CsGy6G026740 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G026740
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	E3 ubiquitin-protein ligase RNF185
Location	Gy14Chr6: 26217252 .. 26219731 (+)
RNA-Seq Expression	CsGy6G026740
Synteny	CsGy6G026740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGGCTTCATACTTCATAGGACGACCTAACTTACACGTTGTTATCCCTCGACTAAGAAATATAGAAAATCTAAAAAATAAACAAATCCCTTCAAGTTGAATCCTTCGTATCCTCTTCATCTTCATCTTTTTCTTCTTCTTCTTCTTCTTCCTCCCATTCTACTCTCTTCTACGCCTTTCTTTAATCTCTCTACCTTCTCAATTCCACGGATTCCTGTTTTTCATCCCCACCAACAACCATTCTCCTTTCTAACCCTTTCCCATTCTCTTTCTCTCACAGGTCCGTTCACTCTCTTCTCTTTATTAATTTCCGTTTTGTTTCATTCCTTTCTGATTCCGATTTTGGGGCTTTTTTCTCCCTGATTTTATTCTTTCTTTCTTTCTTTCTTTATTTTTTTACAATCATCGGATTTTTTGTTGCGGCTTCTTTTGCTTGATCTTGATGTGAACTTGTGTTGAATCTTATTTTCATTTTGTTTTGTTTTGCGATTTGTGGTGATTAATAGCTGCTGATATTTTGTGGGGTTCACTCAGAAATGGCGAATGAGTTTGGTGAATCAACGAGTATGCCACATCAAAACCCATCTTGCTCTACTAATAGTGATACTACTAATAATAATGATACTGGTGATTTTGAATGCAATATTTGCTTTGAGTTAGCTCAAGACCCGATTATTACTCTTTGTGGTCATCTCTTTTGCTGGCCTTGTTTATATAGATGGCTGCATCATCACTCACAATGTCAAGAATGTCCTGTTTGTAAGGCTCTTATTCAAGAGGAAAAGTTGGTTCCTCTTTATGGTAGGGGTAAAATACCATCTGATCCAAGATTAAATACATATCCTGGTCTTGATATTCCAAATCGTCCTGCTGGTCAAAGGCCTCAAACGGCACCACCTCCGGTTCCTAACAATTTTCCGAACTATGGATTTGGATTCGCTGGTGGCTTTATGCCAATGGCATCGGCAAGAATTGGCAATTTCACTTTAGCTACTGCTTTTGGTGGTCTGATCCCATCTTTATTCAATATCCAGTTTCATGGATTTCCTGATGCTACTGTTTATGGAACTACTTCTGGTTACCCTTATGCATTCAACACCTTTCATGGAGGTCATGGTCACCATTTTCCGCAACCGTCCACTCGAGGTCAGCATGCTGATAACGTACTGAAAAACCTTCTTTTACTTGTTGGTGTATTTGTAATTCTTGCCTTGCTCTGGTGGTAGAAGATAATGTTTGACTTCAATGGAAATTACACAAGTGTAGAGATTTTCATTCAGTGCTTATGAAGTAGCTTAGCTGATACTGTGATCATATATATGTGTGTATGCTTGATAATACTTACTGTGAGTTTTCCATCAATTCGTGTTATTGATGTCCCAAAGGACTTCTGGTTGTTGCTTTCTTTTGCACAAACCAGCTCTCTTATTCACATCTTGCTACTGGAAACTTCTTTACCCAAACAGTAATAAAGTGAAATTTTTGCTATTTTGTTCATGTTAAGTTCGTTTGCTATTTTACTGGATTGCGGGTTGTTGGATGAATCTATTTTGATGTAGTGAAAGTTGCAAATACTACATCAAAATAGACTATATCTATTAAAGTCTATCACTCAGATTTTGCAATATTTGCAACTTTTCTTTACATTTCATTATTAGTCTTAAAAGTTTTGCTCATCACAATTACTCCTTAATGTAACGTTAAGTTTGCTAGGCAACTTGGTGGTTTTCTGTCATGTTGAAGTTCAGACTGCTGTTGAGTTCTGTAGAGTTCCTTGATTGCTTTGTTCTTGACCATCTTTCCGTTTGTTAGGTTTGATTTTTGTTGTGATCTACTAGCTTTTAGTTTAGACTAAAGCTTGGTTTGATGTGCTAGAATTCATTTAACTTTGCATTTGAGATTGAACTTTACTTCAAATCTGAAATCAGAATTTGGAATGAGAGAAATCAATGAAACATAGGTGCTATTGGTTTTTAGTATACAGAGGTAATGCATTGGAGATTGGTCTGGCTTCTGTACAATGATTAGAGATGAATTAACAAAATCTACATGTTCTTCAGTTCATAAACTTTCAATTTTATTTTCAAGTGGTTCTAGAACTTTAACAAATTTAGTACTCTCAATTCTGTGATCAATGGAGCTCCAAATTTCAAGTTATGTCTAATGTAAGTCATATATATATTTGGAATAAATTTTGTGACGAACTATGAAGACTTCATATCTATCATATCTTGAACGTGTGGGAAAGTTATTTGAGACAAAAAGATAGTTGGGAGATTTATGAAGTTATCTTAATCAAGATTGAGAATGTGCCAACATGTTGCCTCAAGAAAATTGGTAAGGAACTACGAATTTTCTTTAACCAACTAATTATCTTTACTAAAACATTTCATTATCGCAAAACTAATCAACTTTTTGACTTCCACCTTTATGATTAATAGAAAAAATTAAATACATGATTAAATTTATTATCAAGTCAC

mRNA sequence

TATGGCTTCATACTTCATAGGACGACCTAACTTACACGTTGTTATCCCTCGACTAAGAAATATAGAAAATCTAAAAAATAAACAAATCCCTTCAAGTTGAATCCTTCGTATCCTCTTCATCTTCATCTTTTTCTTCTTCTTCTTCTTCTTCCTCCCATTCTACTCTCTTCTACGCCTTTCTTTAATCTCTCTACCTTCTCAATTCCACGGATTCCTGTTTTTCATCCCCACCAACAACCATTCTCCTTTCTAACCCTTTCCCATTCTCTTTCTCTCACAGCTGCTGATATTTTGTGGGGTTCACTCAGAAATGGCGAATGAGTTTGGTGAATCAACGAGTATGCCACATCAAAACCCATCTTGCTCTACTAATAGTGATACTACTAATAATAATGATACTGGTGATTTTGAATGCAATATTTGCTTTGAGTTAGCTCAAGACCCGATTATTACTCTTTGTGGTCATCTCTTTTGCTGGCCTTGTTTATATAGATGGCTGCATCATCACTCACAATGTCAAGAATGTCCTGTTTGTAAGGCTCTTATTCAAGAGGAAAAGTTGGTTCCTCTTTATGGTAGGGGTAAAATACCATCTGATCCAAGATTAAATACATATCCTGGTCTTGATATTCCAAATCGTCCTGCTGGTCAAAGGCCTCAAACGGCACCACCTCCGGTTCCTAACAATTTTCCGAACTATGGATTTGGATTCGCTGGTGGCTTTATGCCAATGGCATCGGCAAGAATTGGCAATTTCACTTTAGCTACTGCTTTTGGTGGTCTGATCCCATCTTTATTCAATATCCAGTTTCATGGATTTCCTGATGCTACTGTTTATGGAACTACTTCTGGTTACCCTTATGCATTCAACACCTTTCATGGAGGTCATGGTCACCATTTTCCGCAACCGTCCACTCGAGGTCAGCATGCTGATAACGTACTGAAAAACCTTCTTTTACTTGTTGGTGTATTTGTAATTCTTGCCTTGCTCTGGTGGTAGAAGATAATGTTTGACTTCAATGGAAATTACACAAGTGTAGAGATTTTCATTCAGTGCTTATGAAGTAGCTTAGCTGATACTGTGATCATATATATGTGTGTATGCTTGATAATACTTACTGTGAGTTTTCCATCAATTCGTGTTATTGATGTCCCAAAGGACTTCTGGTTGTTGCTTTCTTTTGCACAAACCAGCTCTCTTATTCACATCTTGCTACTGGAAACTTCTTTACCCAAACAGTAATAAAGTGAAATTTTTGCTATTTTGTTCATGTTAAGTTCGTTTGCTATTTTACTGGATTGCGGGTTGTTGGATGAATCTATTTTGATGTAGTGAAAGTTGCAAATACTACATCAAAATAGACTATATCTATTAAAGTCTATCACTCAGATTTTGCAATATTTGCAACTTTTCTTTACATTTCATTATTAGTCTTAAAAGTTTTGCTCATCACAATTACTCCTTAATGTAACGTTAAGTTTGCTAGGCAACTTGGTGGTTTTCTGTCATGTTGAAGTTCAGACTGCTGTTGAGTTCTGTAGAGTTCCTTGATTGCTTTGTTCTTGACCATCTTTCCGTTTGTTAGGTTTGATTTTTGTTGTGATCTACTAGCTTTTAGTTTAGACTAAAGCTTGGTTTGATGTGCTAGAATTCATTTAACTTTGCATTTGAGATTGAACTTTACTTCAAATCTGAAATCAGAATTTGGAATGAGAGAAATCAATGAAACATAGGTGCTATTGGTTTTTAGTATACAGAGGTAATGCATTGGAGATTGGTCTGGCTTCTGTACAATGATTAGAGATGAATTAACAAAATCTACATGTTCTTCAGTTCATAAACTTTCAATTTTATTTTCAAGTGGTTCTAGAACTTTAACAAATTTAGTACTCTCAATTCTGTGATCAATGGAGCTCCAAATTTCAAGTTATGTCTAATGTAAGTCATATATATATTTGGAATAAATTTTGTGACGAACTATGAAGACTTCATATCTATCATATCTTGAACGTGTGGGAAAGTTATTTGAGACAAAAAGATAGTTGGGAGATTTATGAAGTTATCTTAATCAAGATTGAGAATGTGCCAACATGTTGCCTCAAGAAAATTGGTAAGGAACTACGAATTTTCTTTAACCAACTAATTATCTTTACTAAAACATTTCATTATCGCAAAACTAATCAACTTTTTGACTTCCACCTTTATGATTAATAGAAAAAATTAAATACATGATTAAATTTATTATCAAGTCAC

Coding sequence (CDS)

ATGGCGAATGAGTTTGGTGAATCAACGAGTATGCCACATCAAAACCCATCTTGCTCTACTAATAGTGATACTACTAATAATAATGATACTGGTGATTTTGAATGCAATATTTGCTTTGAGTTAGCTCAAGACCCGATTATTACTCTTTGTGGTCATCTCTTTTGCTGGCCTTGTTTATATAGATGGCTGCATCATCACTCACAATGTCAAGAATGTCCTGTTTGTAAGGCTCTTATTCAAGAGGAAAAGTTGGTTCCTCTTTATGGTAGGGGTAAAATACCATCTGATCCAAGATTAAATACATATCCTGGTCTTGATATTCCAAATCGTCCTGCTGGTCAAAGGCCTCAAACGGCACCACCTCCGGTTCCTAACAATTTTCCGAACTATGGATTTGGATTCGCTGGTGGCTTTATGCCAATGGCATCGGCAAGAATTGGCAATTTCACTTTAGCTACTGCTTTTGGTGGTCTGATCCCATCTTTATTCAATATCCAGTTTCATGGATTTCCTGATGCTACTGTTTATGGAACTACTTCTGGTTACCCTTATGCATTCAACACCTTTCATGGAGGTCATGGTCACCATTTTCCGCAACCGTCCACTCGAGGTCAGCATGCTGATAACGTACTGAAAAACCTTCTTTTACTTGTTGGTGTATTTGTAATTCTTGCCTTGCTCTGGTGGTAG

Protein sequence

MANEFGESTSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYRWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAPPPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSGYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW*

Homology

[Close]

BLAST of CsGy6G026740 vs. ExPASy Swiss-Prot
Match: Q09463 (E3 ubiquitin ligase rnf-5 OS=Caenorhabditis elegans OX=6239 GN=rnf-5 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.8e-27
Identity = 81/246 (32.93%), Postives = 116/246 (47.15%), Query Frame = 0


Query: 9   TSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYRWLHHHSQ 68
           T  P + P+ S+N D     ++  FECNIC + A+D +++LCGHLFCWPCL +WL     
Sbjct: 5   TKAPSEEPTSSSNKD-----ESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPN 64

Query: 69  CQECPVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAPPPVPNNFP 128
            Q CPVCK+ I   K+VP+YGRG   SDPR        +P RP GQR +    P P +F 
Sbjct: 65  NQVCPVCKSAIDGNKVVPIYGRGGDSSDPRKK------VPPRPKGQRSE----PPPQSFA 124

Query: 129 NYGFGFAGGFMPMASARIG-NFTLATAFGGLIPSLFNIQF---------------HGFPD 188
            + +G  GG M      +  +F + T   GL P +F + F               +G   
Sbjct: 125 GFNWGGDGGMMGGGGPNVHFSFGIGTV-NGLFPLMFMLPFIQGIFPLSFVASFFGNGNQG 184

Query: 189 ATVYGTTSG---------YPYAFNTFHGGHGH-HFPQPSTRGQHADNVLKNLLLLVGVFV 229
           A   G  +G         + +     HG  GH     P +R    +  L N+   +G F+
Sbjct: 185 AAAAGGGNGGGNDGNDGTHAHTHGHTHGPRGHGESAAPGSRMAQEEEYLSNIFKYIGFFM 234

[Close]

BLAST of CsGy6G026740 vs. ExPASy Swiss-Prot
Match: Q5ZIR9 (E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus OX=9031 GN=RNF185 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.0e-26
Identity = 76/173 (43.93%), Postives = 93/173 (53.76%), Query Frame = 0


Query: 7   ESTSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYRWLHHH 66
           +S+S    + S S+N    N N    FECNIC + A+D +I+LCGHLFCWPCL++WL   
Sbjct: 13  KSSSTGGTSGSSSSNGAGDNTNQDNTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETR 72

Query: 67  SQCQECPVCKALIQEEKLVPLYGRGKI-PSDPRLNTYPGLDIPNRPAGQRPQTAPPPVPN 126
              Q CPVCKA I  +K++PLYGRG     DPR  T      P RP GQRP+   P    
Sbjct: 73  PNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE---PENRG 132

Query: 127 NFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGT 179
            F  +GFG  GGF    S  IG F       G+  + FNI   G P   V GT
Sbjct: 133 GFQGFGFG-DGGF--QMSFGIGAFPF-----GIFATAFNIN-DGRPPPAVPGT 167

[Close]

BLAST of CsGy6G026740 vs. ExPASy Swiss-Prot
Match: Q5RFK9 (E3 ubiquitin-protein ligase RNF185 OS=Pongo abelii OX=9601 GN=RNF185 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.7e-25
Identity = 77/183 (42.08%), Postives = 97/183 (53.01%), Query Frame = 0


Query: 1   MANEFGESTSMPHQN----PSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCW 60
           MA++   ++S P  +    PS S+N    +      FECNIC + A+D +I+LCGHLFCW
Sbjct: 1   MASKGPSASSSPENSSAGGPSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCW 60

Query: 61  PCLYRWLHHHSQCQECPVCKALIQEEKLVPLYGRGKI-PSDPRLNTYPGLDIPNRPAGQR 120
           PCL++WL      Q CPVCKA I  +K++PLYGRG     DPR  T      P RP GQR
Sbjct: 61  PCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQR 120

Query: 121 PQTAPPPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATV 179
           P+   P     F  +GFG  GGF    S  IG F       G+  + FNI   G P   V
Sbjct: 121 PE---PENRGGFQGFGFG-DGGF--QMSFGIGAFPF-----GIFATAFNIN-DGRPPPAV 165

[Close]

BLAST of CsGy6G026740 vs. ExPASy Swiss-Prot
Match: Q91YT2 (E3 ubiquitin-protein ligase RNF185 OS=Mus musculus OX=10090 GN=Rnf185 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.5e-25
Identity = 77/179 (43.02%), Postives = 93/179 (51.96%), Query Frame = 0


Query: 6   GESTSMPHQN-----PSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY 65
           G S S   +N     PS S+N    +      FECNIC + A+D +I+LCGHLFCWPCL+
Sbjct: 5   GPSASASTENSNAGGPSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLH 64

Query: 66  RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKI-PSDPRLNTYPGLDIPNRPAGQRPQTA 125
           +WL      Q CPVCKA I  +K++PLYGRG     DPR  T      P RP GQRP+  
Sbjct: 65  QWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE-- 124

Query: 126 PPPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGT 179
            P     F  +GFG  GGF    S  IG F       G+  + FNI   G P   V GT
Sbjct: 125 -PENRGGFQGFGFG-DGGF--QMSFGIGAFPF-----GIFATAFNIN-DGRPPPAVPGT 165

[Close]

BLAST of CsGy6G026740 vs. ExPASy Swiss-Prot
Match: Q568Y3 (E3 ubiquitin-protein ligase RNF185 OS=Rattus norvegicus OX=10116 GN=Rnf185 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.5e-25
Identity = 77/179 (43.02%), Postives = 93/179 (51.96%), Query Frame = 0


Query: 6   GESTSMPHQN-----PSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY 65
           G S S   +N     PS S+N    +      FECNIC + A+D +I+LCGHLFCWPCL+
Sbjct: 5   GPSASASTENSSAGGPSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLH 64

Query: 66  RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKI-PSDPRLNTYPGLDIPNRPAGQRPQTA 125
           +WL      Q CPVCKA I  +K++PLYGRG     DPR  T      P RP GQRP+  
Sbjct: 65  QWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE-- 124

Query: 126 PPPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGT 179
            P     F  +GFG  GGF    S  IG F       G+  + FNI   G P   V GT
Sbjct: 125 -PENRGGFQGFGFG-DGGF--QMSFGIGAFPF-----GIFATAFNIN-DGRPPPAVPGT 165

[Close]

BLAST of CsGy6G026740 vs. NCBI nr
Match: XP_004141954.1 (E3 ubiquitin-protein ligase RNF185 [Cucumis sativus] >KGN48448.1 hypothetical protein Csa_003683 [Cucumis sativus])

HSP 1 Score: 489 bits (1259), Expect = 7.45e-175
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MANEFGESTSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY 60
           MANEFGESTSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY
Sbjct: 1   MANEFGESTSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY 60

Query: 61  RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAP 120
           RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAP
Sbjct: 61  RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAP 120

Query: 121 PPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180
           PPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS
Sbjct: 121 PPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180

Query: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229
           GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW
Sbjct: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229

[Close]

BLAST of CsGy6G026740 vs. NCBI nr
Match: XP_008440158.1 (PREDICTED: E3 ubiquitin-protein ligase RNF185 [Cucumis melo] >XP_008440160.1 PREDICTED: E3 ubiquitin-protein ligase RNF185 [Cucumis melo])

HSP 1 Score: 471 bits (1213), Expect = 7.44e-168
Identity = 222/229 (96.94%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 1   MANEFGESTSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY 60
           MANEFGESTSMPH+NPSCSTNSDTTNN DTGDFECNICFELAQDPIITLCGHLFCWPCLY
Sbjct: 1   MANEFGESTSMPHRNPSCSTNSDTTNN-DTGDFECNICFELAQDPIITLCGHLFCWPCLY 60

Query: 61  RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAP 120
           RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLN YPG+DIPNRPAGQRPQTAP
Sbjct: 61  RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAP 120

Query: 121 PPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180
           PPVPN+F NYGFGF GGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS
Sbjct: 121 PPVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180

Query: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229
           GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW
Sbjct: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 228

[Close]

BLAST of CsGy6G026740 vs. NCBI nr
Match: TYK12950.1 (E3 ubiquitin-protein ligase RNF185 [Cucumis melo var. makuwa])

HSP 1 Score: 471 bits (1212), Expect = 1.06e-167
Identity = 221/229 (96.51%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 1   MANEFGESTSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY 60
           MANEFGESTSMPH+NPSCSTNSDTTNN DTGDFECNICFELAQDPIITLCGHLFCWPCLY
Sbjct: 1   MANEFGESTSMPHRNPSCSTNSDTTNN-DTGDFECNICFELAQDPIITLCGHLFCWPCLY 60

Query: 61  RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAP 120
           RWLHHHSQCQECPVCKAL+QEEKLVPLYGRGKIPSDPRLN YPG+DIPNRPAGQRPQTAP
Sbjct: 61  RWLHHHSQCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAP 120

Query: 121 PPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180
           PPVPN+F NYGFGF GGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS
Sbjct: 121 PPVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180

Query: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229
           GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW
Sbjct: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 228

[Close]

BLAST of CsGy6G026740 vs. NCBI nr
Match: XP_038881107.1 (E3 ubiquitin-protein ligase RNF185-like [Benincasa hispida])

HSP 1 Score: 464 bits (1193), Expect = 8.35e-165
Identity = 218/229 (95.20%), Postives = 224/229 (97.82%), Query Frame = 0


Query: 1   MANEFGESTSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY 60
           MANEFGESTS+PHQN S STNSDTTNN DTGDFECNICFELAQDPIITLCGHLFCWPCLY
Sbjct: 1   MANEFGESTSVPHQNSSWSTNSDTTNN-DTGDFECNICFELAQDPIITLCGHLFCWPCLY 60

Query: 61  RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAP 120
           RWLHHHSQCQECPVCKAL+QEEKLVPLYGRGKIPSDPRLN YPG+DIP+RPAGQRPQTAP
Sbjct: 61  RWLHHHSQCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPSRPAGQRPQTAP 120

Query: 121 PPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180
           PPVPN+FPNYGFGF GGFMPMA+ARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS
Sbjct: 121 PPVPNDFPNYGFGFTGGFMPMATARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180

Query: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229
           GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW
Sbjct: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 228

[Close]

BLAST of CsGy6G026740 vs. NCBI nr
Match: XP_022949606.1 (E3 ubiquitin-protein ligase RNF185-like [Cucurbita moschata] >XP_022978947.1 E3 ubiquitin-protein ligase RNF185-like [Cucurbita maxima] >XP_023543222.1 E3 ubiquitin-protein ligase RNF185-like [Cucurbita pepo subsp. pepo] >KAG7034387.1 RING finger protein 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 451 bits (1159), Expect = 1.28e-159
Identity = 211/229 (92.14%), Postives = 218/229 (95.20%), Query Frame = 0


Query: 1   MANEFGESTSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY 60
           MANEFGESTS+PHQNPS S+NSD TNN DTGDFECNICFELAQDPIITLCGHLFCWPCLY
Sbjct: 1   MANEFGESTSVPHQNPSWSSNSDNTNN-DTGDFECNICFELAQDPIITLCGHLFCWPCLY 60

Query: 61  RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAP 120
           RWLHHHSQCQECPVCKAL+QEEKLVPLYGRGK PSDPRLN YPG+DIPNRPAGQRPQTAP
Sbjct: 61  RWLHHHSQCQECPVCKALVQEEKLVPLYGRGKAPSDPRLNRYPGIDIPNRPAGQRPQTAP 120

Query: 121 PPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180
           PP  N+F NYGFGF GGFMPMA+ARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS
Sbjct: 121 PPAANDFANYGFGFTGGFMPMAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180

Query: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229
           GYPYAFNTFHGGHGHHFPQP +RGQHADNVLKNL LLVGVFVILALLWW
Sbjct: 181 GYPYAFNTFHGGHGHHFPQPPSRGQHADNVLKNLFLLVGVFVILALLWW 228

[Close]

BLAST of CsGy6G026740 vs. ExPASy TrEMBL
Match: A0A0A0KG01 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G487690 PE=4 SV=1)

HSP 1 Score: 489 bits (1259), Expect = 3.61e-175
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MANEFGESTSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY 60
           MANEFGESTSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY
Sbjct: 1   MANEFGESTSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY 60

Query: 61  RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAP 120
           RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAP
Sbjct: 61  RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAP 120

Query: 121 PPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180
           PPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS
Sbjct: 121 PPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180

Query: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229
           GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW
Sbjct: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229

[Close]

BLAST of CsGy6G026740 vs. ExPASy TrEMBL
Match: A0A1S3B021 (E3 ubiquitin-protein ligase RNF185 OS=Cucumis melo OX=3656 GN=LOC103484707 PE=4 SV=1)

HSP 1 Score: 471 bits (1213), Expect = 3.60e-168
Identity = 222/229 (96.94%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 1   MANEFGESTSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY 60
           MANEFGESTSMPH+NPSCSTNSDTTNN DTGDFECNICFELAQDPIITLCGHLFCWPCLY
Sbjct: 1   MANEFGESTSMPHRNPSCSTNSDTTNN-DTGDFECNICFELAQDPIITLCGHLFCWPCLY 60

Query: 61  RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAP 120
           RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLN YPG+DIPNRPAGQRPQTAP
Sbjct: 61  RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAP 120

Query: 121 PPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180
           PPVPN+F NYGFGF GGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS
Sbjct: 121 PPVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180

Query: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229
           GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW
Sbjct: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 228

[Close]

BLAST of CsGy6G026740 vs. ExPASy TrEMBL
Match: A0A5D3CNC7 (E3 ubiquitin-protein ligase RNF185 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005460 PE=4 SV=1)

HSP 1 Score: 471 bits (1212), Expect = 5.12e-168
Identity = 221/229 (96.51%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 1   MANEFGESTSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY 60
           MANEFGESTSMPH+NPSCSTNSDTTNN DTGDFECNICFELAQDPIITLCGHLFCWPCLY
Sbjct: 1   MANEFGESTSMPHRNPSCSTNSDTTNN-DTGDFECNICFELAQDPIITLCGHLFCWPCLY 60

Query: 61  RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAP 120
           RWLHHHSQCQECPVCKAL+QEEKLVPLYGRGKIPSDPRLN YPG+DIPNRPAGQRPQTAP
Sbjct: 61  RWLHHHSQCQECPVCKALVQEEKLVPLYGRGKIPSDPRLNRYPGIDIPNRPAGQRPQTAP 120

Query: 121 PPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180
           PPVPN+F NYGFGF GGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS
Sbjct: 121 PPVPNDFANYGFGFTGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180

Query: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229
           GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW
Sbjct: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 228

[Close]

BLAST of CsGy6G026740 vs. ExPASy TrEMBL
Match: A0A6J1IMG5 (E3 ubiquitin-protein ligase RNF185-like OS=Cucurbita maxima OX=3661 GN=LOC111478748 PE=4 SV=1)

HSP 1 Score: 451 bits (1159), Expect = 6.18e-160
Identity = 211/229 (92.14%), Postives = 218/229 (95.20%), Query Frame = 0


Query: 1   MANEFGESTSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY 60
           MANEFGESTS+PHQNPS S+NSD TNN DTGDFECNICFELAQDPIITLCGHLFCWPCLY
Sbjct: 1   MANEFGESTSVPHQNPSWSSNSDNTNN-DTGDFECNICFELAQDPIITLCGHLFCWPCLY 60

Query: 61  RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAP 120
           RWLHHHSQCQECPVCKAL+QEEKLVPLYGRGK PSDPRLN YPG+DIPNRPAGQRPQTAP
Sbjct: 61  RWLHHHSQCQECPVCKALVQEEKLVPLYGRGKAPSDPRLNRYPGIDIPNRPAGQRPQTAP 120

Query: 121 PPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180
           PP  N+F NYGFGF GGFMPMA+ARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS
Sbjct: 121 PPAANDFANYGFGFTGGFMPMAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180

Query: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229
           GYPYAFNTFHGGHGHHFPQP +RGQHADNVLKNL LLVGVFVILALLWW
Sbjct: 181 GYPYAFNTFHGGHGHHFPQPPSRGQHADNVLKNLFLLVGVFVILALLWW 228

[Close]

BLAST of CsGy6G026740 vs. ExPASy TrEMBL
Match: A0A6J1GCG3 (E3 ubiquitin-protein ligase RNF185-like OS=Cucurbita moschata OX=3662 GN=LOC111452948 PE=4 SV=1)

HSP 1 Score: 451 bits (1159), Expect = 6.18e-160
Identity = 211/229 (92.14%), Postives = 218/229 (95.20%), Query Frame = 0


Query: 1   MANEFGESTSMPHQNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLY 60
           MANEFGESTS+PHQNPS S+NSD TNN DTGDFECNICFELAQDPIITLCGHLFCWPCLY
Sbjct: 1   MANEFGESTSVPHQNPSWSSNSDNTNN-DTGDFECNICFELAQDPIITLCGHLFCWPCLY 60

Query: 61  RWLHHHSQCQECPVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAP 120
           RWLHHHSQCQECPVCKAL+QEEKLVPLYGRGK PSDPRLN YPG+DIPNRPAGQRPQTAP
Sbjct: 61  RWLHHHSQCQECPVCKALVQEEKLVPLYGRGKAPSDPRLNRYPGIDIPNRPAGQRPQTAP 120

Query: 121 PPVPNNFPNYGFGFAGGFMPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180
           PP  N+F NYGFGF GGFMPMA+ARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS
Sbjct: 121 PPAANDFANYGFGFTGGFMPMAAARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTS 180

Query: 181 GYPYAFNTFHGGHGHHFPQPSTRGQHADNVLKNLLLLVGVFVILALLWW 229
           GYPYAFNTFHGGHGHHFPQP +RGQHADNVLKNL LLVGVFVILALLWW
Sbjct: 181 GYPYAFNTFHGGHGHHFPQPPSRGQHADNVLKNLFLLVGVFVILALLWW 228

[Close]

BLAST of CsGy6G026740 vs. TAIR 10
Match: AT2G23780.1 (RING/U-box superfamily protein )

HSP 1 Score: 272.7 bits (696), Expect = 2.7e-73
Identity = 139/224 (62.05%), Postives = 164/224 (73.21%), Query Frame = 0


Query: 17  SCSTNSDTTNNNDT----GDFECNICFELAQDPIITLCGHLFCWPCLYRWLHHHSQCQEC 76
           S ++ S + +NNDT    GDFECNICFELAQDPI+TLCGHLFCWPCLYRWLHHHS  QEC
Sbjct: 6   SSTSTSYSDSNNDTNDQGGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQEC 65

Query: 77  PVCKALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQT-APPPVP---NNFP 136
           PVCKA++Q++KLVPLYGRGK  +DPR   YPGL IPNRP GQRP+T APPP P   +NF 
Sbjct: 66  PVCKAVVQDDKLVPLYGRGKNQTDPRSKRYPGLRIPNRPTGQRPETAAPPPQPEAASNFF 125

Query: 137 NYGFGFAGGFMP-MASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYGTTSGYPYA-- 196
           NYG G  GG MP MA+ R GNF++   FGGL+PSLFN QFHGF DAT+YG+T GYPY   
Sbjct: 126 NYGIGLMGGIMPMMATTRFGNFSM--GFGGLLPSLFNFQFHGFHDATLYGSTPGYPYGGY 185

Query: 197 FNTFHGGHGHHFPQPSTR-GQHADNVLKNLLLLVGVFVILALLW 229
            N F G       +P  R G  +D  LKN+L  VG+ V++ L+W
Sbjct: 186 HNGFRGVPPRGQERPMARGGNQSDAFLKNILFFVGICVVIFLIW 227

[Close]

BLAST of CsGy6G026740 vs. TAIR 10
Match: AT1G19310.1 (RING/U-box superfamily protein )

HSP 1 Score: 271.2 bits (692), Expect = 7.8e-73
Identity = 135/220 (61.36%), Postives = 171/220 (77.73%), Query Frame = 0


Query: 16  PSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYRWLHHHSQCQECPVC 75
           PSCS+ +D TNNND+ +FECNIC +LAQDPI+TLCGHLFCWPCLY+WLH HSQ ++CPVC
Sbjct: 5   PSCSSGND-TNNNDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQSKDCPVC 64

Query: 76  KALIQEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAPPPVPNN--FPNYGF- 135
           KA+I+E++LVPLYGRGK  +DPR  + PGL++PNRP+GQRP+TA PP PN+    ++GF 
Sbjct: 65  KAVIEEDRLVPLYGRGKSSADPRSKSIPGLEVPNRPSGQRPETAQPPDPNHGFAHHHGFG 124

Query: 136 GFAGGF-MPMASARIGNFTLATAFGGLIPSLFNIQFHGFPDATVYG--TTSGYPYAF-NT 195
           GF GGF  PMASAR GN TL+ AFGGLIPSLFN+ FHGFPDA +YG   + G+P+ F N 
Sbjct: 125 GFMGGFAAPMASARFGNVTLSAAFGGLIPSLFNLHFHGFPDAAMYGAAASGGFPHGFSNP 184

Query: 196 FHGGHG--HHFPQPSTRGQHADNVLKNLLLLVGVFVILAL 227
           FHGGH   H + + + R    D+ L+ LLL+V V V+ +L
Sbjct: 185 FHGGHSHMHSYQRHTGRQGQQDHHLRILLLIVFVVVVFSL 223

[Close]

BLAST of CsGy6G026740 vs. TAIR 10
Match: AT1G74990.1 (RING/U-box superfamily protein )

HSP 1 Score: 143.3 bits (360), Expect = 2.5e-34
Identity = 70/136 (51.47%), Postives = 90/136 (66.18%), Query Frame = 0


Query: 21  NSDTTNNND-TGDFECNICFELAQDPIITLCGHLFCWPCLYRWLHHHSQCQECPVCKALI 80
           N+ T   +D + +F CNIC ELA++PI+TLCGHLFCWPCLY+WLH+HS+   CPVCKAL+
Sbjct: 4   NTITNEEDDASNNFGCNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKSNHCPVCKALV 63

Query: 81  QEEKLVPLYGRGKIPSDPRLNTYPGLDIPNRPAGQRPQTAPPPVPNNFPNYGFGFAGGFM 140
           +E+ LVPLYG GK  SDPR     G+ +PNRPA  R +TA P +     ++G  F GG  
Sbjct: 64  KEDTLVPLYGMGKPSSDPRSKLNSGVTVPNRPAATRTETARPRLEQR--HHGSSFFGGHS 123

Query: 141 PMAS----ARIGNFTL 152
             A+     R  NF L
Sbjct: 124 SFAAMPTGLRFSNFLL 137

[Close]

BLAST of CsGy6G026740 vs. TAIR 10
Match: AT4G28270.1 (RING membrane-anchor 2 )

HSP 1 Score: 98.2 bits (243), Expect = 9.1e-21
Identity = 45/105 (42.86%), Postives = 63/105 (60.00%), Query Frame = 0


Query: 23  DTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYRWLH-------------HHSQC 82
           DTT  +  GDF+CNIC +  +DP++TLCGHLFCWPC+++W +             H  + 
Sbjct: 9   DTTLVDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREP 68

Query: 83  QECPVCKALIQEEKLVPLYGRG-KIPSDPRLNTYPGLDIPNRPAG 114
            +CPVCK+ + E  LVP+YGRG K P         G ++P+RP G
Sbjct: 69  PKCPVCKSDVSEATLVPIYGRGQKAPQS-------GSNVPSRPTG 106

[Close]

BLAST of CsGy6G026740 vs. TAIR 10
Match: AT4G27470.1 (RING membrane-anchor 3 )

HSP 1 Score: 97.8 bits (242), Expect = 1.2e-20
Identity = 50/110 (45.45%), Postives = 62/110 (56.36%), Query Frame = 0


Query: 14  QNPSCSTNSDTTNNNDTGDFECNICFELAQDPIITLCGHLFCWPCLYRWLHHH------- 73
           Q P+ +T       N++G F+CNIC + A DP++TLCGHLFCWPC+Y+WLH         
Sbjct: 23  QKPNLTTAPTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVD 82

Query: 74  SQCQECPVCKALIQEEKLVPLYGRG-KIPSD---PRLNTYPGLDIPNRPA 113
                CPVCK+ I    LVPLYGRG   PS     +       DIP RPA
Sbjct: 83  QHQNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPA 132

The following BLAST results are available for this feature:

BLAST of CsGy6G026740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q09463	4.8e-27	32.93	E3 ubiquitin ligase rnf-5 OS=Caenorhabditis elegans OX=6239 GN=rnf-5 PE=1 SV=1	[more]
Q5ZIR9	7.0e-26	43.93	E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus OX=9031 GN=RNF185 PE=2 SV=1	[more]
Q5RFK9	2.7e-25	42.08	E3 ubiquitin-protein ligase RNF185 OS=Pongo abelii OX=9601 GN=RNF185 PE=2 SV=1	[more]
Q91YT2	4.5e-25	43.02	E3 ubiquitin-protein ligase RNF185 OS=Mus musculus OX=10090 GN=Rnf185 PE=2 SV=1	[more]
Q568Y3	4.5e-25	43.02	E3 ubiquitin-protein ligase RNF185 OS=Rattus norvegicus OX=10116 GN=Rnf185 PE=2 ...	[more]

BLAST of CsGy6G026740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141954.1	7.45e-175	100.00	E3 ubiquitin-protein ligase RNF185 [Cucumis sativus] >KGN48448.1 hypothetical pr...	[more]
XP_008440158.1	7.44e-168	96.94	PREDICTED: E3 ubiquitin-protein ligase RNF185 [Cucumis melo] >XP_008440160.1 PRE...	[more]
TYK12950.1	1.06e-167	96.51	E3 ubiquitin-protein ligase RNF185 [Cucumis melo var. makuwa]	[more]
XP_038881107.1	8.35e-165	95.20	E3 ubiquitin-protein ligase RNF185-like [Benincasa hispida]	[more]
XP_022949606.1	1.28e-159	92.14	E3 ubiquitin-protein ligase RNF185-like [Cucurbita moschata] >XP_022978947.1 E3 ...	[more]

BLAST of CsGy6G026740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG01	3.61e-175	100.00	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G487690 P...	[more]
A0A1S3B021	3.60e-168	96.94	E3 ubiquitin-protein ligase RNF185 OS=Cucumis melo OX=3656 GN=LOC103484707 PE=4 ...	[more]
A0A5D3CNC7	5.12e-168	96.51	E3 ubiquitin-protein ligase RNF185 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1IMG5	6.18e-160	92.14	E3 ubiquitin-protein ligase RNF185-like OS=Cucurbita maxima OX=3661 GN=LOC111478...	[more]
A0A6J1GCG3	6.18e-160	92.14	E3 ubiquitin-protein ligase RNF185-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of CsGy6G026740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23780.1	2.7e-73	62.05	RING/U-box superfamily protein	[more]
AT1G19310.1	7.8e-73	61.36	RING/U-box superfamily protein	[more]
AT1G74990.1	2.5e-34	51.47	RING/U-box superfamily protein	[more]
AT4G28270.1	9.1e-21	42.86	RING membrane-anchor 2	[more]
AT4G27470.1	1.2e-20	45.45	RING membrane-anchor 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 35..75 e-value: 9.6E-7 score: 38.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 35..76 score: 13.212175
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 3..90 e-value: 6.7E-17 score: 63.2
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 33..80 e-value: 5.2E-8 score: 32.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR12313:SF47	RING ZINC FINGER PROTEIN-RELATED	coord: 2..228
None	No IPR available	CDD	cd16745	RING-HC_AtRMA_like	coord: 33..77 e-value: 1.16429E-29 score: 103.153
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 31..88
IPR045103	E3 ubiquitin-protein ligase RNF5/RNF185-like	PANTHER	PTHR12313	E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED	coord: 2..228
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 50..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G026740.1	CsGy6G026740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071712	ER-associated misfolded protein catabolic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0044390	ubiquitin-like protein conjugating enzyme binding
molecular_function	GO:0061630	ubiquitin protein ligase activity