CsGy6G023240 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G023240
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	protein LATERAL ROOT PRIMORDIUM 1-like
Location	Gy14Chr6: 23472863 .. 23475210 (-)
RNA-Seq Expression	CsGy6G023240
Synteny	CsGy6G023240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCGAGCAATTGTGAGTATTATTATTGGAGAGAGAGAGAGAAAAACCCCACTTTCATATTCTCTTTCTAGCAAACATATTCACAATAGAAAGAGAGAAAAAAAGGGATTATTTTTAGTTTTTAATTTTTGTAAAAAAGCAGAAGAAGAAGCAGAAGAAATGGAAGGTGGAGAAGATGATAAAATGAAAGGAAAGAAATGAATCTCCTAATTAAAACTCCACTTTCTTTTCTTTCCCTCTGCTTCTCCTAAAAGCCAAACTCTCTGTCACACTCTTCAGAACCCAAAGCAGAAGCAACAGCAGCAGCCATAACAGAAGCAGAAGCAGAAGCAAAATTATAAAATCCCCTTCAAGAACAAAAAAAATTTTAAAAAAAGGAAAAGGAAAAGAAAGAAGAAAAACAAAATCTCCCTCTTCTTCCCTCCCTTTTTCTGTCTACAAAATCTCTCTGCTACAAATTCAGAGAAAGACCCCACTTCCCATATAACACCTACATAGATTGTGTTCCACCTCCCTAAATCTTTTTCCCTTCAAACCCCATCTCAGTTTAACTCCATTTCTATTCATATATTCTTTCAAAATTTAATTTTTTTTTGTTTATATACATATTTACATATATATATATTTCCATATTTAACCCCATCCTCCACCTTCAGTTGTGGCTACTACAAGGCGGTTACCTTCAGATTCCGGCGCTTTTGCAGATTGGGCGGCACCCTCTTCCTCAGCCGCCCGTGCTGCTCCTCCTGATGATCTTTCTCTTGGTTTCAATGCTGCTCCCTCCGCCGCACCTCCTCCTGGACCTCCTGTCTCCATGTGGTCCGCTGCTGCTCAGCGTTCTCTCAATTACGGCTTTGGATCCGAGATGGGAATGGTTGGTCTTCGTGATGTCTACGTCGTTGCTCCGGCTTCTTCTTTCAACCAAAATCCTCAACAACACGATGTTAATCTCCTCTCCGATCCTCATTCTCTCGCTGTTTCCAATCCTGCCACTGCTCTCGGCGTTGGTGTAGGCGTTGGGGTTATTCCGCTACTTACCGCCGGTCCCTGCCTTGGAGTGGAGGAGGAGAATTTTTTCGGTAATCGTAGTAACAGAGGTGGAGGGATTCAGTTTCAACAATCGACGCAACATTATTTAAAGAAAACGCCGTCGGGTTCTCTCGATCATGTTTCCGGTACTAATAACGAGTTAATCGGTGGTGGAATCGGGGGTTCTGGTGGTTTGGCTTCGTCTTCGTCGGCGACGACGACGTGTCAGGACTGTGGTAACCAAGCCAAGAAAGATTGTAGTCACAGACGGTGTAGAACTTGCTGTAGAAGTCGAGGGTTCGATTGTGCTACTCACGTGAAGAGCACGTGGGTTCCTGCTGCTCGACGGAGAGAACGGCAACTTATGGCGGTTACTGCTACCGCTGCCGCGGATGGCTCCTCCGCGTCCACCTCCGGCGCGAAGAAACCCCGGCTAATTCCCTCGCAAACGACTTCTCATACCTCCACTTCCAACACCACTCCTCCGAGAAGCCTCGATACGAGCTCCAGTCATCAAGGTAGAAGGAAATTCTTCCAAATTTAGGGTTTCGATTTTTTGTTTCTGTCGAAATGCCTTTCAATCTGTTATCTATCGGTTTCGTGAGCCTAACATTCGGCTAGTGAACGTGTGTCGATTCTGCTCTATTTTGTTTGTCAGATTCGTAACAATTTTCGGCGTTTAATTTTTCTTTCCCTCAATTTGCTTTGGTTCAGATGCTGGGAATAAAGAGGCACTGCCGGGGCAAATACGAGCACAGGCGGTGTTCAAGTGCGTGAGAGTGACGGCTGTGGACGACGGCGACGACGAGTATGCGTATCATGCGATGGTGAAAATTGGGGGCCATGTGTTCAAAGGATTTTTGTACGATCAAGGCGTTGAAGCAGGAGACGGATTTCCTAATGTATCAGAATTGCATTTAGGCGACGGTGGCGGTGGCGGTGGAACCATGAATAATCGGAATGGTTCATCTTCTTCCCCGCTTGTTGATCCATCGGATGTTTACAATACTGCCGGCTCCGGCAGCGGCGGCGTCCCGGGTTTTCTTGGTGGATCAAATTATGGTAATCAAATTAGTTGATATATATATATATTATTCTGATTTTCTTAACAGTTCAACATTCTTCCCCAAATCAATGGGAAGGGAACTAACCAATCTTATCTTTAGAAAATCTCATTTTATTTATGTCTAATCTGATTGTGTATAACTAATTTCTCTCAACTCTGATCTTGCAACTTTCATAATGAATCGAGTCATTTACAAATCTGGGGGCATCTGTTCTTGAATATGTTATGAGGATTGGTATCTGTTCTTGCATGC

mRNA sequence

CTCCGAGCAATTGTGAGTATTATTATTGGAGAGAGAGAGAGAAAAACCCCACTTTCATATTCTCTTTCTAGCAAACATATTCACAATAGAAAGAGAGAAAAAAAGGGATTATTTTTAGTTTTTAATTTTTGTAAAAAAGCAGAAGAAGAAGCAGAAGAAATGGAAGGTGGAGAAGATGATAAAATGAAAGGAAAGAAATGAATCTCCTAATTAAAACTCCACTTTCTTTTCTTTCCCTCTGCTTCTCCTAAAAGCCAAACTCTCTGTCACACTCTTCAGAACCCAAAGCAGAAGCAACAGCAGCAGCCATAACAGAAGCAGAAGCAGAAGCAAAATTATAAAATCCCCTTCAAGAACAAAAAAAATTTTAAAAAAAGGAAAAGGAAAAGAAAGAAGAAAAACAAAATCTCCCTCTTCTTCCCTCCCTTTTTCTGTCTACAAAATCTCTCTGCTACAAATTCAGAGAAAGACCCCACTTCCCATATAACACCTACATAGATTGTGTTCCACCTCCCTAAATCTTTTTCCCTTCAAACCCCATCTCAGTTTAACTCCATTTCTATTCATATATTCTTTCAAAATTTAATTTTTTTTTGTTTATATACATATTTACATATATATATATTTCCATATTTAACCCCATCCTCCACCTTCAGTTGTGGCTACTACAAGGCGGTTACCTTCAGATTCCGGCGCTTTTGCAGATTGGGCGGCACCCTCTTCCTCAGCCGCCCGTGCTGCTCCTCCTGATGATCTTTCTCTTGGTTTCAATGCTGCTCCCTCCGCCGCACCTCCTCCTGGACCTCCTGTCTCCATGTGGTCCGCTGCTGCTCAGCGTTCTCTCAATTACGGCTTTGGATCCGAGATGGGAATGGTTGGTCTTCGTGATGTCTACGTCGTTGCTCCGGCTTCTTCTTTCAACCAAAATCCTCAACAACACGATGTTAATCTCCTCTCCGATCCTCATTCTCTCGCTGTTTCCAATCCTGCCACTGCTCTCGGCGTTGGTGTAGGCGTTGGGGTTATTCCGCTACTTACCGCCGGTCCCTGCCTTGGAGTGGAGGAGGAGAATTTTTTCGGTAATCGTAGTAACAGAGGTGGAGGGATTCAGTTTCAACAATCGACGCAACATTATTTAAAGAAAACGCCGTCGGGTTCTCTCGATCATGTTTCCGGTACTAATAACGAGTTAATCGGTGGTGGAATCGGGGGTTCTGGTGGTTTGGCTTCGTCTTCGTCGGCGACGACGACGTGTCAGGACTGTGGTAACCAAGCCAAGAAAGATTGTAGTCACAGACGGTGTAGAACTTGCTGTAGAAGTCGAGGGTTCGATTGTGCTACTCACGTGAAGAGCACGTGGGTTCCTGCTGCTCGACGGAGAGAACGGCAACTTATGGCGGTTACTGCTACCGCTGCCGCGGATGGCTCCTCCGCGTCCACCTCCGGCGCGAAGAAACCCCGGCTAATTCCCTCGCAAACGACTTCTCATACCTCCACTTCCAACACCACTCCTCCGAGAAGCCTCGATACGAGCTCCAGTCATCAAGATGCTGGGAATAAAGAGGCACTGCCGGGGCAAATACGAGCACAGGCGGTGTTCAAGTGCGTGAGAGTGACGGCTGTGGACGACGGCGACGACGAGTATGCGTATCATGCGATGGTGAAAATTGGGGGCCATGTGTTCAAAGGATTTTTGTACGATCAAGGCGTTGAAGCAGGAGACGGATTTCCTAATGTATCAGAATTGCATTTAGGCGACGGTGGCGGTGGCGGTGGAACCATGAATAATCGGAATGGTTCATCTTCTTCCCCGCTTGTTGATCCATCGGATGTTTACAATACTGCCGGCTCCGGCAGCGGCGGCGTCCCGGGTTTTCTTGGTGGATCAAATTATGGTAATCAAATTAGTTGATATATATATATATTATTCTGATTTTCTTAACAGTTCAACATTCTTCCCCAAATCAATGGGAAGGGAACTAACCAATCTTATCTTTAGAAAATCTCATTTTATTTATGTCTAATCTGATTGTGTATAACTAATTTCTCTCAACTCTGATCTTGCAACTTTCATAATGAATCGAGTCATTTACAAATCTGGGGGCATCTGTTCTTGAATATGTTATGAGGATTGGTATCTGTTCTTGCATGC

Coding sequence (CDS)

ATGTGGTCCGCTGCTGCTCAGCGTTCTCTCAATTACGGCTTTGGATCCGAGATGGGAATGGTTGGTCTTCGTGATGTCTACGTCGTTGCTCCGGCTTCTTCTTTCAACCAAAATCCTCAACAACACGATGTTAATCTCCTCTCCGATCCTCATTCTCTCGCTGTTTCCAATCCTGCCACTGCTCTCGGCGTTGGTGTAGGCGTTGGGGTTATTCCGCTACTTACCGCCGGTCCCTGCCTTGGAGTGGAGGAGGAGAATTTTTTCGGTAATCGTAGTAACAGAGGTGGAGGGATTCAGTTTCAACAATCGACGCAACATTATTTAAAGAAAACGCCGTCGGGTTCTCTCGATCATGTTTCCGGTACTAATAACGAGTTAATCGGTGGTGGAATCGGGGGTTCTGGTGGTTTGGCTTCGTCTTCGTCGGCGACGACGACGTGTCAGGACTGTGGTAACCAAGCCAAGAAAGATTGTAGTCACAGACGGTGTAGAACTTGCTGTAGAAGTCGAGGGTTCGATTGTGCTACTCACGTGAAGAGCACGTGGGTTCCTGCTGCTCGACGGAGAGAACGGCAACTTATGGCGGTTACTGCTACCGCTGCCGCGGATGGCTCCTCCGCGTCCACCTCCGGCGCGAAGAAACCCCGGCTAATTCCCTCGCAAACGACTTCTCATACCTCCACTTCCAACACCACTCCTCCGAGAAGCCTCGATACGAGCTCCAGTCATCAAGATGCTGGGAATAAAGAGGCACTGCCGGGGCAAATACGAGCACAGGCGGTGTTCAAGTGCGTGAGAGTGACGGCTGTGGACGACGGCGACGACGAGTATGCGTATCATGCGATGGTGAAAATTGGGGGCCATGTGTTCAAAGGATTTTTGTACGATCAAGGCGTTGAAGCAGGAGACGGATTTCCTAATGTATCAGAATTGCATTTAGGCGACGGTGGCGGTGGCGGTGGAACCATGAATAATCGGAATGGTTCATCTTCTTCCCCGCTTGTTGATCCATCGGATGTTTACAATACTGCCGGCTCCGGCAGCGGCGGCGTCCCGGGTTTTCTTGGTGGATCAAATTATGGTAATCAAATTAGTTGA

Protein sequence

MWSAAAQRSLNYGFGSEMGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNPATALGVGVGVGVIPLLTAGPCLGVEEENFFGNRSNRGGGIQFQQSTQHYLKKTPSGSLDHVSGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKSTWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDTSSSHQDAGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGVEAGDGFPNVSELHLGDGGGGGGTMNNRNGSSSSPLVDPSDVYNTAGSGSGGVPGFLGGSNYGNQIS*

Homology

[Close]

BLAST of CsGy6G023240 vs. ExPASy Swiss-Prot
Match: Q94CK9 (Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.3e-79
Identity = 187/344 (54.36%), Postives = 224/344 (65.12%), Query Frame = 0


Query: 18  MGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNPATALGVGVGVGVIPLLTAG 77
           MGMVGLRDV++VAPA          +  ++S    +   N   A    +GVGVIPLLTAG
Sbjct: 1   MGMVGLRDVFLVAPAY------HHQNAGVISGSDHM---NSNAAAAAALGVGVIPLLTAG 60

Query: 78  -PCLGVEEE--NFFGNRSNRGGGIQFQQSTQHYLKKTPSGSLDHVSGTNNELIGGGIGGS 137
            P   VE+   NF GN  NR            YL         H   TN   +G     S
Sbjct: 61  TPQQNVEDSDINFLGN--NRRWQNNNNNHETQYL---------HFKSTNQTTVGTSSNNS 120

Query: 138 GGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKSTWVPAARRRERQLM 197
           G   S +S T TCQDCGNQAKK+C  RRCRTCC+SRGFDC+THVKSTWV AARRRERQ+M
Sbjct: 121 GS-GSGASGTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM 180

Query: 198 AVTATAAADGSSASTSGAKKPRLIPS------QTTSHTSTSNTTPPRSLDTSSSHQD-AG 257
              A   A  S +++SG KKPR++ S      Q TSHTSTSN TPP+S +TSSS QD  G
Sbjct: 181 PTGANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSN-TPPQSFETSSSRQDGGG 240

Query: 258 NKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGVEAGDGFPN 317
           ++EA PGQ+RA AVFKCVRVTAV+DGDDEYAY A+VKIGGHVFKGFLYDQG+E  +GFP+
Sbjct: 241 SREAWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLEPKEGFPS 300

Query: 318 VSELHLGDGGGGGGTMNNRNG-SSSSPLVDPSDVYNTAGSGSGG 351
           +S+LHL      GG+ NN NG S+S+P++DP +V    G GSGG
Sbjct: 301 MSDLHL------GGSANNHNGVSASAPILDPPNVVYGGGGGSGG 316

[Close]

BLAST of CsGy6G023240 vs. ExPASy Swiss-Prot
Match: O65517 (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.4e-36
Identity = 95/215 (44.19%), Postives = 125/215 (58.14%), Query Frame = 0


Query: 139 SSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKSTWVPAARRRERQLMAVTA 198
           SS S T +C+DCGNQAKKDC+H RCRTCC+SRGFDC+THV+STW+P ARRRERQ     +
Sbjct: 86  SSRSITISCRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMS 145

Query: 199 TAAADGSS----ASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDTSSSHQDAGNKEALPG 258
           T+   G S    A   G+  P+     T   TS+S+  P  S            + + PG
Sbjct: 146 TSGGGGGSGSGGAGGGGSSIPKRHRDPTLPGTSSSSRLPSHSAGLEM------GEASFPG 205

Query: 259 QIRAQAVFKCVRVTAVDD-GDDEYAYHAMVKIGGHVFKGFLYDQGVEAG--DGFPNVSEL 318
           ++ + A+F+CV+++ VDD GD +YAY   V IGGH+FKG LYDQG E+    G    S+ 
Sbjct: 206 EVSSDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPESSYMSGGSGGSDH 265

Query: 319 HLGDGGGGGG--------TMNNRNGSSSSPLVDPS 339
                GGGGG          +   G SS+  VDP+
Sbjct: 266 QSSSAGGGGGGHPFNPPVVTDGGGGVSSAMFVDPN 294

[Close]

BLAST of CsGy6G023240 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 5.9e-35
Identity = 95/223 (42.60%), Postives = 124/223 (55.61%), Query Frame = 0


Query: 128 GGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKSTWVPAAR 187
           GG  GGSGG+        +CQDCGNQAKKDCSH RCRTCC+SRGF+C+THV+STWVPAA+
Sbjct: 133 GGSGGGSGGV--------SCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAK 192

Query: 188 RRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDTSSSHQDAG 247
           RRERQ    T           +   +    +P+ ++S   T           S S  + G
Sbjct: 193 RRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTR--------IPSHSGLEVG 252

Query: 248 NKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYD--QGVEAGDGF 307
           N    P ++ + AVF+CVRV++V+DG++E+AY   V IGGH+FKG LYD   G   G G+
Sbjct: 253 N---FPAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGY 312

Query: 308 PNVSELHLGDGGGGGGTMNNRNGSSSSPLVDPSDVYNTAGSGS 349
             V+      GGGG   +N     S +     S   N  G GS
Sbjct: 313 NVVAAGESSSGGGGAQQLNLITAGSVTVATASSSTPNLGGIGS 336

[Close]

BLAST of CsGy6G023240 vs. ExPASy Swiss-Prot
Match: Q9XGX0 (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.2e-32
Identity = 105/255 (41.18%), Postives = 136/255 (53.33%), Query Frame = 0


Query: 99  QFQQSTQHYLKKTPSGSLDHVSGTNNELIGGGIGGSGGLAS-SSSATTTCQDCGNQAKKD 158
           Q QQ  Q  L    S +   V  +N  LI    G    + S S S   +CQDCGNQ+KKD
Sbjct: 71  QQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGPSCQDCGNQSKKD 130

Query: 159 CSHRRCRTCCRSRGFDCATHVKSTWVPAARRRERQLMAVTATAAADGSSASTSGAKKPR- 218
           CSH RCRTCC+SRG DC THVKSTWVPAA+RRERQ    T      G      G   P+ 
Sbjct: 131 CSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLST------GQQPQQLGGSVPKR 190

Query: 219 ---LIPSQTTSHTSTSNTTPPRSLDTSSSHQDAGNKEALPGQIRAQAVFKCVRVTAVDDG 278
               IP+++TS   T      R    ++S  + GN    P ++ + AVF+CVRV++VDD 
Sbjct: 191 QRERIPARSTSMAYT------RIPSNNTSGLEVGN---FPPEVSSSAVFRCVRVSSVDDE 250

Query: 279 DDEYAYHAMVKIGGHVFKGFLYDQG----VEAGDGFPNVSELHLGDGGGGGGTMNNRN-- 338
           ++EYAY   V IGGHVFKG LYDQG      +G G   ++ +  G          + N  
Sbjct: 251 EEEYAYKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNLITAGPSASSSSPNVSCNNG 310

Query: 339 --GSSSSPLVDPSDV 341
             GS+S   +DP+ +
Sbjct: 311 VVGSTSDHYIDPASL 310

[Close]

BLAST of CsGy6G023240 vs. ExPASy Swiss-Prot
Match: Q9FXH7 (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 6.7e-31
Identity = 99/243 (40.74%), Postives = 126/243 (51.85%), Query Frame = 0


Query: 134 SGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKSTWVPAARRRER-- 193
           +GG   +      CQDCGNQAKKDC H RCRTCC+SRGFDC THVKSTWV AA+RRER  
Sbjct: 106 TGGFTVTRQGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQA 165

Query: 194 QLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDTSSSHQDAGNKEA 253
           QL  + A    D +S              +  S    S     R ++ SSS  +  +   
Sbjct: 166 QLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSH--- 225

Query: 254 LPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGVEAGDGFPNVS-- 313
           LP +I + AVF+C+RV+++DD D+EYAY   V IGGHVFKG LYDQG  +     + S  
Sbjct: 226 LPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHRYSSSLN 285

Query: 314 -------ELHLGDGGGGGGT------MNNRNGSSSSPLVDPSDVYNTAGSG-----SGGV 355
                   L+L D      T      +N  NGS     +DPS +Y    +      +GG 
Sbjct: 286 GETSHQHHLNLMDSTPSAATTNAVTAVNTNNGS-----IDPSSLYTAVATPFNAFVAGGT 340

[Close]

BLAST of CsGy6G023240 vs. NCBI nr
Match: XP_011657617.1 (protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN48103.1 hypothetical protein Csa_003714 [Cucumis sativus])

HSP 1 Score: 712 bits (1837), Expect = 2.21e-258
Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 0


Query: 1   MWSAAAQRSLNYGFGSEMGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNPAT 60
           MWSAAAQRSLNYGFGSEMGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNPAT
Sbjct: 1   MWSAAAQRSLNYGFGSEMGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNPAT 60

Query: 61  ALGVGVGVGVIPLLTAGPCLGVEEENFFGNRSNRGGGIQFQQSTQHYLKKTPSGSLDHVS 120
           ALGVGVGVGVIPLLTAGPCLGVEEENFFGNRSNRGGGIQFQQSTQHYLKKTPSGSLDHVS
Sbjct: 61  ALGVGVGVGVIPLLTAGPCLGVEEENFFGNRSNRGGGIQFQQSTQHYLKKTPSGSLDHVS 120

Query: 121 GTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKS 180
           GTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKS
Sbjct: 121 GTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKS 180

Query: 181 TWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDTS 240
           TWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDTS
Sbjct: 181 TWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDTS 240

Query: 241 SSHQDAGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGVE 300
           SSHQDAGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGVE
Sbjct: 241 SSHQDAGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGVE 300

Query: 301 AGDGFPNVSELHLGDGGGGGGTMNNRNGSSSSPLVDPSDVYNTAGSGSGGVPGFLGGSNY 360
           AGDGFPNVSELHLGDGGGGGGTMNNRNGSSSSPLVDPSDVYNTAGSGSGGVPGFLGGSNY
Sbjct: 301 AGDGFPNVSELHLGDGGGGGGTMNNRNGSSSSPLVDPSDVYNTAGSGSGGVPGFLGGSNY 360

Query: 361 GNQIS 365
           GNQIS
Sbjct: 361 GNQIS 365

[Close]

BLAST of CsGy6G023240 vs. NCBI nr
Match: XP_008449658.1 (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 691 bits (1782), Expect = 5.54e-250
Identity = 357/366 (97.54%), Postives = 359/366 (98.09%), Query Frame = 0


Query: 1   MWSAAAQRSLNYGFGSEMGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNPAT 60
           MWSAAAQRSLNYG GSEMGMVGLRDVYVVAPASSFNQNP QHDVNLLSDPHSLAVSNPAT
Sbjct: 1   MWSAAAQRSLNYGLGSEMGMVGLRDVYVVAPASSFNQNPHQHDVNLLSDPHSLAVSNPAT 60

Query: 61  ALGVGVGVGVIPLLTAGPCLGVEEENFFGNRS-NRGGGIQFQQSTQHYLKKTPSGSLDHV 120
           ALGVGVGVGVIPLLTAGPC+GVEEEN FGNRS NRGGGIQFQQSTQHYLKKTPSGSLDHV
Sbjct: 61  ALGVGVGVGVIPLLTAGPCVGVEEENLFGNRSSNRGGGIQFQQSTQHYLKKTPSGSLDHV 120

Query: 121 SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK 180
           SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK
Sbjct: 121 SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK 180

Query: 181 STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT 240
           STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT
Sbjct: 181 STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT 240

Query: 241 SSSHQDAGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV 300
           SSSHQD GNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV
Sbjct: 241 SSSHQDVGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV 300

Query: 301 EAGDGFPNVSELHLGDGGGGGGTMNNRNGSSSSPLVDPSDVYNTAGSGSGGVPGFLGGSN 360
           EAGDGFPNVSELHLGDG GGGGT+NNRNGSSSSPLVDPSDVYNTA SGSGGVPGFLGGSN
Sbjct: 301 EAGDGFPNVSELHLGDGVGGGGTINNRNGSSSSPLVDPSDVYNTAASGSGGVPGFLGGSN 360

Query: 361 YGNQIS 365
           YGNQIS
Sbjct: 361 YGNQIS 366

[Close]

BLAST of CsGy6G023240 vs. NCBI nr
Match: KAA0061772.1 (protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucumis melo var. makuwa] >TYJ96114.1 protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 691 bits (1782), Expect = 4.16e-249
Identity = 357/366 (97.54%), Postives = 359/366 (98.09%), Query Frame = 0


Query: 1   MWSAAAQRSLNYGFGSEMGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNPAT 60
           MWSAAAQRSLNYG GSEMGMVGLRDVYVVAPASSFNQNP QHDVNLLSDPHSLAVSNPAT
Sbjct: 55  MWSAAAQRSLNYGLGSEMGMVGLRDVYVVAPASSFNQNPHQHDVNLLSDPHSLAVSNPAT 114

Query: 61  ALGVGVGVGVIPLLTAGPCLGVEEENFFGNRS-NRGGGIQFQQSTQHYLKKTPSGSLDHV 120
           ALGVGVGVGVIPLLTAGPC+GVEEEN FGNRS NRGGGIQFQQSTQHYLKKTPSGSLDHV
Sbjct: 115 ALGVGVGVGVIPLLTAGPCVGVEEENLFGNRSSNRGGGIQFQQSTQHYLKKTPSGSLDHV 174

Query: 121 SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK 180
           SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK
Sbjct: 175 SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK 234

Query: 181 STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT 240
           STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT
Sbjct: 235 STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT 294

Query: 241 SSSHQDAGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV 300
           SSSHQD GNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV
Sbjct: 295 SSSHQDVGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV 354

Query: 301 EAGDGFPNVSELHLGDGGGGGGTMNNRNGSSSSPLVDPSDVYNTAGSGSGGVPGFLGGSN 360
           EAGDGFPNVSELHLGDG GGGGT+NNRNGSSSSPLVDPSDVYNTA SGSGGVPGFLGGSN
Sbjct: 355 EAGDGFPNVSELHLGDGVGGGGTINNRNGSSSSPLVDPSDVYNTAASGSGGVPGFLGGSN 414

Query: 361 YGNQIS 365
           YGNQIS
Sbjct: 415 YGNQIS 420

[Close]

BLAST of CsGy6G023240 vs. NCBI nr
Match: XP_008449660.1 (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X3 [Cucumis melo])

HSP 1 Score: 683 bits (1762), Expect = 5.53e-247
Identity = 353/362 (97.51%), Postives = 355/362 (98.07%), Query Frame = 0


Query: 1   MWSAAAQRSLNYGFGSEMGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNPAT 60
           MWSAAAQRSLNYG GSEMGMVGLRDVYVVAPASSFNQNP QHDVNLLSDPHSLAVSNPAT
Sbjct: 1   MWSAAAQRSLNYGLGSEMGMVGLRDVYVVAPASSFNQNPHQHDVNLLSDPHSLAVSNPAT 60

Query: 61  ALGVGVGVGVIPLLTAGPCLGVEEENFFGNRS-NRGGGIQFQQSTQHYLKKTPSGSLDHV 120
           ALGVGVGVGVIPLLTAGPC+GVEEEN FGNRS NRGGGIQFQQSTQHYLKKTPSGSLDHV
Sbjct: 61  ALGVGVGVGVIPLLTAGPCVGVEEENLFGNRSSNRGGGIQFQQSTQHYLKKTPSGSLDHV 120

Query: 121 SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK 180
           SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK
Sbjct: 121 SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK 180

Query: 181 STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT 240
           STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT
Sbjct: 181 STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT 240

Query: 241 SSSHQDAGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV 300
           SSSHQD GNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV
Sbjct: 241 SSSHQDVGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV 300

Query: 301 EAGDGFPNVSELHLGDGGGGGGTMNNRNGSSSSPLVDPSDVYNTAGSGSGGVPGFLGGSN 360
           EAGDGFPNVSELHLGDG GGGGT+NNRNGSSSSPLVDPSDVYNTA SGSGGVPGFLGGSN
Sbjct: 301 EAGDGFPNVSELHLGDGVGGGGTINNRNGSSSSPLVDPSDVYNTAASGSGGVPGFLGGSN 360

[Close]

BLAST of CsGy6G023240 vs. NCBI nr
Match: XP_008449659.1 (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 681 bits (1758), Expect = 2.34e-246
Identity = 352/361 (97.51%), Postives = 354/361 (98.06%), Query Frame = 0


Query: 1   MWSAAAQRSLNYGFGSEMGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNPAT 60
           MWSAAAQRSLNYG GSEMGMVGLRDVYVVAPASSFNQNP QHDVNLLSDPHSLAVSNPAT
Sbjct: 1   MWSAAAQRSLNYGLGSEMGMVGLRDVYVVAPASSFNQNPHQHDVNLLSDPHSLAVSNPAT 60

Query: 61  ALGVGVGVGVIPLLTAGPCLGVEEENFFGNRS-NRGGGIQFQQSTQHYLKKTPSGSLDHV 120
           ALGVGVGVGVIPLLTAGPC+GVEEEN FGNRS NRGGGIQFQQSTQHYLKKTPSGSLDHV
Sbjct: 61  ALGVGVGVGVIPLLTAGPCVGVEEENLFGNRSSNRGGGIQFQQSTQHYLKKTPSGSLDHV 120

Query: 121 SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK 180
           SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK
Sbjct: 121 SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK 180

Query: 181 STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT 240
           STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT
Sbjct: 181 STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT 240

Query: 241 SSSHQDAGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV 300
           SSSHQD GNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV
Sbjct: 241 SSSHQDVGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV 300

Query: 301 EAGDGFPNVSELHLGDGGGGGGTMNNRNGSSSSPLVDPSDVYNTAGSGSGGVPGFLGGSN 360
           EAGDGFPNVSELHLGDG GGGGT+NNRNGSSSSPLVDPSDVYNTA SGSGGVPGFLGGSN
Sbjct: 301 EAGDGFPNVSELHLGDGVGGGGTINNRNGSSSSPLVDPSDVYNTAASGSGGVPGFLGGSN 360

[Close]

BLAST of CsGy6G023240 vs. ExPASy TrEMBL
Match: A0A0A0KF01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G432270 PE=3 SV=1)

HSP 1 Score: 712 bits (1837), Expect = 1.07e-258
Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 0


Query: 1   MWSAAAQRSLNYGFGSEMGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNPAT 60
           MWSAAAQRSLNYGFGSEMGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNPAT
Sbjct: 1   MWSAAAQRSLNYGFGSEMGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNPAT 60

Query: 61  ALGVGVGVGVIPLLTAGPCLGVEEENFFGNRSNRGGGIQFQQSTQHYLKKTPSGSLDHVS 120
           ALGVGVGVGVIPLLTAGPCLGVEEENFFGNRSNRGGGIQFQQSTQHYLKKTPSGSLDHVS
Sbjct: 61  ALGVGVGVGVIPLLTAGPCLGVEEENFFGNRSNRGGGIQFQQSTQHYLKKTPSGSLDHVS 120

Query: 121 GTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKS 180
           GTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKS
Sbjct: 121 GTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKS 180

Query: 181 TWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDTS 240
           TWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDTS
Sbjct: 181 TWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDTS 240

Query: 241 SSHQDAGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGVE 300
           SSHQDAGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGVE
Sbjct: 241 SSHQDAGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGVE 300

Query: 301 AGDGFPNVSELHLGDGGGGGGTMNNRNGSSSSPLVDPSDVYNTAGSGSGGVPGFLGGSNY 360
           AGDGFPNVSELHLGDGGGGGGTMNNRNGSSSSPLVDPSDVYNTAGSGSGGVPGFLGGSNY
Sbjct: 301 AGDGFPNVSELHLGDGGGGGGTMNNRNGSSSSPLVDPSDVYNTAGSGSGGVPGFLGGSNY 360

Query: 361 GNQIS 365
           GNQIS
Sbjct: 361 GNQIS 365

[Close]

BLAST of CsGy6G023240 vs. ExPASy TrEMBL
Match: A0A1S3BMJ0 (protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491474 PE=3 SV=1)

HSP 1 Score: 691 bits (1782), Expect = 2.68e-250
Identity = 357/366 (97.54%), Postives = 359/366 (98.09%), Query Frame = 0


Query: 1   MWSAAAQRSLNYGFGSEMGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNPAT 60
           MWSAAAQRSLNYG GSEMGMVGLRDVYVVAPASSFNQNP QHDVNLLSDPHSLAVSNPAT
Sbjct: 1   MWSAAAQRSLNYGLGSEMGMVGLRDVYVVAPASSFNQNPHQHDVNLLSDPHSLAVSNPAT 60

Query: 61  ALGVGVGVGVIPLLTAGPCLGVEEENFFGNRS-NRGGGIQFQQSTQHYLKKTPSGSLDHV 120
           ALGVGVGVGVIPLLTAGPC+GVEEEN FGNRS NRGGGIQFQQSTQHYLKKTPSGSLDHV
Sbjct: 61  ALGVGVGVGVIPLLTAGPCVGVEEENLFGNRSSNRGGGIQFQQSTQHYLKKTPSGSLDHV 120

Query: 121 SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK 180
           SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK
Sbjct: 121 SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK 180

Query: 181 STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT 240
           STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT
Sbjct: 181 STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT 240

Query: 241 SSSHQDAGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV 300
           SSSHQD GNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV
Sbjct: 241 SSSHQDVGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV 300

Query: 301 EAGDGFPNVSELHLGDGGGGGGTMNNRNGSSSSPLVDPSDVYNTAGSGSGGVPGFLGGSN 360
           EAGDGFPNVSELHLGDG GGGGT+NNRNGSSSSPLVDPSDVYNTA SGSGGVPGFLGGSN
Sbjct: 301 EAGDGFPNVSELHLGDGVGGGGTINNRNGSSSSPLVDPSDVYNTAASGSGGVPGFLGGSN 360

Query: 361 YGNQIS 365
           YGNQIS
Sbjct: 361 YGNQIS 366

[Close]

BLAST of CsGy6G023240 vs. ExPASy TrEMBL
Match: A0A5A7V0Q8 (Protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00770 PE=3 SV=1)

HSP 1 Score: 691 bits (1782), Expect = 2.01e-249
Identity = 357/366 (97.54%), Postives = 359/366 (98.09%), Query Frame = 0


Query: 1   MWSAAAQRSLNYGFGSEMGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNPAT 60
           MWSAAAQRSLNYG GSEMGMVGLRDVYVVAPASSFNQNP QHDVNLLSDPHSLAVSNPAT
Sbjct: 55  MWSAAAQRSLNYGLGSEMGMVGLRDVYVVAPASSFNQNPHQHDVNLLSDPHSLAVSNPAT 114

Query: 61  ALGVGVGVGVIPLLTAGPCLGVEEENFFGNRS-NRGGGIQFQQSTQHYLKKTPSGSLDHV 120
           ALGVGVGVGVIPLLTAGPC+GVEEEN FGNRS NRGGGIQFQQSTQHYLKKTPSGSLDHV
Sbjct: 115 ALGVGVGVGVIPLLTAGPCVGVEEENLFGNRSSNRGGGIQFQQSTQHYLKKTPSGSLDHV 174

Query: 121 SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK 180
           SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK
Sbjct: 175 SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK 234

Query: 181 STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT 240
           STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT
Sbjct: 235 STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT 294

Query: 241 SSSHQDAGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV 300
           SSSHQD GNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV
Sbjct: 295 SSSHQDVGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV 354

Query: 301 EAGDGFPNVSELHLGDGGGGGGTMNNRNGSSSSPLVDPSDVYNTAGSGSGGVPGFLGGSN 360
           EAGDGFPNVSELHLGDG GGGGT+NNRNGSSSSPLVDPSDVYNTA SGSGGVPGFLGGSN
Sbjct: 355 EAGDGFPNVSELHLGDGVGGGGTINNRNGSSSSPLVDPSDVYNTAASGSGGVPGFLGGSN 414

Query: 361 YGNQIS 365
           YGNQIS
Sbjct: 415 YGNQIS 420

[Close]

BLAST of CsGy6G023240 vs. ExPASy TrEMBL
Match: A0A1S3BN66 (protein LATERAL ROOT PRIMORDIUM 1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491474 PE=3 SV=1)

HSP 1 Score: 683 bits (1762), Expect = 2.68e-247
Identity = 353/362 (97.51%), Postives = 355/362 (98.07%), Query Frame = 0


Query: 1   MWSAAAQRSLNYGFGSEMGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNPAT 60
           MWSAAAQRSLNYG GSEMGMVGLRDVYVVAPASSFNQNP QHDVNLLSDPHSLAVSNPAT
Sbjct: 1   MWSAAAQRSLNYGLGSEMGMVGLRDVYVVAPASSFNQNPHQHDVNLLSDPHSLAVSNPAT 60

Query: 61  ALGVGVGVGVIPLLTAGPCLGVEEENFFGNRS-NRGGGIQFQQSTQHYLKKTPSGSLDHV 120
           ALGVGVGVGVIPLLTAGPC+GVEEEN FGNRS NRGGGIQFQQSTQHYLKKTPSGSLDHV
Sbjct: 61  ALGVGVGVGVIPLLTAGPCVGVEEENLFGNRSSNRGGGIQFQQSTQHYLKKTPSGSLDHV 120

Query: 121 SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK 180
           SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK
Sbjct: 121 SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK 180

Query: 181 STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT 240
           STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT
Sbjct: 181 STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT 240

Query: 241 SSSHQDAGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV 300
           SSSHQD GNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV
Sbjct: 241 SSSHQDVGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV 300

Query: 301 EAGDGFPNVSELHLGDGGGGGGTMNNRNGSSSSPLVDPSDVYNTAGSGSGGVPGFLGGSN 360
           EAGDGFPNVSELHLGDG GGGGT+NNRNGSSSSPLVDPSDVYNTA SGSGGVPGFLGGSN
Sbjct: 301 EAGDGFPNVSELHLGDGVGGGGTINNRNGSSSSPLVDPSDVYNTAASGSGGVPGFLGGSN 360

[Close]

BLAST of CsGy6G023240 vs. ExPASy TrEMBL
Match: A0A1S3BMI2 (protein LATERAL ROOT PRIMORDIUM 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491474 PE=3 SV=1)

HSP 1 Score: 681 bits (1758), Expect = 1.13e-246
Identity = 352/361 (97.51%), Postives = 354/361 (98.06%), Query Frame = 0


Query: 1   MWSAAAQRSLNYGFGSEMGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNPAT 60
           MWSAAAQRSLNYG GSEMGMVGLRDVYVVAPASSFNQNP QHDVNLLSDPHSLAVSNPAT
Sbjct: 1   MWSAAAQRSLNYGLGSEMGMVGLRDVYVVAPASSFNQNPHQHDVNLLSDPHSLAVSNPAT 60

Query: 61  ALGVGVGVGVIPLLTAGPCLGVEEENFFGNRS-NRGGGIQFQQSTQHYLKKTPSGSLDHV 120
           ALGVGVGVGVIPLLTAGPC+GVEEEN FGNRS NRGGGIQFQQSTQHYLKKTPSGSLDHV
Sbjct: 61  ALGVGVGVGVIPLLTAGPCVGVEEENLFGNRSSNRGGGIQFQQSTQHYLKKTPSGSLDHV 120

Query: 121 SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK 180
           SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK
Sbjct: 121 SGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVK 180

Query: 181 STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT 240
           STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT
Sbjct: 181 STWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDT 240

Query: 241 SSSHQDAGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV 300
           SSSHQD GNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV
Sbjct: 241 SSSHQDVGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGV 300

Query: 301 EAGDGFPNVSELHLGDGGGGGGTMNNRNGSSSSPLVDPSDVYNTAGSGSGGVPGFLGGSN 360
           EAGDGFPNVSELHLGDG GGGGT+NNRNGSSSSPLVDPSDVYNTA SGSGGVPGFLGGSN
Sbjct: 301 EAGDGFPNVSELHLGDGVGGGGTINNRNGSSSSPLVDPSDVYNTAASGSGGVPGFLGGSN 360

[Close]

BLAST of CsGy6G023240 vs. TAIR 10
Match: AT5G12330.4 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 301.6 bits (771), Expect = 8.6e-82
Identity = 192/358 (53.63%), Postives = 230/358 (64.25%), Query Frame = 0


Query: 9   SLNYGFGS-----EMGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNPATALG 68
           S+ YG  S     EMGMVGLRDV++VAPA          +  ++S    +   N   A  
Sbjct: 74  SVRYGLPSSAAATEMGMVGLRDVFLVAPAY------HHQNAGVISGSDHM---NSNAAAA 133

Query: 69  VGVGVGVIPLLTAG-PCLGVEEE--NFFGNRSNRGGGIQFQQSTQHYLKKTPSGSLDHVS 128
             +GVGVIPLLTAG P   VE+   NF GN  NR            YL         H  
Sbjct: 134 AALGVGVIPLLTAGTPQQNVEDSDINFLGN--NRRWQNNNNNHETQYL---------HFK 193

Query: 129 GTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKS 188
            TN   +G     SG   S +S T TCQDCGNQAKK+C  RRCRTCC+SRGFDC+THVKS
Sbjct: 194 STNQTTVGTSSNNSGS-GSGASGTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKS 253

Query: 189 TWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPS------QTTSHTSTSNTTPP 248
           TWV AARRRERQ+M   A   A  S +++SG KKPR++ S      Q TSHTSTSN TPP
Sbjct: 254 TWVSAARRRERQVMPTGANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSN-TPP 313

Query: 249 RSLDTSSSHQD-AGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGF 308
           +S +TSSS QD  G++EA PGQ+RA AVFKCVRVTAV+DGDDEYAY A+VKIGGHVFKGF
Sbjct: 314 QSFETSSSRQDGGGSREAWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGF 373

Query: 309 LYDQGVEAGDGFPNVSELHLGDGGGGGGTMNNRNG-SSSSPLVDPSDVYNTAGSGSGG 351
           LYDQG+E  +GFP++S+LHL      GG+ NN NG S+S+P++DP +V    G GSGG
Sbjct: 374 LYDQGLEPKEGFPSMSDLHL------GGSANNHNGVSASAPILDPPNVVYGGGGGSGG 403

[Close]

BLAST of CsGy6G023240 vs. TAIR 10
Match: AT5G12330.2 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 298.1 bits (762), Expect = 9.5e-81
Identity = 187/344 (54.36%), Postives = 224/344 (65.12%), Query Frame = 0


Query: 18  MGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNPATALGVGVGVGVIPLLTAG 77
           MGMVGLRDV++VAPA          +  ++S    +   N   A    +GVGVIPLLTAG
Sbjct: 1   MGMVGLRDVFLVAPAY------HHQNAGVISGSDHM---NSNAAAAAALGVGVIPLLTAG 60

Query: 78  -PCLGVEEE--NFFGNRSNRGGGIQFQQSTQHYLKKTPSGSLDHVSGTNNELIGGGIGGS 137
            P   VE+   NF GN  NR            YL         H   TN   +G     S
Sbjct: 61  TPQQNVEDSDINFLGN--NRRWQNNNNNHETQYL---------HFKSTNQTTVGTSSNNS 120

Query: 138 GGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKSTWVPAARRRERQLM 197
           G   S +S T TCQDCGNQAKK+C  RRCRTCC+SRGFDC+THVKSTWV AARRRERQ+M
Sbjct: 121 GS-GSGASGTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM 180

Query: 198 AVTATAAADGSSASTSGAKKPRLIPS------QTTSHTSTSNTTPPRSLDTSSSHQD-AG 257
              A   A  S +++SG KKPR++ S      Q TSHTSTSN TPP+S +TSSS QD  G
Sbjct: 181 PTGANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSN-TPPQSFETSSSRQDGGG 240

Query: 258 NKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGVEAGDGFPN 317
           ++EA PGQ+RA AVFKCVRVTAV+DGDDEYAY A+VKIGGHVFKGFLYDQG+E  +GFP+
Sbjct: 241 SREAWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLEPKEGFPS 300

Query: 318 VSELHLGDGGGGGGTMNNRNG-SSSSPLVDPSDVYNTAGSGSGG 351
           +S+LHL      GG+ NN NG S+S+P++DP +V    G GSGG
Sbjct: 301 MSDLHL------GGSANNHNGVSASAPILDPPNVVYGGGGGSGG 316

[Close]

BLAST of CsGy6G023240 vs. TAIR 10
Match: AT5G12330.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 298.1 bits (762), Expect = 9.5e-81
Identity = 187/344 (54.36%), Postives = 224/344 (65.12%), Query Frame = 0


Query: 18  MGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNPATALGVGVGVGVIPLLTAG 77
           MGMVGLRDV++VAPA          +  ++S    +   N   A    +GVGVIPLLTAG
Sbjct: 1   MGMVGLRDVFLVAPAY------HHQNAGVISGSDHM---NSNAAAAAALGVGVIPLLTAG 60

Query: 78  -PCLGVEEE--NFFGNRSNRGGGIQFQQSTQHYLKKTPSGSLDHVSGTNNELIGGGIGGS 137
            P   VE+   NF GN  NR            YL         H   TN   +G     S
Sbjct: 61  TPQQNVEDSDINFLGN--NRRWQNNNNNHETQYL---------HFKSTNQTTVGTSSNNS 120

Query: 138 GGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKSTWVPAARRRERQLM 197
           G   S +S T TCQDCGNQAKK+C  RRCRTCC+SRGFDC+THVKSTWV AARRRERQ+M
Sbjct: 121 GS-GSGASGTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM 180

Query: 198 AVTATAAADGSSASTSGAKKPRLIPS------QTTSHTSTSNTTPPRSLDTSSSHQD-AG 257
              A   A  S +++SG KKPR++ S      Q TSHTSTSN TPP+S +TSSS QD  G
Sbjct: 181 PTGANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSN-TPPQSFETSSSRQDGGG 240

Query: 258 NKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGVEAGDGFPN 317
           ++EA PGQ+RA AVFKCVRVTAV+DGDDEYAY A+VKIGGHVFKGFLYDQG+E  +GFP+
Sbjct: 241 SREAWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLEPKEGFPS 300

Query: 318 VSELHLGDGGGGGGTMNNRNG-SSSSPLVDPSDVYNTAGSGSGG 351
           +S+LHL      GG+ NN NG S+S+P++DP +V    G GSGG
Sbjct: 301 MSDLHL------GGSANNHNGVSASAPILDPPNVVYGGGGGSGG 316

[Close]

BLAST of CsGy6G023240 vs. TAIR 10
Match: AT5G12330.3 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 167.9 bits (424), Expect = 1.5e-41
Identity = 117/236 (49.58%), Postives = 138/236 (58.47%), Query Frame = 0


Query: 18  MGMVGLRDVYVVAPASSFNQNPQQHDVNLLSDPHSLAVSNPATALGVGVGVGVIPLLTAG 77
           MGMVGLRDV++VAPA          +  ++S    +   N   A    +GVGVIPLLTAG
Sbjct: 1   MGMVGLRDVFLVAPAY------HHQNAGVISGSDHM---NSNAAAAAALGVGVIPLLTAG 60

Query: 78  -PCLGVEEE--NFFGNRSNRGGGIQFQQSTQHYLKKTPSGSLDHVSGTNNELIGGGIGGS 137
            P   VE+   NF GN  NR            YL         H   TN   +G     S
Sbjct: 61  TPQQNVEDSDINFLGN--NRRWQNNNNNHETQYL---------HFKSTNQTTVGTSSNNS 120

Query: 138 GGLASSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKSTWVPAARRRERQLM 197
           G   S +S T TCQDCGNQAKK+C  RRCRTCC+SRGFDC+THVKSTWV AARRRERQ+M
Sbjct: 121 GS-GSGASGTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM 180

Query: 198 AVTATAAADGSSASTSGAKKPRLIPS------QTTSHTSTSNTTPPRSLDTSSSHQ 245
              A   A  S +++SG KKPR++ S      Q TSHTSTSN TPP+S +TSSS Q
Sbjct: 181 PTGANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSN-TPPQSFETSSSRQ 214

[Close]

BLAST of CsGy6G023240 vs. TAIR 10
Match: AT4G36260.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 155.2 bits (391), Expect = 1.0e-37
Identity = 95/215 (44.19%), Postives = 125/215 (58.14%), Query Frame = 0


Query: 139 SSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKSTWVPAARRRERQLMAVTA 198
           SS S T +C+DCGNQAKKDC+H RCRTCC+SRGFDC+THV+STW+P ARRRERQ     +
Sbjct: 86  SSRSITISCRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMS 145

Query: 199 TAAADGSS----ASTSGAKKPRLIPSQTTSHTSTSNTTPPRSLDTSSSHQDAGNKEALPG 258
           T+   G S    A   G+  P+     T   TS+S+  P  S            + + PG
Sbjct: 146 TSGGGGGSGSGGAGGGGSSIPKRHRDPTLPGTSSSSRLPSHSAGLEM------GEASFPG 205

Query: 259 QIRAQAVFKCVRVTAVDD-GDDEYAYHAMVKIGGHVFKGFLYDQGVEAG--DGFPNVSEL 318
           ++ + A+F+CV+++ VDD GD +YAY   V IGGH+FKG LYDQG E+    G    S+ 
Sbjct: 206 EVSSDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPESSYMSGGSGGSDH 265

Query: 319 HLGDGGGGGG--------TMNNRNGSSSSPLVDPS 339
                GGGGG          +   G SS+  VDP+
Sbjct: 266 QSSSAGGGGGGHPFNPPVVTDGGGGVSSAMFVDPN 294

The following BLAST results are available for this feature:

BLAST of CsGy6G023240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94CK9	1.3e-79	54.36	Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 S...	[more]
O65517	1.4e-36	44.19	Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1	[more]
Q9SD40	5.9e-35	42.60	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]
Q9XGX0	1.2e-32	41.18	Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1	[more]
Q9FXH7	6.7e-31	40.74	Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1	[more]

BLAST of CsGy6G023240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657617.1	2.21e-258	100.00	protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN48103.1 hypothetical pro...	[more]
XP_008449658.1	5.54e-250	97.54	PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucumis melo]	[more]
KAA0061772.1	4.16e-249	97.54	protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucumis melo var. makuwa] >TY...	[more]
XP_008449660.1	5.53e-247	97.51	PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X3 [Cucumis melo]	[more]
XP_008449659.1	2.34e-246	97.51	PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X2 [Cucumis melo]	[more]

BLAST of CsGy6G023240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF01	1.07e-258	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G432270 PE=3 SV=1	[more]
A0A1S3BMJ0	2.68e-250	97.54	protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A5A7V0Q8	2.01e-249	97.54	Protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3BN66	2.68e-247	97.51	protein LATERAL ROOT PRIMORDIUM 1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A1S3BMI2	1.13e-246	97.51	protein LATERAL ROOT PRIMORDIUM 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]

BLAST of CsGy6G023240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12330.4	8.6e-82	53.63	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.2	9.5e-81	54.36	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.1	9.5e-81	54.36	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.3	1.5e-41	49.58	Lateral root primordium (LRP) protein-related	[more]
AT4G36260.1	1.0e-37	44.19	Lateral root primordium (LRP) protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 252..299 e-value: 5.5E-28 score: 94.6
None	No IPR available	PFAM	PF05142	DUF702	coord: 144..300 e-value: 7.9E-62 score: 208.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 322..343
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..343
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..248
None	No IPR available	PANTHER	PTHR31604:SF30	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 18..364
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 146..188 e-value: 4.4E-26 score: 88.5
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 18..364

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G023240.2	CsGy6G023240.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009851	auxin biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding