CsGy6G028800 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G028800
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionEpidermal patterning factor-like protein
LocationGy14Chr6: 27616247 .. 27617807 (+)
RNA-Seq ExpressionCsGy6G028800
SyntenyCsGy6G028800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATATGGCGTGATTAGGTGGAAGTGTTCAGAAACAAAATCAGAACGAAACTCACAAGAAAACCCAAATTCCGAAACTTAAAACCAAAACAATTAACAAATCTCTCTGTTTCTTTTTTTTTTTTTCTTTTAGAGAAGAAAGAGAAACGAAAACGATATATCCCACTCTCTCACTCTGCTGCCATTGCAAAATTTGGTCTGATCTTTTTTTATTTATTTTTATTTTTTTACCATTGGCCTTCTTCTTTTTTCTCTTCTCTATCATCAATTATTTTTATTACAATTGCAAAATTTACAACCCCCTTTTCCCAGCAATTTTATTTTTCTGTTGGGTTATGGTTTCTGGAGGCTCTTCTTTCGAGTTCTGAACTTTTTGGTACTCTCTCTTTCTTTCTTTTTCTTTGTCTTCCACGTTCCATCATCTCAAATATCTCTCCCAGACTAACACAGATTCAGACCAAATTATATATATATTATATACACGTACGAGCAGTATAGAGTGCAAATTCAGAAGCTAATCTCCATCCATTCTGATTTAACTCACACTTCATTCCTTCACCCATACTTTTTCTTTTTTGCTTTCTATCTGAGAACCTTTTTTCGCTTAGTTTTATTTTAAACCTCCTCTTCTCTAGGGAGAATTTCCCTGTCTCTTTCACATTCTGGCTTCTCTTTCTCTCTCTTTGTGAGAAGAAAAGGAAAAAGAAAAAGAAAAAAAAAAAGAATGGGGTGTGAGTGTATCAACAATGGCGTCATTGGCCGGCGCAGCAGGATAATCTTATGTCCGATTGTTTCTCTTCTCTTTTTTCTGATTTTGGCATCGACCCAGATGAGATTCATGGCTGAAGGTAAATGGGTATCTTTTGAATTTTCAGAACAGAGTTCAAAACTATATTTTTATTCTTCAATTTCGTTTTTTGTTTAACCGAGTTGTTTTTCTTATCTTTGCAGGAAGATTTATTTCAAGGAACGGCAAGGTCAGTTCAGAAACCATCTCATTTCTTCCTTTCTCTAATGCTTTACTGTTTTTTTGTGAAAGCTTAATTGATTGAGAAGAATAATTTTGGGTTTTTTTTTGGTGGATTGTTGGGATAGACAGTGAATAATAGTGAAGACAAAATGGTATTGAGAGGACAAATTGGGTCAAGGCCACCAAAATGTGAGAGAAGATGTAGTTGGTGTGGTCATTGTGAAGCCATCCAAGTTCCAGCAAATCCACAAAAATCAGGAACTAAAAACTCCTCAACAATGAAGAACATAGCTTATGCTAGAGATGAAGCCTCCAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAATCCTTAAACACCCTTCCTCCACTAATCTCTTTCTCTGTAAATTAGTGATTATCATTATATATATGATTGTTAATTTCTTCAACTTAACATCTCCCATTTCTCCCTCACTCTCTCGTTTTAGTTAGATAACGAAGAGTACTATGATTGAATTGAACTTGGTTTCTTACTTCCATATTGTTGTTGGTCTCAAATTGGTTAATTGAATTGGAGATAGAAAAGAAAGTTGGTG

mRNA sequence

GATATGGCGTGATTAGGTGGAAGTGTTCAGAAACAAAATCAGAACGAAACTCACAAGAAAACCCAAATTCCGAAACTTAAAACCAAAACAATTAACAAATCTCTCTGTTTCTTTTTTTTTTTTTCTTTTAGAGAAGAAAGAGAAACGAAAACGATATATCCCACTCTCTCACTCTGCTGCCATTGCAAAATTTGGTCTGATCTTTTTTTATTTATTTTTATTTTTTTACCATTGGCCTTCTTCTTTTTTCTCTTCTCTATCATCAATTATTTTTATTACAATTGCAAAATTTACAACCCCCTTTTCCCAGCAATTTTATTTTTCTGTTGGGTTATGGTTTCTGGAGGCTCTTCTTTCGAGTTCTGAACTTTTTGGTACTCTCTCTTTCTTTCTTTTTCTTTGTCTTCCACGTTCCATCATCTCAAATATCTCTCCCAGACTAACACAGATTCAGACCAAATTATATATATATTATATACACGTACGAGCAGTATAGAGTGCAAATTCAGAAGCTAATCTCCATCCATTCTGATTTAACTCACACTTCATTCCTTCACCCATACTTTTTCTTTTTTGCTTTCTATCTGAGAACCTTTTTTCGCTTAGTTTTATTTTAAACCTCCTCTTCTCTAGGGAGAATTTCCCTGTCTCTTTCACATTCTGGCTTCTCTTTCTCTCTCTTTGTGAGAAGAAAAGGAAAAAGAAAAAGAAAAAAAAAAAGAATGGGGTGTGAGTGTATCAACAATGGCGTCATTGGCCGGCGCAGCAGGATAATCTTATGTCCGATTGTTTCTCTTCTCTTTTTTCTGATTTTGGCATCGACCCAGATGAGATTCATGGCTGAAGGAAGATTTATTTCAAGGAACGGCAAGACAGTGAATAATAGTGAAGACAAAATGGTATTGAGAGGACAAATTGGGTCAAGGCCACCAAAATGTGAGAGAAGATGTAGTTGGTGTGGTCATTGTGAAGCCATCCAAGTTCCAGCAAATCCACAAAAATCAGGAACTAAAAACTCCTCAACAATGAAGAACATAGCTTATGCTAGAGATGAAGCCTCCAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAATCCTTAAACACCCTTCCTCCACTAATCTCTTTCTCTGTAAATTAGTGATTATCATTATATATATGATTGTTAATTTCTTCAACTTAACATCTCCCATTTCTCCCTCACTCTCTCGTTTTAGTTAGATAACGAAGAGTACTATGATTGAATTGAACTTGGTTTCTTACTTCCATATTGTTGTTGGTCTCAAATTGGTTAATTGAATTGGAGATAGAAAAGAAAGTTGGTG

Coding sequence (CDS)

ATGGGGTGTGAGTGTATCAACAATGGCGTCATTGGCCGGCGCAGCAGGATAATCTTATGTCCGATTGTTTCTCTTCTCTTTTTTCTGATTTTGGCATCGACCCAGATGAGATTCATGGCTGAAGGAAGATTTATTTCAAGGAACGGCAAGACAGTGAATAATAGTGAAGACAAAATGGTATTGAGAGGACAAATTGGGTCAAGGCCACCAAAATGTGAGAGAAGATGTAGTTGGTGTGGTCATTGTGAAGCCATCCAAGTTCCAGCAAATCCACAAAAATCAGGAACTAAAAACTCCTCAACAATGAAGAACATAGCTTATGCTAGAGATGAAGCCTCCAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAATCCTTAA

Protein sequence

MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSWKCKCGSLIFNP*
Homology
[Close]
BLAST of CsGy6G028800 vs. ExPASy Swiss-Prot
Match: Q9T068 (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.2e-23
Identity = 61/118 (51.69%), Postives = 78/118 (66.10%), Query Frame = 0 

Query: 25  LLFFLILASTQMRFMAEGRFISRNGK-TVNNSED-KMVLRGQIGSRPPKCER-RCSWCGH 84
           LL  LIL ST    MA GR    + + T +  +D KM++RG IGSRPP+CER RC  CGH
Sbjct: 11  LLILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPRCERVRCRSCGH 70

Query: 85  CEAIQVPANPQ-------KSGTKNSSTMKNIAYAR-DEASNYKPMSWKCKCGSLIFNP 132
           CEAIQVP NPQ        + + +SS   ++ Y R D+++NYKPMSWKCKCG+ I+NP
Sbjct: 71  CEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

[Close]
BLAST of CsGy6G028800 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.6e-09
Identity = 29/78 (37.18%), Postives = 39/78 (50.00%), Query Frame = 0 

Query: 62  RGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTM--------KNIAYARDEAS 121
           + ++GS PP C  RC+ C  C AIQVP  P +S     +           ++    D+ S
Sbjct: 45  KARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYS 104

Query: 122 NYKPMSWKCKCGSLIFNP 132
           NYKPM WKC C    +NP
Sbjct: 105 NYKPMGWKCHCNGHFYNP 122

[Close]
BLAST of CsGy6G028800 vs. ExPASy Swiss-Prot
Match: C4B8C4 (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07
Identity = 26/71 (36.62%), Postives = 38/71 (53.52%), Query Frame = 0 

Query: 54  NSEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEAS 113
           N E+ +  R +IGS+PP CE++C  C  CEAIQ P            T+ +I +     +
Sbjct: 46  NKEEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFP------------TISSIPHLSPHYA 104

Query: 114 NYKPMSWKCKC 125
           NY+P  W+C C
Sbjct: 106 NYQPEGWRCHC 104

[Close]
BLAST of CsGy6G028800 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.7e-06
Identity = 38/125 (30.40%), Postives = 52/125 (41.60%), Query Frame = 0 

Query: 9   GVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFI-SRNGKTVNNSEDKMVLR-GQIG 68
           G   RR R +L  +V+    L L S      A+GR+I  R G  +     +   R G  G
Sbjct: 2   GTFRRRRRFLLAALVTFA-LLHLFSASSIVSADGRWIGQRTGSDLPGGFIRSNKRFGGPG 61

Query: 69  SRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSWKCKCGS 128
           S PP C  +C  C  C+ + VP  P  S                    Y P +W+CKCG+
Sbjct: 62  SSPPTCRSKCGKCQPCKPVHVPIQPGLS----------------MPLEYYPEAWRCKCGN 109

Query: 129 LIFNP 132
            +F P
Sbjct: 122 KLFMP 109

[Close]
BLAST of CsGy6G028800 vs. NCBI nr
Match: XP_004143420.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis sativus])

HSP 1 Score: 278 bits (711), Expect = 1.59e-94
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV
Sbjct: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 131
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 131

[Close]
BLAST of CsGy6G028800 vs. NCBI nr
Match: XP_008440444.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo] >KAA0036385.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo var. makuwa] >TYK12781.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 276 bits (707), Expect = 6.49e-94
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0 

Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCECINNGVIGRRSRIILCPIVSLLFFLIL STQMRFMAEGRFISRNGKTVNNSEDKMV
Sbjct: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 131
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 131

[Close]
BLAST of CsGy6G028800 vs. NCBI nr
Match: XP_038882800.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 241 bits (616), Expect = 4.47e-80
Identity = 119/131 (90.84%), Postives = 122/131 (93.13%), Query Frame = 0 

Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCEC NNGV+G RSRI LC  VSLLFFLILASTQMRFMAEGR ISRNGKTVN+ EDK+V
Sbjct: 1   MGCEC-NNGVMGSRSRI-LCSTVSLLFFLILASTQMRFMAEGRLISRNGKTVND-EDKVV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKS  KNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSAIKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 131
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 128

[Close]
BLAST of CsGy6G028800 vs. NCBI nr
Match: XP_038882801.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 231 bits (589), Expect = 5.30e-76
Identity = 115/131 (87.79%), Postives = 117/131 (89.31%), Query Frame = 0 

Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCEC NNGV+G RSRI LC  VSLLFFLILASTQMRFMAEGR ISRN     N EDK+V
Sbjct: 1   MGCEC-NNGVMGSRSRI-LCSTVSLLFFLILASTQMRFMAEGRLISRNV----NDEDKVV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKS  KNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSAIKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 131
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 125

[Close]
BLAST of CsGy6G028800 vs. NCBI nr
Match: XP_023003267.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 217 bits (553), Expect = 1.48e-70
Identity = 110/131 (83.97%), Postives = 113/131 (86.26%), Query Frame = 0 

Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCEC NNGVIGR    ILC  VS LF LILASTQMRFMAEGR IS++GKTV  SEDK+V
Sbjct: 1   MGCECNNNGVIGRCR--ILCATVSFLFLLILASTQMRFMAEGRSISKSGKTV--SEDKVV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWC HCEAIQVPANPQKS     STMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKS-----STMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 131
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 122

[Close]
BLAST of CsGy6G028800 vs. ExPASy TrEMBL
Match: A0A0A0KGK0 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G497000 PE=3 SV=1)

HSP 1 Score: 278 bits (711), Expect = 7.71e-95
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV
Sbjct: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 131
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 131

[Close]
BLAST of CsGy6G028800 vs. ExPASy TrEMBL
Match: A0A5A7T4J5 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003700 PE=3 SV=1)

HSP 1 Score: 276 bits (707), Expect = 3.14e-94
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0 

Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCECINNGVIGRRSRIILCPIVSLLFFLIL STQMRFMAEGRFISRNGKTVNNSEDKMV
Sbjct: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 131
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 131

[Close]
BLAST of CsGy6G028800 vs. ExPASy TrEMBL
Match: A0A1S3B1V9 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103484886 PE=3 SV=1)

HSP 1 Score: 276 bits (707), Expect = 3.14e-94
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0 

Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCECINNGVIGRRSRIILCPIVSLLFFLIL STQMRFMAEGRFISRNGKTVNNSEDKMV
Sbjct: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILVSTQMRFMAEGRFISRNGKTVNNSEDKMV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 131
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 131

[Close]
BLAST of CsGy6G028800 vs. ExPASy TrEMBL
Match: A0A6J1KLZ1 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111496927 PE=3 SV=1)

HSP 1 Score: 217 bits (553), Expect = 7.18e-71
Identity = 110/131 (83.97%), Postives = 113/131 (86.26%), Query Frame = 0 

Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCEC NNGVIGR    ILC  VS LF LILASTQMRFMAEGR IS++GKTV  SEDK+V
Sbjct: 1   MGCECNNNGVIGRCR--ILCATVSFLFLLILASTQMRFMAEGRSISKSGKTV--SEDKVV 60

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWC HCEAIQVPANPQKS     STMKNIAYARDEASNYKPMSW
Sbjct: 61  LRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKS-----STMKNIAYARDEASNYKPMSW 120

Query: 121 KCKCGSLIFNP 131
           KCKCGSLIFNP
Sbjct: 121 KCKCGSLIFNP 122

[Close]
BLAST of CsGy6G028800 vs. ExPASy TrEMBL
Match: A0A6J1HJ94 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463445 PE=3 SV=1)

HSP 1 Score: 218 bits (556), Expect = 1.49e-70
Identity = 112/131 (85.50%), Postives = 115/131 (87.79%), Query Frame = 0 

Query: 1   MGCECINNGVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFISRNGKTVNNSEDKMV 60
           MGCEC NNGVIGR SRI LC  VS LFFLILASTQMRFMAEGR IS++GKTV  SEDK+V
Sbjct: 55  MGCECNNNGVIGR-SRI-LCATVSFLFFLILASTQMRFMAEGRSISKSGKTV--SEDKVV 114

Query: 61  LRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSW 120
           LRGQIGSRPPKCERRCSWC HCEAIQVPANPQKS     S MKNIAYARDEASNYKPMSW
Sbjct: 115 LRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKS-----SAMKNIAYARDEASNYKPMSW 174

Query: 121 KCKCGSLIFNP 131
           KCKCGSLIFNP
Sbjct: 175 KCKCGSLIFNP 176

[Close]
BLAST of CsGy6G028800 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-24
Identity = 61/118 (51.69%), Postives = 78/118 (66.10%), Query Frame = 0 

Query: 25  LLFFLILASTQMRFMAEGRFISRNGK-TVNNSED-KMVLRGQIGSRPPKCER-RCSWCGH 84
           LL  LIL ST    MA GR    + + T +  +D KM++RG IGSRPP+CER RC  CGH
Sbjct: 11  LLILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPRCERVRCRSCGH 70

Query: 85  CEAIQVPANPQ-------KSGTKNSSTMKNIAYAR-DEASNYKPMSWKCKCGSLIFNP 132
           CEAIQVP NPQ        + + +SS   ++ Y R D+++NYKPMSWKCKCG+ I+NP
Sbjct: 71  CEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

[Close]
BLAST of CsGy6G028800 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 1.9e-10
Identity = 29/78 (37.18%), Postives = 39/78 (50.00%), Query Frame = 0 

Query: 62  RGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTM--------KNIAYARDEAS 121
           + ++GS PP C  RC+ C  C AIQVP  P +S     +           ++    D+ S
Sbjct: 45  KARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYS 104

Query: 122 NYKPMSWKCKCGSLIFNP 132
           NYKPM WKC C    +NP
Sbjct: 105 NYKPMGWKCHCNGHFYNP 122

[Close]
BLAST of CsGy6G028800 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 57.4 bits (137), Expect = 1.0e-08
Identity = 26/71 (36.62%), Postives = 38/71 (53.52%), Query Frame = 0 

Query: 54  NSEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEAS 113
           N E+ +  R +IGS+PP CE++C  C  CEAIQ P            T+ +I +     +
Sbjct: 46  NKEEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFP------------TISSIPHLSPHYA 104

Query: 114 NYKPMSWKCKC 125
           NY+P  W+C C
Sbjct: 106 NYQPEGWRCHC 104

[Close]
BLAST of CsGy6G028800 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 1.9e-07
Identity = 38/125 (30.40%), Postives = 52/125 (41.60%), Query Frame = 0 

Query: 9   GVIGRRSRIILCPIVSLLFFLILASTQMRFMAEGRFI-SRNGKTVNNSEDKMVLR-GQIG 68
           G   RR R +L  +V+    L L S      A+GR+I  R G  +     +   R G  G
Sbjct: 2   GTFRRRRRFLLAALVTFA-LLHLFSASSIVSADGRWIGQRTGSDLPGGFIRSNKRFGGPG 61

Query: 69  SRPPKCERRCSWCGHCEAIQVPANPQKSGTKNSSTMKNIAYARDEASNYKPMSWKCKCGS 128
           S PP C  +C  C  C+ + VP  P  S                    Y P +W+CKCG+
Sbjct: 62  SSPPTCRSKCGKCQPCKPVHVPIQPGLS----------------MPLEYYPEAWRCKCGN 109

Query: 129 LIFNP 132
            +F P
Sbjct: 122 KLFMP 109

The following BLAST results are available for this feature:
BLAST of CsGy6G028800 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9T0684.2e-2351.69EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q9LFT52.6e-0937.18EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
C4B8C41.4e-0736.62EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q2V3I32.7e-0630.40EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
BLAST of CsGy6G028800 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004143420.11.59e-94100.00EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis sativus][more]
XP_008440444.16.49e-9499.24PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo] >KAA0036385... [more]
XP_038882800.14.47e-8090.84EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Benincasa hispida][more]
XP_038882801.15.30e-7687.79EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Benincasa hispida][more]
XP_023003267.11.48e-7083.97EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Cucurbita maxima][more]
BLAST of CsGy6G028800 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGK07.71e-95100.00Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G497... [more]
A0A5A7T4J53.14e-9499.24Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3B1V93.14e-9499.24Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103484886... [more]
A0A6J1KLZ17.18e-7183.97Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
A0A6J1HJ941.49e-7085.50Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
BLAST of CsGy6G028800 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G37810.13.0e-2451.69unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G10310.11.9e-1037.18unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G13898.11.0e-0836.62unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot... [more]
AT4G14723.11.9e-0730.40BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF17181EPFcoord: 64..131
e-value: 5.6E-17
score: 61.5
NoneNo IPR availablePANTHERPTHR33109:SF71EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 2coord: 7..131
IPR039455EPIDERMAL PATTERNING FACTOR-like proteinPANTHERPTHR33109EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4coord: 7..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G028800.1CsGy6G028800.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010052 guard cell differentiation
biological_process GO:0010374 stomatal complex development
cellular_component GO:0005576 extracellular region
cellular_component GO:0016021 integral component of membrane