CsGy6G027890 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G027890
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr6: 26934432 .. 26934990 (+)
RNA-Seq ExpressionCsGy6G027890
SyntenyCsGy6G027890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAATCAGAATATATATACGGTTGAAAGTAAAAGAGAGGGGTTGGGTTGGGTTGGGTTGGCCGGTGATCAAAATTGAAAATAGGAGGGAGGTGAAACGACGAGGGTTGAGGTGGCAAGCAGGATTAGACACACGTGGAATGAAGAAGAAGGGAGAAAAAGAAAAGTGGACGGTGAGGATAGAATGTAAAAAGGTGTTAATTATTGGAGGGCGGAGGCAGAGAAAGAGTTGGGAGGTGAAGCTGGTGTGCTGCGGAGCGTGAGGAACACGCTCCTCCAATGACCCTTTTCTTTTTATTAATCTTTTCAAATTTCAAATTTTTTATTTTGCTTTTCTTTTTTTTTTCCAGAAAGAAAATGAAAAACAAAAAAAAAGTGATTTTTGTTATAAAAATGAATGCAGGTAAAAACACGACGCGTGTTGAAAGCCAGCTGTATCGCAACCGCAACGTCCAACCGCTTACTTGGGAGAAGCGGTGCCACTTACCGGAACGTTTGTCATTTCCATTTAAACCAGCCCACCGGCTGAGTAAGTTGCCCGTTTCATCTCTTTTATAA

mRNA sequence

ATGAGAATCAGAATATATATACGGTTGAAAGTAAAAGAGAGGGGTTGGGTTGGGTTGGGTTGGCCGGTGATCAAAATTGAAAATAGGAGGGAGGTGAAACGACGAGGGTTGAGGTGGCAAGCAGGATTAGACACACGTGGAATGAAGAAGAAGGGAGAAAAAGAAAAGTGGACGGTGAGGATAGAATGTAAAAAGGTGTTAATTATTGGAGGGCGGAGGCAGAGAAAGAGTTGGGAGGTGAAGCTGAAAGAAAATGAAAAACAAAAAAAAAGTAAAAACACGACGCGTGTTGAAAGCCAGCTGTATCGCAACCGCAACGTCCAACCGCTTACTTGGGAGAAGCGGTGCCACTTACCGGAACGTTTGTCATTTCCATTTAAACCAGCCCACCGGCTGAGTAAGTTGCCCGTTTCATCTCTTTTATAA

Coding sequence (CDS)

ATGAGAATCAGAATATATATACGGTTGAAAGTAAAAGAGAGGGGTTGGGTTGGGTTGGGTTGGCCGGTGATCAAAATTGAAAATAGGAGGGAGGTGAAACGACGAGGGTTGAGGTGGCAAGCAGGATTAGACACACGTGGAATGAAGAAGAAGGGAGAAAAAGAAAAGTGGACGGTGAGGATAGAATGTAAAAAGGTGTTAATTATTGGAGGGCGGAGGCAGAGAAAGAGTTGGGAGGTGAAGCTGAAAGAAAATGAAAAACAAAAAAAAAGTAAAAACACGACGCGTGTTGAAAGCCAGCTGTATCGCAACCGCAACGTCCAACCGCTTACTTGGGAGAAGCGGTGCCACTTACCGGAACGTTTGTCATTTCCATTTAAACCAGCCCACCGGCTGAGTAAGTTGCCCGTTTCATCTCTTTTATAA

Protein sequence

MRIRIYIRLKVKERGWVGLGWPVIKIENRREVKRRGLRWQAGLDTRGMKKKGEKEKWTVRIECKKVLIIGGRRQRKSWEVKLKENEKQKKSKNTTRVESQLYRNRNVQPLTWEKRCHLPERLSFPFKPAHRLSKLPVSSLL*
Homology
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BLAST of CsGy6G027890 vs. NCBI nr
Match: KAE8647504.1 (hypothetical protein Csa_023542, partial [Cucumis sativus])

HSP 1 Score: 104 bits (260), Expect = 1.09e-26
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 92  KNTTRVESQLYRNRNVQPLTWEKRCHLPERLSFPFKPAHRLSKLPVSSLL 141
           KNTTRVESQLYRNRNVQPLTWEKRCHLPERLSFPFKPAHRLSKLPVSSLL
Sbjct: 1   KNTTRVESQLYRNRNVQPLTWEKRCHLPERLSFPFKPAHRLSKLPVSSLL 50

The following BLAST results are available for this feature:
BLAST of CsGy6G027890 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G027890 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647504.11.09e-26100.00hypothetical protein Csa_023542, partial [Cucumis sativus][more]
BLAST of CsGy6G027890 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsGy6G027890 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G027890.1CsGy6G027890.1mRNA