CsGy6G026015 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G026015
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr6: 25567605 .. 25571652 (-)
RNA-Seq ExpressionCsGy6G026015
SyntenyCsGy6G026015
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTTCCCCATTTTCATACTGGTATTTGAAGTGGGTTTATGGTTTCAGTTGATCTCAAGAAGTTGGAATTTTTGAGGATCATTGAGATCACTCGAATTTGGACAAATATGGGTTCTTAGTTTATAATATGGAAAAAGCGAAGATTATTGTTCATTTCTTTTGTTAATTGCAAGTTTTAGTTATTGAAGTTTCAAGCTTATGTTTAATAATAAGTACACATTTTCTTCTTTTAAAATGCTTCATACTAAACCCTTCGTTTGTTATTGATTTTTTCAATATATGTATTTGATTGTAATAGTTGGTATAGTATTTAATGATTTTTTTCTCTAACTTTCAATATTCGAACTAATAATAAGTTTTAAAAATCTCAATATTATAATTAAAACAAACACAGCTTAACTGAAATACAATGTGTGTTGGCTCGGTGATAATAAACACTCGTTTATGAAATATAAAAAGTGAGTTTAAAATTGAATATTGGAATCCTAACTTGGTAATTTGTTGGCTGGGTTGTCAATTTGTCGTATCCATCATCTTTAGCATATATGGTTGTTGTCGTCACTCTCCATTGATGACGTTCTTGTTGTAGTCACTTAAATGTCTCAAAGTAAAAGTTGTTTTTATAATTGAGTTATGGACCATTCCTTCTAGGCATGAGGAATGTATAATTTCAAATTTGTTTTTAGATGCATAAAATGTACAACATGGTTCATCTCAAATAGTGCGTCTTTTCAATTTAGATGCGTATAAATTTATTATCTAACGAAGTTCATTGATATATAGAGTCACAACATTATTGCTAACAAAAATGTTTGAGAAATGTTTCAAAACTTTGAAAGTGGGATGAAGTGAACAAAAAGAACGTAGATTGACACGTGACAAAAGAAATGGGACACCGTAAAAAGAAAGGAAGAAGACACAATGTTTGAGCATGTTCACTTGATTGGTTCGGGAATGAAAAATTTTTTAATGATAAAGTTGGTATATCACTTACCTTTGAGTATCATGCCACCTATTTATTACTAGACCAACACGTATGTTTTTGTTACTTCCAACTTTTAGATGAAATTTATGTTATTTATGACCCAAATCTTATATTTTGAATGTAAGAACTATTAATATACATGGTATGCCACTTTAGTAAATAAATCAAAAAACATCATTGGAAGTCTTGATACCAATTATACATCTAAAATATATATCTAAACATTGATGAACATATCACTAATGTGTTTGAAAAAATGGCATAATAAAATCAAGACAATTACGAAGTAAAGAAGTTATTTTTACATTTGCAAGTATTAGTTAGTCATTCATTATAAGTTCTATAAAATTTAACATAGATTATGTGTAGAAAAAGGAAAGAAAGAAAAAGGGAAACACAGTTGTTGATTATTAAATTTGGTTTGTAACAAAAAGAAAAGGAAACGACTCCTTGAAATTAAAAACAAAAAAAAAAAAGGAAAAACAGAACTCATTGAAATTCTCAATAATTTAGATGAAAAGATTGAAGAAATATATATAATTATCGCGAAAAGAAAAACTGTGTTCTCTTCTCGCCCCCAAAGTCTTTGAACCCTTTTTCGCCAATTGCTACTTCTTCACTCTTCATCTTCTTCCTTCCACTCACTCTCCAAACATGCCCAAAATATCCGCTTTCAACATTGATTTTGCTTAGTTCGCGCCTATTTTCTCCTTCAATCATATTCTAGGGTTACACCGTTCGCTGTTTTCTGCCGGAAGCTCTCTTCTTTCATGTGAGTTCTATGTTTCCCTCTTCCTTTAATTCTTTTACAGTTTTTGTTGTATGGATGTTTTCGTATCTGGGTCTTGATCTTTTGCTTCTTTTATGTGGGACTGTATGTGGGTCGAGGTTCTTCGACTTCAAAGTTTGGCCCTTTCCGGTTATTACTCCCCATATCCCCATCGCTAAGAACGACGTTTTTTGCTTCTTTGTTTTTTATTTGTTTTTTTTTCTCGAGTGTATTTTTTCTTCTGTGCTCGAGATTCTTTGTGCTTATGGGTATCTTTGGGAATAGATGACTTGGGTATGAATTGGGATTTTCTTTTGGCCATATGGTGAAGTATTTCAAATGACAGGTAGTTTTTTTTTTTTTTTTTTTTTTTGAGAAACGGAGGTGATCTACATAGAACTCTTGTTCAACTGGATTTTAGGTGAAGTTAAGTTCGTATATTGACTGAGTAGTTGGTGAATTGAAGATTACGGTCTGGTGTCCAAAAGGAATGCTATACTATGGAGTTAATAAATCCTCTTTTTTTTTTTTTTAATATTTGATTGTTGAAAGTGGGTTTTCTTTAGAAAGAAAAGTTTCAGAGGACTTCTGATTTTTCCCATGGAATTACTGCACGTGTACTCCATGATTGCTTTCACACCGTCGTGACACCCAATTCAATTTTCTTAGCTTACAAGTTATATATCTTCTAGCATGGTCTTTGCATTCAATCGATTTTTGGAGGAGTATGAGGTAGGAGCTCAGGTTACCCCTCTAGATGCGGCCATGACGTTCTATTAGGGGTCTCAAAATAGTGGACATTGCGCCCCATGTTATTGTTGAAGGCAAGTTTTTTGGTTGTTGCTTTAGAAAGATGGCGGGGGCACACATGACTTTTTTGCCTCGTTTAATCTTTTCTTACAAGTGAAATCCTTGTGTCTGGTTGGGAGCTTGTGCAAGGATTTATCCAAATGATTGTAACCGAAAGAAAACTTCTCTAAGCACATCTTGTTGGTGCTTGCCTCATAAAAGAAAAAGGTGAGTTGTGTGCAGATTGGTAGTCTTTGGAGGAATCTTGGTGTTGGCATATATGGAGTAGCTCGTGCCTTGTTTATTTTATAGTTGTCGTTGGAATATGATTTATAAGTGATGTCATTGGAATATAGAATCTGGAGGATTTTGAAGACTAAGGTTTGAATGTTAAGATTTTATGTAGTAGTACTGATTATCTGGTTCTGGTAACGAAAAGATCTTGCACAAGTGGTTGGAATTTCAAGGTAGGTATCAACCTATTTGAATCTTGATCACATTCTTTGGAGCTCAAATTTTCTTTGGCTTTTTGAAGTCTATTATTTTGATGTATTTGACTTTCCGTTTGCTAGACAAAGAGGGTCTAAGGTGATGATTGAGTAGTTTCTTCTCCATTCGGATTTTTGGTAGAATAGATGGTTCTTGTTCCAAGTGGGGTTTTGTGTTGTGTTCTGAGGCGAGAGGAATAATAAGACCTTTAGCCGTTGAGAATGACTGTAGCAATGTTTCTTCTCTCACTAGATTCTATATTTTTCTTTGGGTGTTAGTGACAGTGTTTGTTAATTGTTTTTTTTGGGTCTTATTTGAATTGGTTGGAGGCCTAGTGGGGCTTGATTTTTTGGATGTTCTTATAGTCTTTCATTTTTTTTTCCTTAATGGAAGTTTTTTTCTTTCTGAAAAGGAAACATAACTTTTCGTTGAAAAAATGAAAAGGGAAGAATGTCAAAAAATACAATAACTATTAAGAGAAGAAAAATAAAATAATACAATCCTTTTAAGATACAACGAGGAAAAGACACCAAAAAGCAAACACTTAAAACCTAACAAACTAACTCAATGAAAGTTCAATTCCAGTTCATTAAATATTGGGTTTCAGGTCTTAGTAGTTAAAGCATTTGTAATTTGACTGATTTTTTGTTTGTGAGTAGTAAGTTAGATTATTATTGTCATTTATATTTCTTATTAAAGCTTTAGGCTGAATCTTAAATAATTTAGTTACTGGATGTATATTTATTAATTTACCCCTTGCTGAAGTCTTAGGTTCTTTTTCCTGCCAAAGTTAATTGATTAGACCCCAACTTATTAGGTTCCTTGATAGATACCCTCTTCTTTAGTTAATGTATCACGTAGAGTGTGCTAATGTCAACATATAATTTTCTGCAGTATCTTCACGTGGTCGGTTGATGGAAAGATTAGCAAGGGTGTTCAATAATAACTTATGGCAATGGCTTTCTGTTCCACTACAAGAGCAATTGGGCATAAGCAAAAATTCATGGAACTAA

mRNA sequence

ATGTTTTTCCCCATTTTCATACTGTTCGCGCCTATTTTCTCCTTCAATCATATTCTAGGGTTACACCGTTCGCTGTTTTCTGCCGGAAGCTCTCTTCTTTCATTATCTTCACGTGGTCGGTTGATGGAAAGATTAGCAAGGGTGTTCAATAATAACTTATGGCAATGGCTTTCTGTTCCACTACAAGAGCAATTGGGCATAAGCAAAAATTCATGGAACTAA

Coding sequence (CDS)

ATGTTTTTCCCCATTTTCATACTGTTCGCGCCTATTTTCTCCTTCAATCATATTCTAGGGTTACACCGTTCGCTGTTTTCTGCCGGAAGCTCTCTTCTTTCATTATCTTCACGTGGTCGGTTGATGGAAAGATTAGCAAGGGTGTTCAATAATAACTTATGGCAATGGCTTTCTGTTCCACTACAAGAGCAATTGGGCATAAGCAAAAATTCATGGAACTAA

Protein sequence

MFFPIFILFAPIFSFNHILGLHRSLFSAGSSLLSLSSRGRLMERLARVFNNNLWQWLSVPLQEQLGISKNSWN*
Homology
[Close]
BLAST of CsGy6G026015 vs. NCBI nr
Match: KGN48366.1 (hypothetical protein Csa_003278 [Cucumis sativus])

HSP 1 Score: 143 bits (361), Expect = 5.83e-43
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MFFPIFILFAPIFSFNHILGLHRSLFSAGSSLLSLSSRGRLMERLARVFNNNLWQWLSVP 60
          MFFPIFILFAPIFSFNHILGLHRSLFSAGSSLLSLSSRGRLMERLARVFNNNLWQWLSVP
Sbjct: 1  MFFPIFILFAPIFSFNHILGLHRSLFSAGSSLLSLSSRGRLMERLARVFNNNLWQWLSVP 60

Query: 61 LQEQLGISKNSWN 73
          LQEQLGISKNSWN
Sbjct: 61 LQEQLGISKNSWN 73

[Close]
BLAST of CsGy6G026015 vs. NCBI nr
Match: KAG7035121.1 (hypothetical protein SDJN02_01916, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 76.6 bits (187), Expect = 2.99e-16
Identity = 35/39 (89.74%), Postives = 37/39 (94.87%), Query Frame = 0 

Query: 34 SLSSRGRLMERLARVFNNNLWQWLSVPLQEQLGISKNSW 72
          ++SSRGRLMERLA VFNNNLWQWLSVPLQEQLGIS NSW
Sbjct: 49 AVSSRGRLMERLAMVFNNNLWQWLSVPLQEQLGISTNSW 87

[Close]
BLAST of CsGy6G026015 vs. ExPASy TrEMBL
Match: A0A0A0KKT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483465 PE=4 SV=1)

HSP 1 Score: 143 bits (361), Expect = 2.82e-43
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MFFPIFILFAPIFSFNHILGLHRSLFSAGSSLLSLSSRGRLMERLARVFNNNLWQWLSVP 60
          MFFPIFILFAPIFSFNHILGLHRSLFSAGSSLLSLSSRGRLMERLARVFNNNLWQWLSVP
Sbjct: 1  MFFPIFILFAPIFSFNHILGLHRSLFSAGSSLLSLSSRGRLMERLARVFNNNLWQWLSVP 60

Query: 61 LQEQLGISKNSWN 73
          LQEQLGISKNSWN
Sbjct: 61 LQEQLGISKNSWN 73

The following BLAST results are available for this feature:
BLAST of CsGy6G026015 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G026015 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48366.15.83e-43100.00hypothetical protein Csa_003278 [Cucumis sativus][more]
KAG7035121.12.99e-1689.74hypothetical protein SDJN02_01916, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CsGy6G026015 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKT82.82e-43100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483465 PE=4 SV=1[more]
BLAST of CsGy6G026015 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G026015.1CsGy6G026015.1mRNA