CsGy6G024060 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G024060
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Transcription initiation factor TFIID subunit 8
Location	Gy14Chr6: 24015692 .. 24019643 (-)
RNA-Seq Expression	CsGy6G024060
Synteny	CsGy6G024060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGTTTTTTCAAGCCTTATTTTTTGGGGGGTTTTATTTTTTCCAATTTTTTCCTTCCAAAATTTCCCTTCCTCTTCGATCTCAAGGGTCTTACCGAGGTTTATCCATTTTTCATCATCAATTTTCTTTTCCCAATTTGTGTTTGAATTCTTGGATTCCCTCCATGGCCTTCACCTTTCTGTAAACCCTAACAATCTTCTTCTTAGGGTTTCAATCTCGTTTGTTCATCCTGGTGTCTCCTCACCTTTGAATTCTCCGTGTTTTATTGTAGATTTCATTTCACTTTTTGGAAATCTTGTGGAAGTATATGCATTTCCTGGACAATTTTGAAGCTTCTTGAGGCTTACAGGGTTCTGTTTGGAGTTAATTTTGTTCAAGATTTCCGACCCACCTGTTTCCTTCGGTCCCTGGACGAGAAAACGAGGGAGAAGTTCTGCAATTACGCGTCTCAGGCATGCTGTTTCAATTTCTTATGACTAGGCTAGAATGAGCGTTTTGTTCTTTAGCAAAGTTGAGGTTTGATTGTGGAAGATGGTTGGTTTTGGCGGTTATTAATGGGGTGAATCTCGCAGTCCCAGTTAAACCTAAATGACACGAGGATTTGAATATGAGCCATGGAGGTGGGAACATTACGAGAGAGAATGAAAATCAGGTGGATCGTTTTAGGAGAGGTGGAGGTGATGATTTCGGGCGAGAGGTGTCGAAGATTGCAGCAGCACAGATATGCCAGAGTCTGGGATTTCAGGGATCGAAGGAGTCTGCCATGGACACACTTGCGGAAATTGTAATAGTGTACCTTAGTGATTTGGGTAAGATGGCGAGTTTCTATTCTAACTTAGCTGGTAGAACCGAGTGTAATGTGTTTGACATTGTTAGAGGATTTAAAGATTTAGAAGCACCAGGGTCGTCTCATCAAGACGCTGAGGTTAGCCGTTGTCTTGCAGGTTCACGTACAATTCAAGAAATTTTTGAGTATGTGAATTCAGTGCAAGAAATTCCATTTGCTCAGCCGGTACCACGGTTTCCTATTATCAAGAGCTGCAAGGTACTGCCGAGTTTCATTCAAATGAGGGAAACACCTCCTAGCAAGCATATACCCAATTGGCTACCTGCTTTTCCTGATCCCCACACTTACATTTATACGCCGGTGTGGAATAAGAGGACGACAGACCCTCGCACTGACAAGATTGAGCAAGCAAGGCAGAGGAGAAAGGCAGAGAAGTCATTGTTAAGTCTGCAGCAGAGATTAGTAGTTAATACTGGCAATCTAGAGGAAGAATTACCTAGTTTTGATAGTAACACACCCCATGATATAGAGTTGCAACCGAGGGAAAATGTTGTTTCTGTGGTCAAATCCTCTCTTAAACATTCAGATAATGATTTTGATGATAGCAGTCATGTGTTAGAGGCATTTGCTCCGGCCATAGAAGCGGTTAAAGGAAGTGGTTTTTATGACGATGAAGAGGGTGTGAAGAAGGCTCTTCCCATTGTTAGGCCTGTCGTTCAATTTAAGTTCAAAACTGGGAAGAAGCTTCTTGGTGATTCTTTGGATTTGAACATTCAAAAGAAGGGAATGGGTAGAACAGTGTACTTGGTTGGTCGGGATGATGAAAGGGATGATAAGAAACGGAGAGCTGAATACATTCTTAGACAGTCTGTGGAGAATCCGCAAGAACTCAATCAGTTGTGAATAAATATATTGACTGGCGTTCATAATTTAATCTAGGTATTTGGTATTAGCTGGTGCAATTGTTGCTTTAGTTTACAACATATCTTCCTTGTAGTACGGCCATTCTTGTATTTTACATTGAGTTTCTTGTATTTCCACTCAGGAATTTTTCAGAGATGCAAATGCTTGTGAAAAATTTATTGAGAAGGTTTCACGTCTCTTTTCAACTCTCTCATGGTGTGTTTGAACTGTTTGTTCTGTTGTTAAGTTGTGATATTGAATCTTCTTTTGCTCTCTTATTTGTGAACTTCGCTATGGGAGTATCAAGTTCTAATTGCAGATGTAAGAGGTATTTCTCCTTGCTCTGCTAATTAAGACTGCCGTCTGGGTCCAGCAATACTTCTGTTTTGTTTGTTTTTCAACAATTTAGACATTTGTACTGCCACTTTTTTTGATTACTCAAATAGGGTCGTCATACTGCTGACAAGAAACGAAGTCCACAACACCATTTTATGCAAATGGATAAATTGGCTTTATTTTTTTATTTGTGCTTTATGAACTAAATTTGCTCAGGATATGTAGATGATCACTCCTTTTGCTGGCTCTGGCTTGCGGATCAAACCAGGTGTGTTTCAATCTCTCTTTGAGCTAAACTTCATTGTTCCTTTGATTTGTAGGATCTGATGTGATTCTGTTGGTCAGAATATGGACAATGATCTGATGAACATGTTGTAAATAGTTTTTCTACAATGGTAAATGATAACGTGAAACAATAATGAACTCTTATAGTAGTGGTTACTACCTATGCGACCATAATCACCTTTATATCTGAGACTAAAACTTTTGGTTGATGCTTAGAATGCTTTTTTAGTGAAACCCAAATTCCTTCTTTGCACTTGCAACATGAAATAGGTGAAGAAAGGAAAATGGTCTGGTCAAGTCAATCTTAAGGAAATAAAATATCCACTGGGTTTGTTTTTTCAAGGTAAGTACTGGCAAGTTTCCATTCTTCACAAATTCTGAATTGGCCATATCTTCTTGTCTGTCTGACTTCCTGCTTGAAGTTAAAGATCAAATTCTTTCTTAATTTCTTCATGGTAAAGATATGATAAGAAAATATTCTATTTCTTTATTTTACGATGTTTTTGAATGGTTTGGTTCGTCTTTAAGAGTAAAACGTTAAACTGCAGGGGCTGAAAGTAAACAAACTACGTTAGACCTGCATTGTGAAAGAAAGATGATGTAATGAATGTACTTTATAAATGCATGGGGAATAGATCGAAACTAAATCTTTACCACATTTGTTCAGAAAAAAGGGCCAAAATGAGCTTTGGCTGTCGAAGCATCTGTTGTATTTCCTTTGCCAGACTCTCTTTTGTAGCTTTTGATACTTCATTTTTATTCTTATCAAAATAATACATATATAGTCACGAGACCATCATTATAATTGTTGTCTGTAAGTTTATCATTGATCATCTCATGTTGTCTGGAAATGGATTATTGATTGAATAATTGTATATTGGTTGAGTAAAGCATTTGATACACACAAATTTCAAAATGTCCTTATGAAAGCAAGAAATATGTTTTGCACATATATTTTTTGTTTTATTTTAATTGTTCACAGCTCTTACAATTGACATTTCTCTTCCTACATGTGGCTATGGTTTGTTATCTAGATCCTTTATCCTGCTGGAATGTATTTGTATATTCTGTAGGGCAAACACACTTCTAGACAACGTGAAGCAAAAATGAGCTCTTATAAAACGTTTCTCAACCTTGGACCAACACAACAATACACACAGCCATTGTGGTCAAGCTTGTCGATCCCTACTGAATGATGCCACGATGCCGAGATGCCAAGCCGAATGCTGGAAGTAAAGTTTGGCCTTGGTGTGCAAACCCAGGTGCCAGATTTGTTCAGGTTTCAAGTAGGCAATCTTCTGATTCTGTATCCTTTATGATATCTGGTTGATGACTTTGAGCTAATTTTAGTTTTCGAGCTTGCCTGCTGATCATAGTTACTGATCTGATCTTGTCTGGCGATCATAGTTATTGATTTTTGTCTTAAAAATCAATGAGAAATGTTAAATGTACATTGATATGTCTATGGCTTGTATGTGCATGCCTGTTGATGACAATTGAACACGTTTCTTCAAAAGAGTTACGGACCTTTGTAAGTTTCAGTTAAAAGTGGCGTATTTAGGACTTTTGTTCATAGAAATGGAAGATTGTGATTGGAAAATATTTATGGTTAGATAACTATAAAAATCAAGCTTATATACA

mRNA sequence

CTCGTTTTTTCAAGCCTTATTTTTTGGGGGGTTTTATTTTTTCCAATTTTTTCCTTCCAAAATTTCCCTTCCTCTTCGATCTCAAGGGTCTTACCGAGGTTTATCCATTTTTCATCATCAATTTTCTTTTCCCAATTTGTGTTTGAATTCTTGGATTCCCTCCATGGCCTTCACCTTTCTGTAAACCCTAACAATCTTCTTCTTAGGGTTTCAATCTCGTTTGTTCATCCTGGTGTCTCCTCACCTTTGAATTCTCCGTGTTTTATTGTAGATTTCATTTCACTTTTTGGAAATCTTGTGGAAGTATATGCATTTCCTGGACAATTTTGAAGCTTCTTGAGGCTTACAGGGTTCTGTTTGGAGTTAATTTTGTTCAAGATTTCCGACCCACCTGTTTCCTTCGGTCCCTGGACGAGAAAACGAGGGAGAAGTTCTGCAATTACGCGTCTCAGGCATGCTGTTTCAATTTCTTATGACTAGGCTAGAATGAGCGTTTTGTTCTTTAGCAAAGTTGAGGTTTGATTGTGGAAGATGGTTGGTTTTGGCGGTTATTAATGGGGTGAATCTCGCAGTCCCAGTTAAACCTAAATGACACGAGGATTTGAATATGAGCCATGGAGGTGGGAACATTACGAGAGAGAATGAAAATCAGGTGGATCGTTTTAGGAGAGGTGGAGGTGATGATTTCGGGCGAGAGGTGTCGAAGATTGCAGCAGCACAGATATGCCAGAGTCTGGGATTTCAGGGATCGAAGGAGTCTGCCATGGACACACTTGCGGAAATTGTAATAGTGTACCTTAGTGATTTGGGTTCACGTACAATTCAAGAAATTTTTGAGTATGTGAATTCAGTGCAAGAAATTCCATTTGCTCAGCCGGTACCACGGTTTCCTATTATCAAGAGCTGCAAGGTACTGCCGAGTTTCATTCAAATGAGGGAAACACCTCCTAGCAAGCATATACCCAATTGGCTACCTGCTTTTCCTGATCCCCACACTTACATTTATACGCCGGTGTGGAATAAGAGGACGACAGACCCTCGCACTGACAAGATTGAGCAAGCAAGGCAGAGGAGAAAGGCAGAGAAGTCATTGTTAAGTCTGCAGCAGAGATTAGTAGTTAATACTGGCAATCTAGAGGAAGAATTACCTAGTTTTGATAGTAACACACCCCATGATATAGAGTTGCAACCGAGGGAAAATGTTGTTTCTGTGGTCAAATCCTCTCTTAAACATTCAGATAATGATTTTGATGATAGCAGTCATGTGTTAGAGGCATTTGCTCCGGCCATAGAAGCGGTTAAAGGAAGTGGTTTTTATGACGATGAAGAGGGTGTGAAGAAGGCTCTTCCCATTGTTAGGCCTGTCGTTCAATTTAAGTTCAAAACTGGGAAGAAGCTTCTTGGTGATTCTTTGGATTTGAACATTCAAAAGAAGGGAATGGGTAGAACAGTGTACTTGGTTGGTCGGGATGATGAAAGGGATGATAAGAAACGGAGAGCTGAATACATTCTTAGACAGTCTGTGGAGAATCCGCAAGAACTCAATCAGTTGTGAATAAATATATTGACTGGCGTTCATAATTTAATCTAGGTATTTGGTATTAGCTGGTGCAATTGTTGCTTTAGTTTACAACATATCTTCCTTGTAGTACGGCCATTCTTGTATTTTACATTGAGTTTCTTGTATTTCCACTCAGGAATTTTTCAGAGATGCAAATGCTTGTGAAAAATTTATTGAGAAGGTTTCACGTCTCTTTTCAACTCTCTCATGGTGTGTTTGAACTGTTTGTTCTGTTGTTAAGTTGTGATATTGAATCTTCTTTTGCTCTCTTATTTGTGAACTTCGCTATGGGAGTATCAAGTTCTAATTGCAGATGTAAGAGGTATTTCTCCTTGCTCTGCTAATTAAGACTGCCGTCTGGGTCCAGCAATACTTCTGTTTTGTTTGTTTTTCAACAATTTAGACATTTGTACTGCCACTTTTTTTGATTACTCAAATAGGGTCGTCATACTGCTGACAAGAAACGAAGTCCACAACACCATTTTATGCAAATGGATAAATTGGCTTTATTTTTTTATTTGTGCTTTATGAACTAAATTTGCTCAGGATATGTAGATGATCACTCCTTTTGCTGGCTCTGGCTTGCGGATCAAACCAGGTGTGTTTCAATCTCTCTTTGAGCTAAACTTCATTGTTCCTTTGATTTGTAGGATCTGATGTGATTCTGTTGGTCAGAATATGGACAATGATCTGATGAACATGTTGTAAATAGTTTTTCTACAATGGTAAATGATAACGTGAAACAATAATGAACTCTTATAGTAGTGGTTACTACCTATGCGACCATAATCACCTTTATATCTGAGACTAAAACTTTTGGTTGATGCTTAGAATGCTTTTTTAGTGAAACCCAAATTCCTTCTTTGCACTTGCAACATGAAATAGGTGAAGAAAGGAAAATGGTCTGGTCAAGTCAATCTTAAGGAAATAAAATATCCACTGGGTTTGTTTTTTCAAGGGCAAACACACTTCTAGACAACGTGAAGCAAAAATGAGCTCTTATAAAACGTTTCTCAACCTTGGACCAACACAACAATACACACAGCCATTGTGGTCAAGCTTGTCGATCCCTACTGAATGATGCCACGATGCCGAGATGCCAAGCCGAATGCTGGAAGTAAAGTTTGGCCTTGGTGTGCAAACCCAGGTGCCAGATTTGTTCAGGTTTCAAGTAGGCAATCTTCTGATTCTGTATCCTTTATGATATCTGGTTGATGACTTTGAGCTAATTTTAGTTTTCGAGCTTGCCTGCTGATCATAGTTACTGATCTGATCTTGTCTGGCGATCATAGTTATTGATTTTTGTCTTAAAAATCAATGAGAAATGTTAAATGTACATTGATATGTCTATGGCTTGTATGTGCATGCCTGTTGATGACAATTGAACACGTTTCTTCAAAAGAGTTACGGACCTTTGTAAGTTTCAGTTAAAAGTGGCGTATTTAGGACTTTTGTTCATAGAAATGGAAGATTGTGATTGGAAAATATTTATGGTTAGATAACTATAAAAATCAAGCTTATATACA

Coding sequence (CDS)

ATGAGCCATGGAGGTGGGAACATTACGAGAGAGAATGAAAATCAGGTGGATCGTTTTAGGAGAGGTGGAGGTGATGATTTCGGGCGAGAGGTGTCGAAGATTGCAGCAGCACAGATATGCCAGAGTCTGGGATTTCAGGGATCGAAGGAGTCTGCCATGGACACACTTGCGGAAATTGTAATAGTGTACCTTAGTGATTTGGGTTCACGTACAATTCAAGAAATTTTTGAGTATGTGAATTCAGTGCAAGAAATTCCATTTGCTCAGCCGGTACCACGGTTTCCTATTATCAAGAGCTGCAAGGTACTGCCGAGTTTCATTCAAATGAGGGAAACACCTCCTAGCAAGCATATACCCAATTGGCTACCTGCTTTTCCTGATCCCCACACTTACATTTATACGCCGGTGTGGAATAAGAGGACGACAGACCCTCGCACTGACAAGATTGAGCAAGCAAGGCAGAGGAGAAAGGCAGAGAAGTCATTGTTAAGTCTGCAGCAGAGATTAGTAGTTAATACTGGCAATCTAGAGGAAGAATTACCTAGTTTTGATAGTAACACACCCCATGATATAGAGTTGCAACCGAGGGAAAATGTTGTTTCTGTGGTCAAATCCTCTCTTAAACATTCAGATAATGATTTTGATGATAGCAGTCATGTGTTAGAGGCATTTGCTCCGGCCATAGAAGCGGTTAAAGGAAGTGGTTTTTATGACGATGAAGAGGGTGTGAAGAAGGCTCTTCCCATTGTTAGGCCTGTCGTTCAATTTAAGTTCAAAACTGGGAAGAAGCTTCTTGGTGATTCTTTGGATTTGAACATTCAAAAGAAGGGAATGGGTAGAACAGTGTACTTGGTTGGTCGGGATGATGAAAGGGATGATAAGAAACGGAGAGCTGAATACATTCTTAGACAGTCTGTGGAGAATCCGCAAGAACTCAATCAGTTGTGA

Protein sequence

MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIVIVYLSDLGSRTIQEIFEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPVWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEELPSFDSNTPHDIELQPRENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDEEGVKKALPIVRPVVQFKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL*

Homology

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BLAST of CsGy6G024060 vs. ExPASy Swiss-Prot
Match: Q9SYZ9 (Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 GN=TAF8 PE=1 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 8.9e-56
Identity = 135/338 (39.94%), Postives = 194/338 (57.40%), Query Frame = 0


Query: 26  DFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIVIVYLSDLG----------------- 85
           +F    +K A AQ+C+S+G++  K+ A+++L+   + Y+  LG                 
Sbjct: 25  EFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQYILQLGKTATSFANLTGRSQCNV 84

Query: 86  ----------------------------SRTIQEIFEYVNSVQEIPFAQPVPRFPII--- 145
                                       S  ++EI ++VNS +E+PF+QP+P FP+    
Sbjct: 85  FDIILALDDLTDNNGEQGISSESCSLGRSIKLREIIDFVNSSEEVPFSQPLPSFPVAISD 144

Query: 146 KSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPVWNKRTTDPRTDKIEQARQRRK 205
           +S K++PSF+++ ETPP KHIP WLPAFPDPHTY  TP+W +R +DPR DKIEQARQRRK
Sbjct: 145 RSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKETPMWIERVSDPRGDKIEQARQRRK 204

Query: 206 AEKSLLSLQQRLVVNTGNLEEELPSFDSNTPHDIELQPRENVVSVVKSSLKHSDNDFDDS 265
           AE++LLSLQ++LV     +    P +        E++  E+ +  V S  K    + D  
Sbjct: 205 AERALLSLQRKLVC---KISSRNPVWGDMDGVKEEMRDDESELRSVSSGEKVESLNRDGL 264

Query: 266 SHVLEAFAPAIEAVKGSGFYDDEEGVKKALPIVRPVVQFKFKTGKKLLGDSLDLNIQKKG 316
           S V+EAFAPA+EA +  GF  +     K     +PV   K +T KK LG  LDL++Q KG
Sbjct: 265 S-VIEAFAPAMEAAR-DGFSSEAHTEWKK---NKPVALSKLRTEKKFLGQPLDLSLQMKG 324

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BLAST of CsGy6G024060 vs. ExPASy Swiss-Prot
Match: Q9EQH4 (Transcription initiation factor TFIID subunit 8 OS=Mus musculus OX=10090 GN=Taf8 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.5e-10
Identity = 69/283 (24.38%), Postives = 125/283 (44.17%), Query Frame = 0


Query: 29  REVSKIAAAQICQSLGFQGSKESAMDTLAEIVIVYLSDLG----------SRTIQEIFEY 88
           R   ++  + +    GF+ +++++++TL E++  Y+S++G          +RT   + + 
Sbjct: 32  RRTLQVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDI 91

Query: 89  VNSVQEIPF-AQPVPRF-----------PIIKSCKVLPSFI---QMRETPPSKHIPNWLP 148
           V ++ E+ F    +P +           P + +  V P  +   Q R  PP  HIP+  P
Sbjct: 92  VVTLVEMGFNVDTLPAYAKRSQRMVITAPPVTNQPVTPKALTAGQNRPHPP--HIPSHFP 151

Query: 149 AFPDPHTYIYTPVWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEE----- 208
            FPDPHTYI TP + +  +D +  + + A QRR  E++L     R +  TG  +      
Sbjct: 152 EFPDPHTYIKTPTYREPVSDYQILREKAASQRRDVERAL----TRFMAKTGETQSLFKDD 211

Query: 209 ------------ELPSFDSNTPHDIELQPRENVVSVVKSSLKHSDND-----FDDSSHVL 265
                        +P   +  P ++E+Q  E   S  +     ++N+      DDS    
Sbjct: 212 VSTFPLIAARPFTIPYLTALLPSELEIQQMEETDSSEQEEQTDTENNALHISTDDSGAEK 271

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BLAST of CsGy6G024060 vs. ExPASy Swiss-Prot
Match: A7MAZ4 (Transcription initiation factor TFIID subunit 8 OS=Bos taurus OX=9913 GN=TAF8 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.6e-09
Identity = 68/283 (24.03%), Postives = 122/283 (43.11%), Query Frame = 0


Query: 29  REVSKIAAAQICQSLGFQGSKESAMDTLAEIVIVYLSDLG----------SRTIQEIFEY 88
           R   ++  + +    GF+ +++++++TL E++  Y+S++G          +RT   + + 
Sbjct: 34  RRTLQVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDI 93

Query: 89  VNSVQEIPF-AQPVPRF-----------PIIKSCKVLPSFI---QMRETPPSKHIPNWLP 148
           V ++ E+ F    +P +           P + +  V P  +   Q R  PP  HIP+  P
Sbjct: 94  VVTLVEMGFNVDTLPAYAKRSQRMVITAPPVTNQPVTPKALTAGQNRPHPP--HIPSHFP 153

Query: 149 AFPDPHTYIYTPVWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEE----- 208
            FPDPHTYI TP + +  +D +  + + A QRR  E++L     R +  TG  +      
Sbjct: 154 EFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERAL----TRFMAKTGETQSLFKDD 213

Query: 209 ------------ELPSFDSNTPHDIELQPRENVVSVVKSSLKHSDN-----DFDDSSHVL 265
                        +P   +  P ++E+Q  E   S  +     ++N       DDS    
Sbjct: 214 VSTFPLIAARPFTIPYLTALLPSELEMQQMEETDSSEQDEQTDTENLPLHISPDDSGAEK 273

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BLAST of CsGy6G024060 vs. ExPASy Swiss-Prot
Match: Q7Z7C8 (Transcription initiation factor TFIID subunit 8 OS=Homo sapiens OX=9606 GN=TAF8 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.6e-09
Identity = 67/283 (23.67%), Postives = 122/283 (43.11%), Query Frame = 0


Query: 29  REVSKIAAAQICQSLGFQGSKESAMDTLAEIVIVYLSDLG----------SRTIQEIFEY 88
           R   ++  + +    GF+ +++++++TL E++  Y+S++G          +RT   + + 
Sbjct: 34  RRTLQVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDI 93

Query: 89  VNSVQEIPF-AQPVPRF-----------PIIKSCKVLPSFI---QMRETPPSKHIPNWLP 148
           V ++ E+ F    +P +           P + +  V P  +   Q R  PP  HIP+  P
Sbjct: 94  VVTLVEMGFNVDTLPAYAKRSQRMVITAPPVTNQPVTPKALTAGQNRPHPP--HIPSHFP 153

Query: 149 AFPDPHTYIYTPVWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEE----- 208
            FPDPHTYI TP + +  +D +  + + A QRR  E++L     R +  TG  +      
Sbjct: 154 EFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERAL----TRFMAKTGETQSLFKDD 213

Query: 209 ------------ELPSFDSNTPHDIELQPRENVVSVVKSSLKHSDN-----DFDDSSHVL 265
                        +P   +  P ++E+Q  E   S  +     ++N       +DS    
Sbjct: 214 VSTFPLIAARPFTIPYLTALLPSELEMQQMEETDSSEQDEQTDTENLALHISMEDSGAEK 273

[Close]

BLAST of CsGy6G024060 vs. ExPASy Swiss-Prot
Match: Q7ZYA2 (Transcription initiation factor TFIID subunit 8 OS=Xenopus laevis OX=8355 GN=taf8 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.4e-08
Identity = 65/278 (23.38%), Postives = 120/278 (43.17%), Query Frame = 0


Query: 29  REVSKIAAAQICQSLGFQGSKESAMDTLAEIVIVYLSDLG----------SRTIQEIFEY 88
           R   ++  + +    GF  ++++A+++L E++  YLS++G          +RT   + + 
Sbjct: 24  RRTLQVVVSSLLTEAGFDSAEKAAVESLTEMLQSYLSEIGRSAKSYCEHTARTQPTLPDI 83

Query: 89  VNSVQEIPF-AQPVPRF-----------PIIKSCKVLPSFIQMRETPP-SKHIPNWLPAF 148
           V ++ E+ F    +P +           P + +  V+P  +   +  P   HIP+  P F
Sbjct: 84  VVTLIEMGFNVDSLPAYAKRSQRMVITAPPVTNNPVVPKALSAGDNKPHPAHIPSHFPEF 143

Query: 149 PDPHTYIYTPVWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEE------- 208
           PDPHTYI TP + +   D +  + + A QRR  E++L     R +  TG  +        
Sbjct: 144 PDPHTYIKTPTYREPVCDYQVLREKAASQRRDVERAL----TRFMAKTGETQSLFKDDTS 203

Query: 209 ----------ELPSFDSNTPHDIELQPRENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAI 263
                      +P  ++  P ++ELQ     V    SS +    D ++ S  L+     +
Sbjct: 204 TFPLIAARPLSIPYLNALLPSELELQQ----VDETDSSEQDDQTDTENLSLHLQGDEVGM 263

[Close]

BLAST of CsGy6G024060 vs. NCBI nr
Match: XP_031743417.1 (transcription initiation factor TFIID subunit 8 isoform X2 [Cucumis sativus] >KAE8647405.1 hypothetical protein Csa_003070 [Cucumis sativus])

HSP 1 Score: 619 bits (1596), Expect = 2.45e-223
Identity = 314/315 (99.68%), Postives = 315/315 (100.00%), Query Frame = 0


Query: 1   MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
           MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV
Sbjct: 1   MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60

Query: 61  IVYLSDLGSRTIQEIFEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPN 120
           IVYLSDLGSRTIQEIFEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPN
Sbjct: 61  IVYLSDLGSRTIQEIFEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPN 120

Query: 121 WLPAFPDPHTYIYTPVWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEEL 180
           WLPAFPDPHTYIYTPVWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEEL
Sbjct: 121 WLPAFPDPHTYIYTPVWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEEL 180

Query: 181 PSFDSNTPHDIELQPRENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDE 240
           PSFDSNTPHDIELQPRENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDE
Sbjct: 181 PSFDSNTPHDIELQPRENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDE 240

Query: 241 EGVKKALPIVRPVVQFKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEY 300
           EGVKKALPIVRP+VQFKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEY
Sbjct: 241 EGVKKALPIVRPLVQFKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEY 300

Query: 301 ILRQSVENPQELNQL 315
           ILRQSVENPQELNQL
Sbjct: 301 ILRQSVENPQELNQL 315

[Close]

BLAST of CsGy6G024060 vs. NCBI nr
Match: XP_011657663.1 (transcription initiation factor TFIID subunit 8 isoform X1 [Cucumis sativus])

HSP 1 Score: 597 bits (1540), Expect = 4.46e-214
Identity = 314/360 (87.22%), Postives = 315/360 (87.50%), Query Frame = 0


Query: 1   MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
           MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV
Sbjct: 1   MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60

Query: 61  IVYLSDLG---------------------------------------------SRTIQEI 120
           IVYLSDLG                                             SRTIQEI
Sbjct: 61  IVYLSDLGKMASFYSNLAGRTECNVFDIVRGFKDLEAPGSSHQDAEVSRCLAGSRTIQEI 120

Query: 121 FEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTP 180
           FEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTP
Sbjct: 121 FEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTP 180

Query: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEELPSFDSNTPHDIELQP 240
           VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEELPSFDSNTPHDIELQP
Sbjct: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEELPSFDSNTPHDIELQP 240

Query: 241 RENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDEEGVKKALPIVRPVVQ 300
           RENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDEEGVKKALPIVRP+VQ
Sbjct: 241 RENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDEEGVKKALPIVRPLVQ 300

Query: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 315
           FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360

[Close]

BLAST of CsGy6G024060 vs. NCBI nr
Match: KAA0063816.1 (transcription initiation factor TFIID subunit 8-like [Cucumis melo var. makuwa] >TYK07308.1 transcription initiation factor TFIID subunit 8-like [Cucumis melo var. makuwa])

HSP 1 Score: 582 bits (1500), Expect = 5.54e-208
Identity = 305/360 (84.72%), Postives = 311/360 (86.39%), Query Frame = 0


Query: 1   MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
           MSHGGGNITRENENQVDRFRRGGGDDFGR+VSKIAAAQICQSLGFQGSKESAMDTLAEIV
Sbjct: 1   MSHGGGNITRENENQVDRFRRGGGDDFGRQVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60

Query: 61  IVYLSDLG---------------------------------------------SRTIQEI 120
           +VYLSDLG                                             SRTIQEI
Sbjct: 61  VVYLSDLGKMASFYSNLAGRTECNVFDIVRGFKDLEAPGSSHQDAEVSRCLAGSRTIQEI 120

Query: 121 FEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTP 180
           FEYVNSVQEIPFAQPVP+FPIIKSCKVLPSFIQM+ETPPSKHIPNWLPAFPDPHTYIYTP
Sbjct: 121 FEYVNSVQEIPFAQPVPQFPIIKSCKVLPSFIQMKETPPSKHIPNWLPAFPDPHTYIYTP 180

Query: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEELPSFDSNTPHDIELQP 240
           VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRL+VNTGNLEEELPSFDSNT HDIELQP
Sbjct: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLIVNTGNLEEELPSFDSNTSHDIELQP 240

Query: 241 RENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDEEGVKKALPIVRPVVQ 300
           RENVVS VKSSLKHSDN FD+SSHVLEAFAPAIEAVKGSGFYDDEEG KKALPIVRPVVQ
Sbjct: 241 RENVVSAVKSSLKHSDNVFDESSHVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPVVQ 300

Query: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 315
           FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360

[Close]

BLAST of CsGy6G024060 vs. NCBI nr
Match: XP_008462468.1 (PREDICTED: transcription initiation factor TFIID subunit 8-like [Cucumis melo])

HSP 1 Score: 581 bits (1497), Expect = 1.59e-207
Identity = 305/360 (84.72%), Postives = 310/360 (86.11%), Query Frame = 0


Query: 1   MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
           MSHGGGNITRENENQVDRFRRGGGDDFGR+VSKIAAAQICQSLGFQGSKESAMDTLAEIV
Sbjct: 1   MSHGGGNITRENENQVDRFRRGGGDDFGRQVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60

Query: 61  IVYLSDLG---------------------------------------------SRTIQEI 120
           +VYLSDLG                                             SRTIQEI
Sbjct: 61  VVYLSDLGKMASFYSNLAGRTECNVFDIVRGFKDLEAPGSSHQDAEVSRCLAGSRTIQEI 120

Query: 121 FEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTP 180
           FEYVNSVQEIPFAQPVP FPIIKSCKVLPSFIQM+ETPPSKHIPNWLPAFPDPHTYIYTP
Sbjct: 121 FEYVNSVQEIPFAQPVPLFPIIKSCKVLPSFIQMKETPPSKHIPNWLPAFPDPHTYIYTP 180

Query: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEELPSFDSNTPHDIELQP 240
           VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRL+VNTGNLEEELPSFDSNT HDIELQP
Sbjct: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLIVNTGNLEEELPSFDSNTSHDIELQP 240

Query: 241 RENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDEEGVKKALPIVRPVVQ 300
           RENVVS VKSSLKHSDN FD+SSHVLEAFAPAIEAVKGSGFYDDEEG KKALPIVRPVVQ
Sbjct: 241 RENVVSAVKSSLKHSDNVFDESSHVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPVVQ 300

Query: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 315
           FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360

[Close]

BLAST of CsGy6G024060 vs. NCBI nr
Match: XP_038882077.1 (transcription initiation factor TFIID subunit 8 [Benincasa hispida])

HSP 1 Score: 547 bits (1409), Expect = 3.87e-194
Identity = 292/359 (81.34%), Postives = 296/359 (82.45%), Query Frame = 0


Query: 1   MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
           MSHGGGNITRENENQVD  R+ G DDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV
Sbjct: 1   MSHGGGNITRENENQVDHIRKTGADDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60

Query: 61  IVYLSDLG--------------------------------------------SRTIQEIF 120
           IVYLSDLG                                            SR IQEIF
Sbjct: 61  IVYLSDLGKMTSFYSNLAGRTECNVFDIVRGLKDLEAPGSHQDGEVSRCLAGSRIIQEIF 120

Query: 121 EYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180
           EYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV
Sbjct: 121 EYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180

Query: 181 WNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEELPSFDSNTPHDIELQPR 240
           WNKR TDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEE+ S DSNT HD ELQPR
Sbjct: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEEVLSLDSNTSHDTELQPR 240

Query: 241 ENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDEEGVKKALPIVRPVVQF 300
           EN VSVVKS LKHSDN FDDSS VLEAFAPAIEAVKGSGFYDDE+G KKA+PIVR  VQF
Sbjct: 241 ENAVSVVKSPLKHSDNMFDDSSSVLEAFAPAIEAVKGSGFYDDEDGEKKAIPIVRSAVQF 300

Query: 301 KFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 315
           KFKTGKKLLGDSLDLNIQKKGMGRTV  VGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLNIQKKGMGRTVSFVGRDDERDDKKRRAEYILRQSVENPQELNQL 359

[Close]

BLAST of CsGy6G024060 vs. ExPASy TrEMBL
Match: A0A0A0KF51 (Transcription initiation factor TFIID subunit 8 OS=Cucumis sativus OX=3659 GN=Csa_6G446430 PE=3 SV=1)

HSP 1 Score: 597 bits (1540), Expect = 2.16e-214
Identity = 314/360 (87.22%), Postives = 315/360 (87.50%), Query Frame = 0


Query: 1   MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
           MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV
Sbjct: 1   MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60

Query: 61  IVYLSDLG---------------------------------------------SRTIQEI 120
           IVYLSDLG                                             SRTIQEI
Sbjct: 61  IVYLSDLGKMASFYSNLAGRTECNVFDIVRGFKDLEAPGSSHQDAEVSRCLAGSRTIQEI 120

Query: 121 FEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTP 180
           FEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTP
Sbjct: 121 FEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTP 180

Query: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEELPSFDSNTPHDIELQP 240
           VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEELPSFDSNTPHDIELQP
Sbjct: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEELPSFDSNTPHDIELQP 240

Query: 241 RENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDEEGVKKALPIVRPVVQ 300
           RENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDEEGVKKALPIVRP+VQ
Sbjct: 241 RENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDEEGVKKALPIVRPLVQ 300

Query: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 315
           FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360

[Close]

BLAST of CsGy6G024060 vs. ExPASy TrEMBL
Match: A0A5D3C832 (Transcription initiation factor TFIID subunit 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00220 PE=3 SV=1)

HSP 1 Score: 582 bits (1500), Expect = 2.68e-208
Identity = 305/360 (84.72%), Postives = 311/360 (86.39%), Query Frame = 0


Query: 1   MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
           MSHGGGNITRENENQVDRFRRGGGDDFGR+VSKIAAAQICQSLGFQGSKESAMDTLAEIV
Sbjct: 1   MSHGGGNITRENENQVDRFRRGGGDDFGRQVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60

Query: 61  IVYLSDLG---------------------------------------------SRTIQEI 120
           +VYLSDLG                                             SRTIQEI
Sbjct: 61  VVYLSDLGKMASFYSNLAGRTECNVFDIVRGFKDLEAPGSSHQDAEVSRCLAGSRTIQEI 120

Query: 121 FEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTP 180
           FEYVNSVQEIPFAQPVP+FPIIKSCKVLPSFIQM+ETPPSKHIPNWLPAFPDPHTYIYTP
Sbjct: 121 FEYVNSVQEIPFAQPVPQFPIIKSCKVLPSFIQMKETPPSKHIPNWLPAFPDPHTYIYTP 180

Query: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEELPSFDSNTPHDIELQP 240
           VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRL+VNTGNLEEELPSFDSNT HDIELQP
Sbjct: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLIVNTGNLEEELPSFDSNTSHDIELQP 240

Query: 241 RENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDEEGVKKALPIVRPVVQ 300
           RENVVS VKSSLKHSDN FD+SSHVLEAFAPAIEAVKGSGFYDDEEG KKALPIVRPVVQ
Sbjct: 241 RENVVSAVKSSLKHSDNVFDESSHVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPVVQ 300

Query: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 315
           FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360

[Close]

BLAST of CsGy6G024060 vs. ExPASy TrEMBL
Match: A0A1S3CH15 (Transcription initiation factor TFIID subunit 8 OS=Cucumis melo OX=3656 GN=LOC103500817 PE=3 SV=1)

HSP 1 Score: 581 bits (1497), Expect = 7.68e-208
Identity = 305/360 (84.72%), Postives = 310/360 (86.11%), Query Frame = 0


Query: 1   MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
           MSHGGGNITRENENQVDRFRRGGGDDFGR+VSKIAAAQICQSLGFQGSKESAMDTLAEIV
Sbjct: 1   MSHGGGNITRENENQVDRFRRGGGDDFGRQVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60

Query: 61  IVYLSDLG---------------------------------------------SRTIQEI 120
           +VYLSDLG                                             SRTIQEI
Sbjct: 61  VVYLSDLGKMASFYSNLAGRTECNVFDIVRGFKDLEAPGSSHQDAEVSRCLAGSRTIQEI 120

Query: 121 FEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTP 180
           FEYVNSVQEIPFAQPVP FPIIKSCKVLPSFIQM+ETPPSKHIPNWLPAFPDPHTYIYTP
Sbjct: 121 FEYVNSVQEIPFAQPVPLFPIIKSCKVLPSFIQMKETPPSKHIPNWLPAFPDPHTYIYTP 180

Query: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEELPSFDSNTPHDIELQP 240
           VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRL+VNTGNLEEELPSFDSNT HDIELQP
Sbjct: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLIVNTGNLEEELPSFDSNTSHDIELQP 240

Query: 241 RENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDEEGVKKALPIVRPVVQ 300
           RENVVS VKSSLKHSDN FD+SSHVLEAFAPAIEAVKGSGFYDDEEG KKALPIVRPVVQ
Sbjct: 241 RENVVSAVKSSLKHSDNVFDESSHVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPVVQ 300

Query: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 315
           FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360

[Close]

BLAST of CsGy6G024060 vs. ExPASy TrEMBL
Match: A0A6J1IV18 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=LOC111478655 PE=3 SV=1)

HSP 1 Score: 525 bits (1352), Expect = 8.94e-186
Identity = 282/359 (78.55%), Postives = 289/359 (80.50%), Query Frame = 0


Query: 1   MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
           MSHGGGNITRENEN  DRFRR G DDFGREVSK+AAAQICQSLGFQGSKESA+DTLAEIV
Sbjct: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60

Query: 61  IVYLSDLG--------------------------------------------SRTIQEIF 120
           IVYLSDLG                                            S TIQEIF
Sbjct: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDDEVSRCLAGSHTIQEIF 120

Query: 121 EYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180
           EYVNSVQEIPFAQP+ +FPIIKS KVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV
Sbjct: 121 EYVNSVQEIPFAQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180

Query: 181 WNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEELPSFDSNTPHDIELQPR 240
           WNKR TDPRTDKIEQARQRRKAEKSLLSLQQ+LVVNT +LEEELPS DS+  HD ELQPR
Sbjct: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPR 240

Query: 241 ENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDEEGVKKALPIVRPVVQF 300
           EN VSVVKS LKHSD  FDDSS VLEAFAPAIEAVKGSGFYDDEEG KK LPIVRP VQF
Sbjct: 241 ENTVSVVKSPLKHSDTVFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF 300

Query: 301 KFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 315
           KFKTGKKLLGDSLDL IQKKG GR   LVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 359

[Close]

BLAST of CsGy6G024060 vs. ExPASy TrEMBL
Match: A0A6J1EGW4 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN=LOC111433266 PE=3 SV=1)

HSP 1 Score: 524 bits (1350), Expect = 1.80e-185
Identity = 281/359 (78.27%), Postives = 289/359 (80.50%), Query Frame = 0


Query: 1   MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
           MSHGGGNITRENEN  DRFRR G DDFGREVSK+AAAQICQSLGFQGSKESA+DTLAEIV
Sbjct: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60

Query: 61  IVYLSDLG--------------------------------------------SRTIQEIF 120
           IVYLSDLG                                            SRTIQEIF
Sbjct: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF 120

Query: 121 EYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180
           EYVNSVQEIPF+QP+ +FPIIKS KVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV
Sbjct: 121 EYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180

Query: 181 WNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEELPSFDSNTPHDIELQPR 240
           WNKR TDPRTDKIEQARQRRKAEKSLLSLQQ+LVVNT +LEEELPS DS+  HD ELQPR
Sbjct: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPR 240

Query: 241 ENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDEEGVKKALPIVRPVVQF 300
           EN VSVVKS LKHSD  FDDSS VLE FAPAIEAVKGSGFYDDEEG KK LPIVRP VQF
Sbjct: 241 ENTVSVVKSPLKHSDTVFDDSSSVLEVFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF 300

Query: 301 KFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 315
           KFKTGKKLLGDSLDL IQKKG GR   LVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 359

[Close]

BLAST of CsGy6G024060 vs. TAIR 10
Match: AT4G34340.1 (TBP-associated factor 8 )

HSP 1 Score: 218.8 bits (556), Expect = 6.3e-57
Identity = 135/338 (39.94%), Postives = 194/338 (57.40%), Query Frame = 0


Query: 26  DFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIVIVYLSDLG----------------- 85
           +F    +K A AQ+C+S+G++  K+ A+++L+   + Y+  LG                 
Sbjct: 25  EFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQYILQLGKTATSFANLTGRSQCNV 84

Query: 86  ----------------------------SRTIQEIFEYVNSVQEIPFAQPVPRFPII--- 145
                                       S  ++EI ++VNS +E+PF+QP+P FP+    
Sbjct: 85  FDIILALDDLTDNNGEQGISSESCSLGRSIKLREIIDFVNSSEEVPFSQPLPSFPVAISD 144

Query: 146 KSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPVWNKRTTDPRTDKIEQARQRRK 205
           +S K++PSF+++ ETPP KHIP WLPAFPDPHTY  TP+W +R +DPR DKIEQARQRRK
Sbjct: 145 RSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKETPMWIERVSDPRGDKIEQARQRRK 204

Query: 206 AEKSLLSLQQRLVVNTGNLEEELPSFDSNTPHDIELQPRENVVSVVKSSLKHSDNDFDDS 265
           AE++LLSLQ++LV     +    P +        E++  E+ +  V S  K    + D  
Sbjct: 205 AERALLSLQRKLVC---KISSRNPVWGDMDGVKEEMRDDESELRSVSSGEKVESLNRDGL 264

Query: 266 SHVLEAFAPAIEAVKGSGFYDDEEGVKKALPIVRPVVQFKFKTGKKLLGDSLDLNIQKKG 316
           S V+EAFAPA+EA +  GF  +     K     +PV   K +T KK LG  LDL++Q KG
Sbjct: 265 S-VIEAFAPAMEAAR-DGFSSEAHTEWKK---NKPVALSKLRTEKKFLGQPLDLSLQMKG 324

[Close]

BLAST of CsGy6G024060 vs. TAIR 10
Match: AT5G15570.1 (Bromodomain transcription factor )

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-14
Identity = 62/248 (25.00%), Postives = 102/248 (41.13%), Query Frame = 0


Query: 1   MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQS---------------LGF 60
           M +GGG    +      +     G+DF   ++++A AQIC+S               L F
Sbjct: 1   MINGGGEGGSQRRELQGKRSMSRGNDFAYALARMATAQICESVEINSYQESSQSREGLRF 60

Query: 61  QGSKESAMDTLAEIVIVYLSDLG------------------------------------- 120
              +E+A++TL ++VI Y+ ++G                                     
Sbjct: 61  SSFQETALETLTDVVIQYIQNIGKTAQFYVNMAGRVESNALDIVQALEDLGSGLGFDGAH 120

Query: 121 --------SRTIQEIFEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPN 180
                   S  +++I  Y    +EIPF   +PRFP  +  +  PSF  +   PP +HIP 
Sbjct: 121 DVEHCLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFNRGKRPAPSFSDIGVEPPDEHIPV 180

Query: 181 WLPAFPDPHTYIYTPVWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEEL 189
           WLPAFP+          +  + +   DKIE+  Q R    SL+S+QQ + V+   +++ +
Sbjct: 181 WLPAFPETK-------MSNGSEEINVDKIERDVQSRDNGSSLMSVQQSVDVDRLKVQKSM 240

[Close]

BLAST of CsGy6G024060 vs. TAIR 10
Match: AT3G02160.1 (Bromodomain transcription factor )

HSP 1 Score: 76.6 bits (187), Expect = 3.9e-14
Identity = 51/182 (28.02%), Postives = 76/182 (41.76%), Query Frame = 0


Query: 5   GGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQS--------------LGFQGSKE 64
           GG+  RE   +   FR   G+DF   ++++A AQIC+S              + F   +E
Sbjct: 24  GGSQQRELHGKRKLFR---GNDFAFSIARMAVAQICESVEVNPYQESQTREGVRFSSFQE 83

Query: 65  SAMDTLAEIVIVYLSDLG------------------------------------------ 124
           SA+DTL ++ + Y+  +G                                          
Sbjct: 84  SALDTLTDVAVQYIQSIGKTAHLYANLAGRVDGNSLDILQALEDLGSGLGFAGVSDTDHC 143

Query: 125 ---SRTIQEIFEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAF 128
              S  +++I  Y    +EIPF   +PRFP  K  K  PSF ++   PP +HIP WLPAF
Sbjct: 144 LADSGVVKDIIRYTGEAEEIPFVYSLPRFPFSKEKKPAPSFSEVGAEPPDEHIPVWLPAF 202

[Close]

BLAST of CsGy6G024060 vs. TAIR 10
Match: AT1G31240.1 (Bromodomain transcription factor )

HSP 1 Score: 45.8 bits (107), Expect = 7.3e-05
Identity = 38/153 (24.84%), Postives = 60/153 (39.22%), Query Frame = 0


Query: 26  DFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIVIVYL----------SDLGSRTIQEI 85
           +F   ++KIA +QICQS+G++ +  SA++TL      +L          S+  +RT   +
Sbjct: 25  EFSFSLTKIAVSQICQSIGYKATDASALNTLTLTTTKFLQSLAELASSFSNTANRTEVNL 84

Query: 86  FEYVNSVQ-----------------------------------------EIPFAQPVPRF 128
           F+ VN +Q                                         EIPFA+P+PR 
Sbjct: 85  FDIVNGLQDIALSTSDCFPGGSTVHDIESQCLIKSAVLRNLSDFVTYAPEIPFAKPLPRR 144

The following BLAST results are available for this feature:

BLAST of CsGy6G024060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYZ9	8.9e-56	39.94	Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9EQH4	1.5e-10	24.38	Transcription initiation factor TFIID subunit 8 OS=Mus musculus OX=10090 GN=Taf8...	[more]
A7MAZ4	1.6e-09	24.03	Transcription initiation factor TFIID subunit 8 OS=Bos taurus OX=9913 GN=TAF8 PE...	[more]
Q7Z7C8	1.6e-09	23.67	Transcription initiation factor TFIID subunit 8 OS=Homo sapiens OX=9606 GN=TAF8 ...	[more]
Q7ZYA2	1.4e-08	23.38	Transcription initiation factor TFIID subunit 8 OS=Xenopus laevis OX=8355 GN=taf...	[more]

BLAST of CsGy6G024060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031743417.1	2.45e-223	99.68	transcription initiation factor TFIID subunit 8 isoform X2 [Cucumis sativus] >KA...	[more]
XP_011657663.1	4.46e-214	87.22	transcription initiation factor TFIID subunit 8 isoform X1 [Cucumis sativus]	[more]
KAA0063816.1	5.54e-208	84.72	transcription initiation factor TFIID subunit 8-like [Cucumis melo var. makuwa] ...	[more]
XP_008462468.1	1.59e-207	84.72	PREDICTED: transcription initiation factor TFIID subunit 8-like [Cucumis melo]	[more]
XP_038882077.1	3.87e-194	81.34	transcription initiation factor TFIID subunit 8 [Benincasa hispida]	[more]

BLAST of CsGy6G024060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF51	2.16e-214	87.22	Transcription initiation factor TFIID subunit 8 OS=Cucumis sativus OX=3659 GN=Cs...	[more]
A0A5D3C832	2.68e-208	84.72	Transcription initiation factor TFIID subunit 8 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3CH15	7.68e-208	84.72	Transcription initiation factor TFIID subunit 8 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1IV18	8.94e-186	78.55	Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EGW4	1.80e-185	78.27	Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CsGy6G024060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34340.1	6.3e-57	39.94	TBP-associated factor 8	[more]
AT5G15570.1	1.0e-14	25.00	Bromodomain transcription factor	[more]
AT3G02160.1	3.9e-14	28.02	Bromodomain transcription factor	[more]
AT1G31240.1	7.3e-05	24.84	Bromodomain transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006565	Bromodomain associated domain	PFAM	PF07524	Bromo_TP	coord: 28..70 e-value: 4.4E-7 score: 29.8
IPR019473	Transcription factor TFIID, subunit 8, C-terminal	PFAM	PF10406	TAF8_C	coord: 117..165 e-value: 4.3E-21 score: 75.2
IPR019473	Transcription factor TFIID, subunit 8, C-terminal	CDD	cd08049	TAF8	coord: 117..169 e-value: 4.1112E-25 score: 93.4915
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 24..83 e-value: 1.8E-8 score: 35.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR46338:SF1	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8	coord: 1..70 coord: 68..315
IPR037818	Transcription initiation factor TFIID subunit 8	PANTHER	PTHR46338	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8	coord: 1..70 coord: 68..315

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G024060.2	CsGy6G024060.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005669	transcription factor TFIID complex
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0003743	translation initiation factor activity