--SGCKNRNYAFRSFCNRCKQPRLL-----------VDNKTPPDSKWLPRIGDW 82
          +GDW C    C N N+A R+ CNRC + +             +       S+ L    DW
Sbjct: 10 DGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDW 69

Query: 83 ICTGCTNNNYASREKCKKCGQPK 93
           C  C+N N+A R +C  C  PK
Sbjct: 70 QCKTCSNVNWARRSECNMCNTPK 92

[Close]

BLAST of CsGy6G031200 vs. ExPASy Swiss-Prot
Match: Q5R580 (Zinc finger Ran-binding domain-containing protein 2 OS=Pongo abelii OX=9601 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.0e-05
Identity = 27/83 (32.53%), Postives = 37/83 (44.58%), Query Frame = 0


Query: 23 EGDWEC--SGCKNRNYAFRSFCNRCKQPRLL-----------VDNKTPPDSKWLPRIGDW 82
          +GDW C    C N N+A R+ CNRC + +             +       S+ L    DW
Sbjct: 10 DGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDW 69

Query: 83 ICTGCTNNNYASREKCKKCGQPK 93
           C  C+N N+A R +C  C  PK
Sbjct: 70 QCKTCSNVNWARRSECNMCNTPK 92

[Close]

BLAST of CsGy6G031200 vs. NCBI nr
Match: XP_004134868.1 (uncharacterized RNA-binding protein C17H9.04c [Cucumis sativus] >KGN48905.1 hypothetical protein Csa_003493 [Cucumis sativus])

HSP 1 Score: 697 bits (1799), Expect = 1.35e-252
Identity = 324/325 (99.69%), Postives = 324/325 (99.69%), Query Frame = 0


Query: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120

Query: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180
           LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPL GNNSAISYMSLANQLL
Sbjct: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLL 180

Query: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240
           SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300
           NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK
Sbjct: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLHCNR 325
           QWRNGDWMCTNCNNHNYASRLHCNR
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLHCNR 325

[Close]

BLAST of CsGy6G031200 vs. NCBI nr
Match: KAA0025683.1 (putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa] >TYK12558.1 putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa])

HSP 1 Score: 697 bits (1798), Expect = 5.48e-252
Identity = 332/368 (90.22%), Postives = 335/368 (91.03%), Query Frame = 0


Query: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGKAS QLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASSQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120

Query: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180
           LDSKMNLGLIGNGTSQHLHPLSSNWS+GGADKYGIHAAPTFPLGGNNSAISYMSLANQLL
Sbjct: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSMGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180

Query: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240
           SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300
           NEQQQSYPG EQMMG  SDPNVGLYN YPHESSSVAPNLEMP+QFPPQATAPTLLGKGAK
Sbjct: 241 NEQQQSYPGLEQMMGTSSDPNVGLYNPYPHESSSVAPNLEMPIQFPPQATAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLHCNRLSPKLIYYLVDLLTFRSYNSVAPQVLTWKMADLYV 360
           QWRNGDWMCTNCNNHNYASRLHCN  +    Y                  L  KMADLYV
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLHCNSCATSSYY------------------LARKMADLYV 350

Query: 361 LLVANLVG 368
           LL A LVG
Sbjct: 361 LLAATLVG 350

[Close]

BLAST of CsGy6G031200 vs. NCBI nr
Match: XP_008440810.1 (PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo])

HSP 1 Score: 687 bits (1772), Expect = 1.75e-248
Identity = 318/325 (97.85%), Postives = 320/325 (98.46%), Query Frame = 0


Query: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGKAS QLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASSQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120

Query: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180
           LDSKMNLGLIGNGTSQHLHPLSSNWS+GGADKYGIHAAPTFPLGGNNSAISYMSLANQLL
Sbjct: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSMGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180

Query: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240
           SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300
           NEQQQSYPG EQMMG  SDPNVGLYN YPHESSSVAPNLEMP+QFPPQATAPTLLGKGAK
Sbjct: 241 NEQQQSYPGLEQMMGTSSDPNVGLYNPYPHESSSVAPNLEMPIQFPPQATAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLHCNR 325
           QWRNGDWMCTNCNNHNYASRLHCNR
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLHCNR 325

[Close]

BLAST of CsGy6G031200 vs. NCBI nr
Match: XP_038883349.1 (uncharacterized RNA-binding protein C17H9.04c [Benincasa hispida])

HSP 1 Score: 678 bits (1749), Expect = 5.61e-245
Identity = 312/325 (96.00%), Postives = 318/325 (97.85%), Query Frame = 0


Query: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGKA+ Q  MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKAASQQTMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKE+AAMPA+AIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIPGASFPTYSHYFARTQGG 120

Query: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180
           LDSK+NLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL
Sbjct: 121 LDSKINLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180

Query: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240
           SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WDNKRLNIGQA
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHHWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300
           NEQQQSYPGFEQMMG+ SDPNVGLYNSYPHESS+VAPNLEMPMQFPPQATAP LLGKGAK
Sbjct: 241 NEQQQSYPGFEQMMGSSSDPNVGLYNSYPHESSNVAPNLEMPMQFPPQATAPALLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLHCNR 325
           QWRNGDWMCTNCNNHNYASRL CNR
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLQCNR 325

[Close]

BLAST of CsGy6G031200 vs. NCBI nr
Match: XP_022132998.1 (uncharacterized RNA-binding protein C17H9.04c [Momordica charantia])

HSP 1 Score: 633 bits (1632), Expect = 3.77e-227
Identity = 292/325 (89.85%), Postives = 304/325 (93.54%), Query Frame = 0


Query: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEG+E KASLQ+AM EGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPA+AIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGG 120

Query: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180
           L++KMNLGLIGNGTSQ  HPLSSNW LGG DKYGIHAA TFPLGGNNSAISYMS  NQ+L
Sbjct: 121 LNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQIL 180

Query: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240
            VPKGWRNGDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WD+KRLNIGQ 
Sbjct: 181 LVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQT 240

Query: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300
           NEQQQSYPGFEQ++ + SD NVGLYNSY HESS VAPNLEM M FP Q+TAPTLLGKGAK
Sbjct: 241 NEQQQSYPGFEQIVSSSSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLHCNR 325
           QWRNGDWMCTNCNNHNYASRL CNR
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLQCNR 325

[Close]

BLAST of CsGy6G031200 vs. ExPASy TrEMBL
Match: A0A0A0KGM9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505830 PE=4 SV=1)

HSP 1 Score: 697 bits (1799), Expect = 6.52e-253
Identity = 324/325 (99.69%), Postives = 324/325 (99.69%), Query Frame = 0


Query: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120

Query: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180
           LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPL GNNSAISYMSLANQLL
Sbjct: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLSGNNSAISYMSLANQLL 180

Query: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240
           SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300
           NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK
Sbjct: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLHCNR 325
           QWRNGDWMCTNCNNHNYASRLHCNR
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLHCNR 325

[Close]

BLAST of CsGy6G031200 vs. ExPASy TrEMBL
Match: A0A5A7SLZ2 (Putative RNA-binding protein C17H9.04c OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001400 PE=4 SV=1)

HSP 1 Score: 697 bits (1798), Expect = 2.65e-252
Identity = 332/368 (90.22%), Postives = 335/368 (91.03%), Query Frame = 0


Query: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGKAS QLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASSQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120

Query: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180
           LDSKMNLGLIGNGTSQHLHPLSSNWS+GGADKYGIHAAPTFPLGGNNSAISYMSLANQLL
Sbjct: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSMGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180

Query: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240
           SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300
           NEQQQSYPG EQMMG  SDPNVGLYN YPHESSSVAPNLEMP+QFPPQATAPTLLGKGAK
Sbjct: 241 NEQQQSYPGLEQMMGTSSDPNVGLYNPYPHESSSVAPNLEMPIQFPPQATAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLHCNRLSPKLIYYLVDLLTFRSYNSVAPQVLTWKMADLYV 360
           QWRNGDWMCTNCNNHNYASRLHCN  +    Y                  L  KMADLYV
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLHCNSCATSSYY------------------LARKMADLYV 350

Query: 361 LLVANLVG 368
           LL A LVG
Sbjct: 361 LLAATLVG 350

[Close]

BLAST of CsGy6G031200 vs. ExPASy TrEMBL
Match: A0A1S3B1J3 (uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC103485118 PE=4 SV=1)

HSP 1 Score: 687 bits (1772), Expect = 8.49e-249
Identity = 318/325 (97.85%), Postives = 320/325 (98.46%), Query Frame = 0


Query: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEGIEGKAS QLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGIEGKASSQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120

Query: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180
           LDSKMNLGLIGNGTSQHLHPLSSNWS+GGADKYGIHAAPTFPLGGNNSAISYMSLANQLL
Sbjct: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSMGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180

Query: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240
           SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA
Sbjct: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240

Query: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300
           NEQQQSYPG EQMMG  SDPNVGLYN YPHESSSVAPNLEMP+QFPPQATAPTLLGKGAK
Sbjct: 241 NEQQQSYPGLEQMMGTSSDPNVGLYNPYPHESSSVAPNLEMPIQFPPQATAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLHCNR 325
           QWRNGDWMCTNCNNHNYASRLHCNR
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLHCNR 325

[Close]

BLAST of CsGy6G031200 vs. ExPASy TrEMBL
Match: A0A6J1BXT0 (uncharacterized RNA-binding protein C17H9.04c OS=Momordica charantia OX=3673 GN=LOC111005702 PE=4 SV=1)

HSP 1 Score: 633 bits (1632), Expect = 1.82e-227
Identity = 292/325 (89.85%), Postives = 304/325 (93.54%), Query Frame = 0


Query: 1   MDGGKEGIEGKASLQLAMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60
           MDGGKEG+E KASLQ+AM EGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS
Sbjct: 1   MDGGKEGMEAKASLQVAMAEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDS 60

Query: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 120
           KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPA+AIPGASFPTYSHYFARTQGG
Sbjct: 61  KWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAIPGASFPTYSHYFARTQGG 120

Query: 121 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQLL 180
           L++KMNLGLIGNGTSQ  HPLSSNW LGG DKYGIHAA TFPLGGNNSAISYMS  NQ+L
Sbjct: 121 LNTKMNLGLIGNGTSQQPHPLSSNWPLGGVDKYGIHAAQTFPLGGNNSAISYMSSTNQIL 180

Query: 181 SVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQA 240
            VPKGWRNGDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVH WD+KRLNIGQ 
Sbjct: 181 LVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHPWDSKRLNIGQT 240

Query: 241 NEQQQSYPGFEQMMGAGSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAK 300
           NEQQQSYPGFEQ++ + SD NVGLYNSY HESS VAPNLEM M FP Q+TAPTLLGKGAK
Sbjct: 241 NEQQQSYPGFEQIVSSSSDLNVGLYNSYSHESSGVAPNLEMVMNFPQQSTAPTLLGKGAK 300

Query: 301 QWRNGDWMCTNCNNHNYASRLHCNR 325
           QWRNGDWMCTNCNNHNYASRL CNR
Sbjct: 301 QWRNGDWMCTNCNNHNYASRLQCNR 325

[Close]

BLAST of CsGy6G031200 vs. ExPASy TrEMBL
Match: A0A6J1EFP4 (uncharacterized RNA-binding protein C17H9.04c OS=Cucurbita moschata OX=3662 GN=LOC111433894 PE=4 SV=1)

HSP 1 Score: 628 bits (1620), Expect = 1.27e-225
Identity = 295/327 (90.21%), Postives = 307/327 (93.88%), Query Frame = 0


Query: 1   MDGGKEGIEGKASLQLA-MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60
           MDG KEGIE KA+ Q+A MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD
Sbjct: 1   MDGVKEGIERKAASQVAVMGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPD 60

Query: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQG 120
           SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKE+AAMPA+AI GASFPTYSHYFARTQG
Sbjct: 61  SKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEIAAMPAIAIHGASFPTYSHYFARTQG 120

Query: 121 GLDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQL 180
           GLD+KMNLGL  NG  Q LHPLSSNWSLGGADKY IHA+P FPLGGNNSAISYMS  NQ+
Sbjct: 121 GLDTKMNLGLR-NGPLQQLHPLSSNWSLGGADKYEIHASPAFPLGGNNSAISYMSSPNQI 180

Query: 181 LSVPKGWRNGDWLCNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ 240
           LSVPKGWRNGDW+CNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ
Sbjct: 181 LSVPKGWRNGDWICNCGFHNYSSRAQCKKCNASPQALGMKRLASEELVHQWDNKRLNIGQ 240

Query: 241 ANEQQQSYPGFEQMMGAGSDPNVGL-YNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKG 300
            NEQQQS+PGFEQM+G+ SDPNVGL YNSYPHESS +APNLEMPMQFP QATAPTLLGKG
Sbjct: 241 TNEQQQSFPGFEQMVGSSSDPNVGLLYNSYPHESSGIAPNLEMPMQFPQQATAPTLLGKG 300

Query: 301 AKQWRNGDWMCTNCNNHNYASRLHCNR 325
           AKQWRNGDWMCTNCNNHNYASRL CNR
Sbjct: 301 AKQWRNGDWMCTNCNNHNYASRLQCNR 326

[Close]

BLAST of CsGy6G031200 vs. TAIR 10
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 339.7 bits (870), Expect = 3.0e-93
Identity = 169/309 (54.69%), Postives = 194/309 (62.78%), Query Frame = 0


Query: 18  MGEGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDSKWLPRIGDWICTGCTNN 77
           MG+G+EGDWEC GC+NRNYAFRSFCNRCKQPRL++DN T P+SKWLPRIGDWICTGCTNN
Sbjct: 1   MGDGREGDWECLGCRNRNYAFRSFCNRCKQPRLIMDNNTSPNSKWLPRIGDWICTGCTNN 60

Query: 78  NYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGGLDSKMNLGLIGNGTSQH 137
           NYASREKCKKCGQ KEVAA+ ALAIPGAS  T+ HYF R                G   H
Sbjct: 61  NYASREKCKKCGQSKEVAALSALAIPGASLQTHLHYFTR----------------GPESH 120

Query: 138 LHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQLLSVPKGWRNGDWLCNCGF 197
             P                           S +++ +  NQ  SV K WR+GDW+C CGF
Sbjct: 121 DQP--------------------------GSLLAFSNATNQ-ASVHKEWRSGDWICRCGF 180

Query: 198 HNYSSRAQCKKCN-ASPQALGMKRLASEELVHQWDNKRLNIGQANEQQQSYPGFEQMMGA 257
           HNYSSR QCKKCN  +P ALG KRLASE L H+WD+KRLN G  + Q QS          
Sbjct: 181 HNYSSRIQCKKCNEIAPLALGTKRLASEALAHEWDSKRLNQGYTSMQTQS---------- 240

Query: 258 GSDPNVGLYNSYPHESSSVAPNLEMPMQFPPQATAPTLLGKGAKQWRNGDWMCTNCNNHN 317
                  +Y S+P  S     N ++P+ F  Q + P LLG G KQWR+GDWMCTNC NHN
Sbjct: 241 ------AIYASFPGMSLGRVSNWQLPLPFLQQHSTPALLGMGVKQWRDGDWMCTNCKNHN 250

Query: 318 YASRLHCNR 326
           YASR  CNR
Sbjct: 301 YASRAECNR 250

[Close]

BLAST of CsGy6G031200 vs. TAIR 10
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 71.2 bits (173), Expect = 2.0e-12
Identity = 61/222 (27.48%), Postives = 86/222 (38.74%), Query Frame = 0


Query: 22  KEGDWECSGCKNRNYAFRSFCNRCKQPR-------LLVDNKTPPDSKWL-------PRIG 81
           + GDW C  C + N+  R  C RC++PR       LL      P S           R G
Sbjct: 3   RPGDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGFGGRPVSSSFGFNTGPDVRPG 62

Query: 82  DWICT--GCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGGLDSKM 141
           DW C    C  +N+A+R  C KCG  K+  +  +               A T G +D  M
Sbjct: 63  DWYCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSA--------------AATTGFMD--M 122

Query: 142 NLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQLLSVPKG 201
           N+G           P    +  GG+   G         GG   +                
Sbjct: 123 NVG-----------PRRGLFGFGGSSSGG---------GGTGRS---------------P 167

Query: 202 WRNGDWLC---NCGFHNYSSRAQCKKCNASPQALGMKRLASE 225
           W++GDW+C    C  HN++SR++C +CNA       K LA+E
Sbjct: 183 WKSGDWICPRSGCNEHNFASRSECFRCNAP------KELATE 167

[Close]

BLAST of CsGy6G031200 vs. TAIR 10
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 4.5e-12
Identity = 42/149 (28.19%), Postives = 60/149 (40.27%), Query Frame = 0


Query: 67  GDWICTGCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGGLDSKMN 126
           GDW+C  C + N+  RE C+KCG PK           G    TY +       G      
Sbjct: 6   GDWLCGACQHANFKKRESCQKCGYPK---------FGGVDVSTYLYNRTEVMAG---DWY 65

Query: 127 LGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPTFPLGGNNSAISYMSLANQLLSVPKGW 186
            G +  G+    H  +S  S        +     +           ++  N   + P GW
Sbjct: 66  CGALNCGS----HNYASRTSCYRCGMIKVEYTEQY------YGAQMVAYGNDGAACPPGW 125

Query: 187 RNGDWLC---NCGFHNYSSRAQCKKCNAS 213
           + GDW+C    CG HNY+SRA+C KC  +
Sbjct: 126 KTGDWVCPRVGCGVHNYASRAECFKCKTT 132

[Close]

BLAST of CsGy6G031200 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-07
Identity = 25/69 (36.23%), Postives = 32/69 (46.38%), Query Frame = 0


Query: 20  EGKEGDWECSGCKNRNYAFRSFCNRCKQPRLLVDNKTPPDSKWLPRIGDWICTGCTNNNY 79
           E K+GDW C+GC   N+A    C  C++ R           K L   GDW C  C   N+
Sbjct: 374 EMKKGDWNCTGCGYMNFASNKQCRECREQR----------HKTLAEPGDWECPSCDFVNF 432

Query: 80  ASREKCKKC 89
              + CKKC
Sbjct: 434 RRNDACKKC 432

[Close]

BLAST of CsGy6G031200 vs. TAIR 10
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 53.5 bits (127), Expect = 4.3e-07
Identity = 53/215 (24.65%), Postives = 70/215 (32.56%), Query Frame = 0


Query: 22  KEGDWECSGCKNRNYAFRSFCNRCKQPR--------LLVDN-----------KTPPDSKW 81
           + GDW C  C + N+  R  C RC   R        L   N            T  D   
Sbjct: 3   RPGDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGRAMSAFGFTTGSD--- 62

Query: 82  LPRIGDWICT--GCTNNNYASREKCKKCGQPKEVAAMPALAIPGASFPTYSHYFARTQGG 141
             R GDW CT   C  +N+ASR  C KCG  K+                           
Sbjct: 63  -VRPGDWYCTVGNCGTHNFASRSTCFKCGTFKD--------------------------- 122

Query: 142 LDSKMNLGLIGNGTSQHLHPLSSNWSLGGADKYGIHAAPT-FPLGGNNSAISYMSLANQL 201
                  G  G G             +GG   +      +  P  G  S+          
Sbjct: 123 -----ETGAGGGG-----------GGIGGPAMFDADIMRSRVPGNGGRSS---------- 154

Query: 202 LSVPKGWRNGDWLC---NCGFHNYSSRAQCKKCNA 212
                 W++GDW+C    C  HN++SR +C +CNA
Sbjct: 183 ------WKSGDWICTRIGCNEHNFASRMECFRCNA 154

The following BLAST results are available for this feature:

BLAST of CsGy6G031200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O13801	1.2e-06	26.17	Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (stra...	[more]
O95218	1.0e-05	32.53	Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=Z...	[more]
Q9R020	1.0e-05	32.53	Zinc finger Ran-binding domain-containing protein 2 OS=Mus musculus OX=10090 GN=...	[more]
Q19QU3	1.0e-05	32.53	Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRA...	[more]
Q5R580	1.0e-05	32.53	Zinc finger Ran-binding domain-containing protein 2 OS=Pongo abelii OX=9601 GN=Z...	[more]

BLAST of CsGy6G031200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134868.1	1.35e-252	99.69	uncharacterized RNA-binding protein C17H9.04c [Cucumis sativus] >KGN48905.1 hypo...	[more]
KAA0025683.1	5.48e-252	90.22	putative RNA-binding protein C17H9.04c [Cucumis melo var. makuwa] >TYK12558.1 pu...	[more]
XP_008440810.1	1.75e-248	97.85	PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo]	[more]
XP_038883349.1	5.61e-245	96.00	uncharacterized RNA-binding protein C17H9.04c [Benincasa hispida]	[more]
XP_022132998.1	3.77e-227	89.85	uncharacterized RNA-binding protein C17H9.04c [Momordica charantia]	[more]

BLAST of CsGy6G031200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGM9	6.52e-253	99.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505830 PE=4 SV=1	[more]
A0A5A7SLZ2	2.65e-252	90.22	Putative RNA-binding protein C17H9.04c OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3B1J3	8.49e-249	97.85	uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1BXT0	1.82e-227	89.85	uncharacterized RNA-binding protein C17H9.04c OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1EFP4	1.27e-225	90.21	uncharacterized RNA-binding protein C17H9.04c OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of CsGy6G031200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17975.1	3.0e-93	54.69	zinc finger (Ran-binding) family protein	[more]
AT5G25490.1	2.0e-12	27.48	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT2G26695.1	4.5e-12	28.19	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G48570.1	1.1e-07	36.23	zinc finger (Ran-binding) family protein	[more]
AT3G15680.1	4.3e-07	24.65	Ran BP2/NZF zinc finger-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 67..91 e-value: 2.1E-8 score: 43.9 coord: 305..328 e-value: 0.055 score: 21.8 coord: 189..212 e-value: 1.4E-4 score: 31.2 coord: 24..48 e-value: 1.8E-6 score: 37.5
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 65..93 e-value: 3.5E-7 score: 29.4 coord: 303..325 e-value: 1.8E-5 score: 23.9 coord: 22..49 e-value: 4.4E-7 score: 29.1
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 69..88
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 26..45
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 65..94 score: 10.116323
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 22..51 score: 9.946939
None	No IPR available	GENE3D	4.10.1060.10		coord: 60..94 e-value: 3.3E-10 score: 41.0 coord: 19..50 e-value: 9.0E-9 score: 36.5 coord: 183..214 e-value: 1.3E-7 score: 32.7 coord: 298..329 e-value: 9.0E-8 score: 33.3
None	No IPR available	PANTHER	PTHR23111:SF71	OS04G0110600 PROTEIN	coord: 20..154
None	No IPR available	PANTHER	PTHR23111:SF71	OS04G0110600 PROTEIN	coord: 184..250
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 184..250
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 300..324 coord: 20..154
None	No IPR available	PANTHER	PTHR23111:SF71	OS04G0110600 PROTEIN	coord: 300..324
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 185..212
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 22..50
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 59..93
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 297..326

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G031200.2	CsGy6G031200.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070935	3'-UTR-mediated mRNA stabilization
biological_process	GO:0009737	response to abscisic acid
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding