CsGy6G021980 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTATCTCAACGAAATAATTGAGGTCAAAACCGACATTTTAATCATTAAAAAAATCTCATCTCTGTCTCACCTTTTCCTTCTTCACCTCCTCGCGCCAACCACCGATCACTTCTTCACTACAAAGACCTTCAACACTTTCCTCTATAAACCGCTACAGTTTCATTTTATCTCAGGCTTTTCGGTGATATTCTCATGGAGCAGCACGCCGGAAAACGTAGGCTCGACGTCCTTGCCGCTCACCTCTCTCCCGCCGGAGATATTTCTCCCGCACATGGCCACCTTCTCCCTGCGGTACTCCTCTGTTTATCGAACCCTTTTCTTTTCTGGGTGTAAACTGTAGATCGTATGATATTATTACTGAAATTTCCTGATACACGTTTGATCGATGTTTCTGGGTACCCATTTTTTCTGTTTGTGGAATTGGGGTTGTTTGATTGCTTAACATGTTTTGTGTTTTTTTTTCTTTCTTTCTTGGGGGTGATTAGAATTGCTGTAGCTATGGAAGTTCTGTCACTCGAAGGTGTGATAATAAGACGTACTTTGCAAGACAAGGATCTGAAGCTTGTGGTGCCTATATGAGGCAAGCTTCAACTACAGAGGTGATTGATTGATTGATGAATTTGAATTCACTGTGATAGTGATTCAACACTTCACATTTCTTTTAGAATTTTTAAGTTTCTTTTTCTGGAGATATGACTTTGTTCTCTTTCTCTGACCTTATTTGAAAGTGATCTTTCAGGGTAAGCAACGTTCTAATTCTCAGGCGTTTTCGGATGTCTCTGAAAGACCATTGTATTCAAGACCTGTAAAGGAAGAAAGGATTCTAAGTCAGAATTTCAATTTGATTGCATCTGAACCTCCCCTGTTTGCAAGGGCATGTTTGGGAATCAATGAACAAAATAACAATTTCATTCCGGAGACAAAACAACCGTCCTCTGGATCAAATGGTTGGTTATTGAGCTATATATATTGATGAATAGATAAAGCTAAATGTACCTCAGGCTCTTGGCCACATGATACTGAAGCAGAGATTGTACTCCTTTTTCTTCCTCTTTTAGCGTGAATTGAAAAGGGCTTAAATATTTAGTTCTATTTTTCATATTGTAACACAGGAATTGGTGGATTGTCTCCGAGGATGGATGTGGCAGAATCTACACGAGGTTATGTACTGACCGTGGAAATTCCAGGAGTCAAGATCAATGACATTATAGTTGAGGTCGATGACCAAAAGTAAGATAGTGATTTTGTAAAATTCTTTGAAATTTGTAGTTGAGAATATGATATTCAAATATTGTAGAAATTTAATAGTTAATCTTTCAAAATTTCCAAACTCAACTGCATACCCAACTCCCAAGTCTTTCTTGATTCCAATTTTAAAGTTGCGCTGACAAGCATTTGATATCTTAATTCCTATTAATTAGATCATCACTGGAACCAAGGTGGATTTCAATCTTTTCATTATGTTCTCAATAGTCTTCGCTTCATTCATGTTTGAATGTTAGTTACCATGAGGTGGTCTATATATGAACTTATAATATGAAATATAGGAATGCAAATGGTGTGGATTTGGGACAGAATGGTCTTATCATCCTCAACCTTGTGGGTCATTTTAATACCTTATCTTAAAAGTTAATACCATCCCTAACGAACATGAGATGATTACAAGCAAGGTTTTCTATTTGATGTCACGATAAATTACTACAGAATCCAACAACTAAAGTAAACTTAAATATGACTATACAATGTCATTGATCTGACAGTGGAAAGCTGTTGTCTGGCAGGTTGACTATAATCGGTAAACGCTCAAATCAGTACTGTGAAGTGGTAGGATACTCAAGCGACTCTATCTCTTCATATAACAAGAAAGAGATCTTACAAGGACCTTACCAGGTTGTGTGGCCACTTCCAATCAACATTAACAAGGACGGAGTATTAGCTGAGTTCTGGTAAGTAGCAACCTGCCAGTCCTTTGCAACGTTACGCCTGAATATCTTTCAACTTCAAGCTGTCCGTCCCAGTATTTTTACGAGGCTAATTATGCACATGTCCTTGCAATGCTGTTTCTTTTACCATTTGCTCGTGCACTTGTATTATACACAGGCAAACTGCTCACTTTCATACAGTTGTTTTTTATAGTTCACTCACTTGCTCGTTAATAACTCGGTGTTGATGTCTTCTTTTCATGTCAATGCAGGGACGGACTACTGCGGATTACTCTACCAAAAGTCTGAGTTGTTTTTCTCACAGGCAAACATATGTGAAGATATATGGTATGCTCCAAATTGCTCTCAACATAAACCGTCCAGTATCTTCGTATCCATACATCCCATATGTGAAACATCCAAAGACAGTTTATTCAATACATCTACAATATTCATATAAATCAATGTGGATTGCTGTCGAAATATATATCTGTATATGTATATCTTTTTTCTGTGACATATCTGGTTGTGCAATGTTGTTTTTGGAAATTCCTTTTGGCTATTGTTATGATGGTTTTTGTATTCGACCTGTAGCTGAAGTTGGCTTATGTTATATCATATTTTAGTTCCGATTTTCTTCTTTCCTTTCTCGTGTGCTTATGGGGAAATTGATAGAACCCTAATAAGCGATAACAAAACTACAAGATAAACCAAATAATTTGAGGATCTTCGACCTTCTCAATTTCTTGACATCAAATTCACTCACCAAAATATCCTCCTTTGCTCGTTCACTACTCTACTTACCATGGTAAGAACAGTACTCACATCAGAATGCTTTAATTTGTTAATTATTAGCATCTTAATGGAGTTTTCTCTAATATAATCCCAATGAAACCTTCTTACCATTTCCCATTAATTAGATTGTAAGTGTATATTAATACCAAATCCGAGGTGTTTCTAAATTAATATTTGTACATAAATTAGATATCAAGAACGCATTTCAGATGTATGGTCATCAATTTAATTTCATATATATCTCTTGTTACAAAGTTCGAATGTTTGGTGATCTCTTAAACTTTAACGAGTC ATTATCTCAACGAAATAATTGAGGTCAAAACCGACATTTTAATCATTAAAAAAATCTCATCTCTGTCTCACCTTTTCCTTCTTCACCTCCTCGCGCCAACCACCGATCACTTCTTCACTACAAAGACCTTCAACACTTTCCTCTATAAACCGCTACAGTTTCATTTTATCTCAGGCTTTTCGGTGATATTCTCATGGAGCAGCACGCCGGAAAACGTAGGCTCGACGTCCTTGCCGCTCACCTCTCTCCCGCCGGAGATATTTCTCCCGCACATGGCCACCTTCTCCCTGCGAATTGCTGTAGCTATGGAAGTTCTGTCACTCGAAGGTGTGATAATAAGACGTACTTTGCAAGACAAGGATCTGAAGCTTGTGGTGCCTATATGAGGCAAGCTTCAACTACAGAGGGTAAGCAACGTTCTAATTCTCAGGCGTTTTCGGATGTCTCTGAAAGACCATTGTATTCAAGACCTGTAAAGGAAGAAAGGATTCTAAGTCAGAATTTCAATTTGATTGCATCTGAACCTCCCCTGTTTGCAAGGGCATGTTTGGGAATCAATGAACAAAATAACAATTTCATTCCGGAGACAAAACAACCGTCCTCTGGATCAAATGGAATTGGTGGATTGTCTCCGAGGATGGATGTGGCAGAATCTACACGAGGTTATGTACTGACCGTGGAAATTCCAGGAGTCAAGATCAATGACATTATAGTTGAGGTCGATGACCAAAAGTTGACTATAATCGGTAAACGCTCAAATCAGTACTGTGAAGTGGTAGGATACTCAAGCGACTCTATCTCTTCATATAACAAGAAAGAGATCTTACAAGGACCTTACCAGGTTGTGTGGCCACTTCCAATCAACATTAACAAGGACGGAGTATTAGCTGAGTTCTGGGACGGACTACTGCGGATTACTCTACCAAAAGTCTGAGTTGTTTTTCTCACAGGCAAACATATGTGAAGATATATGGTATGCTCCAAATTGCTCTCAACATAAACCGTCCAGTATCTTCGTATCCATACATCCCATATGTGAAACATCCAAAGACAGTTTATTCAATACATCTACAATATTCATATAAATCAATGTGGATTGCTGTCGAAATATATATCTGTATATGTATATCTTTTTTCTGTGACATATCTGGTTGTGCAATGTTGTTTTTGGAAATTCCTTTTGGCTATTGTTATGATGGTTTTTGTATTCGACCTGTAGCTGAAGTTGGCTTATGTTATATCATATTTTAGTTCCGATTTTCTTCTTTCCTTTCTCGTGTGCTTATGGGGAAATTGATAGAACCCTAATAAGCGATAACAAAACTACAAGATAAACCAAATAATTTGAGGATCTTCGACCTTCTCAATTTCTTGACATCAAATTCACTCACCAAAATATCCTCCTTTGCTCGTTCACTACTCTACTTACCATGGTAAGAACAGTACTCACATCAGAATGCTTTAATTTGTTAATTATTAGCATCTTAATGGAGTTTTCTCTAATATAATCCCAATGAAACCTTCTTACCATTTCCCATTAATTAGATTGTAAGTGTATATTAATACCAAATCCGAGGTGTTTCTAAATTAATATTTGTACATAAATTAGATATCAAGAACGCATTTCAGATGTATGGTCATCAATTTAATTTCATATATATCTCTTGTTACAAAGTTCGAATGTTTGGTGATCTCTTAAACTTTAACGAGTC ATGGAGCAGCACGCCGGAAAACGTAGGCTCGACGTCCTTGCCGCTCACCTCTCTCCCGCCGGAGATATTTCTCCCGCACATGGCCACCTTCTCCCTGCGAATTGCTGTAGCTATGGAAGTTCTGTCACTCGAAGGTGTGATAATAAGACGTACTTTGCAAGACAAGGATCTGAAGCTTGTGGTGCCTATATGAGGCAAGCTTCAACTACAGAGGGTAAGCAACGTTCTAATTCTCAGGCGTTTTCGGATGTCTCTGAAAGACCATTGTATTCAAGACCTGTAAAGGAAGAAAGGATTCTAAGTCAGAATTTCAATTTGATTGCATCTGAACCTCCCCTGTTTGCAAGGGCATGTTTGGGAATCAATGAACAAAATAACAATTTCATTCCGGAGACAAAACAACCGTCCTCTGGATCAAATGGAATTGGTGGATTGTCTCCGAGGATGGATGTGGCAGAATCTACACGAGGTTATGTACTGACCGTGGAAATTCCAGGAGTCAAGATCAATGACATTATAGTTGAGGTCGATGACCAAAAGTTGACTATAATCGGTAAACGCTCAAATCAGTACTGTGAAGTGGTAGGATACTCAAGCGACTCTATCTCTTCATATAACAAGAAAGAGATCTTACAAGGACCTTACCAGGTTGTGTGGCCACTTCCAATCAACATTAACAAGGACGGAGTATTAGCTGAGTTCTGGGACGGACTACTGCGGATTACTCTACCAAAAGTCTGA MEQHAGKRRLDVLAAHLSPAGDISPAHGHLLPANCCSYGSSVTRRCDNKTYFARQGSEACGAYMRQASTTEGKQRSNSQAFSDVSERPLYSRPVKEERILSQNFNLIASEPPLFARACLGINEQNNNFIPETKQPSSGSNGIGGLSPRMDVAESTRGYVLTVEIPGVKINDIIVEVDDQKLTIIGKRSNQYCEVVGYSSDSISSYNKKEILQGPYQVVWPLPININKDGVLAEFWDGLLRITLPKV* Homology
BLAST of CsGy6G021980 vs. ExPASy Swiss-Prot
Match: Q4UKR8 (Small heat shock protein C2 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=hspC2 PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 9.5e-13 Identity = 38/101 (37.62%), Postives = 58/101 (57.43%), Query Frame = 0
BLAST of CsGy6G021980 vs. ExPASy Swiss-Prot
Match: Q4UJB1 (Small heat shock protein C4 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=hspc4-1 PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.4e-10 Identity = 43/128 (33.59%), Postives = 67/128 (52.34%), Query Frame = 0
BLAST of CsGy6G021980 vs. ExPASy Swiss-Prot
Match: O14368 (Heat shock protein 16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=hsp16 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.2e-08 Identity = 43/128 (33.59%), Postives = 64/128 (50.00%), Query Frame = 0
BLAST of CsGy6G021980 vs. ExPASy Swiss-Prot
Match: Q72QA1 (Probable 15 kDa heat shock protein OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) OX=267671 GN=hsp15 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.3e-06 Identity = 33/125 (26.40%), Postives = 61/125 (48.80%), Query Frame = 0
BLAST of CsGy6G021980 vs. ExPASy Swiss-Prot
Match: Q93TV7 (Probable 15 kDa heat shock protein OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) OX=189518 GN=hsp15 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.3e-06 Identity = 33/125 (26.40%), Postives = 61/125 (48.80%), Query Frame = 0
BLAST of CsGy6G021980 vs. NCBI nr
Match: XP_004140134.1 (uncharacterized protein LOC101211982 [Cucumis sativus] >KGN47982.1 hypothetical protein Csa_003433 [Cucumis sativus]) HSP 1 Score: 501 bits (1289), Expect = 7.40e-179 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
BLAST of CsGy6G021980 vs. NCBI nr
Match: XP_008449500.1 (PREDICTED: uncharacterized protein LOC103491368 [Cucumis melo] >KAA0061665.1 HSP27.8 [Cucumis melo var. makuwa] >TYK21140.1 HSP27.8 [Cucumis melo var. makuwa]) HSP 1 Score: 468 bits (1203), Expect = 9.58e-166 Identity = 229/246 (93.09%), Postives = 236/246 (95.93%), Query Frame = 0
BLAST of CsGy6G021980 vs. NCBI nr
Match: ADU55782.1 (HSP27.8 [Citrullus lanatus]) HSP 1 Score: 449 bits (1155), Expect = 2.65e-158 Identity = 223/254 (87.80%), Postives = 233/254 (91.73%), Query Frame = 0
BLAST of CsGy6G021980 vs. NCBI nr
Match: XP_038886846.1 (uncharacterized protein LOC120077066 [Benincasa hispida]) HSP 1 Score: 433 bits (1114), Expect = 4.06e-152 Identity = 219/254 (86.22%), Postives = 228/254 (89.76%), Query Frame = 0
BLAST of CsGy6G021980 vs. NCBI nr
Match: XP_022953065.1 (uncharacterized protein LOC111455581 isoform X2 [Cucurbita moschata]) HSP 1 Score: 427 bits (1097), Expect = 1.96e-149 Identity = 214/256 (83.59%), Postives = 227/256 (88.67%), Query Frame = 0
BLAST of CsGy6G021980 vs. ExPASy TrEMBL
Match: A0A0A0KHX3 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G421760 PE=3 SV=1) HSP 1 Score: 501 bits (1289), Expect = 3.59e-179 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
BLAST of CsGy6G021980 vs. ExPASy TrEMBL
Match: A0A5D3DCD9 (HSP27.8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00080 PE=3 SV=1) HSP 1 Score: 468 bits (1203), Expect = 4.64e-166 Identity = 229/246 (93.09%), Postives = 236/246 (95.93%), Query Frame = 0
BLAST of CsGy6G021980 vs. ExPASy TrEMBL
Match: A0A1S3BM59 (uncharacterized protein LOC103491368 OS=Cucumis melo OX=3656 GN=LOC103491368 PE=3 SV=1) HSP 1 Score: 468 bits (1203), Expect = 4.64e-166 Identity = 229/246 (93.09%), Postives = 236/246 (95.93%), Query Frame = 0
BLAST of CsGy6G021980 vs. ExPASy TrEMBL
Match: H6TB35 (HSP27.8 OS=Citrullus lanatus OX=3654 PE=2 SV=1) HSP 1 Score: 449 bits (1155), Expect = 1.28e-158 Identity = 223/254 (87.80%), Postives = 233/254 (91.73%), Query Frame = 0
BLAST of CsGy6G021980 vs. ExPASy TrEMBL
Match: A0A6J1GNM5 (uncharacterized protein LOC111455581 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455581 PE=3 SV=1) HSP 1 Score: 427 bits (1097), Expect = 9.51e-150 Identity = 214/256 (83.59%), Postives = 227/256 (88.67%), Query Frame = 0
BLAST of CsGy6G021980 vs. TAIR 10
Match: AT1G06460.1 (alpha-crystallin domain 32.1 ) HSP 1 Score: 151.8 bits (382), Expect = 7.4e-37 Identity = 98/282 (34.75%), Postives = 140/282 (49.65%), Query Frame = 0
BLAST of CsGy6G021980 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 54.7 bits (130), Expect = 1.2e-07 Identity = 35/117 (29.91%), Postives = 61/117 (52.14%), Query Frame = 0
BLAST of CsGy6G021980 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein ) HSP 1 Score: 52.0 bits (123), Expect = 8.0e-07 Identity = 34/118 (28.81%), Postives = 60/118 (50.85%), Query Frame = 0
BLAST of CsGy6G021980 vs. TAIR 10
Match: AT5G12030.1 (heat shock protein 17.6A ) HSP 1 Score: 50.8 bits (120), Expect = 1.8e-06 Identity = 28/98 (28.57%), Postives = 53/98 (54.08%), Query Frame = 0
BLAST of CsGy6G021980 vs. TAIR 10
Match: AT5G12020.1 (17.6 kDa class II heat shock protein ) HSP 1 Score: 49.7 bits (117), Expect = 4.0e-06 Identity = 30/98 (30.61%), Postives = 50/98 (51.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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