Sequences
The following sequences are available for this feature:
Legend: polypeptide exon CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAACGGCTCTTTTCCTCTGGATAATCAGGACGTAGTTTTAGCCCTTGAAAATTCGGAAAATTATCTGAAACGAACGACTCGAGAAATGTGGAGTGCAGAATTTACAAG GAAAGAACAAGGCTGCTGCCAAATAAATCGACTACGGAAAGAAGAAGACGACAAGAAAGGGCGGATTCGAGCTGATTCTCTTACTTAG
ATGATCAACGGCTCTTTTCCTCTGGATAATCAGGACGTAGTTTTAGCCCTTGAAAATTCGGAAAATTATCTGAAACGAACGACTCGAGAAATGTGGAGTGCAGAATTTACAAGGAAAGAACAAGGCTGCTGCCAAATAAATCGACTACGGAAAGAAGAAGACGACAAGAAAGGGCGGATTCGAGCTGATTCTCTTACTTAG
ATGATCAACGGCTCTTTTCCTCTGGATAATCAGGACGTAGTTTTAGCCCTTGAAAATTCGGAAAATTATCTGAAACGAACGACTCGAGAAATGTGGAGTGCAGAATTTACAAGGAAAGAACAAGGCTGCTGCCAAATAAATCGACTACGGAAAGAAGAAGACGACAAGAAAGGGCGGATTCGAGCTGATTCTCTTACTTAG
MINGSFPLDNQDVVLALENSENYLKRTTREMWSAEFTRKEQGCCQINRLRKEEDDKKGRIRADSLT*
Homology
BLAST of CsGy6G030050 vs. NCBI nr
Match:
KGN48786.1 (hypothetical protein Csa_003520 [Cucumis sativus])
HSP 1 Score: 135 bits (340), Expect = 5.73e-40
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0
BLAST of CsGy6G030050 vs. NCBI nr
Match:
KAA0036268.1 (hypothetical protein E6C27_scaffold18G00670 [Cucumis melo var. makuwa] >TYK12662.1 hypothetical protein E5676_scaffold255G002500 [Cucumis melo var. makuwa])
HSP 1 Score: 47.4 bits (111), Expect = 4.49e-04
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0
BLAST of CsGy6G030050 vs. ExPASy TrEMBL
Match:
A0A0A0KM13 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501270 PE=4 SV=1)
HSP 1 Score: 135 bits (340), Expect = 2.77e-40
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0
BLAST of CsGy6G030050 vs. ExPASy TrEMBL
Match:
A0A5A7T0B0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002500 PE=4 SV=1)
HSP 1 Score: 47.4 bits (111), Expect = 2.18e-04
Identity = 23/27 (85.19%), Postives = 24/27 (88.89%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
KGN48786.1 5.73e-40 100.00 hypothetical protein Csa_003520 [Cucumis sativus] [more] KAA0036268.1 4.49e-04 85.19 hypothetical protein E6C27_scaffold18G00670 [Cucumis melo var. makuwa] >TYK12662... [more]
Match Name E-value Identity Description
A0A0A0KM13 2.77e-40 100.00 Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501270 PE=4 SV=1 [more] A0A5A7T0B0 2.18e-04 85.19 Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
A T G A T C A A C G G C T C T T T T C C T C T G G A T A A T C A G G A C G T A G T T T T A G C C C T T G A A A A T T C G G A A A A T T A T C T G A A A C G A A C G A C T C G A G A A A T G T G G A G T G C A G A A T T T A C A A G G A A A G A A C A A G G C T G C T G C C A A A T A A A T C G A C T A C G G A A A G A A G A A G A C G A C A A G A A A G G G C G G A T T C G A G C T G A T T C T C T T A C T T A G 20 40 60 80 100 120 140 160 180 200 Score = Sequence Coil
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 65..66
Relationships
The following mRNA feature(s) are a part of this gene:
