
CsGy6G028260 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGATCTGCCAATGCATCTGCCGCTGACCGGATAAAACTGCTCAGAAAGCGACTCTAAAGCGGGAAAACTTGTAAACCAAAAACAGCCACGCCACGCCACTCAACTCCGCAGCCTCAGCCTCCATGGATGATGTTAGGGCAACCTCTGCTTGGGTTGCTAGCCGCTCCTCCCATGTCCTCGTCGACTCTTCAGGTTCACTTTCCAAACCCTTATGGCTTTTGCGTTTTCTTTTTTTCTTTTTTCTGTTCGTTAATGGTGATGGTAAATGTGGGTCACTTTCTTTTGGTTTTCATACTACAGGGATTGAGAAAGTGGTGGAGACCATCGAGTCGATTCCTAAAGTTGTCTGGGATTTTGAAGGGATTCACTATTTTGATAATGGCCCATTAACCGTCCAGTACTTGTTTGTTTTGGACGCCTTGAATTTCTGTTTCTGGCCTGGTAAAATTTATCTCCCTTTTTTTTTTGTTTCAGACATGCTATTTTGTCCTTTCAATTGTTTCTTGTTGGTCGATTTTCGCTTCTCTGCGGTTCGTTCTTTATAATTTTCACTGAATACCAACCTGTGTTATTGTTAATTTCACAGCTGTTTCCTCTACGTTTGTAAATATGGTGTAGGACTCCCCTGCATGTTGAAATCTCAAGAATAAGAAATGGTTTAATTGAGCGTTATGATTTACCTCACTCGAGATCATCTATTAATCGCCCCAGATATTATTGATGGCATTGGAAACTCAAACCCAATTTTAGCAGAGTTAGAAAGATAGAAAAGCAGAGAAACAATATTTTAGCTTTTGAGATTCAATAAGATTACTCTCAAGTGTCTGATTATGTACTCCAGATTAGGTGCAAGCTTAACTGTGTATGTCACACTTCCAAAACCAGTAATGAGGTCAAAAGGGTTCAAATGTATGATATAATTGATTTAGATTTAAATGATGCAATGGAAGTTCAACTTGAGAGTCAGAGTACTCACAATTTGGCATTTGTAAAAGCCATATAAGTAACTTATATTATTCAGCATTGTAGGGAGAGACTTGAAGGGACAATGTTACTTCTTTTTCTTGCTTTATTCCATTGGCAATTTTATTTGTACGTCATGCTTATGTTTATATTGACATGTAGTGTTATAATCTAGAGAGGCAATTTAACATTGATATATTCTTCTTCACTTTTCAATTATTTTCTTGCTCTTGGCTAAAGATAAGGAATTGAGCTACGATCACTTGGCCTCGGGACTGAAGGCCGCTCTTCAAAATGACAAGTCAGCATTTGATGCTGATCGTCTGCAAAAATACACTGGTATGTGACAAATGACAAATGATATCAATAACATCCTGTCCTGATTGTGTAATTTCATTAATCACTTTATCAATGCAAATCAGGCCCTGAGTTGCGCGAACTGTTGAAATGGCCTAGACCACTTCCTTTGGAGGATGAAAGAGTTCGCTTGCTGCGTGAGGTGAAATAACTTCACATTAGTAGATTCTAGTATATGTGTATTATGGACCATATTCTTCTGACTCGCATTACTTATCCTTCAAGGAAATATATTTTTGAGATCATTCTATTTCATGTCTCAGGTTGGATGCGAACTAGAGAGAAGCTTCGAGGGTAAAGCTGCTAATATAGTGGAATCCTGTGGGAAATCAGCTGTGAAGCTTGTTGCTGTTATCACACAACACTTTCCTGGTATCAACTTTTATATAATTTTATTTAACATGTTATTTATTAGAATTAGGTGCTAATGTTAATGACAATATATTGAGATGGTCGTTTGATATGTTCATCGCCTTACATCAGGCTTTCGAGATCACTCTCTTTACAAAGGCCACCAGGTATTCCTGTACAAACGAGCTCAAATATTTGCAGCTGACCTTTGGGGTGCATTCAATGGACAAGGATATGGAGAGTTCAATGACATTGGTTCAATCACCATTATGGCAGACTACATCGTTCCTGCTGTACTTCGACAGCTTGGGGTGCTAAAATACAGTTCTACACTTGCAAGCATCATCGATGCTAACAGTGAAATTGGTCCAGGCAGCGAGGAGGAAGTAGAACTCCGAGCTTGCTCAATATATGCAGTTGAAAAAATGAGAGAATTGATTAGTATGAAATCAGGAAAACAGGTATTTCCTTATTAAATTATCTTTAGACGACTTTCACTCCATAGTTCTACTCCACTGTTGTAGGATTCAATTTTACGTCTGTAAGTATATTTACTTTCTGGCAGCTGACAAAAACCGGAAAAAATGACATATCCCATCTCTAGCCCTCTACCTTCTGCCCATGCTTTGGTTTTCCAAACTATAGAGTAAAAAGATTTGGATTTTTGCAGGTTCTAAGCGTGGAGTTAGATCTTTGGCTTTGGTCCTTTGGAATCCAGTGTCCATCACTGACACACCATCGTACTCTTTCAATTTACTATTGATTCCAACCAACATTTGATCTGATAGCTTTCTGTTATGCACCAGCCAGTTAGAGAATGGCAAAATTTTGGCGGATGATGCTCG GGATCTGCCAATGCATCTGCCGCTGACCGGATAAAACTGCTCAGAAAGCGACTCTAAAGCGGGAAAACTTGTAAACCAAAAACAGCCACGCCACGCCACTCAACTCCGCAGCCTCAGCCTCCATGGATGATGTTAGGGCAACCTCTGCTTGGGTTGCTAGCCGCTCCTCCCATGTCCTCGTCGACTCTTCAGGGATTGAGAAAGTGGTGGAGACCATCGAGTCGATTCCTAAAGTTGTCTGGGATTTTGAAGGGATTCACTATTTTGATAATGGCCCATTAACCGTCCAGTACTTGTTTGTTTTGGACGCCTTGAATTTCTGTTTCTGGCCTGATAAGGAATTGAGCTACGATCACTTGGCCTCGGGACTGAAGGCCGCTCTTCAAAATGACAAGTCAGCATTTGATGCTGATCGTCTGCAAAAATACACTGGCCCTGAGTTGCGCGAACTGTTGAAATGGCCTAGACCACTTCCTTTGGAGGATGAAAGAGTTCGCTTGCTGCGTGAGGTTGGATGCGAACTAGAGAGAAGCTTCGAGGGTAAAGCTGCTAATATAGTGGAATCCTGTGGGAAATCAGCTGTGAAGCTTGTTGCTGTTATCACACAACACTTTCCTGGCTTTCGAGATCACTCTCTTTACAAAGGCCACCAGGTATTCCTGTACAAACGAGCTCAAATATTTGCAGCTGACCTTTGGGGTGCATTCAATGGACAAGGATATGGAGAGTTCAATGACATTGGTTCAATCACCATTATGGCAGACTACATCGTTCCTGCTGTACTTCGACAGCTTGGGGTGCTAAAATACAGTTCTACACTTGCAAGCATCATCGATGCTAACAGTGAAATTGGTCCAGGCAGCGAGGAGGAAGTAGAACTCCGAGCTTGCTCAATATATGCAGTTGAAAAAATGAGAGAATTGATTAGTATGAAATCAGGAAAACAGGTATTTCCTTATTAAATTATCTTTAGACGACTTTCACTCCATAGTTCTACTCCACTGTTGTAGGATTCAATTTTACGTCTGTAAGTATATTTACTTTCTGGCAGCTGACAAAAACCGGAAAAAATGACATATCCCATCTCTAGCCCTCTACCTTCTGCCCATGCTTTGGTTTTCCAAACTATAGAGTAAAAAGATTTGGATTTTTGCAGGTTCTAAGCGTGGAGTTAGATCTTTGGCTTTGGTCCTTTGGAATCCAGTGTCCATCACTGACACACCATCGTACTCTTTCAATTTACTATTGATTCCAACCAACATTTGATCTGATAGCTTTCTGTTATGCACCAGCCAGTTAGAGAATGGCAAAATTTTGGCGGATGATGCTCG ATGGATGATGTTAGGGCAACCTCTGCTTGGGTTGCTAGCCGCTCCTCCCATGTCCTCGTCGACTCTTCAGGGATTGAGAAAGTGGTGGAGACCATCGAGTCGATTCCTAAAGTTGTCTGGGATTTTGAAGGGATTCACTATTTTGATAATGGCCCATTAACCGTCCAGTACTTGTTTGTTTTGGACGCCTTGAATTTCTGTTTCTGGCCTGATAAGGAATTGAGCTACGATCACTTGGCCTCGGGACTGAAGGCCGCTCTTCAAAATGACAAGTCAGCATTTGATGCTGATCGTCTGCAAAAATACACTGGCCCTGAGTTGCGCGAACTGTTGAAATGGCCTAGACCACTTCCTTTGGAGGATGAAAGAGTTCGCTTGCTGCGTGAGGTTGGATGCGAACTAGAGAGAAGCTTCGAGGGTAAAGCTGCTAATATAGTGGAATCCTGTGGGAAATCAGCTGTGAAGCTTGTTGCTGTTATCACACAACACTTTCCTGGCTTTCGAGATCACTCTCTTTACAAAGGCCACCAGGTATTCCTGTACAAACGAGCTCAAATATTTGCAGCTGACCTTTGGGGTGCATTCAATGGACAAGGATATGGAGAGTTCAATGACATTGGTTCAATCACCATTATGGCAGACTACATCGTTCCTGCTGTACTTCGACAGCTTGGGGTGCTAAAATACAGTTCTACACTTGCAAGCATCATCGATGCTAACAGTGAAATTGGTCCAGGCAGCGAGGAGGAAGTAGAACTCCGAGCTTGCTCAATATATGCAGTTGAAAAAATGAGAGAATTGATTAGTATGAAATCAGGAAAACAGGTATTTCCTTATTAA MDDVRATSAWVASRSSHVLVDSSGIEKVVETIESIPKVVWDFEGIHYFDNGPLTVQYLFVLDALNFCFWPDKELSYDHLASGLKAALQNDKSAFDADRLQKYTGPELRELLKWPRPLPLEDERVRLLREVGCELERSFEGKAANIVESCGKSAVKLVAVITQHFPGFRDHSLYKGHQVFLYKRAQIFAADLWGAFNGQGYGEFNDIGSITIMADYIVPAVLRQLGVLKYSSTLASIIDANSEIGPGSEEEVELRACSIYAVEKMRELISMKSGKQVFPY* Homology
BLAST of CsGy6G028260 vs. ExPASy Swiss-Prot
Match: Q54II8 (Queuosine salvage protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0288723 PE=3 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 2.9e-58 Identity = 122/277 (44.04%), Postives = 166/277 (59.93%), Query Frame = 0
BLAST of CsGy6G028260 vs. ExPASy Swiss-Prot
Match: Q1JP73 (Queuosine salvage protein OS=Bos taurus OX=9913 PE=2 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 3.1e-36 Identity = 99/296 (33.45%), Postives = 150/296 (50.68%), Query Frame = 0
BLAST of CsGy6G028260 vs. ExPASy Swiss-Prot
Match: Q5T6V5 (Queuosine salvage protein OS=Homo sapiens OX=9606 GN=C9orf64 PE=1 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 9.1e-36 Identity = 100/296 (33.78%), Postives = 147/296 (49.66%), Query Frame = 0
BLAST of CsGy6G028260 vs. ExPASy Swiss-Prot
Match: Q9HDZ9 (Queuosine salvage protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC589.05c PE=3 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 6.5e-34 Identity = 98/305 (32.13%), Postives = 148/305 (48.52%), Query Frame = 0
BLAST of CsGy6G028260 vs. ExPASy Swiss-Prot
Match: A7SNN9 (Queuosine salvage protein OS=Nematostella vectensis OX=45351 GN=v1g230591 PE=3 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.1e-33 Identity = 92/291 (31.62%), Postives = 144/291 (49.48%), Query Frame = 0
BLAST of CsGy6G028260 vs. NCBI nr
Match: XP_011657891.1 (queuosine salvage protein [Cucumis sativus] >KGN48599.1 hypothetical protein Csa_004208 [Cucumis sativus]) HSP 1 Score: 557 bits (1436), Expect = 9.65e-200 Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0
BLAST of CsGy6G028260 vs. NCBI nr
Match: XP_008440365.1 (PREDICTED: UPF0553 protein-like [Cucumis melo]) HSP 1 Score: 548 bits (1413), Expect = 3.09e-196 Identity = 271/276 (98.19%), Postives = 273/276 (98.91%), Query Frame = 0
BLAST of CsGy6G028260 vs. NCBI nr
Match: TYK12822.1 (UPF0553 protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 548 bits (1413), Expect = 4.99e-196 Identity = 271/276 (98.19%), Postives = 273/276 (98.91%), Query Frame = 0
BLAST of CsGy6G028260 vs. NCBI nr
Match: KAA0036427.1 (UPF0553 protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 547 bits (1410), Expect = 1.43e-195 Identity = 270/276 (97.83%), Postives = 273/276 (98.91%), Query Frame = 0
BLAST of CsGy6G028260 vs. NCBI nr
Match: XP_038883825.1 (queuosine salvage protein-like [Benincasa hispida]) HSP 1 Score: 535 bits (1378), Expect = 6.68e-191 Identity = 264/276 (95.65%), Postives = 269/276 (97.46%), Query Frame = 0
BLAST of CsGy6G028260 vs. ExPASy TrEMBL
Match: A0A0A0KIH4 (Queuosine salvage protein OS=Cucumis sativus OX=3659 GN=Csa_6G495040 PE=3 SV=1) HSP 1 Score: 557 bits (1436), Expect = 4.67e-200 Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0
BLAST of CsGy6G028260 vs. ExPASy TrEMBL
Match: A0A1S3B1Q0 (Queuosine salvage protein OS=Cucumis melo OX=3656 GN=LOC103484840 PE=3 SV=1) HSP 1 Score: 548 bits (1413), Expect = 1.50e-196 Identity = 271/276 (98.19%), Postives = 273/276 (98.91%), Query Frame = 0
BLAST of CsGy6G028260 vs. ExPASy TrEMBL
Match: A0A5D3CNA0 (Queuosine salvage protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004140 PE=3 SV=1) HSP 1 Score: 548 bits (1413), Expect = 2.42e-196 Identity = 271/276 (98.19%), Postives = 273/276 (98.91%), Query Frame = 0
BLAST of CsGy6G028260 vs. ExPASy TrEMBL
Match: A0A5A7T4C7 (Queuosine salvage protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18G002330 PE=3 SV=1) HSP 1 Score: 547 bits (1410), Expect = 6.92e-196 Identity = 270/276 (97.83%), Postives = 273/276 (98.91%), Query Frame = 0
BLAST of CsGy6G028260 vs. ExPASy TrEMBL
Match: A0A6J1BXI6 (Queuosine salvage protein OS=Momordica charantia OX=3673 GN=LOC111005615 PE=3 SV=1) HSP 1 Score: 531 bits (1369), Expect = 8.49e-190 Identity = 262/276 (94.93%), Postives = 270/276 (97.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|