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CsGy6G022510 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAAAGCCCACAAAACTGATCGGGCCGCCGTAACCAGAACGATAATAATGGCGGGAAACAGATTCGAGGAGGCCGCCGGCACTCTTGACGCCGAAGAACCTTGAAGAAGAAGAAGACGGTGAGATATCGTTAAGGAAATAGAGAAAGATGGAGAAAAAAATAGGTGGCGGAAATGAAGAGCTTCCAAAGACTATAGTTCGTCGAGTGGTCAAAGAGAAGCTTTCTCAGTGCTCTCGTGACCAGGACATCTCCGTCAACAAAGATTCGCTTCTTGCGTTTTGCGAGAGCGCTCGAATCTTCATCCATTACCTCTCCGCTACGTAAGTTCCGCAATCTGCCTTAACATGTTTAGCTGTGAATGAAATTCTATCCATCCTGATGTTCGAAATTAGGGCTCGTTGTTTCTCTGATGTTTGCCTTTAAAACGAAAACGAAATAGATTCAAGCGATAAATCTATTGTTGTTATGGCGCTATGGTTAACGAAAATGTTGCTTTGTATTAGTTAATTCTTTTGTTTGTATTAACTGGTAGATTTCTAAGCAGGGCGAATGATATATGCAAGGAATCAAAGAGGCAGACGATTAAGGCGGAAGATGTATTGAAAGCTTTAGAAGATATGGAGTTTCCCGAATTGGTTAGGCCTCTCAAAGCCTCCCTCGACGGTGAGTAAGCTTCCTATCCCTGTGTTTAACCAATATATCCAGTTGCACTTTAGTTAAACACATGAATCTTATTTTCGATTAGGTTTTCTGCTTACCCTTTTTTCACTATTTGGTTTCCGAATGGTCTTTATGCATTTTCTCGATTTTCCTGCCTAAAAAAGCCTTGCATTGTTAGACGTTCAATCTCGACTTTAAACAAATTTCAGTAACACATCAGTAGAGTGGTTAAATAAATCCATATGCAAAGAGGATGCTGACATTATAAGACGAATCCTTATCATTTCAAATATACAAGATGAGTGAATTTGGCACCATGGCAAGGATAGGACAGGCGTTCAATGTTGGAAAAATCAAGTGACTTCACTTTCTCTATAAGATACATAAATTACTCTTCTCGTTGCCAATTATGTTTTCTTTTTTGTTTAGTTTTGCGGGAGGGGGTTTCCTCTGCCCTGCCCTTAGGCTGTTCTTTTGGTTCTTTTGATATTTATGTTTTTTTTAAATGAAAGTTCATAATATCTAAATCTAAAAGAGGCACCATCTCGAGGGACATCCTGGAACCTTTATTTTCTAATATTTAACAATGTAAAAGTGGATACATGGACACATTAGTATTTAATGCAAGTCTTAATGGCTGCCCTTAATCTTATATTACGCATGTAATATAAGAAGGTTGAATGAAATTCAACTCAGATTCCTTTCTTAGTTTTACTTCATTGAATTTTGATTCTGAGAGGAGCTGGCGAGCTCAAAGAACTAATGCATTCCTTTTATTAAAGGAGTATAGGATTTGATTAGATTGAATAAGCTCCTACAAAATAAATCTTCAAGTGTGTACAAATTCTTGGAAATTTTAGTTTGATGTCTTTTTATTTATCTGTATGTACAAATGCTATTGAGTATTGAGATATCGAGTTGCTTAAGCTTTGCTATGTTGCGATGAGTAAGAGATGGGATTTACTTTCTGGATTTCTTTTAGTACACACATAGTTAGAGCACTCCAAAGTGTCTGTAAAGTGAGCAAGAATATCTGTTTGCTAAGGTGTAAAACAAAACCTTGTTTATGGAATTCTGGAATAGTGGTATTTGACAACGTTTTTGTTTCGTAGTTGGATATTCGAGGATCGATATTGAGTCTGATCACACTTAACATTTTTGGATGGGGAGATGGATAAATTCTTGATGCTGCAATACAAGTTCCATGTGTAGATATTGTCTTACCCGTTGTTGTCATTGTTGCTTGCTTATTATTAGGCGAGGAATGAATTATAATGTCAAAGATAGTTTGTTTAAAATGTGAACGACTGCTGTACTGTGACTCGATTGTATGCAGACGACAATGCTAATCTCTGCCAGCTATGATTTTCAATCTCGTGTTTGCCAAATTCATGTTCACAATTATCCAATATTCGTTTTAAGATAAGCTAGCTGAACCTCTTTAATGATTTATTCATCATGCAACCTCTGTTTGGCTGAATACAGAATTCAGACGCAAGAATGCTGGAAAGAAGGCAGCTGCCTCCAGAGAAAAAGAAGCGAAAAAGAAGAGGAAGGTAGAAGAGCCAACAGTTGAAGGTACAGATGGTGAAAGTATAGAAGACGTTGGAAATGATGATAACGATGATAATGATGAAGACGAAGATGAAGATGAAAATAGAGCCAGTGATGACTGAGAAACATGATCTGTGTCTCTAGTTAGGTACTTGAAATGAGGTTACTCTACACTTGTACGTTATTTATTTTCAAATCAGAAAGAAACTATTTATGAGATTTTATACAAATCTTCTAGAAAAGGTTATCCTACACTTGCAGTTTGTATATTATGAACGGCAGCTTCACCTTTTAGCAAGTTCTATATCTCTTTGTTAGCATGGTTGGTTAAGAGAGTTTAAGGTTACGTCCACCCGTGAAAATGCAGTAGATCAATGGAGATAAAGAAAGTGGTCTCGTTTGATAACTTTTGGAGTTGTTTACATGTGTTGTGCAATTGTACTTAACACATGAAATTCATATTCTAATCTATAATGAAATAACGTGACAAAACCTATTTGTGATGAGTTAAGGGTGCTTAATTTAATTTTAACATTTTTTCTGCTATCATTACTGATGTTGATACTGCGTGACTTTTAGAAGTAGAGATAGCATAAACAATAGTAGTAAACCTTTTTATTCAACCCATTGAAAGATGGATTACTAATGTAATCATGGGTTAAATTACAAAAATGATATCTAAGCATGGAGTTGGCTCAATTATACTAAAGCTTGGTTCTACTTAAACCTTGGTAGTTTTTTTGGCTTTTGTTGAGAAATATACTTTGTACATGAACAAATTGAAACCAAAATTGCAATCTCTTGTTTTCAACTTTATGCCCTCAATTACACGCTTTTCTCTATGTCCTTAATTGTTAGATTTGTTCACTCAATTAATTTTTTCATCCATACATTCAAAAAAGGTCTTTAGGATAATTCTAACAGTTTAAACTTCAATAATATTCTCAATTGCTTGTAGTTAAACATCTTTAGCTCTACCTGGCCAATGCCAAATTGGTTCTAAAGTCAATTTTAAACGTACCCTTTTTACGCAAGGATGGAGCTATTACCATGTAAGCCAATACACATTCTCAAATTTGAGATCATTTTTACCACAGAAGAGATAAACGTATTTCTTGTTTAAAAGTAGGATGGAAAAAGAACAAAACCGGGGCAAAACACATTAATTAATTTGAAATGTAACCTAAAGTAAATATTGATAAAAACTAACAAACACATTACAAAGCCCATAAATTAGCTAGCTTCCACTTTTATCAATACTCAAGAATCTCTGGTCACGAGATGTTAGGTAGAGGGGGTGGCACCTCCGGCCGAAACCTTCTTGTTTGTTCCACGGCAGAACATTTGACAAGAACTAATATGGGCGATATCTGCGACCATGGCCACCGTGACCACCACCATGGCCACTGTCATGTGAATGTCTCCCCCTACTAGAACTGCCGCCGTTCTTACTGCCACTTCCGCCACCACTGCCTCCACTGCCGCCGCCACCACTTCTTGGATGTGGTGGAGGGGTTAGCATTTGTGATCCTGGTTGTTGCCTGCAAGAAGATAGGAAGCAGCTTTCAGCATGAGCCATCAGAGCAGAAGCTAAAGTATTAGATGCGGCAATTTACTCTAAGATGGATGGATTGTAGTTTTCAAATAGCTTCAACTAGAGAAATGAATTGGACAGAAGCTTCAAAACAAAAGGCAAACTGTATAAGCTAGAACTTCTTTAACAGAATTTACATCCCTAAGCTTCAGAAACTCTCGGGAGTAAAACGAATGAAAGAATTGTCCACTACAGTCAGGTATAATATAGGTGGAAAATGTAGAAAAAGAAGCACGAACTTACAAGACATAGCCAATCCGTCCAT GAAAAAAGCCCACAAAACTGATCGGGCCGCCGTAACCAGAACGATAATAATGGCGGGAAACAGATTCGAGGAGGCCGCCGGCACTCTTGACGCCGAAGAACCTTGAAGAAGAAGAAGACGGTGAGATATCGTTAAGGAAATAGAGAAAGATGGAGAAAAAAATAGGTGGCGGAAATGAAGAGCTTCCAAAGACTATAGTTCGTCGAGTGGTCAAAGAGAAGCTTTCTCAGTGCTCTCGTGACCAGGACATCTCCGTCAACAAAGATTCGCTTCTTGCGTTTTGCGAGAGCGCTCGAATCTTCATCCATTACCTCTCCGCTACGGCGAATGATATATGCAAGGAATCAAAGAGGCAGACGATTAAGGCGGAAGATGTATTGAAAGCTTTAGAAGATATGGAGTTTCCCGAATTGGTTAGGCCTCTCAAAGCCTCCCTCGACGAATTCAGACGCAAGAATGCTGGAAAGAAGGCAGCTGCCTCCAGAGAAAAAGAAGCGAAAAAGAAGAGGAAGGTAGAAGAGCCAACAGTTGAAGGTACAGATGGTGAAAGTATAGAAGACGTTGGAAATGATGATAACGATGATAATGATGAAGACGAAGATGAAGATGAAAATAGAGCCAGTGATGACTGAGAAACATGATCTGTGTCTCTAGTTAGGTACTTGAAATGAGGTTACTCTACACTTGTACGTTATTTATTTTCAAATCAGAAAGAAACTATTTATGAGATTTTATACAAATCTTCTAGAAAAGGTTATCCTACACTTGCAGTTTGTATATTATGAACGGCAGCTTCACCTTTTAGCAAGTTCTATATCTCTTTGTTAGCATGGTTGGTTAAGAGAGTTTAAGGTTACGTCCACCCGTGAAAATGCAGTAGATCAATGGAGATAAAGAAAGTGGTCTCGTTTGATAACTTTTGGAGTTGTTTACATGTGTTGTGCAATTGTACTTAACACATGAAATTCATATTCTAATCTATAATGAAATAACGTGACAAAACCTATTTGTGATGAGTTAAGGGTGCTTAATTTAATTTTAACATTTTTTCTGCTATCATTACTGATGTTGATACTGCGTGACTTTTAGAAGTAGAGATAGCATAAACAATAGTAGTAAACCTTTTTATTCAACCCATTGAAAGATGGATTACTAATGTAATCATGGGTTAAATTACAAAAATGATATCTAAGCATGGAGTTGGCTCAATTATACTAAAGCTTGGTTCTACTTAAACCTTGGTAGTTTTTTTGGCTTTTGTTGAGAAATATACTTTGTACATGAACAAATTGAAACCAAAATTGCAATCTCTTGTTTTCAACTTTATGCCCTCAATTACACGCTTTTCTCTATGTCCTTAATTGTTAGATTTGTTCACTCAATTAATTTTTTCATCCATACATTCAAAAAAGGTCTTTAGGATAATTCTAACAGTTTAAACTTCAATAATATTCTCAATTGCTTGTAGTTAAACATCTTTAGCTCTACCTGGCCAATGCCAAATTGGTTCTAAAGTCAATTTTAAACGTACCCTTTTTACGCAAGGATGGAGCTATTACCATGTAAGCCAATACACATTCTCAAATTTGAGATCATTTTTACCACAGAAGAGATAAACGTATTTCTTGTTTAAAAGTAGGATGGAAAAAGAACAAAACCGGGGCAAAACACATTAATTAATTTGAAATGTAACCTAAAGTAAATATTGATAAAAACTAACAAACACATTACAAAGCCCATAAATTAGCTAGCTTCCACTTTTATCAATACTCAAGAATCTCTGGTCACGAGATGTTAGGTAGAGGGGGTGGCACCTCCGGCCGAAACCTTCTTGTTTGTTCCACGGCAGAACATTTGACAAGAACTAATATGGGCGATATCTGCGACCATGGCCACCGTGACCACCACCATGGCCACTGTCATGTGAATGTCTCCCCCTACTAGAACTGCCGCCGTTCTTACTGCCACTTCCGCCACCACTGCCTCCACTGCCGCCGCCACCACTTCTTGGATGTGGTGGAGGGGTTAGCATTTGTGATCCTGGTTGTTGCCTGCAAGAAGATAGGAAGCAGCTTTCAGCATGAGCCATCAGAGCAGAAGCTAAAGTATTAGATGCGGCAATTTACTCTAAGATGGATGGATTGTAGTTTTCAAATAGCTTCAACTAGAGAAATGAATTGGACAGAAGCTTCAAAACAAAAGGCAAACTGTATAAGCTAGAACTTCTTTAACAGAATTTACATCCCTAAGCTTCAGAAACTCTCGGGAGTAAAACGAATGAAAGAATTGTCCACTACAGTCAGGTATAATATAGGTGGAAAATGTAGAAAAAGAAGCACGAACTTACAAGACATAGCCAATCCGTCCAT ATGGAGAAAAAAATAGGTGGCGGAAATGAAGAGCTTCCAAAGACTATAGTTCGTCGAGTGGTCAAAGAGAAGCTTTCTCAGTGCTCTCGTGACCAGGACATCTCCGTCAACAAAGATTCGCTTCTTGCGTTTTGCGAGAGCGCTCGAATCTTCATCCATTACCTCTCCGCTACGGCGAATGATATATGCAAGGAATCAAAGAGGCAGACGATTAAGGCGGAAGATGTATTGAAAGCTTTAGAAGATATGGAGTTTCCCGAATTGGTTAGGCCTCTCAAAGCCTCCCTCGACGAATTCAGACGCAAGAATGCTGGAAAGAAGGCAGCTGCCTCCAGAGAAAAAGAAGCGAAAAAGAAGAGGAAGGTAGAAGAGCCAACAGTTGAAGGTACAGATGGTGAAAGTATAGAAGACGTTGGAAATGATGATAACGATGATAATGATGAAGACGAAGATGAAGATGAAAATAGAGCCAGTGATGACTGA MEKKIGGGNEELPKTIVRRVVKEKLSQCSRDQDISVNKDSLLAFCESARIFIHYLSATANDICKESKRQTIKAEDVLKALEDMEFPELVRPLKASLDEFRRKNAGKKAAASREKEAKKKRKVEEPTVEGTDGESIEDVGNDDNDDNDEDEDEDENRASDD* Homology
BLAST of CsGy6G022510 vs. ExPASy Swiss-Prot
Match: Q9JKP7 (DNA polymerase epsilon subunit 3 OS=Mus musculus OX=10090 GN=Pole3 PE=1 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 9.0e-12 Identity = 46/139 (33.09%), Postives = 84/139 (60.43%), Query Frame = 0
BLAST of CsGy6G022510 vs. ExPASy Swiss-Prot
Match: Q3SZN5 (DNA polymerase epsilon subunit 3 OS=Bos taurus OX=9913 GN=POLE3 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.0e-11 Identity = 48/149 (32.21%), Postives = 88/149 (59.06%), Query Frame = 0
BLAST of CsGy6G022510 vs. ExPASy Swiss-Prot
Match: Q9NRF9 (DNA polymerase epsilon subunit 3 OS=Homo sapiens OX=9606 GN=POLE3 PE=1 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.0e-11 Identity = 48/149 (32.21%), Postives = 88/149 (59.06%), Query Frame = 0
BLAST of CsGy6G022510 vs. ExPASy Swiss-Prot
Match: Q5R4W3 (DNA polymerase epsilon subunit 3 OS=Pongo abelii OX=9601 GN=POLE3 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.0e-11 Identity = 48/149 (32.21%), Postives = 88/149 (59.06%), Query Frame = 0
BLAST of CsGy6G022510 vs. ExPASy Swiss-Prot
Match: Q642A5 (DNA polymerase epsilon subunit 3 OS=Rattus norvegicus OX=10116 GN=Pole3 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 7.6e-11 Identity = 47/149 (31.54%), Postives = 86/149 (57.72%), Query Frame = 0
BLAST of CsGy6G022510 vs. NCBI nr
Match: XP_004140162.1 (DNA polymerase epsilon subunit D [Cucumis sativus] >XP_031742448.1 DNA polymerase epsilon subunit D [Cucumis sativus] >KGN48033.1 hypothetical protein Csa_004222 [Cucumis sativus]) HSP 1 Score: 287 bits (735), Expect = 3.07e-97 Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of CsGy6G022510 vs. NCBI nr
Match: XP_008449581.1 (PREDICTED: DNA polymerase epsilon subunit D [Cucumis melo]) HSP 1 Score: 252 bits (644), Expect = 1.92e-83 Identity = 144/159 (90.57%), Postives = 147/159 (92.45%), Query Frame = 0
BLAST of CsGy6G022510 vs. NCBI nr
Match: XP_038900596.1 (DNA polymerase epsilon subunit 3 [Benincasa hispida] >XP_038900597.1 DNA polymerase epsilon subunit 3 [Benincasa hispida]) HSP 1 Score: 251 bits (641), Expect = 5.89e-83 Identity = 143/160 (89.38%), Postives = 149/160 (93.12%), Query Frame = 0
BLAST of CsGy6G022510 vs. NCBI nr
Match: XP_022995161.1 (DNA polymerase epsilon subunit 3 [Cucurbita maxima]) HSP 1 Score: 237 bits (604), Expect = 4.22e-77 Identity = 135/159 (84.91%), Postives = 147/159 (92.45%), Query Frame = 0
BLAST of CsGy6G022510 vs. NCBI nr
Match: XP_023533668.1 (DNA polymerase epsilon subunit 3 [Cucurbita pepo subsp. pepo] >XP_023533669.1 DNA polymerase epsilon subunit 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 236 bits (603), Expect = 4.74e-77 Identity = 136/157 (86.62%), Postives = 145/157 (92.36%), Query Frame = 0
BLAST of CsGy6G022510 vs. ExPASy TrEMBL
Match: A0A0A0KEV7 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G425700 PE=4 SV=1) HSP 1 Score: 287 bits (735), Expect = 1.49e-97 Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of CsGy6G022510 vs. ExPASy TrEMBL
Match: A0A1S3BNA4 (DNA polymerase epsilon subunit D OS=Cucumis melo OX=3656 GN=LOC103491421 PE=4 SV=1) HSP 1 Score: 252 bits (644), Expect = 9.31e-84 Identity = 144/159 (90.57%), Postives = 147/159 (92.45%), Query Frame = 0
BLAST of CsGy6G022510 vs. ExPASy TrEMBL
Match: A0A6J1K184 (DNA polymerase epsilon subunit 3 OS=Cucurbita maxima OX=3661 GN=LOC111490783 PE=4 SV=1) HSP 1 Score: 237 bits (604), Expect = 2.04e-77 Identity = 135/159 (84.91%), Postives = 147/159 (92.45%), Query Frame = 0
BLAST of CsGy6G022510 vs. ExPASy TrEMBL
Match: A0A6J1H495 (DNA polymerase epsilon subunit 3 OS=Cucurbita moschata OX=3662 GN=LOC111459853 PE=4 SV=1) HSP 1 Score: 235 bits (599), Expect = 9.33e-77 Identity = 137/157 (87.26%), Postives = 145/157 (92.36%), Query Frame = 0
BLAST of CsGy6G022510 vs. ExPASy TrEMBL
Match: A0A6J1DJA4 (DNA polymerase epsilon subunit 3 OS=Momordica charantia OX=3673 GN=LOC111020575 PE=4 SV=1) HSP 1 Score: 234 bits (598), Expect = 1.28e-76 Identity = 135/154 (87.66%), Postives = 143/154 (92.86%), Query Frame = 0
BLAST of CsGy6G022510 vs. TAIR 10
Match: AT2G27470.1 (nuclear factor Y, subunit B11 ) HSP 1 Score: 137.9 bits (346), Expect = 7.2e-33 Identity = 87/172 (50.58%), Postives = 118/172 (68.60%), Query Frame = 0
BLAST of CsGy6G022510 vs. TAIR 10
Match: AT5G23090.2 (nuclear factor Y, subunit B13 ) HSP 1 Score: 49.3 bits (116), Expect = 3.4e-06 Identity = 29/98 (29.59%), Postives = 54/98 (55.10%), Query Frame = 0
BLAST of CsGy6G022510 vs. TAIR 10
Match: AT5G23090.1 (nuclear factor Y, subunit B13 ) HSP 1 Score: 49.3 bits (116), Expect = 3.4e-06 Identity = 29/98 (29.59%), Postives = 54/98 (55.10%), Query Frame = 0
BLAST of CsGy6G022510 vs. TAIR 10
Match: AT5G08190.1 (nuclear factor Y, subunit B12 ) HSP 1 Score: 48.5 bits (114), Expect = 5.8e-06 Identity = 29/98 (29.59%), Postives = 54/98 (55.10%), Query Frame = 0
BLAST of CsGy6G022510 vs. TAIR 10
Match: AT5G08190.2 (nuclear factor Y, subunit B12 ) HSP 1 Score: 48.5 bits (114), Expect = 5.8e-06 Identity = 29/98 (29.59%), Postives = 54/98 (55.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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