CsGy6G026460 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G026460
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	protein SLOW GREEN 1, chloroplastic
Location	Gy14Chr6: 26024338 .. 26028103 (-)
RNA-Seq Expression	CsGy6G026460
Synteny	CsGy6G026460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAAAAGTCCCGGTAGCCGTTCGGCTATTCGTCAGAAATGGGTTCAACTTCAGCTTCAACTTTCTCAGTTTCATCTCAAATTGAACTTCCCAGACCACCCAAATTCTCAAGCTACAATGTCCGGGCATTGTCTAAGTGTCAATATAACATTCTTCAGAAGAATTACAAACTATCCTCCCAAAGCTTGTTCTGCTCACATGCGAAAATTTTTCATTCCCCCATTCACAATACCCCCTTCTCAAACCTCTCTGAGTCCGATATACGTCGTTTTAACTCACCCCAGATAAAAATTTCGAAGTATTTCATTGAAAAATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATGTAAGATATGTCAGGGCATTGCCTGCTCAGACAAGTAACAAAAACCCGATATTGGCTGAAAAAGCTCAAGTTCCAGAGGAGGATAGTGAAGAGGTGATGTGGGAGAGGATCTTGGAGCATGATCCAAGTAATGTTGATACTCTGAAAGCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGAACGCCGTTAAGTATGTTAAGAGGTTGATTGATCTTGAGCCTGATGAGGTTGAATGGAGAATTTTGTTGGCTCTTTGTTATGAGATATTGGGGGAGCTGGGCACGGCTAAAAGATTGTTCATGGAAATTCTGAAGCAGAAACCTCTTTTGGTTAGAGCTCTGCATGTAAGGTTTTTGCTCGACCGTGTGATATGAAAATAGATTTATGTTTCTTTAGACTGATAGTTTAGGTTTTCATGTTACTTGGTGCAAGTGTTAAATGAAGTTATTATTTATGTACTAAGCCAGTTTGATGTTTACATTAGAGATTGTTTTGGGAAAAAATGAATCCTGAACTGACTGAGGGTGGTTAATAACAAGGTGAATTATTGTCTTTGAAAGTAATGTTAAGACACCAGCTTTTGAGCAAGAACTGCTAGGAAATGACTTCTATGAGAATAGTTGATGTGGTTTTTTCGCTCTATATATTCTCTATGATTTCTAGTTCTCCTTATAATTTGAGCATTAGTTTCTTTCCATTATATCAATGAAAAGTTTTGTCTTCGGTTAAAAAAAAAGTTATATGATTTCTACCCTAATGTTTTATTTGAACTTGAATTTTTACATCATGCTGGCCAAATTTTCTGAACGTATTGTAGTTGTGAAGGCAATTTTTGCTCTTCAGTCCCATTCATGTTATTCAAGCATGACATAAGATACTGCCTTAGAAATCTTTTAACTTCTCAAGGGAAGATACTAACCAATATGTTAGCATGTAATAAAAACTTTAATATTGTCATCTCATCTGTGGGCTGCCTTGCTAGTTTTGAAGTTGCAACCTTTTATAGCTTTTCTCTATGTCTTTAACAAGGTATGTCAATGCTTAATTTGAAACTTTCAATTTGCACTTTCTTCAGGGTTTGGCGTTAGTGATGCATAAGAACAATGAAGGTGAATCTGTCTTTGAGATGCTCAATAAGGCACTAGATATTGCTCGTGATGAGAAAAAACTTACCGAACATAGAAGCATCGGGATACTAATTGCTCAAATGCATGTTGTGAAGGTCATTTGCTACTTATTTCTAGGGCATGTTTCGATTGACTTTCTAAGTGCTTAGTAAATATTTTTTCTTGAACTTAACACTTACTCACTATGTTTCACCCTCGGGGATTTCCTGCTTCTTACACTGTATCTAACTGCGTAGAAGGGTGCAAATGTTTGGACGCCTAGCATTGAAAAATTATCTGTCTAACTGCCTGTTATATGCATTTGAATTACTCCAAAAAGTTGTTAAGAACTAAAGTTATGAAAGACTGGATTGTATATTGACTAGTACAAGATTAAAAAAAAATGTCATTATGTATTCCTATTTTTAGGGTCTAGATGGTATGATCTTCACGGTGTCTTAAGGTTGCTTTCATTTTTGATAATCATACTGTTTCGTGGAAAAAGCAACTTTTATGGAAATGTGGAAAAAGCATAACTTTTATGAAATGAAACATGATAATCATAAAGCTAAGATTTTTCCGGTCAACACAAATTTCTTGGAATGCTAGAGAGAAATCACATAACTTTTATGGAAATGTGGAGATGGCAATGGCACTTTAGATCTGGCTTGTTATGCAGCCTCTAGATAAAGTTCCTTCTCTTGCCCTTTTAAATTACTTTTTTTTTTATTAATTGATTGCCAACTGTTGAGCTTTTCTGTTATTATTTTGAATCTTTAAGCATTTTAGAATTTCTAATTTTTCACCTTAATGCTCTGGATTCTTGTCCAACAAAGTAGTTTGTCTTTCAGGGGGAACTGGAAGAGGGCTTGAAGAAGTTCCAAAATCTTGTTGAGGAAAACCCAAGGGATTTTCGACCCCATCTCTGCCAGGTTCTGACATAATTTTCAGTCTACCTATCTTTTTTATCATAATTTTGGATTAGTCCATTTCCACACTGCATGTCAAATACCTCAGCGAGTCAGCGTACTAGGGCACTTATGTGTCACATTAATATGGAGGAAGTCATATTTTTTCTTTGTCAAGAACTGGTATGAATGTTTTATGATTATTGGCATTCAATTCAACCACACGATCTGCACCGAAGATATGGTTGTCTGTACTTGGGACATTTATTATTGATGTTAATTTTAGGTTTGATTCAACTGAATAATATGAATAGAGAATTGATTAGTGGGAACAATAAGATGAAAATGAAAGTAGGATTTAGCGAAGCATCACGATTCACTTGGCTTGTTGAAGAGGAGATTTATCTTTGGGGAAAGGATGAAATACTGAAATGAAAGATATCTAACTATATGCATTTCTTTCTTGCAGGGGATTATATACAGTCTGCTGGACAAAAAAAAGGAAGCTGCTGAGCAGTTCGAAACATATCAGGCCCTTGTGCCTGATGAATTTCCTCAAAGGGAATTTATTGATGACGTTATGTTGTCGGCTACGACTGCATCACGGGAACAGTTCCAGAAGGAATTTGATGCTGAATTTACAAACAAGAAGTGAAGCCAAGAAGAAAAGGGTACTCTGATTATTAGTTTGAGAGTGTATCGAATGGGTTCATACCACTGCCAACACACCTGACTACTAAAACTCTGTAGTTAACCGTGCTTGTGCCATGTCGGGCAAACAAAAGTTGTTGAGGGTGATCTTTAATCGTCGGTAGTGAAATCAGGTTGTAATGGCTAAAATATAAACTATTGGACTCGTATTGGCTGCTTGATGAAAATGAACAAGAAAGACTGCACGCAGTGGAGCGCTTGCTCAGAATCTAGTTCCTTGACTGAAAATTTAGTTCAACAATATCATGGAGGAAACAAAGTAGAAATGGAGATTATCTGGAGCTGTTTTTATGAGTGCAGTGGAAGAATGGTTTGTTCAAAATAGTTGTACAAGTTGAATTTGAAGTAGTTCAGCGAGCAAACGGACCTGATTTGCTTTACTTTACTCCCCCCTCTCTCTCTCACTCTTCTTTTGAATCTTTTCGATTTATGAGAGTTCTAAATTATCTGAATCTGGAATTTTCATATTTAGTTGATGAAACGTGATGCCAACTTTGTTCTGGTTCTATCAACCACACGTTGATATATATACACATATATATTTGAAATACAAAATAAACAATTTTAAGCAAGAACAATTTATGTACTTTCAAGGATTTACACCTTGATTTTAATATGTGCTCGTTAACTCTTGTACATAATCATTTAATTTCTATCATGAATAGCAGTATT

mRNA sequence

AATAAAAGTCCCGGTAGCCGTTCGGCTATTCGTCAGAAATGGGTTCAACTTCAGCTTCAACTTTCTCAGTTTCATCTCAAATTGAACTTCCCAGACCACCCAAATTCTCAAGCTACAATGTCCGGGCATTGTCTAAGTGTCAATATAACATTCTTCAGAAGAATTACAAACTATCCTCCCAAAGCTTGTTCTGCTCACATGCGAAAATTTTTCATTCCCCCATTCACAATACCCCCTTCTCAAACCTCTCTGAGTCCGATATACGTCGTTTTAACTCACCCCAGATAAAAATTTCGAAGTATTTCATTGAAAAATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATGTAAGATATGTCAGGGCATTGCCTGCTCAGACAAGTAACAAAAACCCGATATTGGCTGAAAAAGCTCAAGTTCCAGAGGAGGATAGTGAAGAGGTGATGTGGGAGAGGATCTTGGAGCATGATCCAAGTAATGTTGATACTCTGAAAGCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGAACGCCGTTAAGTATGTTAAGAGGTTGATTGATCTTGAGCCTGATGAGGTTGAATGGAGAATTTTGTTGGCTCTTTGTTATGAGATATTGGGGGAGCTGGGCACGGCTAAAAGATTGTTCATGGAAATTCTGAAGCAGAAACCTCTTTTGGTTAGAGCTCTGCATGGTTTGGCGTTAGTGATGCATAAGAACAATGAAGGTGAATCTGTCTTTGAGATGCTCAATAAGGCACTAGATATTGCTCGTGATGAGAAAAAACTTACCGAACATAGAAGCATCGGGATACTAATTGCTCAAATGCATGTTGTGAAGGGGGAACTGGAAGAGGGCTTGAAGAAGTTCCAAAATCTTGTTGAGGAAAACCCAAGGGATTTTCGACCCCATCTCTGCCAGGGGATTATATACAGTCTGCTGGACAAAAAAAAGGAAGCTGCTGAGCAGTTCGAAACATATCAGGCCCTTGTGCCTGATGAATTTCCTCAAAGGGAATTTATTGATGACGTTATGTTGTCGGCTACGACTGCATCACGGGAACAGTTCCAGAAGGAATTTGATGCTGAATTTACAAACAAGAAGTGAAGCCAAGAAGAAAAGGGTACTCTGATTATTAGTTTGAGAGTGTATCGAATGGGTTCATACCACTGCCAACACACCTGACTACTAAAACTCTGTAGTTAACCGTGCTTGTGCCATGTCGGGCAAACAAAAGTTGTTGAGGGTGATCTTTAATCGTCGGTAGTGAAATCAGGTTGTAATGGCTAAAATATAAACTATTGGACTCGTATTGGCTGCTTGATGAAAATGAACAAGAAAGACTGCACGCAGTGGAGCGCTTGCTCAGAATCTAGTTCCTTGACTGAAAATTTAGTTCAACAATATCATGGAGGAAACAAAGTAGAAATGGAGATTATCTGGAGCTGTTTTTATGAGTGCAGTGGAAGAATGGTTTGTTCAAAATAGTTGTACAAGTTGAATTTGAAGTAGTTCAGCGAGCAAACGGACCTGATTTGCTTTACTTTACTCCCCCCTCTCTCTCTCACTCTTCTTTTGAATCTTTTCGATTTATGAGAGTTCTAAATTATCTGAATCTGGAATTTTCATATTTAGTTGATGAAACGTGATGCCAACTTTGTTCTGGTTCTATCAACCACACGTTGATATATATACACATATATATTTGAAATACAAAATAAACAATTTTAAGCAAGAACAATTTATGTACTTTCAAGGATTTACACCTTGATTTTAATATGTGCTCGTTAACTCTTGTACATAATCATTTAATTTCTATCATGAATAGCAGTATT

Coding sequence (CDS)

ATGGGTTCAACTTCAGCTTCAACTTTCTCAGTTTCATCTCAAATTGAACTTCCCAGACCACCCAAATTCTCAAGCTACAATGTCCGGGCATTGTCTAAGTGTCAATATAACATTCTTCAGAAGAATTACAAACTATCCTCCCAAAGCTTGTTCTGCTCACATGCGAAAATTTTTCATTCCCCCATTCACAATACCCCCTTCTCAAACCTCTCTGAGTCCGATATACGTCGTTTTAACTCACCCCAGATAAAAATTTCGAAGTATTTCATTGAAAAATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATGTAAGATATGTCAGGGCATTGCCTGCTCAGACAAGTAACAAAAACCCGATATTGGCTGAAAAAGCTCAAGTTCCAGAGGAGGATAGTGAAGAGGTGATGTGGGAGAGGATCTTGGAGCATGATCCAAGTAATGTTGATACTCTGAAAGCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGAACGCCGTTAAGTATGTTAAGAGGTTGATTGATCTTGAGCCTGATGAGGTTGAATGGAGAATTTTGTTGGCTCTTTGTTATGAGATATTGGGGGAGCTGGGCACGGCTAAAAGATTGTTCATGGAAATTCTGAAGCAGAAACCTCTTTTGGTTAGAGCTCTGCATGGTTTGGCGTTAGTGATGCATAAGAACAATGAAGGTGAATCTGTCTTTGAGATGCTCAATAAGGCACTAGATATTGCTCGTGATGAGAAAAAACTTACCGAACATAGAAGCATCGGGATACTAATTGCTCAAATGCATGTTGTGAAGGGGGAACTGGAAGAGGGCTTGAAGAAGTTCCAAAATCTTGTTGAGGAAAACCCAAGGGATTTTCGACCCCATCTCTGCCAGGGGATTATATACAGTCTGCTGGACAAAAAAAAGGAAGCTGCTGAGCAGTTCGAAACATATCAGGCCCTTGTGCCTGATGAATTTCCTCAAAGGGAATTTATTGATGACGTTATGTTGTCGGCTACGACTGCATCACGGGAACAGTTCCAGAAGGAATTTGATGCTGAATTTACAAACAAGAAGTGA

Protein sequence

MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHSPIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTSNKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLIDLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESVFEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTNKK*

Homology

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BLAST of CsGy6G026460 vs. ExPASy Swiss-Prot
Match: Q9LS48 (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 9.6e-38
Identity = 106/296 (35.81%), Postives = 166/296 (56.08%), Query Frame = 0


Query: 46  SSQSLFCSHAKIFHSPIHNTPFSNLSESDIR-RFNSPQIKISKYFIEKFVGF-----LVG 105
           +S SL  S   +  +P+            IR R +S Q      F EKF  F     L+G
Sbjct: 7   ASSSLVSSFVAVKATPVTGPLIPRRDLLSIRIRASSNQNSSGYCFPEKFKSFAKSAILIG 66

Query: 106 SFIFM-GCFNVRYVRA-LPAQTSNKNPILAEKAQVPEEDSEEVM-WERILEHDPSNVDTL 165
           + + M G F+   V+A  P  T  K        +V EE   E+     +L+  P  V+TL
Sbjct: 67  AAVSMTGKFSTLPVKAESPVTTIEKT-----YEEVKEEKLSEITPLSELLDSTPEAVETL 126

Query: 166 KAVLYGKMRSGKTENAVKYVKRLIDLEPDEVEWRILLALCYEILGELG---TAKRLFMEI 225
           +++L  K+  G+ E A+K ++RL+  +P+E EW+ L+A    +LGE+G    A+++F EI
Sbjct: 127 RSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMA---RLLGEMGRPENARQMFEEI 186

Query: 226 LKQKPLLVRALHGLALVMHKNNEGESVFEMLNKALDIARDEKKLTEHRSIGILIAQMHVV 285
           L++ PL   AL   AL+M ++ EG +V + L  AL +A  E  + E R + ++IAQ+H +
Sbjct: 187 LQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKEARDVRLIIAQIHFL 246

Query: 286 KGELEEGLKKFQNLVEENPRDFRPHLCQGIIYSLLDKKKEAAEQFETYQALVPDEF 330
           +  ++E LK ++ L +E+P+DFRP+ C+G+IYSLLDK  EA EQF  Y+ L P +F
Sbjct: 247 QKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYRELSPKKF 294

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BLAST of CsGy6G026460 vs. NCBI nr
Match: XP_004141968.1 (protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KGN48419.1 hypothetical protein Csa_003836 [Cucumis sativus])

HSP 1 Score: 706 bits (1823), Expect = 2.38e-256
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 0


Query: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60
           MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS
Sbjct: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60

Query: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120
           PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS
Sbjct: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120

Query: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180
           NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI
Sbjct: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180

Query: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240
           DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV
Sbjct: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300
           FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC
Sbjct: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360
           QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN
Sbjct: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360

Query: 361 KK 362
           KK
Sbjct: 361 KK 362

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BLAST of CsGy6G026460 vs. NCBI nr
Match: XP_008440127.1 (PREDICTED: LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic [Cucumis melo] >TYK12974.1 protein SLOW GREEN 1 [Cucumis melo var. makuwa])

HSP 1 Score: 635 bits (1637), Expect = 4.89e-228
Identity = 330/362 (91.16%), Postives = 341/362 (94.20%), Query Frame = 0


Query: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60
           M STS S FSVSSQIELP PPKFSSYNVRALS  +++ILQKNYKLSSQSLF S  KIFHS
Sbjct: 1   MASTSTSAFSVSSQIELPGPPKFSSYNVRALSNFRFSILQKNYKLSSQSLFYS-PKIFHS 60

Query: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120
           PIHNT FSNLSESDIRR  SPQIK+SKY +EKFVGFLVGSFIFMGCFN+RY RALPAQTS
Sbjct: 61  PIHNTLFSNLSESDIRRSTSPQIKLSKYIVEKFVGFLVGSFIFMGCFNLRYARALPAQTS 120

Query: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180
           +KNP LAEKAQ+PE DSEE MWERILEHDPSNVDTLKAVLYGKMRSGKTE A+KYVKRLI
Sbjct: 121 SKNPTLAEKAQIPEGDSEE-MWERILEHDPSNVDTLKAVLYGKMRSGKTEEAIKYVKRLI 180

Query: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240
           DLEPDEVEWR+LLALCYE LGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV
Sbjct: 181 DLEPDEVEWRLLLALCYETLGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300
           FEMLNKALDIARDEKKL EHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC
Sbjct: 241 FEMLNKALDIARDEKKLAEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360
           QGIIYSLLDKKKEAAEQFE YQALVPDEFPQREFIDD+MLSATTASREQFQKEFDAEFTN
Sbjct: 301 QGIIYSLLDKKKEAAEQFEIYQALVPDEFPQREFIDDIMLSATTASREQFQKEFDAEFTN 360

Query: 361 KK 362
           KK
Sbjct: 361 KK 360

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BLAST of CsGy6G026460 vs. NCBI nr
Match: XP_038880966.1 (protein SLOW GREEN 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 584 bits (1505), Expect = 6.71e-208
Identity = 303/362 (83.70%), Postives = 328/362 (90.61%), Query Frame = 0


Query: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60
           MGSTS S FSVSSQIEL   PKFSSYNVRAL  C+++ILQKN+K +SQSLF S AK FHS
Sbjct: 1   MGSTSTSAFSVSSQIELLHGPKFSSYNVRALPNCRFSILQKNHKPTSQSLFYSAAKNFHS 60

Query: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120
           PIHN PFSNLSESDIRR  S QIKI K+++E+FVGFLVGSFIFMGCFNVRY RALP QTS
Sbjct: 61  PIHNPPFSNLSESDIRRSTSTQIKIHKHYVERFVGFLVGSFIFMGCFNVRYARALPTQTS 120

Query: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180
           +KNP +AEK+Q  EEDSEE M ERILEHDPSN+DTLKAVLYGKMRSGKTE A+KYVKRLI
Sbjct: 121 SKNPTMAEKSQALEEDSEEEMRERILEHDPSNIDTLKAVLYGKMRSGKTEEAIKYVKRLI 180

Query: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240
           DLEPDEVEWR+LLAL YE  G+L TAK LFMEIL++KPLLVRALHGLALVMHKNNEGESV
Sbjct: 181 DLEPDEVEWRLLLALYYETFGQLDTAKTLFMEILEKKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300
           FEMLNKAL IARDEKKLTE RSIGILIAQMHVVKGELEEGLKKFQ+LV+ENPRDFRP+LC
Sbjct: 241 FEMLNKALAIARDEKKLTEQRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLC 300

Query: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360
           QGIIYSLLDKKKEAAEQFE Y+ALVPDEFPQREFIDDV+L+A TASREQFQKEFDAEF +
Sbjct: 301 QGIIYSLLDKKKEAAEQFEAYRALVPDEFPQREFIDDVVLAAMTASREQFQKEFDAEFMH 360

Query: 361 KK 362
           KK
Sbjct: 361 KK 362

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BLAST of CsGy6G026460 vs. NCBI nr
Match: KAG6595098.1 (protein SLOW GREEN 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 504 bits (1298), Expect = 1.50e-176
Identity = 273/362 (75.41%), Postives = 305/362 (84.25%), Query Frame = 0


Query: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60
           MGSTSA  FSV S+IELP  PKFS YNVR   K ++ + +KNY  +S+SL  S +K F+S
Sbjct: 1   MGSTSA--FSVFSKIELP-VPKFSGYNVRPSPKFRFTMFRKNYNPTSKSLIHSISKHFNS 60

Query: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120
            IH+ PFSNLSESD R F + Q   S YF+EK VGFLV  FIFMGCFNVR+V ALPAQTS
Sbjct: 61  HIHDAPFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALPAQTS 120

Query: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180
            K+P +       +EDSEE M ERILEHD  N+DTLKAVLYGKM SGKTE A+KYV RLI
Sbjct: 121 GKSPTM-------DEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLI 180

Query: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240
           DLEPDEVEWR+LLALCYE +GEL  AK LF+EIL++ PLLVRALHGLALVMHKNNEG+SV
Sbjct: 181 DLEPDEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSV 240

Query: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300
           FEMLNKALDIARD KK+TE RSIGILIAQMHVVKGELEEGLKKFQ LVEENPRDFRP+LC
Sbjct: 241 FEMLNKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLC 300

Query: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360
           QGIIYSLLD+K+EAAEQFETY+ALVPDEFPQREF+DDVMLSATTA+REQFQKEFDAEF+ 
Sbjct: 301 QGIIYSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSY 352

Query: 361 KK 362
           KK
Sbjct: 361 KK 352

[Close]

BLAST of CsGy6G026460 vs. NCBI nr
Match: XP_022963051.1 (protein SLOW GREEN 1, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 502 bits (1293), Expect = 8.62e-176
Identity = 272/362 (75.14%), Postives = 304/362 (83.98%), Query Frame = 0


Query: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60
           MGS SA  FSV S+IELP P KFS YNVR   K ++ + +KNY  +S+SL  S +K F+S
Sbjct: 1   MGSISA--FSVCSKIELPGP-KFSGYNVRPSPKFRFTMFRKNYNPTSKSLIHSISKHFNS 60

Query: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120
            IH+ PFSNLSESD R F + Q   S YF+EK VGFLV  FIFMGCFNVR+V ALPAQTS
Sbjct: 61  HIHDAPFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALPAQTS 120

Query: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180
            K+P +       +EDSEE M ERILEHD  N+DTLKAVLYGKM SGKTE A+KYV RLI
Sbjct: 121 GKSPTM-------DEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLI 180

Query: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240
           DLEPDEVEWR+LLALCYE +GEL  AK LF+EIL++ PLLVRALHGLALVMHKNNEG+SV
Sbjct: 181 DLEPDEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSV 240

Query: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300
           FEMLNKALDIARD KK+TE RSIGILIAQMHVVKGELEEGLKKFQ LVEENPRDFRP+LC
Sbjct: 241 FEMLNKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLC 300

Query: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360
           QGIIYSLLD+K+EAAEQFETY+ALVPDEFPQREF+DDVMLSATTA+REQFQKEFDAEF+ 
Sbjct: 301 QGIIYSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSY 352

Query: 361 KK 362
           KK
Sbjct: 361 KK 352

[Close]

BLAST of CsGy6G026460 vs. ExPASy TrEMBL
Match: A0A0A0KHZ0 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486920 PE=4 SV=1)

HSP 1 Score: 706 bits (1823), Expect = 1.15e-256
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 0


Query: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60
           MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS
Sbjct: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60

Query: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120
           PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS
Sbjct: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120

Query: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180
           NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI
Sbjct: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180

Query: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240
           DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV
Sbjct: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300
           FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC
Sbjct: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360
           QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN
Sbjct: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360

Query: 361 KK 362
           KK
Sbjct: 361 KK 362

[Close]

BLAST of CsGy6G026460 vs. ExPASy TrEMBL
Match: A0A5D3CPL4 (Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005710 PE=4 SV=1)

HSP 1 Score: 635 bits (1637), Expect = 2.37e-228
Identity = 330/362 (91.16%), Postives = 341/362 (94.20%), Query Frame = 0


Query: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60
           M STS S FSVSSQIELP PPKFSSYNVRALS  +++ILQKNYKLSSQSLF S  KIFHS
Sbjct: 1   MASTSTSAFSVSSQIELPGPPKFSSYNVRALSNFRFSILQKNYKLSSQSLFYS-PKIFHS 60

Query: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120
           PIHNT FSNLSESDIRR  SPQIK+SKY +EKFVGFLVGSFIFMGCFN+RY RALPAQTS
Sbjct: 61  PIHNTLFSNLSESDIRRSTSPQIKLSKYIVEKFVGFLVGSFIFMGCFNLRYARALPAQTS 120

Query: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180
           +KNP LAEKAQ+PE DSEE MWERILEHDPSNVDTLKAVLYGKMRSGKTE A+KYVKRLI
Sbjct: 121 SKNPTLAEKAQIPEGDSEE-MWERILEHDPSNVDTLKAVLYGKMRSGKTEEAIKYVKRLI 180

Query: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240
           DLEPDEVEWR+LLALCYE LGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV
Sbjct: 181 DLEPDEVEWRLLLALCYETLGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300
           FEMLNKALDIARDEKKL EHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC
Sbjct: 241 FEMLNKALDIARDEKKLAEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360
           QGIIYSLLDKKKEAAEQFE YQALVPDEFPQREFIDD+MLSATTASREQFQKEFDAEFTN
Sbjct: 301 QGIIYSLLDKKKEAAEQFEIYQALVPDEFPQREFIDDIMLSATTASREQFQKEFDAEFTN 360

Query: 361 KK 362
           KK
Sbjct: 361 KK 360

[Close]

BLAST of CsGy6G026460 vs. ExPASy TrEMBL
Match: A0A1S3B0E6 (LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484686 PE=4 SV=1)

HSP 1 Score: 635 bits (1637), Expect = 2.37e-228
Identity = 330/362 (91.16%), Postives = 341/362 (94.20%), Query Frame = 0


Query: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60
           M STS S FSVSSQIELP PPKFSSYNVRALS  +++ILQKNYKLSSQSLF S  KIFHS
Sbjct: 1   MASTSTSAFSVSSQIELPGPPKFSSYNVRALSNFRFSILQKNYKLSSQSLFYS-PKIFHS 60

Query: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120
           PIHNT FSNLSESDIRR  SPQIK+SKY +EKFVGFLVGSFIFMGCFN+RY RALPAQTS
Sbjct: 61  PIHNTLFSNLSESDIRRSTSPQIKLSKYIVEKFVGFLVGSFIFMGCFNLRYARALPAQTS 120

Query: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180
           +KNP LAEKAQ+PE DSEE MWERILEHDPSNVDTLKAVLYGKMRSGKTE A+KYVKRLI
Sbjct: 121 SKNPTLAEKAQIPEGDSEE-MWERILEHDPSNVDTLKAVLYGKMRSGKTEEAIKYVKRLI 180

Query: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240
           DLEPDEVEWR+LLALCYE LGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV
Sbjct: 181 DLEPDEVEWRLLLALCYETLGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300
           FEMLNKALDIARDEKKL EHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC
Sbjct: 241 FEMLNKALDIARDEKKLAEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360
           QGIIYSLLDKKKEAAEQFE YQALVPDEFPQREFIDD+MLSATTASREQFQKEFDAEFTN
Sbjct: 301 QGIIYSLLDKKKEAAEQFEIYQALVPDEFPQREFIDDIMLSATTASREQFQKEFDAEFTN 360

Query: 361 KK 362
           KK
Sbjct: 361 KK 360

[Close]

BLAST of CsGy6G026460 vs. ExPASy TrEMBL
Match: A0A6J1HF02 (protein SLOW GREEN 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463369 PE=4 SV=1)

HSP 1 Score: 502 bits (1293), Expect = 4.17e-176
Identity = 272/362 (75.14%), Postives = 304/362 (83.98%), Query Frame = 0


Query: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60
           MGS SA  FSV S+IELP P KFS YNVR   K ++ + +KNY  +S+SL  S +K F+S
Sbjct: 1   MGSISA--FSVCSKIELPGP-KFSGYNVRPSPKFRFTMFRKNYNPTSKSLIHSISKHFNS 60

Query: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120
            IH+ PFSNLSESD R F + Q   S YF+EK VGFLV  FIFMGCFNVR+V ALPAQTS
Sbjct: 61  HIHDAPFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALPAQTS 120

Query: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180
            K+P +       +EDSEE M ERILEHD  N+DTLKAVLYGKM SGKTE A+KYV RLI
Sbjct: 121 GKSPTM-------DEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLI 180

Query: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240
           DLEPDEVEWR+LLALCYE +GEL  AK LF+EIL++ PLLVRALHGLALVMHKNNEG+SV
Sbjct: 181 DLEPDEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSV 240

Query: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300
           FEMLNKALDIARD KK+TE RSIGILIAQMHVVKGELEEGLKKFQ LVEENPRDFRP+LC
Sbjct: 241 FEMLNKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLC 300

Query: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360
           QGIIYSLLD+K+EAAEQFETY+ALVPDEFPQREF+DDVMLSATTA+REQFQKEFDAEF+ 
Sbjct: 301 QGIIYSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSY 352

Query: 361 KK 362
           KK
Sbjct: 361 KK 352

[Close]

BLAST of CsGy6G026460 vs. ExPASy TrEMBL
Match: A0A6J1BU39 (protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005371 PE=4 SV=1)

HSP 1 Score: 498 bits (1283), Expect = 1.44e-174
Identity = 264/362 (72.93%), Postives = 299/362 (82.60%), Query Frame = 0


Query: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60
           MGSTS S F V SQI LP P K SSYNVR     ++  L+KNY           AK FH 
Sbjct: 1   MGSTSTSAFLVCSQIILPGP-KVSSYNVRKSPNSRFIGLRKNYNAV--------AKFFHF 60

Query: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120
           P  N P S LSESD  R +  Q  +SKYF+EKFV  L+GSFIFMGCFNVRY  ALPAQ S
Sbjct: 61  PTLNPPVSKLSESDSCRSSPSQRNLSKYFLEKFVALLIGSFIFMGCFNVRYAMALPAQRS 120

Query: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180
           +K+P L EK     EDSEE M ERILEH+P N+DTLKAVLYGKMRSGKT+ A+KYV+RLI
Sbjct: 121 SKSPTLDEKTDTLSEDSEEEMRERILEHEPRNIDTLKAVLYGKMRSGKTKEAIKYVQRLI 180

Query: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240
           DLEP+EVEWR+L+ALCYE +G+L TAKRLFMEIL++KPLLVRALHGLALVMHKN EG+SV
Sbjct: 181 DLEPEEVEWRLLMALCYETMGQLDTAKRLFMEILEKKPLLVRALHGLALVMHKNKEGQSV 240

Query: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300
           F+MLNKALDIARDEKK+TE RSIGILIAQMHVVKGELEEGLKKFQ+LV+ENPRDFRP+LC
Sbjct: 241 FDMLNKALDIARDEKKVTEQRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLC 300

Query: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360
           QGIIYSLLDKK+EAAEQFE Y+A+VPDEFPQ+EFIDD++LSATTASREQF+KEF AEF+ 
Sbjct: 301 QGIIYSLLDKKREAAEQFEMYRAVVPDEFPQKEFIDDIVLSATTASREQFEKEFAAEFSY 353

Query: 361 KK 362
           KK
Sbjct: 361 KK 353

[Close]

BLAST of CsGy6G026460 vs. TAIR 10
Match: AT4G39470.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 292.4 bits (747), Expect = 5.2e-79
Identity = 150/285 (52.63%), Postives = 212/285 (74.39%), Query Frame = 0


Query: 79  NSPQIKISKYFIE----KFVGFLVGSFIFMGCFNVRYVRALPAQTSNKNPILAEKAQVPE 138
           +S  +  SK F++    K    LVGSF+F+G  + +   ALP  T      +  +A++  
Sbjct: 65  SSTSLLSSKDFVQMLARKAAILLVGSFVFLGFCSSKPALALPTAT------VVSQAEL-- 124

Query: 139 EDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLIDLEPDEVEWRILLA 198
              +E M+E++LE++P N++ +KAV+Y KMR GK E+AVKYV++L+ LEP EVEW++L A
Sbjct: 125 --EDEKMFEKLLENEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEA 184

Query: 199 LCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESVFEMLNKALDIARDE 258
           LCYE +GEL  AKRL+ +ILK++PLL+RALHGLA+VMHK ++  SVF+ML +A+++AR  
Sbjct: 185 LCYETMGELSKAKRLYKDILKEQPLLIRALHGLAMVMHKTHD-TSVFDMLIEAMEVARQG 244

Query: 259 KKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQGIIYSLLDKKKEA 318
            ++TE R+I +LI QMH+V+G+ EEGLK FQ +V +NPRDFRP+LCQGI+YSL+DKK+EA
Sbjct: 245 NRVTEERNIQVLIGQMHIVEGQFEEGLKIFQQMVNDNPRDFRPYLCQGIVYSLMDKKEEA 304

Query: 319 AEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFT 360
           A+QFE Y +LVP EFPQ+ F+DDV L+A   SRE+ Q  F A+FT
Sbjct: 305 AQQFEIYWSLVPGEFPQKGFLDDVALAAQAKSRERLQNTFKAKFT 338

[Close]

BLAST of CsGy6G026460 vs. TAIR 10
Match: AT3G53560.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 3.1e-39
Identity = 94/235 (40.00%), Postives = 139/235 (59.15%), Query Frame = 0


Query: 124 PILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLIDLE 183
           P +  K  V  E+ E  + E ++ H PS+VD L++++  K++S K   AV+ + RLI LE
Sbjct: 102 PSVESKENVTLEEEERALDEHLITH-PSDVDALRSLMEVKIKSRKLTEAVEVIDRLIKLE 161

Query: 184 PDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNN-EGESVFE 243
           P+E EW +L A  +   G+L  AK  F EIL + PL V A HGL +       + + V  
Sbjct: 162 PEEKEWPVLKANIFTYSGDLDLAKTGFEEILAKDPLRVEAYHGLLMAYSDAGLDLKEVES 221

Query: 244 MLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQG 303
            + +A+   + E    + R   +L+AQ+ V++G+  E LK +Q LV+E PRDFRP+LCQG
Sbjct: 222 RIEEAMLKCKKENNQNDFRDFKLLVAQIRVIEGKHSEALKLYQELVKEEPRDFRPYLCQG 281

Query: 304 IIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAE 358
           IIY+LL KK +A EQF+ ++ LVP   P RE+  D M+ AT    E+ Q+E   E
Sbjct: 282 IIYTLLKKKDKAEEQFDNFRKLVPKNHPYREYFMDNMI-ATKLFSEKAQREMAEE 334

[Close]

BLAST of CsGy6G026460 vs. TAIR 10
Match: AT3G18420.1 (Protein prenylyltransferase superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 6.8e-39
Identity = 106/296 (35.81%), Postives = 166/296 (56.08%), Query Frame = 0


Query: 46  SSQSLFCSHAKIFHSPIHNTPFSNLSESDIR-RFNSPQIKISKYFIEKFVGF-----LVG 105
           +S SL  S   +  +P+            IR R +S Q      F EKF  F     L+G
Sbjct: 7   ASSSLVSSFVAVKATPVTGPLIPRRDLLSIRIRASSNQNSSGYCFPEKFKSFAKSAILIG 66

Query: 106 SFIFM-GCFNVRYVRA-LPAQTSNKNPILAEKAQVPEEDSEEVM-WERILEHDPSNVDTL 165
           + + M G F+   V+A  P  T  K        +V EE   E+     +L+  P  V+TL
Sbjct: 67  AAVSMTGKFSTLPVKAESPVTTIEKT-----YEEVKEEKLSEITPLSELLDSTPEAVETL 126

Query: 166 KAVLYGKMRSGKTENAVKYVKRLIDLEPDEVEWRILLALCYEILGELG---TAKRLFMEI 225
           +++L  K+  G+ E A+K ++RL+  +P+E EW+ L+A    +LGE+G    A+++F EI
Sbjct: 127 RSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMA---RLLGEMGRPENARQMFEEI 186

Query: 226 LKQKPLLVRALHGLALVMHKNNEGESVFEMLNKALDIARDEKKLTEHRSIGILIAQMHVV 285
           L++ PL   AL   AL+M ++ EG +V + L  AL +A  E  + E R + ++IAQ+H +
Sbjct: 187 LQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKEARDVRLIIAQIHFL 246

Query: 286 KGELEEGLKKFQNLVEENPRDFRPHLCQGIIYSLLDKKKEAAEQFETYQALVPDEF 330
           +  ++E LK ++ L +E+P+DFRP+ C+G+IYSLLDK  EA EQF  Y+ L P +F
Sbjct: 247 QKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYRELSPKKF 294

[Close]

BLAST of CsGy6G026460 vs. TAIR 10
Match: AT2G37400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 151.4 bits (381), Expect = 1.4e-36
Identity = 84/219 (38.36%), Postives = 135/219 (61.64%), Query Frame = 0


Query: 136 DSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLIDLEPDEVEWRILLAL 195
           + EE   E  L   P +V+ L++++  +++S K   A++ + RLI+LEP+E EW +L A 
Sbjct: 113 EEEERSLEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKAN 172

Query: 196 CYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEG-ESVFEMLNKALDIARDE 255
            +   G+L +AK  F EIL + PL V A HGL +    + +   +V + + +A+   + E
Sbjct: 173 IFSYSGDLESAKTGFEEILVKDPLRVEAYHGLVMAYSDSGDDLNAVEKRIEEAMVRCKKE 232

Query: 256 KKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQGIIYSLLDKKKEA 315
           K   + R   +L+AQ+ V++G+  E LK ++ LV+E PRDFRP+LCQGIIY++L K+ EA
Sbjct: 233 KNRKDLRDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGIIYTVLKKENEA 292

Query: 316 AEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKE 354
            +QFE ++ LVP   P RE+  D M+ A+    E+ Q+E
Sbjct: 293 EKQFEKFRRLVPKNHPYREYFMDNMV-ASKLFAEKVQRE 330

[Close]

BLAST of CsGy6G026460 vs. TAIR 10
Match: AT5G02590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 149.1 bits (375), Expect = 7.1e-36
Identity = 77/210 (36.67%), Postives = 134/210 (63.81%), Query Frame = 0


Query: 133 PEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLIDLEPDEVEWRIL 192
           P+E+ EE   E+ L  +P++V+ L++++  K ++   ++A++ + RLI+++P+E EWRIL
Sbjct: 109 PKEEEEEAALEKHLTKNPNDVEALQSLMKIKFQTKNIDHALEILNRLIEIQPEEQEWRIL 168

Query: 193 LALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESVFE-MLNKALDIA 252
            A      G+  +A + F E+L + P  V A HGL +   ++    S  E  +N+A++  
Sbjct: 169 KAQVQTYGGDFDSATKGFEEVLSKDPFRVEAYHGLVMAYSESESKLSEIESRINEAIEKC 228

Query: 253 RDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQGIIYSLLDKK 312
           + E K  + R   +LIAQ+ V+KG   E L+ +Q LV++ P+DFRP+LCQG+IY+L+ KK
Sbjct: 229 KKENK-KDFRDFMLLIAQIRVIKGNPIEALRVYQELVKDEPKDFRPYLCQGLIYTLMKKK 288

Query: 313 KEAAEQFETYQALVPDEFPQREFIDDVMLS 342
            EA +QF  ++ LVP+  P +E++D  +L+
Sbjct: 289 DEAEKQFAEFRRLVPENHPYKEYLDANVLN 317

The following BLAST results are available for this feature:

BLAST of CsGy6G026460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS48	9.6e-38	35.81	protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 ...	[more]

BLAST of CsGy6G026460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141968.1	2.38e-256	100.00	protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KGN48419.1 hypothetical p...	[more]
XP_008440127.1	4.89e-228	91.16	PREDICTED: LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic [Cucumis mel...	[more]
XP_038880966.1	6.71e-208	83.70	protein SLOW GREEN 1, chloroplastic [Benincasa hispida]	[more]
KAG6595098.1	1.50e-176	75.41	protein SLOW GREEN 1, chloroplastic, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022963051.1	8.62e-176	75.14	protein SLOW GREEN 1, chloroplastic isoform X2 [Cucurbita moschata]	[more]

BLAST of CsGy6G026460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHZ0	1.15e-256	100.00	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486920 ...	[more]
A0A5D3CPL4	2.37e-228	91.16	Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255...	[more]
A0A1S3B0E6	2.37e-228	91.16	LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656...	[more]
A0A6J1HF02	4.17e-176	75.14	protein SLOW GREEN 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1BU39	1.44e-174	72.93	protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110053...	[more]

BLAST of CsGy6G026460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39470.1	5.2e-79	52.63	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53560.1	3.1e-39	40.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G18420.1	6.8e-39	35.81	Protein prenylyltransferase superfamily protein	[more]
AT2G37400.1	1.4e-36	38.36	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G02590.1	7.1e-36	36.67	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 263..339 e-value: 1.3E-5 score: 26.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 135..262 e-value: 6.0E-17 score: 63.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 142..327
None	No IPR available	PFAM	PF13432	TPR_16	coord: 164..206 e-value: 0.0041 score: 17.8
None	No IPR available	PANTHER	PTHR26312:SF137	OS05G0182100 PROTEIN	coord: 1..354
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 1..354

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G026460.2	CsGy6G026460.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding