CsGy6G031135 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G031135
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr6: 29018435 .. 29018831 (+)
RNA-Seq ExpressionCsGy6G031135
SyntenyCsGy6G031135
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGCAAGACACTGACCCTACACACTACCCTAAACCTCTCCTTTTATATTCTCTTTATTTCCCCATTTCCTCCCCTACACTACTCCTCCTTCAAATTACACAATCCCCCTCCTGATCTCCTGATCTCCTCATCTCCAGACACCACACCCACAACCACTTCCACCACAGTCTCACCGCCATCGCCCACCGTCGCCTCCGCCTCTGTCTTTGTTTTCTTACCCAGGTATATAAATTCTTAATATTAATTCTGAGAGCATGGTGTGTACAGTTAATGATAGAAGTGGCAGAAAACAAAGACATGGGAGATGAATTTCAGAGTATTTAGGTTTAAATTAGGGTTTGGTATTTTCGAGGTTTCTGATTACAGTTTCTGCCTTCAAAATTCTCGACAACTAG

mRNA sequence

ATGCGCAAGACACTGACCCTACACACTACCCTAAACCTCTCCTTTTATATTCTCTTTATTTCCCCATTTCCTCCCCTACACTACTCCTCCTTCAAATTACACAATCCCCCTCCTGATCTCCTGATCTCCTCATCTCCAGACACCACACCCACAACCACTTCCACCACAGTCTCACCGCCATCGCCCACCGTCGCCTCCGCCTCTGTCTTTGTTTTCTTACCCAGGTTTCTGATTACAGTTTCTGCCTTCAAAATTCTCGACAACTAG

Coding sequence (CDS)

ATGCGCAAGACACTGACCCTACACACTACCCTAAACCTCTCCTTTTATATTCTCTTTATTTCCCCATTTCCTCCCCTACACTACTCCTCCTTCAAATTACACAATCCCCCTCCTGATCTCCTGATCTCCTCATCTCCAGACACCACACCCACAACCACTTCCACCACAGTCTCACCGCCATCGCCCACCGTCGCCTCCGCCTCTGTCTTTGTTTTCTTACCCAGGTTTCTGATTACAGTTTCTGCCTTCAAAATTCTCGACAACTAG

Protein sequence

MRKTLTLHTTLNLSFYILFISPFPPLHYSSFKLHNPPPDLLISSSPDTTPTTTSTTVSPPSPTVASASVFVFLPRFLITVSAFKILDN*
Homology
[Close]
BLAST of CsGy6G031135 vs. NCBI nr
Match: KGN48897.1 (hypothetical protein Csa_003089 [Cucumis sativus])

HSP 1 Score: 168 bits (425), Expect = 2.90e-52
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1  MRKTLTLHTTLNLSFYILFISPFPPLHYSSFKLHNPPPDLLISSSPDTTPTTTSTTVSPP 60
          MRKTLTLHTTLNLSFYILFISPFPPLHYSSFKLHNPPPDLLISSSPDTTPTTTSTTVSPP
Sbjct: 1  MRKTLTLHTTLNLSFYILFISPFPPLHYSSFKLHNPPPDLLISSSPDTTPTTTSTTVSPP 60

Query: 61 SPTVASASVFVFLPRFLITVSAFKILDN 88
          SP+VASASVFVFLPRFLITVSAFKILDN
Sbjct: 61 SPSVASASVFVFLPRFLITVSAFKILDN 88

[Close]
BLAST of CsGy6G031135 vs. ExPASy TrEMBL
Match: A0A0A0KKM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505260 PE=4 SV=1)

HSP 1 Score: 168 bits (425), Expect = 1.40e-52
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1  MRKTLTLHTTLNLSFYILFISPFPPLHYSSFKLHNPPPDLLISSSPDTTPTTTSTTVSPP 60
          MRKTLTLHTTLNLSFYILFISPFPPLHYSSFKLHNPPPDLLISSSPDTTPTTTSTTVSPP
Sbjct: 1  MRKTLTLHTTLNLSFYILFISPFPPLHYSSFKLHNPPPDLLISSSPDTTPTTTSTTVSPP 60

Query: 61 SPTVASASVFVFLPRFLITVSAFKILDN 88
          SP+VASASVFVFLPRFLITVSAFKILDN
Sbjct: 61 SPSVASASVFVFLPRFLITVSAFKILDN 88

The following BLAST results are available for this feature:
BLAST of CsGy6G031135 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G031135 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48897.12.90e-5298.86hypothetical protein Csa_003089 [Cucumis sativus][more]
BLAST of CsGy6G031135 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKM11.40e-5298.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G505260 PE=4 SV=1[more]
BLAST of CsGy6G031135 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G031135.1CsGy6G031135.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane