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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. AAAGGCCAAACACTTAACAATTCTACAAGAGAGAAAAGGAAAAAACTCAGCAACTACTTTAATATGCACGTAATCCAATTATCACGGCCCGAGTTTTACTCAGTAATAATATACTAAACACTGAACATGGTCTACAACAAATGAGTCGGCAGAAATATAATATACAAATAATTTTATGTGCAGAAGACCAACTCAACTACCAACCTCAGGAATGTACCAAAGACACTGGTTTTTGCATGTTCTAAAATTTTTATGTCCAATTAGTTCACACGACTTTAGATTAAAGAAAGAAAAATGGAGCCAAAATAAGAGGAAGTGATGGGAATAATCAAATACAGGAATCACAACCCAAGGAAGCAAGGTTCGAAGGCTATACCTCGAGATCACCGCAAAGCAACAGCAAAATTCAACAGTGTCACCGACCCGGCTAAGAATATGGCTAATGAAATGAAACTTCTCAAGAGTCAATTGCCACGTCTTTTAGAAAAGTATAAAAAAAACCCAAAAAACCAACCCAAGTTCTTTGTATCGAGCTCAAGTCCAATGGAGGGAGGAAAGACCAGTCTCTACATAAATAAGAGAAAATGGCGGGGGAAGGGAAAAAAAAGAAGAATTGGGGTAAAAGCAAAACAGATGTCAGTTGTTGTAGCGAAGAGGAAAAGAGCCTCGAGATCTGTGTTCGAAATTGTAAGCGCACGAGCGACAAACAAGAGCGGCGCGGTCCGATAAACAGAAGCCTGTGGCTGTTGTTTTGCTTCTGCAGCCACTCTGTGCTCGCCTACTTATCTGCAAAGCACACTAA mRNA sequence AAAGGCCAAACACTTAACAATTCTACAAGAGAGAAAAGGAAAAAACTCAGCAACTACTTTAATATGCACGTAATCCAATTATCACGGCCCGAGTTTTACTCAGTAATAATATACTAAACACTGAACATGGTCTACAACAAATGAGTCGGCAGAAATATAATATACAAATAATTTTATGTGCAGAAGACCAACTCAACTACCAACCTCAGGAATGTACCAAAGACACTGGTTTTTGCATGTTCTAAAATTTTTATGTCCAATTAGTTCACACGACTTTAGATTAAAGAAAGAAAAATGGAGCCAAAATAAGAGGAAGTGATGGGAATAATCAAATACAGGAATCACAACCCAAGGAAGCAAGGTTCGAAGGCTATACCTCGAGATCACCGCAAAGCAACAGCAAAATTCAACAGTGTCACCGACCCGGCTAAGAATATGGCTAATGAAATGAAACTTCTCAAGAGTCAATTGCCACCGCACGAGCGACAAACAAGAGCGGCGCGGTCCGATAAACAGAAGCCTGTGGCTGTTGTTTTGCTTCTGCAGCCACTCTGTGCTCGCCTACTTATCTGCAAAGCACACTAA Coding sequence (CDS) ATGGGAATAATCAAATACAGGAATCACAACCCAAGGAAGCAAGGTTCGAAGGCTATACCTCGAGATCACCGCAAAGCAACAGCAAAATTCAACAGTGTCACCGACCCGGCTAAGAATATGGCTAATGAAATGAAACTTCTCAAGAGTCAATTGCCACCGCACGAGCGACAAACAAGAGCGGCGCGGTCCGATAAACAGAAGCCTGTGGCTGTTGTTTTGCTTCTGCAGCCACTCTGTGCTCGCCTACTTATCTGCAAAGCACACTAA Protein sequence MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAKNMANEMKLLKSQLPPHERQTRAARSDKQKPVAVVLLLQPLCARLLICKAH*
Homology
BLAST of CsGy6G026055 vs. NCBI nr
Match: KGN48371.1 (hypothetical protein Csa_002960 [Cucumis sativus]) HSP 1 Score: 175 bits (443), Expect = 5.19e-55 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
Query: 1 MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAKNMANEMKLLKSQLPPHERQTRA 60
MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAKNMANEMKLLKSQLPPHERQTRA
Sbjct: 1 MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAKNMANEMKLLKSQLPPHERQTRA 60
Query: 61 ARSDKQKPVAVVLLLQPLCARLLICKAH 88
ARSDKQKPVAVVLLLQPLCARLLICKAH
Sbjct: 61 ARSDKQKPVAVVLLLQPLCARLLICKAH 88
BLAST of CsGy6G026055 vs. ExPASy TrEMBL
Match: A0A0A0KKU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483510 PE=4 SV=1) HSP 1 Score: 175 bits (443), Expect = 2.52e-55 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
Query: 1 MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAKNMANEMKLLKSQLPPHERQTRA 60
MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAKNMANEMKLLKSQLPPHERQTRA
Sbjct: 1 MGIIKYRNHNPRKQGSKAIPRDHRKATAKFNSVTDPAKNMANEMKLLKSQLPPHERQTRA 60
Query: 61 ARSDKQKPVAVVLLLQPLCARLLICKAH 88
ARSDKQKPVAVVLLLQPLCARLLICKAH
Sbjct: 61 ARSDKQKPVAVVLLLQPLCARLLICKAH 88
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| KGN48371.1 | 5.19e-55 | 100.00 | hypothetical protein Csa_002960 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
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| A0A0A0KKU3 | 2.52e-55 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483510 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..23 |
Relationships
The following mRNA feature(s) are a part of this gene:
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