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CsGy6G026910 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTGAAAAATATGAGATAGTAAGAATTTGATGAAGACTGAAGATACCTTTTGAAGTTCATAAATCAGATAGAGATTACACGCAAATTAAAACTTATTACACTTTTTGAAGATGAGGGAAAGAATTAAATGCATGAAATACTAAAGATAGAGCTCATGGAGAATTAAATGGCCAATGAAAAGGAAAAATTAGAAGTAAGGATATGAATATAGGATAGGAGATGGACCAAGTAAGCTGAGAATTTGGGTGAGACAGTCAAACGCAAAACTAATCTGATCCGAAACTTCATACCCTTTTTTTTTTCATTCTCTAACACTAACTCTGCTGAAAACAAGGAGCCTGACCAATCCCCGTTACATTTTCCTATTACCTAGTTCTTCTCGATTTTTTGAACTATAAAAATGCATTCCAGGTGTTTGTATAAATGCCGCACAGGCTCTTGTTTCCCAAAGCTTTCTCATTTTTCGTTTCCTTGTAGACCCAGAAGCAAAAATGGGGAGGATGGCGTATTTGGCTCTCAATAGTGATCCTCTAATGGAGGAGTTGATTAATTCTGATATCCATGAGCTTAAAATTGCAGCCACTAGGCTTCTTGAACATGCCACCAAGCTCGGTGGAAAGGGTCTTGGCACTTCCTTTTTTAAATGGCTTGCTTCCTTTGCTGCCATGTGGGTGCTTTATTTCTAATATAAGGGCTTTTGTTTTGTTTCTGACATTCTAAAATTTAACATCATTATGCAGTTACCTGTTGATTTTGGATCGTACGAACTGGAGAACAAATATGCTTACTTCACTTCTTGTCCCTTACATTTTCTTCAGTCTTCCTCAAGGGATTTTTAACTTACTGAGGTGATACTCACTCTGTGTTCCTTGTTGGTTTAATTTTTAAGCTTTATCCAAAGGTATTTCAATGTTAACTAATATTGTGTTTATTCTTGATTTTCTTAAGAGGGGATGCTGGGAAATGGATTGCCTTCGTTGCAGTGGTATTGAGGCTCTTCTTTCCGCGACATTTCCCAGGTAAGCACCATGGTTATTTGTTTACTTTTTCACCACTTTTCTTGTCGATCGGTATCCTGTCGCTGTGTATGATGAAAGGTTGTTTTGAATTTATAATACATTTCAATCATTAACTACAAAAAGGCATTTGTCAATCAGTACAACCTTGTATTTGTTGAGGTGACATGATGAATTATTTAAACTCGGCGTAGCGAGTGCTTGATAGAGAACGTGGCTTTGATACTTGACATAATAATGCAAGAAAAAGCTTCAGGTTTAAAAATGTTTTTCCTCCCTCTAAACTTTTGATCATTTTGCCTCTTTTGACTTGTAATCTCTCCTATTATGATCTAAGAGATCATGTTTGATAATCATTTGGTTTTTTTTCTTTTCTTTTTTAAGATTAAGCCTATAAACACTCGTTCTCTTTCTAAACATTTACTTTCTACTTTGTACCAATGTTTTTAAAAATCAAGCCAAGTTTTGAAAAGTAAAAAAAAAAAAAAGAAAAATTGTTTTTAAAATTTGACTAAGAATTAACTCTTTTACTTTAAAAAGATGCAAACCAGTATGAAAGTTATGGGTGAAAATAGCTTTAATTTTTAAAAACTATTAACCAAACGAGACATTAACTTACAGAAACACATTTTCAAATTTGAAGCACTGCTGATCTTGGTCAATGTGAGTGATATGTCACAGGCAGTTGAGCTATACTTAACTCGGTCATATCTTCAATAGTTCGTTACAACAAAAAAAAATGAATTGAAGTTGGTTTTTGCAGATTGGTTGGAGATTCCAGGGTCATTGATTCTGCTTCTAGTGGCAACACCAGGGTTCTTTGCACATACATTGAGAGACCACTGGGCTGGGGTAGTGATATGTTTGATAATTGGATGTTACCTTCTCCAAGAGCACATTCGTGCATCTGGTGGCTTCAGAAACTCTCTTACTCAAACTCATGGAATTTCCAATACCATTGGAATCATCCTCCTCCTTGTGTTCCCTGTTTGGGCCATGGTTGCTCGTTTCTTCTAGCTCTCTATACAGCTCTCTCCCTTCC ATTTTGAAAAATATGAGATAGTAAGAATTTGATGAAGACTGAAGATACCTTTTGAAGTTCATAAATCAGATAGAGATTACACGCAAATTAAAACTTATTACACTTTTTGAAGATGAGGGAAAGAATTAAATGCATGAAATACTAAAGATAGAGCTCATGGAGAATTAAATGGCCAATGAAAAGGAAAAATTAGAAGTAAGGATATGAATATAGGATAGGAGATGGACCAAGTAAGCTGAGAATTTGGGTGAGACAGTCAAACGCAAAACTAATCTGATCCGAAACTTCATACCCTTTTTTTTTTCATTCTCTAACACTAACTCTGCTGAAAACAAGGAGCCTGACCAATCCCCGTTACATTTTCCTATTACCTAGTTCTTCTCGATTTTTTGAACTATAAAAATGCATTCCAGGTGTTTGTATAAATGCCGCACAGGCTCTTGTTTCCCAAAGCTTTCTCATTTTTCGTTTCCTTGTAGACCCAGAAGCAAAAATGGGGAGGATGGCGTATTTGGCTCTCAATAGTGATCCTCTAATGGAGGAGTTGATTAATTCTGATATCCATGAGCTTAAAATTGCAGCCACTAGGCTTCTTGAACATGCCACCAAGCTCGGTGGAAAGGGTCTTGGCACTTCCTTTTTTAAATGGCTTGCTTCCTTTGCTGCCATTTACCTGTTGATTTTGGATCGTACGAACTGGAGAACAAATATGCTTACTTCACTTCTTGTCCCTTACATTTTCTTCAGTCTTCCTCAAGGGATTTTTAACTTACTGAGAGGGGATGCTGGGAAATGGATTGCCTTCGTTGCAGTGGTATTGAGGCTCTTCTTTCCGCGACATTTCCCAGATTGGTTGGAGATTCCAGGGTCATTGATTCTGCTTCTAGTGGCAACACCAGGGTTCTTTGCACATACATTGAGAGACCACTGGGCTGGGGTAGTGATATGTTTGATAATTGGATGTTACCTTCTCCAAGAGCACATTCGTGCATCTGGTGGCTTCAGAAACTCTCTTACTCAAACTCATGGAATTTCCAATACCATTGGAATCATCCTCCTCCTTGTGTTCCCTGTTTGGGCCATGGTTGCTCGTTTCTTCTAGCTCTCTATACAGCTCTCTCCCTTCC ATGGGGAGGATGGCGTATTTGGCTCTCAATAGTGATCCTCTAATGGAGGAGTTGATTAATTCTGATATCCATGAGCTTAAAATTGCAGCCACTAGGCTTCTTGAACATGCCACCAAGCTCGGTGGAAAGGGTCTTGGCACTTCCTTTTTTAAATGGCTTGCTTCCTTTGCTGCCATTTACCTGTTGATTTTGGATCGTACGAACTGGAGAACAAATATGCTTACTTCACTTCTTGTCCCTTACATTTTCTTCAGTCTTCCTCAAGGGATTTTTAACTTACTGAGAGGGGATGCTGGGAAATGGATTGCCTTCGTTGCAGTGGTATTGAGGCTCTTCTTTCCGCGACATTTCCCAGATTGGTTGGAGATTCCAGGGTCATTGATTCTGCTTCTAGTGGCAACACCAGGGTTCTTTGCACATACATTGAGAGACCACTGGGCTGGGGTAGTGATATGTTTGATAATTGGATGTTACCTTCTCCAAGAGCACATTCGTGCATCTGGTGGCTTCAGAAACTCTCTTACTCAAACTCATGGAATTTCCAATACCATTGGAATCATCCTCCTCCTTGTGTTCCCTGTTTGGGCCATGGTTGCTCGTTTCTTCTAG MGRMAYLALNSDPLMEELINSDIHELKIAATRLLEHATKLGGKGLGTSFFKWLASFAAIYLLILDRTNWRTNMLTSLLVPYIFFSLPQGIFNLLRGDAGKWIAFVAVVLRLFFPRHFPDWLEIPGSLILLLVATPGFFAHTLRDHWAGVVICLIIGCYLLQEHIRASGGFRNSLTQTHGISNTIGIILLLVFPVWAMVARFF* Homology
BLAST of CsGy6G026910 vs. ExPASy Swiss-Prot
Match: Q9SVL6 (Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=COR413PM2 PE=2 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 3.7e-79 Identity = 143/201 (71.14%), Postives = 163/201 (81.09%), Query Frame = 0
BLAST of CsGy6G026910 vs. ExPASy Swiss-Prot
Match: O23164 (Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g37220 PE=2 SV=2) HSP 1 Score: 254.2 bits (648), Expect = 1.2e-66 Identity = 118/202 (58.42%), Postives = 149/202 (73.76%), Query Frame = 0
BLAST of CsGy6G026910 vs. ExPASy Swiss-Prot
Match: Q9XIM7 (Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=COR413PM1 PE=2 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 4.7e-66 Identity = 119/189 (62.96%), Postives = 146/189 (77.25%), Query Frame = 0
BLAST of CsGy6G026910 vs. ExPASy Swiss-Prot
Match: O64834 (Cold-regulated 413 plasma membrane protein 3 OS=Arabidopsis thaliana OX=3702 GN=At2g23680 PE=2 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.2e-34 Identity = 76/184 (41.30%), Postives = 113/184 (61.41%), Query Frame = 0
BLAST of CsGy6G026910 vs. ExPASy Swiss-Prot
Match: F4I1G5 (Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM2 PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.1e-10 Identity = 45/181 (24.86%), Postives = 90/181 (49.72%), Query Frame = 0
BLAST of CsGy6G026910 vs. NCBI nr
Match: XP_004142025.1 (cold-regulated 413 plasma membrane protein 2 [Cucumis sativus] >KGN48465.1 hypothetical protein Csa_002903 [Cucumis sativus]) HSP 1 Score: 410 bits (1054), Expect = 1.70e-144 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
BLAST of CsGy6G026910 vs. NCBI nr
Match: XP_008440182.1 (PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis melo] >XP_008440183.1 PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis melo] >TYK12936.1 cold-regulated 413 plasma membrane protein 2-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 405 bits (1040), Expect = 2.32e-142 Identity = 197/202 (97.52%), Postives = 200/202 (99.01%), Query Frame = 0
BLAST of CsGy6G026910 vs. NCBI nr
Match: XP_038883183.1 (cold-regulated 413 plasma membrane protein 2-like [Benincasa hispida]) HSP 1 Score: 402 bits (1034), Expect = 1.91e-141 Identity = 196/202 (97.03%), Postives = 202/202 (100.00%), Query Frame = 0
BLAST of CsGy6G026910 vs. NCBI nr
Match: XP_022133246.1 (cold-regulated 413 plasma membrane protein 2-like [Momordica charantia]) HSP 1 Score: 387 bits (995), Expect = 1.69e-135 Identity = 189/202 (93.56%), Postives = 196/202 (97.03%), Query Frame = 0
BLAST of CsGy6G026910 vs. NCBI nr
Match: XP_023002994.1 (cold-regulated 413 plasma membrane protein 2 [Cucurbita maxima]) HSP 1 Score: 378 bits (971), Expect = 1.68e-131 Identity = 182/202 (90.10%), Postives = 195/202 (96.53%), Query Frame = 0
BLAST of CsGy6G026910 vs. ExPASy TrEMBL
Match: A0A0A0KFI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G488350 PE=3 SV=1) HSP 1 Score: 410 bits (1054), Expect = 8.24e-145 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
BLAST of CsGy6G026910 vs. ExPASy TrEMBL
Match: A0A1S3B0J4 (cold-regulated 413 plasma membrane protein 2-like OS=Cucumis melo OX=3656 GN=LOC103484724 PE=3 SV=1) HSP 1 Score: 405 bits (1040), Expect = 1.12e-142 Identity = 197/202 (97.52%), Postives = 200/202 (99.01%), Query Frame = 0
BLAST of CsGy6G026910 vs. ExPASy TrEMBL
Match: A0A5D3CRA7 (Cold-regulated 413 plasma membrane protein 2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005310 PE=3 SV=1) HSP 1 Score: 405 bits (1040), Expect = 1.12e-142 Identity = 197/202 (97.52%), Postives = 200/202 (99.01%), Query Frame = 0
BLAST of CsGy6G026910 vs. ExPASy TrEMBL
Match: A0A6J1BUH1 (cold-regulated 413 plasma membrane protein 2-like OS=Momordica charantia OX=3673 GN=LOC111005887 PE=3 SV=1) HSP 1 Score: 387 bits (995), Expect = 8.17e-136 Identity = 189/202 (93.56%), Postives = 196/202 (97.03%), Query Frame = 0
BLAST of CsGy6G026910 vs. ExPASy TrEMBL
Match: A0A6J1KS22 (cold-regulated 413 plasma membrane protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111496737 PE=3 SV=1) HSP 1 Score: 378 bits (971), Expect = 8.16e-132 Identity = 182/202 (90.10%), Postives = 195/202 (96.53%), Query Frame = 0
BLAST of CsGy6G026910 vs. TAIR 10
Match: AT3G50830.1 (cold-regulated 413-plasma membrane 2 ) HSP 1 Score: 295.8 bits (756), Expect = 2.6e-80 Identity = 143/201 (71.14%), Postives = 163/201 (81.09%), Query Frame = 0
BLAST of CsGy6G026910 vs. TAIR 10
Match: AT4G37220.1 (Cold acclimation protein WCOR413 family ) HSP 1 Score: 254.2 bits (648), Expect = 8.7e-68 Identity = 118/202 (58.42%), Postives = 149/202 (73.76%), Query Frame = 0
BLAST of CsGy6G026910 vs. TAIR 10
Match: AT2G15970.1 (cold regulated 413 plasma membrane 1 ) HSP 1 Score: 252.3 bits (643), Expect = 3.3e-67 Identity = 119/189 (62.96%), Postives = 146/189 (77.25%), Query Frame = 0
BLAST of CsGy6G026910 vs. TAIR 10
Match: AT2G15970.2 (cold regulated 413 plasma membrane 1 ) HSP 1 Score: 181.8 bits (460), Expect = 5.5e-46 Identity = 87/147 (59.18%), Postives = 107/147 (72.79%), Query Frame = 0
BLAST of CsGy6G026910 vs. TAIR 10
Match: AT2G23680.1 (Cold acclimation protein WCOR413 family ) HSP 1 Score: 147.9 bits (372), Expect = 8.8e-36 Identity = 76/184 (41.30%), Postives = 113/184 (61.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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