Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTACTATCATCATCTTCTTTACTGCAATCATTGCCGGTTAATCGTCCGAATTTAGCATGTAAACCGGCGAATCCACGGACGGGTGTGAAGGTTCAGGCCATGGCAAAGGAAGGAAGCGAGAGCGAAGGGGGCATTGCAGAGACGGTGGCTATAGCCGGTGGGTTAGTGGCGACCCCAGTGATCGGTTGGTCGCTGTATACCCTGAAGACAACTGGGTGCGGGCTACCGCCGGGGCCAGGTGGGTCACTCGGCGCACTGGAAGGCGTTAGCTACTTGGCGGTGGTGGGAATCGTGGGTTGGTCTCTGTACACGAAGACGAAAACTGGATCGGGTCTGCCCAACGGCCCTTTCGGGCTATTGGGCGCCGTGGAAGGTCTGTCCTACTTGAGCTTGTTGGCCATCTTGGTCGTTTTTGGGTTGCAGTACTTGGACCAAGGCTACATCCCCGGACCTCTTCCGGCCGATCAGTGCTTTGGTTGA
mRNA sequence
ATGCTACTATCATCATCTTCTTTACTGCAATCATTGCCGGTTAATCGTCCGAATTTAGCATGTAAACCGGCGAATCCACGGACGGGTGTGAAGGTTCAGGCCATGGCAAAGGAAGGAAGCGAGAGCGAAGGGGGCATTGCAGAGACGGTGGCTATAGCCGGTGGGTTAGTGGCGACCCCAGTGATCGGTTGGTCGCTGTATACCCTGAAGACAACTGGGTGCGGGCTACCGCCGGGGCCAGGTGGGTCACTCGGCGCACTGGAAGGCGTTAGCTACTTGGCGGTGGTGGGAATCGTGGGTTGGTCTCTGTACACGAAGACGAAAACTGGATCGGGTCTGCCCAACGGCCCTTTCGGGCTATTGGGCGCCGTGGAAGGTCTGTCCTACTTGAGCTTGTTGGCCATCTTGGTCGTTTTTGGGTTGCAGTACTTGGACCAAGGCTACATCCCCGGACCTCTTCCGGCCGATCAGTGCTTTGGTTGA
Coding sequence (CDS)
ATGCTACTATCATCATCTTCTTTACTGCAATCATTGCCGGTTAATCGTCCGAATTTAGCATGTAAACCGGCGAATCCACGGACGGGTGTGAAGGTTCAGGCCATGGCAAAGGAAGGAAGCGAGAGCGAAGGGGGCATTGCAGAGACGGTGGCTATAGCCGGTGGGTTAGTGGCGACCCCAGTGATCGGTTGGTCGCTGTATACCCTGAAGACAACTGGGTGCGGGCTACCGCCGGGGCCAGGTGGGTCACTCGGCGCACTGGAAGGCGTTAGCTACTTGGCGGTGGTGGGAATCGTGGGTTGGTCTCTGTACACGAAGACGAAAACTGGATCGGGTCTGCCCAACGGCCCTTTCGGGCTATTGGGCGCCGTGGAAGGTCTGTCCTACTTGAGCTTGTTGGCCATCTTGGTCGTTTTTGGGTTGCAGTACTTGGACCAAGGCTACATCCCCGGACCTCTTCCGGCCGATCAGTGCTTTGGTTGA
Protein sequence
MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATPVIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGLLGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG*
Homology
BLAST of CsGy6G030430 vs. NCBI nr
Match:
XP_031744055.1 (uncharacterized protein LOC101218070 [Cucumis sativus] >KGN48822.1 hypothetical protein Csa_003134 [Cucumis sativus])
HSP 1 Score: 317 bits (812), Expect = 5.57e-109
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
Query: 1 MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP
Sbjct: 1 MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG 160
LGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG 160
BLAST of CsGy6G030430 vs. NCBI nr
Match:
XP_008440700.1 (PREDICTED: uncharacterized protein LOC103485040 [Cucumis melo] >KAA0036236.1 uncharacterized protein E6C27_scaffold18G00340 [Cucumis melo var. makuwa] >TYK12631.1 uncharacterized protein E5676_scaffold255G002180 [Cucumis melo var. makuwa])
HSP 1 Score: 307 bits (786), Expect = 5.14e-105
Identity = 155/160 (96.88%), Postives = 157/160 (98.12%), Query Frame = 0
Query: 1 MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSLL+SLPV R NLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP
Sbjct: 1 MLLSSSSLLRSLPVTRQNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG 160
LGAVEGLSYLSLLAILVVFGLQY +QGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of CsGy6G030430 vs. NCBI nr
Match:
XP_038882163.1 (uncharacterized protein LOC120073396 [Benincasa hispida])
HSP 1 Score: 305 bits (781), Expect = 2.98e-104
Identity = 154/160 (96.25%), Postives = 157/160 (98.12%), Query Frame = 0
Query: 1 MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSLL+SLPVNR NLACKPANPRT VKVQAMAKEGSESEGGIAETVAIAGGLVATP
Sbjct: 1 MLLSSSSLLRSLPVNRLNLACKPANPRTRVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEG+SYLAVVGIVGWSLYTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGISYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG 160
LGAVEGLSYLSLLAILVVFGLQY +QGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of CsGy6G030430 vs. NCBI nr
Match:
XP_022950150.1 (uncharacterized protein LOC111453326 [Cucurbita moschata] >XP_023544302.1 uncharacterized protein LOC111803919 [Cucurbita pepo subsp. pepo] >KAG7034154.1 hypothetical protein SDJN02_03881, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 296 bits (757), Expect = 1.36e-100
Identity = 148/160 (92.50%), Postives = 154/160 (96.25%), Query Frame = 0
Query: 1 MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSL+++LPVNR N CKPANPRT VK+QAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1 MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS YTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSAYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG 160
LGAVEGLSYLSLLAILVVFGLQY +QGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of CsGy6G030430 vs. NCBI nr
Match:
KAG6603983.1 (hypothetical protein SDJN03_04592, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 295 bits (756), Expect = 1.93e-100
Identity = 148/160 (92.50%), Postives = 153/160 (95.62%), Query Frame = 0
Query: 1 MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSL++ LPVNR N CKPANPRT VK+QAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1 MLLSSSSLVRELPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS YTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSAYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG 160
LGAVEGLSYLSLLAILVVFGLQY +QGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of CsGy6G030430 vs. ExPASy TrEMBL
Match:
A0A0A0KKC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502600 PE=4 SV=1)
HSP 1 Score: 317 bits (812), Expect = 2.70e-109
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
Query: 1 MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP
Sbjct: 1 MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG 160
LGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG 160
BLAST of CsGy6G030430 vs. ExPASy TrEMBL
Match:
A0A5A7T239 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002180 PE=4 SV=1)
HSP 1 Score: 307 bits (786), Expect = 2.49e-105
Identity = 155/160 (96.88%), Postives = 157/160 (98.12%), Query Frame = 0
Query: 1 MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSLL+SLPV R NLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP
Sbjct: 1 MLLSSSSLLRSLPVTRQNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG 160
LGAVEGLSYLSLLAILVVFGLQY +QGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of CsGy6G030430 vs. ExPASy TrEMBL
Match:
A0A1S3B1A0 (uncharacterized protein LOC103485040 OS=Cucumis melo OX=3656 GN=LOC103485040 PE=4 SV=1)
HSP 1 Score: 307 bits (786), Expect = 2.49e-105
Identity = 155/160 (96.88%), Postives = 157/160 (98.12%), Query Frame = 0
Query: 1 MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSLL+SLPV R NLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP
Sbjct: 1 MLLSSSSLLRSLPVTRQNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG 160
LGAVEGLSYLSLLAILVVFGLQY +QGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of CsGy6G030430 vs. ExPASy TrEMBL
Match:
A0A6J1GEW2 (uncharacterized protein LOC111453326 OS=Cucurbita moschata OX=3662 GN=LOC111453326 PE=4 SV=1)
HSP 1 Score: 296 bits (757), Expect = 6.58e-101
Identity = 148/160 (92.50%), Postives = 154/160 (96.25%), Query Frame = 0
Query: 1 MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSL+++LPVNR N CKPANPRT VK+QAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1 MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS YTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSAYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG 160
LGAVEGLSYLSLLAILVVFGLQY +QGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of CsGy6G030430 vs. ExPASy TrEMBL
Match:
A0A6J1IN27 (uncharacterized protein LOC111478511 OS=Cucurbita maxima OX=3661 GN=LOC111478511 PE=4 SV=1)
HSP 1 Score: 293 bits (751), Expect = 5.41e-100
Identity = 147/160 (91.88%), Postives = 154/160 (96.25%), Query Frame = 0
Query: 1 MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSL+++LPVNR N CKPANPRT VK+QAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1 MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS+YTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSVYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG 160
LGAVEGLSYLSLLAILVVFGLQY +QGYIPGPLPA QCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPAAQCFG 160
BLAST of CsGy6G030430 vs. TAIR 10
Match:
AT3G50685.1 (unknown protein; Has 52 Blast hits to 46 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )
HSP 1 Score: 215.3 bits (547), Expect = 3.6e-56
Identity = 114/161 (70.81%), Postives = 130/161 (80.75%), Query Frame = 0
Query: 2 LLSSSSLLQSLP--VNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVAT 61
+L S + SLP +R NL + P +V A AK+ +++ GG ET AIAG LV+T
Sbjct: 1 MLLLSPISASLPPSFHRGNLIRRSIKPLG--RVVAKAKDNTDT-GGFLETAAIAGSLVST 60
Query: 62 PVIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFG 121
PVIGWSLYTLKTTGCGLPPGP G +GALEGVSYL VVGIVGWSLYTKTKTGSGLPNGPFG
Sbjct: 61 PVIGWSLYTLKTTGCGLPPGPAGLIGALEGVSYLVVVGIVGWSLYTKTKTGSGLPNGPFG 120
Query: 122 LLGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG 161
LLGAVEGLSYLS+LAILVVFG+Q+LD G +PGPLP+DQCFG
Sbjct: 121 LLGAVEGLSYLSVLAILVVFGIQFLDNGSVPGPLPSDQCFG 158
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_031744055.1 | 5.57e-109 | 100.00 | uncharacterized protein LOC101218070 [Cucumis sativus] >KGN48822.1 hypothetical ... | [more] |
XP_008440700.1 | 5.14e-105 | 96.88 | PREDICTED: uncharacterized protein LOC103485040 [Cucumis melo] >KAA0036236.1 unc... | [more] |
XP_038882163.1 | 2.98e-104 | 96.25 | uncharacterized protein LOC120073396 [Benincasa hispida] | [more] |
XP_022950150.1 | 1.36e-100 | 92.50 | uncharacterized protein LOC111453326 [Cucurbita moschata] >XP_023544302.1 unchar... | [more] |
KAG6603983.1 | 1.93e-100 | 92.50 | hypothetical protein SDJN03_04592, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KKC0 | 2.70e-109 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502600 PE=4 SV=1 | [more] |
A0A5A7T239 | 2.49e-105 | 96.88 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3B1A0 | 2.49e-105 | 96.88 | uncharacterized protein LOC103485040 OS=Cucumis melo OX=3656 GN=LOC103485040 PE=... | [more] |
A0A6J1GEW2 | 6.58e-101 | 92.50 | uncharacterized protein LOC111453326 OS=Cucurbita moschata OX=3662 GN=LOC1114533... | [more] |
A0A6J1IN27 | 5.41e-100 | 91.88 | uncharacterized protein LOC111478511 OS=Cucurbita maxima OX=3661 GN=LOC111478511... | [more] |
Match Name | E-value | Identity | Description | |
AT3G50685.1 | 3.6e-56 | 70.81 | unknown protein; Has 52 Blast hits to 46 proteins in 20 species: Archae - 0; Bac... | [more] |