CsGy6G030070 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G030070
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Pentatricopeptide repeat-containing protein
Location	Gy14Chr6: 28436208 .. 28438320 (-)
RNA-Seq Expression	CsGy6G030070
Synteny	CsGy6G030070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTCGAACTCCAAGGTACTTCAAATTCTCCAATGCCTCTTTCATTTTCTCTGCAATTTTCTCCCACATTCACTCCATCTTATTCTTCTTCCCAACTCTCCCGGCTATGGCTTCCACTCCCTTCATCTATAAAGAAAGCCGTTTCGACTCGAGTGGTCTGCATTTCGACTCGACCCAGTAGGAAATTTGGGGTTAAAACCGACAGATCCGAGGCTGAAGAACTGGTTCGAGGTATAATTAGAAATTTCAGCGACAAAGAACCATTGCTCAAGACACTGGACAAATACGTTCGTGTTATGAGAACTGAGCACTGTTTTCTTCTATTTGAGGAATTGGGGAAAAGAGATAAATGGCTTGAATGTCTCGAGGTTCGCTTCTCTTCTTTTGAACTCTGAATTTGAGCCTATGGGTATTGACTTTTGGAACTTGGATTGATGGGTAGTGGTGAAAATGCTCAAAGACGGTTGATTGAATTTGAAATCGAGGATATGAATTTTCAATTTGTGAACATTACACAGAATTAATTGAATTTTCACTGTAGTTCAAGCTCTATTTAGGCATAGATGAAGAAGGGAGAGTCTACATTTTTCTGCTATTATGTTTTATTGATGTGTTTTCATCTCCAGGTCTTCAGATGGATGCAGAAACAACGTTGGTATATTGCTGACAATGGGGTTTATTCTAAACTAATATCTATTATGGGAAAGAAGGGTCAAATTCGGATGGCTATGTGGTTGTTTTCTGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTGTACAATGCACTTATCACAGCACATCTTCATTCTAAGGACAAAGCTAAAGCTTTAGTTAAAGTCCTTTCGTACTTCGAGAAGATGAAAGGAATGGAACGATGTAAGCCAAACATTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGCAAAAGTGGATCAAGTTAATACATTGTTTAAAGATCTCGATGAGAGTGTTGTTTCAGCTGATATATATACGTATAATGGAGTGATGGATGCATATGGGAAAAATGGGAACATTAAAGAGATGGAATTGATGCTTGCTCGCATGAAAAGCAATCAAATTAAACCAGATATCATATCCTTTAACTTGTTGATTGATTCATATGGGAAGAAACAGTTATTTGACAAGATGGAACAGGTGTTTAAGAGCTTACTACGATCGAAGGAGAGGCCAACACTGCCTACTTTCAATTCAATGATCACAAACTACGGGAAGGCACGGCTTAGAGAGAAAGCTGAAGAGGTTTTTAGGAAGATGAAGGATATGGGATATGACCCCAGCTATGTTACTTGTGAAAGCCTGATCATGATGTATGGTCATTGTGACTGTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAATTCTGGGAAGGAGGTGAGAGTCTCAACCCTCAATGCCATGCTTGATGTTTACTGCATCAATGGTTTACCCTTGGAAGCCGATTTGCTTTTTGAGAGTGCAGGTAATATGAGGGTATTTCCAGATTCAACAACATACAAGCTTCTTTATAAAGCTTACACCAAAGCTGATAAGAAGGAACTTCTGGAGAAGCTCTTGAAGAATATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACCATTGGATCGTCACAAGAAAAACCAGAACCTGCAAGAACTAGAACAGGTTCAAGAAACTCAGATAGTAGTGTGGAAAAACAGTCATCTTCAAGAACTAGATCAGGTCCAAGAAACTTAGAAAGTAATGTGCAAAAACCAAGATCTTCAAGAACTAGAACAGGTTCACGAAACTCAGAAAGTGGTGTGGAAAACCATGCTCCAGAGCTAGGGTTAGCTTAAGAATTTCCTTTTTGTGGTCAATCTACATTCTTTAGAAGCTTCTTGACTTCTCCTCTTAAAATTTGGAGAATGGTACGGCAGTTTTACAAAAATTACAGGAATGTTGAGTTTTGAAAAGAAACCAAAATTTTGTATATATGCTCATTTATTTTCCCATGAAATTTTATGATTTGATGAGGTCCGACTCCTCACAAAATTGGGATGTACAGACAAACTAAGTGTGCTTTGTATTTGTGG

mRNA sequence

TGTCGAACTCCAAGGTACTTCAAATTCTCCAATGCCTCTTTCATTTTCTCTGCAATTTTCTCCCACATTCACTCCATCTTATTCTTCTTCCCAACTCTCCCGGCTATGGCTTCCACTCCCTTCATCTATAAAGAAAGCCGTTTCGACTCGAGTGGTCTGCATTTCGACTCGACCCAGTAGGAAATTTGGGGTTAAAACCGACAGATCCGAGGCTGAAGAACTGGTTCGAGGTATAATTAGAAATTTCAGCGACAAAGAACCATTGCTCAAGACACTGGACAAATACGTTCGTGTTATGAGAACTGAGCACTGTTTTCTTCTATTTGAGGAATTGGGGAAAAGAGATAAATGGCTTGAATGTCTCGAGGTCTTCAGATGGATGCAGAAACAACGTTGGTATATTGCTGACAATGGGGTTTATTCTAAACTAATATCTATTATGGGAAAGAAGGGTCAAATTCGGATGGCTATGTGGTTGTTTTCTGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTGTACAATGCACTTATCACAGCACATCTTCATTCTAAGGACAAAGCTAAAGCTTTAGTTAAAGTCCTTTCGTACTTCGAGAAGATGAAAGGAATGGAACGATGTAAGCCAAACATTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGCAAAAGTGGATCAAGTTAATACATTGTTTAAAGATCTCGATGAGAGTGTTGTTTCAGCTGATATATATACGTATAATGGAGTGATGGATGCATATGGGAAAAATGGGAACATTAAAGAGATGGAATTGATGCTTGCTCGCATGAAAAGCAATCAAATTAAACCAGATATCATATCCTTTAACTTGTTGATTGATTCATATGGGAAGAAACAGTTATTTGACAAGATGGAACAGGTGTTTAAGAGCTTACTACGATCGAAGGAGAGGCCAACACTGCCTACTTTCAATTCAATGATCACAAACTACGGGAAGGCACGGCTTAGAGAGAAAGCTGAAGAGGTTTTTAGGAAGATGAAGGATATGGGATATGACCCCAGCTATGTTACTTGTGAAAGCCTGATCATGATGTATGGTCATTGTGACTGTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAATTCTGGGAAGGAGGTGAGAGTCTCAACCCTCAATGCCATGCTTGATGTTTACTGCATCAATGGTTTACCCTTGGAAGCCGATTTGCTTTTTGAGAGTGCAGGTAATATGAGGGTATTTCCAGATTCAACAACATACAAGCTTCTTTATAAAGCTTACACCAAAGCTGATAAGAAGGAACTTCTGGAGAAGCTCTTGAAGAATATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACCATTGGATCGTCACAAGAAAAACCAGAACCTGCAAGAACTAGAACAGGTTCAAGAAACTCAGATAGTAGTGTGGAAAAACAGTCATCTTCAAGAACTAGATCAGGTCCAAGAAACTTAGAAAGTAATGTGCAAAAACCAAGATCTTCAAGAACTAGAACAGGTTCACGAAACTCAGAAAGTGGTGTGGAAAACCATGCTCCAGAGCTAGGGTTAGCTTAAGAATTTCCTTTTTGTGGTCAATCTACATTCTTTAGAAGCTTCTTGACTTCTCCTCTTAAAATTTGGAGAATGGTACGGCAGTTTTACAAAAATTACAGGAATGTTGAGTTTTGAAAAGAAACCAAAATTTTGTATATATGCTCATTTATTTTCCCATGAAATTTTATGATTTGATGAGGTCCGACTCCTCACAAAATTGGGATGTACAGACAAACTAAGTGTGCTTTGTATTTGTGG

Coding sequence (CDS)

ATGCCTCTTTCATTTTCTCTGCAATTTTCTCCCACATTCACTCCATCTTATTCTTCTTCCCAACTCTCCCGGCTATGGCTTCCACTCCCTTCATCTATAAAGAAAGCCGTTTCGACTCGAGTGGTCTGCATTTCGACTCGACCCAGTAGGAAATTTGGGGTTAAAACCGACAGATCCGAGGCTGAAGAACTGGTTCGAGGTATAATTAGAAATTTCAGCGACAAAGAACCATTGCTCAAGACACTGGACAAATACGTTCGTGTTATGAGAACTGAGCACTGTTTTCTTCTATTTGAGGAATTGGGGAAAAGAGATAAATGGCTTGAATGTCTCGAGGTCTTCAGATGGATGCAGAAACAACGTTGGTATATTGCTGACAATGGGGTTTATTCTAAACTAATATCTATTATGGGAAAGAAGGGTCAAATTCGGATGGCTATGTGGTTGTTTTCTGAGATGCGAAATAGTGGGTGTCGACCTGATACTTCTGTGTACAATGCACTTATCACAGCACATCTTCATTCTAAGGACAAAGCTAAAGCTTTAGTTAAAGTCCTTTCGTACTTCGAGAAGATGAAAGGAATGGAACGATGTAAGCCAAACATTGTTACTTACAACATTCTTACCAGAGCTTTTGCTCAAGCTGCAAAAGTGGATCAAGTTAATACATTGTTTAAAGATCTCGATGAGAGTGTTGTTTCAGCTGATATATATACGTATAATGGAGTGATGGATGCATATGGGAAAAATGGGAACATTAAAGAGATGGAATTGATGCTTGCTCGCATGAAAAGCAATCAAATTAAACCAGATATCATATCCTTTAACTTGTTGATTGATTCATATGGGAAGAAACAGTTATTTGACAAGATGGAACAGGTGTTTAAGAGCTTACTACGATCGAAGGAGAGGCCAACACTGCCTACTTTCAATTCAATGATCACAAACTACGGGAAGGCACGGCTTAGAGAGAAAGCTGAAGAGGTTTTTAGGAAGATGAAGGATATGGGATATGACCCCAGCTATGTTACTTGTGAAAGCCTGATCATGATGTATGGTCATTGTGACTGTGTTTCTAAGGCTAGAGAAATCTTTGATGGAATGGTTAATTCTGGGAAGGAGGTGAGAGTCTCAACCCTCAATGCCATGCTTGATGTTTACTGCATCAATGGTTTACCCTTGGAAGCCGATTTGCTTTTTGAGAGTGCAGGTAATATGAGGGTATTTCCAGATTCAACAACATACAAGCTTCTTTATAAAGCTTACACCAAAGCTGATAAGAAGGAACTTCTGGAGAAGCTCTTGAAGAATATGGACAAAGCTGGCATCATTCCAAATAAGAGATTCTTCCTCGATGCTTTGGGAACCATTGGATCGTCACAAGAAAAACCAGAACCTGCAAGAACTAGAACAGGTTCAAGAAACTCAGATAGTAGTGTGGAAAAACAGTCATCTTCAAGAACTAGATCAGGTCCAAGAAACTTAGAAAGTAATGTGCAAAAACCAAGATCTTCAAGAACTAGAACAGGTTCACGAAACTCAGAAAGTGGTGTGGAAAACCATGCTCCAGAGCTAGGGTTAGCTTAA

Protein sequence

MPLSFSLQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTDRSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSDSSVEKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA*

Homology

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BLAST of CsGy6G030070 vs. ExPASy Swiss-Prot
Match: Q9SV96 (Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2453 PE=2 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 5.3e-170
Identity = 303/466 (65.02%), Postives = 365/466 (78.33%), Query Frame = 0


Query: 34  KKAVSTRVVCISTRPSRKFGVK-TDRSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTE 93
           +++  TR+ C +    RK   + +   E   LVR ++   SD+EPL+KTLDKYV+V+R +
Sbjct: 39  RRSTRTRITCGAISSRRKLAERESAERENRVLVRSLMSRISDREPLVKTLDKYVKVVRCD 98

Query: 94  HCFLLFEELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSE 153
           HCFLLFEELGK DKWL+CLEVFRWMQKQRWYI DNGVYSKLIS+MGKKGQ RMAMWLFSE
Sbjct: 99  HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSE 158

Query: 154 MRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAF 213
           M+NSGCRPD SVYNALITAHLH++DKAKAL KV  Y +KMKG+ERC+PN+VTYNIL RAF
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218

Query: 214 AQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDI 273
           AQ+ KVDQVN LFKDLD S VS D+YT+NGVMDAYGKNG IKEME +L RM+SN+ KPDI
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278

Query: 274 ISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRK 333
           I+FN+LIDSYGKKQ F+KMEQ FKSL+RSKE+PTLPTFNSMI NYGKAR+ +KAE VF+K
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338

Query: 334 MKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGL 393
           M DM Y PS++T E +IMMYG+C  VS+AREIF+ +  S + ++ STLNAML+VYC NGL
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398

Query: 394 PLEADLLFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLD 453
            +EAD LF +A   RV PD++TYK LYKAYTKAD KE ++ L+K M+K GI+PNKRFFL+
Sbjct: 399 YIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLE 458

Query: 454 ALGTIGSSQEKPEPARTRTGSRNSDSSVEKQSSSRTRSGPRNLESN 499
           AL   GS           +GS N  S+     SSR+R  P+    N
Sbjct: 459 ALEVFGS-------RLPGSGSENRKST----RSSRSRDSPKGRGGN 493

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BLAST of CsGy6G030070 vs. ExPASy Swiss-Prot
Match: A7LN87 (Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4577 GN=PPR5 PE=2 SV=1)

HSP 1 Score: 595.5 bits (1534), Expect = 5.9e-169
Identity = 297/459 (64.71%), Postives = 366/459 (79.74%), Query Frame = 0


Query: 38  STRVVCISTR-------PSRKFGVKTDRSEAEELVRGIIRNFS-DKEPLLKTLDKYVRVM 97
           +TR V ++ R       P+   GV    +EA ELVR ++R  +  KE L+  LD++VRV+
Sbjct: 27  ATRHVALAARSKRRGAGPAAAEGVDEAAAEAAELVRSLLRRTAGGKERLVPVLDRHVRVV 86

Query: 98  RTEHCFLLFEELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWL 157
           RTEHCFLLFEELG+RD WL+CL+VFRWMQKQRWY+ADNG+YSKLIS+MG+KGQIRMAMWL
Sbjct: 87  RTEHCFLLFEELGRRDAWLQCLDVFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWL 146

Query: 158 FSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILT 217
           FS+MRNSGC+PDTSVYN+LI AHLHS+DK KAL K L YFEKMK +ERC+P IVTYNIL 
Sbjct: 147 FSQMRNSGCKPDTSVYNSLIGAHLHSRDKTKALAKALGYFEKMKCIERCQPTIVTYNILL 206

Query: 218 RAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIK 277
           RAFAQA    QV+ LFKDLDESVVS D+YTYNGV+DAYGKNG IKEME +L RMKS Q +
Sbjct: 207 RAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAYGKNGMIKEMESVLVRMKSTQCR 266

Query: 278 PDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEV 337
           PD+I+FN+LIDSYG+KQ FDKMEQVFKSLLRSKERPT PTFNSMITNYG+ARLREKAE V
Sbjct: 267 PDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGRARLREKAESV 326

Query: 338 FRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCI 397
             KM+++G+ P+YVT E LI+MY HCDCVSKAR++FD +V S  +V +S+LN+ML+ YC+
Sbjct: 327 VEKMEELGFKPNYVTQECLIIMYAHCDCVSKARQVFDELVTSQTKVHLSSLNSMLEAYCM 386

Query: 398 NGLPLEADLLFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRF 457
           NGL  EAD L ++A    V P+ +TYKLLYKAYTKA+ K L++KLLK M+K GI+PNK+F
Sbjct: 387 NGLHTEADRLLDTALQQCVVPNGSTYKLLYKAYTKANDKLLVQKLLKRMNKQGIVPNKKF 446

Query: 458 FLDALGTIGSSQEKP--EPARTRTGSRNSDSSVEKQSSS 487
           FLDAL   G+S  KP   P        ++DS+ + ++++
Sbjct: 447 FLDALEAFGTSDRKPRTSPGINSASKPSTDSAGDSETAT 485

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BLAST of CsGy6G030070 vs. ExPASy Swiss-Prot
Match: A3ABE1 (Pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0750400 PE=3 SV=2)

HSP 1 Score: 593.2 bits (1528), Expect = 2.9e-168
Identity = 292/437 (66.82%), Postives = 353/437 (80.78%), Query Frame = 0


Query: 57  DRSEAEELVRGIIRNFS-DKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFR 116
           + +EA +LVR  +R  S  KE L+  LD++V+V+RTEHCFLLFEELG+RD WL+CLEVFR
Sbjct: 50  EAAEAADLVRFFLRRTSGGKERLVAVLDRHVKVVRTEHCFLLFEELGRRDGWLQCLEVFR 109

Query: 117 WMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHS 176
           WMQKQRWY+ADNG+YSKLIS+MG+KGQIRMAMWLFS+MRNSGCRPDTSVYN+LI  HLHS
Sbjct: 110 WMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCRPDTSVYNSLIGTHLHS 169

Query: 177 KDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSA 236
           +DK+KAL K L YFEKMK ++RC+PNIVTYNIL RAFAQA    Q++ LFKDLDES VS 
Sbjct: 170 RDKSKALAKALGYFEKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDESPVSP 229

Query: 237 DIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVF 296
           DIYTYNGVMDAYGKNG I EME +L RMKSNQ +PD+I+FN+LIDSYG+KQ FDKMEQVF
Sbjct: 230 DIYTYNGVMDAYGKNGMITEMESVLVRMKSNQCRPDVITFNILIDSYGRKQAFDKMEQVF 289

Query: 297 KSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHC 356
           KSLLRSKE+PT PTFNSMITNYGKARLREKAE V  KM +MG+ P+YVT E LIMMY +C
Sbjct: 290 KSLLRSKEKPTHPTFNSMITNYGKARLREKAECVLDKMTEMGFKPNYVTQECLIMMYAYC 349

Query: 357 DCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTY 416
           DCVS+AR+IFD +V+S   V +S++NAMLD YC+NGLP+EAD L +S       P ++TY
Sbjct: 350 DCVSRARQIFDELVSSQNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVPSASTY 409

Query: 417 KLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRN 476
           KLLYKAYTKA+ K+L++KLLK M+  GI+PNK+FFLDAL   G++ +KP    ++  +  
Sbjct: 410 KLLYKAYTKANDKKLIQKLLKRMNSQGIVPNKKFFLDALEAFGNTDKKPRTVPSKNSASK 469

Query: 477 SDSSVEKQSSSRTRSGP 493
            D      S + T S P
Sbjct: 470 PDVESANNSGTDTSSKP 486

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BLAST of CsGy6G030070 vs. ExPASy Swiss-Prot
Match: Q9SQU6 (Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2750 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.7e-39
Identity = 97/352 (27.56%), Postives = 171/352 (48.58%), Query Frame = 0


Query: 100 ELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCR 159
           +L  + +WL+ LEVF  +++Q +Y    G Y KL+ ++GK GQ   A  LF EM   G  
Sbjct: 97  DLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLE 156

Query: 160 PDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVD 219
           P   +Y AL+ A+  S      +    S  +KMK   +C+P++ TY+ L +A   A++ D
Sbjct: 157 PTVELYTALLAAYTRS----NLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFD 216

Query: 220 QVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARM-KSNQIKPDIISFNLL 279
            V++L+K++DE +++ +  T N V+  YG+ G   +ME +L+ M  S   KPD+ + N++
Sbjct: 217 LVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNII 276

Query: 280 IDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGY 339
           +  +G     D ME  ++        P   TFN +I +YGK R+ +K   V   M+ + +
Sbjct: 277 LSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEF 336

Query: 340 DPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADL 399
             +  T  ++I  +            FD M + G +    T   +++ Y   GL  +   
Sbjct: 337 PWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVIS 396

Query: 400 LFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFF 451
             + A    +  ++  Y  +  A  KAD    +E++   M +   + + R F
Sbjct: 397 SVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTF 444

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BLAST of CsGy6G030070 vs. ExPASy Swiss-Prot
Match: Q9SCP4 (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX=3702 GN=At3g53170 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.1e-37
Identity = 106/380 (27.89%), Postives = 171/380 (45.00%), Query Frame = 0


Query: 99  EELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGC 158
           +E  K ++W   L++F  ++KQ WY      Y+KL  ++G   Q   A  LF  M + G 
Sbjct: 66  DEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGL 125

Query: 159 RPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKV 218
           +P   VY +LI+ +     K++ L K  S  E MK +  CKP++ T+ +L     +  + 
Sbjct: 126 KPTIDVYTSLISVY----GKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRF 185

Query: 219 DQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLA----------------- 278
           D V ++  ++    V     TYN ++D YGK G  +EME +LA                 
Sbjct: 186 DLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNS 245

Query: 279 -------------------RMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSK 338
                              R +   ++PDI +FN+LI S+GK  ++ KM  V   + +  
Sbjct: 246 IIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRF 305

Query: 339 ERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAR 398
              T  T+N +I  +GKA   EK ++VFRKMK  G  P+ +T  SL+  Y     V K  
Sbjct: 306 FSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKID 365

Query: 399 EIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYKAY 443
            +   +VNS   +     N +++ Y   G       L+      +  PD  T+  + K Y
Sbjct: 366 SVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTY 425

[Close]

BLAST of CsGy6G030070 vs. NCBI nr
Match: XP_004143565.1 (pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic [Cucumis sativus] >KGN48788.1 hypothetical protein Csa_003022 [Cucumis sativus])

HSP 1 Score: 1033 bits (2672), Expect = 0.0
Identity = 528/528 (100.00%), Postives = 528/528 (100.00%), Query Frame = 0


Query: 1   MPLSFSLQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTDRSE 60
           MPLSFSLQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTDRSE
Sbjct: 1   MPLSFSLQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTDRSE 60

Query: 61  AEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQKQ 120
           AEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQKQ
Sbjct: 61  AEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQKQ 120

Query: 121 RWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK 180
           RWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK
Sbjct: 121 RWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK 180

Query: 181 ALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTY 240
           ALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTY
Sbjct: 181 ALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTY 240

Query: 241 NGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLR 300
           NGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLR
Sbjct: 241 NGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLR 300

Query: 301 SKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSK 360
           SKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSK
Sbjct: 301 SKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSK 360

Query: 361 AREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYK 420
           AREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYK
Sbjct: 361 AREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYK 420

Query: 421 AYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSDSSV 480
           AYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSDSSV
Sbjct: 421 AYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSDSSV 480

Query: 481 EKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 528
           EKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA
Sbjct: 481 EKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 528

[Close]

BLAST of CsGy6G030070 vs. NCBI nr
Match: KAA0036266.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 983 bits (2542), Expect = 0.0
Identity = 503/531 (94.73%), Postives = 514/531 (96.80%), Query Frame = 0


Query: 1   MPLSFSLQFSPTFTPSYSSS---QLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTD 60
           MPLS S QFSP FT SYSSS   QLSRLW P+PSS+KK  STRVVC+STRPSRK GVKTD
Sbjct: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWFPVPSSLKKTFSTRVVCVSTRPSRKSGVKTD 60

Query: 61  RSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWM 120
           RSEAEELVRGII+ FSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWL+CLEVFRWM
Sbjct: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
           KAKALVKVL YFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLR+KAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKL 420
           VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLP EAD+LFESAGNM+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420

Query: 421 LYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSD 480
           LYKAYTKAD KELLEKLLKNMDKAGIIPNKRFFLDALGTIGSS+EKPEPART+TGSRNS+
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480

Query: 481 SSVEKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 528
           SSVEKQSSSRTRSGPRNLESNVQKP SSRTRTGSRN ESGVENHAPELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 531

[Close]

BLAST of CsGy6G030070 vs. NCBI nr
Match: XP_008440667.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucumis melo] >TYK12660.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 981 bits (2536), Expect = 0.0
Identity = 503/531 (94.73%), Postives = 514/531 (96.80%), Query Frame = 0


Query: 1   MPLSFSLQFSPTFTPSYSSS---QLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTD 60
           MPLS S QFSP FT SYSSS   QLSRLWLP+PSS+KK  STRVVC+STR SRK GVKTD
Sbjct: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRLSRKSGVKTD 60

Query: 61  RSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWM 120
           RSEAEELVRGII+ FSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWL+CLEVFRWM
Sbjct: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
           KAKALVKVL YFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLR+KAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKL 420
           VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLP EAD+LFESAGNM+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420

Query: 421 LYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSD 480
           LYKAYTKAD KELLEKLLKNMDKAGIIPNKRFFLDALGTIGSS+EKPEPART+TGSRNS+
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480

Query: 481 SSVEKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 528
           SSVEKQSSSRTRSGPRNLESNVQKP SSRTRTGSRN ESGVENHAPELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 531

[Close]

BLAST of CsGy6G030070 vs. NCBI nr
Match: XP_023543919.1 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 905 bits (2340), Expect = 0.0
Identity = 463/531 (87.19%), Postives = 486/531 (91.53%), Query Frame = 0


Query: 1   MPLSFSLQFSPTFTPSYSSS---QLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTD 60
           MPLSFSLQFSP+FTP  SSS   QLS+ WLPLP S+++AVSTRVVCISTRP+RK G KTD
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSGAKTD 60

Query: 61  RSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWM 120
           RSEAEELVRG+IR FSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWL+CLEVFRWM
Sbjct: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
           KAKALVKVL YFEKMKGMERCKPN+VTYNILTRAFAQA KVDQVN LFKDLDES+VSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240

Query: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNG IKEME MLARMKSN+IKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLRE+AEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKL 420
           VSKAREIFDGMVNSGK VRVSTLNAMLDVYC+NGLP+EADLLFESA +M+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420

Query: 421 LYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSD 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPEPART TGSR+S+
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480

Query: 481 SSVEKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 528
           SSVEK                   P SSR R GSR  ES V+NHAPELGLA
Sbjct: 481 SSVEK-------------------PISSRNRRGSRKLESSVKNHAPELGLA 512

[Close]

BLAST of CsGy6G030070 vs. NCBI nr
Match: KAG7034169.1 (Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 904 bits (2337), Expect = 0.0
Identity = 463/531 (87.19%), Postives = 485/531 (91.34%), Query Frame = 0


Query: 1   MPLSFSLQFSPTFTPSYSSS---QLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTD 60
           MPLSFSLQFSP+FTP  SSS   QLS+ WLPLP S+++AVSTRVVCISTRP+RK   KTD
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60

Query: 61  RSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWM 120
           RSEAEELVRG+IR FSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWL+CLEVFRWM
Sbjct: 61  RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
           KAKALVKVL YFEKMKGMERCKPN+VTYNILTRAFAQA KVDQVN LFKDLDES+VSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240

Query: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNG IKEME MLARMKSN+IKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKL 420
           VSKAREIFDGMVNSGK VRVSTLNAMLDVYC+NGLP+EADLLFESA +M+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420

Query: 421 LYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSD 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPEPART TGSR+S+
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480

Query: 481 SSVEKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 528
           SSVEK                   P SSR R GSR  ES V+NHAPELGLA
Sbjct: 481 SSVEK-------------------PISSRNRRGSRKLESSVKNHAPELGLA 512

[Close]

BLAST of CsGy6G030070 vs. ExPASy TrEMBL
Match: A0A0A0KGV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501290 PE=3 SV=1)

HSP 1 Score: 1033 bits (2672), Expect = 0.0
Identity = 528/528 (100.00%), Postives = 528/528 (100.00%), Query Frame = 0


Query: 1   MPLSFSLQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTDRSE 60
           MPLSFSLQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTDRSE
Sbjct: 1   MPLSFSLQFSPTFTPSYSSSQLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTDRSE 60

Query: 61  AEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQKQ 120
           AEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQKQ
Sbjct: 61  AEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWMQKQ 120

Query: 121 RWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK 180
           RWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK
Sbjct: 121 RWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKDKAK 180

Query: 181 ALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTY 240
           ALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTY
Sbjct: 181 ALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTY 240

Query: 241 NGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLR 300
           NGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLR
Sbjct: 241 NGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLR 300

Query: 301 SKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSK 360
           SKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSK
Sbjct: 301 SKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSK 360

Query: 361 AREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYK 420
           AREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYK
Sbjct: 361 AREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYK 420

Query: 421 AYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSDSSV 480
           AYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSDSSV
Sbjct: 421 AYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSDSSV 480

Query: 481 EKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 528
           EKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA
Sbjct: 481 EKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 528

[Close]

BLAST of CsGy6G030070 vs. ExPASy TrEMBL
Match: A0A5A7T266 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18G00650 PE=3 SV=1)

HSP 1 Score: 983 bits (2542), Expect = 0.0
Identity = 503/531 (94.73%), Postives = 514/531 (96.80%), Query Frame = 0


Query: 1   MPLSFSLQFSPTFTPSYSSS---QLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTD 60
           MPLS S QFSP FT SYSSS   QLSRLW P+PSS+KK  STRVVC+STRPSRK GVKTD
Sbjct: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWFPVPSSLKKTFSTRVVCVSTRPSRKSGVKTD 60

Query: 61  RSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWM 120
           RSEAEELVRGII+ FSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWL+CLEVFRWM
Sbjct: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
           KAKALVKVL YFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLR+KAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKL 420
           VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLP EAD+LFESAGNM+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420

Query: 421 LYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSD 480
           LYKAYTKAD KELLEKLLKNMDKAGIIPNKRFFLDALGTIGSS+EKPEPART+TGSRNS+
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480

Query: 481 SSVEKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 528
           SSVEKQSSSRTRSGPRNLESNVQKP SSRTRTGSRN ESGVENHAPELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 531

[Close]

BLAST of CsGy6G030070 vs. ExPASy TrEMBL
Match: A0A5D3CMK0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002480 PE=3 SV=1)

HSP 1 Score: 981 bits (2536), Expect = 0.0
Identity = 503/531 (94.73%), Postives = 514/531 (96.80%), Query Frame = 0


Query: 1   MPLSFSLQFSPTFTPSYSSS---QLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTD 60
           MPLS S QFSP FT SYSSS   QLSRLWLP+PSS+KK  STRVVC+STR SRK GVKTD
Sbjct: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRLSRKSGVKTD 60

Query: 61  RSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWM 120
           RSEAEELVRGII+ FSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWL+CLEVFRWM
Sbjct: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
           KAKALVKVL YFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLR+KAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKL 420
           VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLP EAD+LFESAGNM+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420

Query: 421 LYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSD 480
           LYKAYTKAD KELLEKLLKNMDKAGIIPNKRFFLDALGTIGSS+EKPEPART+TGSRNS+
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480

Query: 481 SSVEKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 528
           SSVEKQSSSRTRSGPRNLESNVQKP SSRTRTGSRN ESGVENHAPELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 531

[Close]

BLAST of CsGy6G030070 vs. ExPASy TrEMBL
Match: A0A1S3B2D9 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485009 PE=3 SV=1)

HSP 1 Score: 981 bits (2536), Expect = 0.0
Identity = 503/531 (94.73%), Postives = 514/531 (96.80%), Query Frame = 0


Query: 1   MPLSFSLQFSPTFTPSYSSS---QLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTD 60
           MPLS S QFSP FT SYSSS   QLSRLWLP+PSS+KK  STRVVC+STR SRK GVKTD
Sbjct: 1   MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRLSRKSGVKTD 60

Query: 61  RSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWM 120
           RSEAEELVRGII+ FSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWL+CLEVFRWM
Sbjct: 61  RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
           KAKALVKVL YFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240

Query: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLR+KAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKL 420
           VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLP EAD+LFESAGNM+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420

Query: 421 LYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSD 480
           LYKAYTKAD KELLEKLLKNMDKAGIIPNKRFFLDALGTIGSS+EKPEPART+TGSRNS+
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480

Query: 481 SSVEKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 528
           SSVEKQSSSRTRSGPRNLESNVQKP SSRTRTGSRN ESGVENHAPELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 531

[Close]

BLAST of CsGy6G030070 vs. ExPASy TrEMBL
Match: A0A6J1GGN3 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111453772 PE=3 SV=1)

HSP 1 Score: 902 bits (2330), Expect = 0.0
Identity = 461/531 (86.82%), Postives = 484/531 (91.15%), Query Frame = 0


Query: 1   MPLSFSLQFSPTFTPSYSSS---QLSRLWLPLPSSIKKAVSTRVVCISTRPSRKFGVKTD 60
           MPLSFSLQFSP+FTP  SSS   QLS+ WLPLP S+++AVSTRVVCISTRP+RK   KTD
Sbjct: 1   MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60

Query: 61  RSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLECLEVFRWM 120
           RSE EELVRG+IR FSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWL+CLEVFRWM
Sbjct: 61  RSETEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120

Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
           QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180

Query: 181 KAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
           KAKALVKVL YFEKMKGMERCKPN+VTYNILTRAFAQA KVDQVN LFKDLDES+VSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240

Query: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
           YTYNGVMDAYGKNG IKEME MLARMKSN+IKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300

Query: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
           LLRSKERPTLPTFNSMITNYGKARLRE+AEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360

Query: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKL 420
           VSKAREIFDGMVNSGK VRVSTLNAMLDVYC+NGLP+EADLLFESA +M+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420

Query: 421 LYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSQEKPEPARTRTGSRNSD 480
           LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPEPART TGSR+S+
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480

Query: 481 SSVEKQSSSRTRSGPRNLESNVQKPRSSRTRTGSRNSESGVENHAPELGLA 528
           SSVEK                   P SSR R GSR  ES V+NHAPELGLA
Sbjct: 481 SSVEK-------------------PISSRNRRGSRKLESSVKNHAPELGLA 512

[Close]

BLAST of CsGy6G030070 vs. TAIR 10
Match: AT4G39620.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 599.0 bits (1543), Expect = 3.8e-171
Identity = 303/466 (65.02%), Postives = 365/466 (78.33%), Query Frame = 0


Query: 34  KKAVSTRVVCISTRPSRKFGVK-TDRSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTE 93
           +++  TR+ C +    RK   + +   E   LVR ++   SD+EPL+KTLDKYV+V+R +
Sbjct: 39  RRSTRTRITCGAISSRRKLAERESAERENRVLVRSLMSRISDREPLVKTLDKYVKVVRCD 98

Query: 94  HCFLLFEELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSE 153
           HCFLLFEELGK DKWL+CLEVFRWMQKQRWYI DNGVYSKLIS+MGKKGQ RMAMWLFSE
Sbjct: 99  HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSE 158

Query: 154 MRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAF 213
           M+NSGCRPD SVYNALITAHLH++DKAKAL KV  Y +KMKG+ERC+PN+VTYNIL RAF
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218

Query: 214 AQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDI 273
           AQ+ KVDQVN LFKDLD S VS D+YT+NGVMDAYGKNG IKEME +L RM+SN+ KPDI
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278

Query: 274 ISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRK 333
           I+FN+LIDSYGKKQ F+KMEQ FKSL+RSKE+PTLPTFNSMI NYGKAR+ +KAE VF+K
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338

Query: 334 MKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGL 393
           M DM Y PS++T E +IMMYG+C  VS+AREIF+ +  S + ++ STLNAML+VYC NGL
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398

Query: 394 PLEADLLFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLD 453
            +EAD LF +A   RV PD++TYK LYKAYTKAD KE ++ L+K M+K GI+PNKRFFL+
Sbjct: 399 YIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLE 458

Query: 454 ALGTIGSSQEKPEPARTRTGSRNSDSSVEKQSSSRTRSGPRNLESN 499
           AL   GS           +GS N  S+     SSR+R  P+    N
Sbjct: 459 ALEVFGS-------RLPGSGSENRKST----RSSRSRDSPKGRGGN 493

[Close]

BLAST of CsGy6G030070 vs. TAIR 10
Match: AT4G39620.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 599.0 bits (1543), Expect = 3.8e-171
Identity = 303/466 (65.02%), Postives = 365/466 (78.33%), Query Frame = 0


Query: 34  KKAVSTRVVCISTRPSRKFGVK-TDRSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTE 93
           +++  TR+ C +    RK   + +   E   LVR ++   SD+EPL+KTLDKYV+V+R +
Sbjct: 39  RRSTRTRITCGAISSRRKLAERESAERENRVLVRSLMSRISDREPLVKTLDKYVKVVRCD 98

Query: 94  HCFLLFEELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSE 153
           HCFLLFEELGK DKWL+CLEVFRWMQKQRWYI DNGVYSKLIS+MGKKGQ RMAMWLFSE
Sbjct: 99  HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSE 158

Query: 154 MRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAF 213
           M+NSGCRPD SVYNALITAHLH++DKAKAL KV  Y +KMKG+ERC+PN+VTYNIL RAF
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218

Query: 214 AQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDI 273
           AQ+ KVDQVN LFKDLD S VS D+YT+NGVMDAYGKNG IKEME +L RM+SN+ KPDI
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278

Query: 274 ISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRK 333
           I+FN+LIDSYGKKQ F+KMEQ FKSL+RSKE+PTLPTFNSMI NYGKAR+ +KAE VF+K
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338

Query: 334 MKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGL 393
           M DM Y PS++T E +IMMYG+C  VS+AREIF+ +  S + ++ STLNAML+VYC NGL
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398

Query: 394 PLEADLLFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLD 453
            +EAD LF +A   RV PD++TYK LYKAYTKAD KE ++ L+K M+K GI+PNKRFFL+
Sbjct: 399 YIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLE 458

Query: 454 ALGTIGSSQEKPEPARTRTGSRNSDSSVEKQSSSRTRSGPRNLESN 499
           AL   GS           +GS N  S+     SSR+R  P+    N
Sbjct: 459 ALEVFGS-------RLPGSGSENRKST----RSSRSRDSPKGRGGN 493

[Close]

BLAST of CsGy6G030070 vs. TAIR 10
Match: AT3G06430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 163.7 bits (413), Expect = 4.0e-40
Identity = 97/352 (27.56%), Postives = 171/352 (48.58%), Query Frame = 0


Query: 100 ELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCR 159
           +L  + +WL+ LEVF  +++Q +Y    G Y KL+ ++GK GQ   A  LF EM   G  
Sbjct: 97  DLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLE 156

Query: 160 PDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVD 219
           P   +Y AL+ A+  S      +    S  +KMK   +C+P++ TY+ L +A   A++ D
Sbjct: 157 PTVELYTALLAAYTRS----NLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFD 216

Query: 220 QVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARM-KSNQIKPDIISFNLL 279
            V++L+K++DE +++ +  T N V+  YG+ G   +ME +L+ M  S   KPD+ + N++
Sbjct: 217 LVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNII 276

Query: 280 IDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGY 339
           +  +G     D ME  ++        P   TFN +I +YGK R+ +K   V   M+ + +
Sbjct: 277 LSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEF 336

Query: 340 DPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADL 399
             +  T  ++I  +            FD M + G +    T   +++ Y   GL  +   
Sbjct: 337 PWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVIS 396

Query: 400 LFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFF 451
             + A    +  ++  Y  +  A  KAD    +E++   M +   + + R F
Sbjct: 397 SVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTF 444

[Close]

BLAST of CsGy6G030070 vs. TAIR 10
Match: AT3G53170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 157.5 bits (397), Expect = 2.9e-38
Identity = 99/359 (27.58%), Postives = 171/359 (47.63%), Query Frame = 0


Query: 99  EELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGC 158
           +E  K ++W   L++F  ++KQ WY      Y+KL  ++G   Q   A  LF  M + G 
Sbjct: 116 DEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGL 175

Query: 159 RPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKV 218
           +P   VY +LI+ +     K++ L K  S  E MK +  CKP++ T+ +L     +  + 
Sbjct: 176 KPTIDVYTSLISVY----GKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRF 235

Query: 219 DQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARM-KSNQIKPDIISFNL 278
           D V ++  ++    V     TYN ++D YGK G  +EME +LA M +     PD+ + N 
Sbjct: 236 DLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNS 295

Query: 279 LIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMG 338
           +I SYG  +   KME  +        +P + TFN +I ++GKA + +K   V   M+   
Sbjct: 296 IIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRF 355

Query: 339 YDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEAD 398
           +  + VT   +I  +G    + K  ++F  M   G +    T  ++++ Y   GL ++ D
Sbjct: 356 FSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKID 415

Query: 399 LLFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGT 457
            +     N  V  D+  +  +  AY +A     +++L   M++    P+K  F   + T
Sbjct: 416 SVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKT 470

[Close]

BLAST of CsGy6G030070 vs. TAIR 10
Match: AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 156.4 bits (394), Expect = 6.5e-38
Identity = 103/353 (29.18%), Postives = 165/353 (46.74%), Query Frame = 0


Query: 106 KWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVY 165
           +W   ++VF  +++Q WY  + G+Y KLI ++GK  Q   A  LF EM N GC  +  VY
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188

Query: 166 NALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLF 225
            AL++A+     ++       +  E+MK    C+P++ TY+IL ++F Q    D+V  L 
Sbjct: 189 TALVSAY----SRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLL 248

Query: 226 KDLDESVVSADIYTYNGVMDAYGK------------------------------------ 285
            D+    +  +  TYN ++DAYGK                                    
Sbjct: 249 SDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGG 308

Query: 286 NGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPT 345
           NG I+ ME    + +S+ I+P+I +FN+L+DSYGK   + KM  V + + +     T+ T
Sbjct: 309 NGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVT 368

Query: 346 FNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMV 405
           +N +I  +G+A   ++ E +FR M+     PS VT  SL+  YG      K   +   + 
Sbjct: 369 YNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIE 428

Query: 406 NSGKEVRVSTLNAMLDVYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYKAY 423
           NS   + +   N ++D Y       E   + E        PD  TY+ + KAY
Sbjct: 429 NSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477

The following BLAST results are available for this feature:

BLAST of CsGy6G030070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SV96	5.3e-170	65.02	Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidop...	[more]
A7LN87	5.9e-169	64.71	Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4...	[more]
A3ABE1	2.9e-168	66.82	Pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic OS=Oryza...	[more]
Q9SQU6	5.7e-39	27.56	Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidop...	[more]
Q9SCP4	3.1e-37	27.89	Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX...	[more]

BLAST of CsGy6G030070 vs. NCBI nr


Match Name	Identity	Description
XP_004143565.1	100.00	pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic [Cucumis...	[more]
KAA0036266.1	94.73	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008440667.1	94.73	PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic ...	[more]
XP_023543919.1	87.19	pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita ...	[more]
KAG7034169.1	87.19	Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosper...	[more]

BLAST of CsGy6G030070 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A0A0KGV8	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501290 PE=3 SV=1	[more]
A0A5A7T266	94.73	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3CMK0	94.73	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B2D9	94.73	pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucumis ...	[more]
A0A6J1GGN3	86.82	pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucurbit...	[more]

BLAST of CsGy6G030070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39620.1	3.8e-171	65.02	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G39620.2	3.8e-171	65.02	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G06430.1	4.0e-40	27.56	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53170.1	2.9e-38	27.58	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G48730.1	6.5e-38	29.18	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 527..528
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 462..518
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 458..528
None	No IPR available	PANTHER	PTHR47874:SF3	BNAA01G05620D PROTEIN	coord: 33..474
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 309..341 e-value: 2.5E-7 score: 28.4 coord: 273..306 e-value: 1.7E-5 score: 22.7 coord: 238..272 e-value: 1.4E-8 score: 32.4 coord: 129..162 e-value: 2.8E-5 score: 22.0
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 379..401 e-value: 0.0066 score: 16.6 coord: 343..372 e-value: 0.01 score: 16.0 coord: 309..337 e-value: 2.3E-6 score: 27.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 224..284 e-value: 7.2E-11 score: 42.0 coord: 149..212 e-value: 1.9E-9 score: 37.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 236..270 score: 11.662881
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 411..445 score: 9.350046
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 271..305 score: 10.128299
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 306..340 score: 11.575191
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 126..160 score: 11.443655
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 304..516 e-value: 4.8E-30 score: 107.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 231..300 e-value: 6.0E-16 score: 60.5 coord: 60..230 e-value: 5.0E-36 score: 126.0
IPR044179	Pentatricopeptide repeat-containing protein PPR5-like	PANTHER	PTHR47874	EXPRESSED PROTEIN	coord: 33..474

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G030070.2	CsGy6G030070.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding