CsGy6G021960 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G021960
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	protein Mpv17
Location	Gy14Chr6: 22537500 .. 22541248 (-)
RNA-Seq Expression	CsGy6G021960
Synteny	CsGy6G021960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATATTTTTGAGTAGCAAAGTATTGATTGGGGTCACGTTTATCGATTAAAGGTTCGATGAGTTAGCTTAGTACACAAAAAAAACACATGCCTTGCCGCGGCACAAGAAAGCAGCCGGACTCTTCATCTCTGACGGTTAAATAGTTTCCTCCGTCCTCACATACTTGCTACCCTCTTTCCCTTTCCGGCATGGATGCTTTCAGCGGAGGCAATGGCGGCCTCTGGGCCTGGAACTTCCTCCTTTCTCATTCCAAATCTTCTCGTAACAACAAGAGAAGATCATTCGAGCCCAAATCCTCTAATTCCTTGGAAGCAACTGGTGGATCTGGTTTTCGTTTCCCTCTTAAGCAGTACATCACTGCAGGCTGTCTCACTCTCTCCGGCGACACTATCGCTCAGTTCATTGGCCGATATCGTAAAGGAATCGCTTTGAATTCCACTGCTCTCTCTGATTCTGCCTCTGCCGACAAGGTTAGCTTCCCTCTCTTTGGTTCTTCACTCCAATTGATTGTTTTCTTGTAATTTTGAATTTCGAATTGTTCTGTATTTGGTAACTTAGGGCATGCTTGGTTCTTTGTTCGTAATTTGTATTGTGCATGTTTGTGGTGTCTGCTCAAGTTTTCTGGGCCGCCACTGTCAATTTTACCTGTTTGGACTTGAATGGGCCAATTTTCTTGGACTGAACGGTGGAACTGGAACTGTTGCTATTAAATATATTTGTTTTTCATTCTGTCTATAGTAGATTTTTTTTTTTTTTTTTTTTTTGTGATGCATTTCTGATGTGGTCTCTAACCGTTTATTTTTCTTGGATCAAAATTCTTTTTCCAGATGAACATATTTTCAGAACATGATTGGATCCGGTCTTTGCGGATGGCTTCTTATGGATTTCTACTCTATGGTCCAGGATCCTTTGCATGGTACAACTATCTTGATCATGTTTTGCCTAAGAAATCGGTGGAGAATCTTATTCTTAAGGTACAGTTGATTGTGTGTTTAATTCTTATCTTAGTGTCTGAAGTTGAACATCAAGCATATACAACAAGTTCTATGAAATTTTTTCATAATTGTTTTTTCTTCAGGTTGTCTTGAACCAAATTGTTCTTGGTCCAGCAGTTATTGGTGTTGTATTTGCATGGAACAGTCTCTGGCTAGGAAAACTCTCCCAGCTTCCTGAAATGTACCGAAAAGATGCTCTTCCGACATTGTCATATGGTAAAAAAAAAAACGTCTCTGATTAGGGCCTTTTGTTGCCTAAGAACACAAGTGTAATGAAATCACTTTTTTTTTTTAATCTCTTTTGCAGGGGTTAGGTTCTGGATTCCTGTCAGCATATTGAATTTTTGGTAATTATTCTTATTTAGTTACCCCCATGTGGGTTCTCTTCCTATTACTCACGTTTTCATTATGAAAAATGGCTAACCTTAAAAAGATGGTCGTTTGTTCTAGTATTCTCTCTCATCTTTTGATAGACTTTTTGGATGTTGTTTTGTCTACTGCTTTTTCCGGAACAGGGCCTTCACTCAATTACATTGTCCAGAATTTTGTTAATATAGTTAACCTATAGTAAATGAGTCAAAACAGTAACACAATATCATCTTTTAAAAATCTGTGTATATAAGACAGACATCACTGATCTACAATGTTTCAAATCTTTGAACCACAAAATTATTCATCTGATCTCCTTCTGATGGGCCCGATGAACCTGGTATGTGTTCTATTCTCATGAAGAGTAAAAGCTTGAGGATTTGAGAGTGAGCCATTCTCTGTTTATAACTCTTGCAATTGCATGTTCGTGTTTTGAATTAGTGAGGACATTATCCTGAATTTGACCGAACCATTTGTGACATCTTACAGGGTCGTGCCACTCCAAGGTCGGGTGGCATTCATGTCTGTGGCCTCTATATTTTGGAACTTCTATTTGTCTTCAACCATGAGCAAGTGATTCAGTCTAGGAAAATTCTTAAGCTCCATGTGCAAGAGCAAGGCTGCACTTAGGAGATTTTACAATAAGTTGTGCGTTATGCCATTTATTATCTATAGTTCTAGTTATGAACTCAATTCCCAGTTAGCTGTGGTAGATCAGAAACACATTCAATAGCAAATGCTATCATTTCCAAATGCTTTTGCATTTAATGGATTGTGCTTCAGATCTACTAAACATAATTTTGTTTCCTAAATGTAGACAATAATTGCTTTGCTCTTGTTGAACAGCATTGCAAATATATTTCCTCTCTCCCTTTTTTACCTTCTTCCATCCCATTGTACCAATCTTCATTATCTGTAGTGATTGGATATTATTTTGATGTAATATTTTGGTTGTGAAGTTCTGTGTTAGTACTTCAATTTGAGGGCATTTTCTATCTATCAGCTTCAACACTAAGGTTTTCTTTTTGTCTTGGGATTAACATCTGACATCCTACCAAAAGCTTTTGCTGTTTAACTAGAACTGAATAATTAGATTGAATGTAGTAACATATATAACCAAAA

mRNA sequence

GATATTTTTGAGTAGCAAAGTATTGATTGGGGTCACGTTTATCGATTAAAGGTTCGATGAGTTAGCTTAGTACACAAAAAAAACACATGCCTTGCCGCGGCACAAGAAAGCAGCCGGACTCTTCATCTCTGACGGTTAAATAGTTTCCTCCGTCCTCACATACTTGCTACCCTCTTTCCCTTTCCGGCATGGATGCTTTCAGCGGAGGCAATGGCGGCCTCTGGGCCTGGAACTTCCTCCTTTCTCATTCCAAATCTTCTCGTAACAACAAGAGAAGATCATTCGAGCCCAAATCCTCTAATTCCTTGGAAGCAACTGGTGGATCTGGTTTTCGTTTCCCTCTTAAGCAGTACATCACTGCAGGCTGTCTCACTCTCTCCGGCGACACTATCGCTCAGTTCATTGGCCGATATCGTAAAGGAATCGCTTTGAATTCCACTGCTCTCTCTGATTCTGCCTCTGCCGACAAGATGAACATATTTTCAGAACATGATTGGATCCGGTCTTTGCGGATGGCTTCTTATGGATTTCTACTCTATGGTCCAGGATCCTTTGCATGGTACAACTATCTTGATCATGTTTTGCCTAAGAAATCGGTGGAGAATCTTATTCTTAAGGTTGTCTTGAACCAAATTGTTCTTGGTCCAGCAGTTATTGGTGTTGTATTTGCATGGAACAGTCTCTGGCTAGGAAAACTCTCCCAGCTTCCTGAAATGTACCGAAAAGATGCTCTTCCGACATTGTCATATGGGGTTAGGTTCTGGATTCCTGTCAGCATATTGAATTTTTGGGTCGTGCCACTCCAAGGTCGGGTGGCATTCATGTCTGTGGCCTCTATATTTTGGAACTTCTATTTGTCTTCAACCATGAGCAAGTGATTCAGTCTAGGAAAATTCTTAAGCTCCATGTGCAAGAGCAAGGCTGCACTTAGGAGATTTTACAATAAGTTGTGCGTTATGCCATTTATTATCTATAGTTCTAGTTATGAACTCAATTCCCAGTTAGCTGTGGTAGATCAGAAACACATTCAATAGCAAATGCTATCATTTCCAAATGCTTTTGCATTTAATGGATTGTGCTTCAGATCTACTAAACATAATTTTGTTTCCTAAATGTAGACAATAATTGCTTTGCTCTTGTTGAACAGCATTGCAAATATATTTCCTCTCTCCCTTTTTTACCTTCTTCCATCCCATTGTACCAATCTTCATTATCTGTAGTGATTGGATATTATTTTGATGTAATATTTTGGTTGTGAAGTTCTGTGTTAGTACTTCAATTTGAGGGCATTTTCTATCTATCAGCTTCAACACTAAGGTTTTCTTTTTGTCTTGGGATTAACATCTGACATCCTACCAAAAGCTTTTGCTGTTTAACTAGAACTGAATAATTAGATTGAATGTAGTAACATATATAACCAAAA

Coding sequence (CDS)

ATGGATGCTTTCAGCGGAGGCAATGGCGGCCTCTGGGCCTGGAACTTCCTCCTTTCTCATTCCAAATCTTCTCGTAACAACAAGAGAAGATCATTCGAGCCCAAATCCTCTAATTCCTTGGAAGCAACTGGTGGATCTGGTTTTCGTTTCCCTCTTAAGCAGTACATCACTGCAGGCTGTCTCACTCTCTCCGGCGACACTATCGCTCAGTTCATTGGCCGATATCGTAAAGGAATCGCTTTGAATTCCACTGCTCTCTCTGATTCTGCCTCTGCCGACAAGATGAACATATTTTCAGAACATGATTGGATCCGGTCTTTGCGGATGGCTTCTTATGGATTTCTACTCTATGGTCCAGGATCCTTTGCATGGTACAACTATCTTGATCATGTTTTGCCTAAGAAATCGGTGGAGAATCTTATTCTTAAGGTTGTCTTGAACCAAATTGTTCTTGGTCCAGCAGTTATTGGTGTTGTATTTGCATGGAACAGTCTCTGGCTAGGAAAACTCTCCCAGCTTCCTGAAATGTACCGAAAAGATGCTCTTCCGACATTGTCATATGGGGTTAGGTTCTGGATTCCTGTCAGCATATTGAATTTTTGGGTCGTGCCACTCCAAGGTCGGGTGGCATTCATGTCTGTGGCCTCTATATTTTGGAACTTCTATTTGTCTTCAACCATGAGCAAGTGA

Protein sequence

MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGCLTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPGSFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK*

Homology

[Close]

BLAST of CsGy6G021960 vs. ExPASy Swiss-Prot
Match: Q4P9K6 (Protein SYM1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=SYM1 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-13
Identity = 55/177 (31.07%), Postives = 80/177 (45.20%), Query Frame = 0


Query: 50  FPLKQYITAGCLTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRM 109
           FP +Q +T G L  +GDTIAQ +   R                      S HD  R+ R+
Sbjct: 15  FP-RQCLTGGVLFATGDTIAQQLVEKRG---------------------SRHDLARTFRL 74

Query: 110 ASYGFLLYGPGSFAWY-NYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWL- 169
           + YG  ++ P +  W+   L+ V       N+  KV L+Q +  PA + + F   ++   
Sbjct: 75  SLYGGCVFSPLASIWFGRVLERVRFSSKAANIATKVALDQAIASPAFVALFFGATTIMEG 134

Query: 170 GKLSQLPEMYRKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLS 225
           G   Q       +  PTL      WIPV  LN  +VP   R+ F++V SIFWN +LS
Sbjct: 135 GSPDQAKNKIIHNWWPTLKTAWGLWIPVQTLNMALVPPSQRLLFVNVVSIFWNTFLS 169

[Close]

BLAST of CsGy6G021960 vs. ExPASy Swiss-Prot
Match: Q54FR4 (PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.6e-12
Identity = 42/130 (32.31%), Postives = 68/130 (52.31%), Query Frame = 0


Query: 100 EHDWIRSLRMASYGFLLYGPGSFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVV 159
           ++D+ RS+RMA +GF + GP    W+ YLD   PKKS  +  +K+ ++Q+V  P    + 
Sbjct: 54  KYDFKRSMRMAVFGFAVTGPLFHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSPVFNFLF 113

Query: 160 FAWNSLWLGK-LSQLPEMYRKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIF 219
           F+   +  GK    + E  +KD L T       W  ++ +NF  +    RV FM+V +I 
Sbjct: 114 FSGMGILEGKSKDDIVEKLKKDWLTTYVSDCVVWPFINFVNFAYISSIHRVTFMNVCNIG 173

Query: 220 WNFYLSSTMS 229
           W  +L+   S
Sbjct: 174 WGAFLAKMNS 183

[Close]

BLAST of CsGy6G021960 vs. ExPASy Swiss-Prot
Match: Q7SCY7 (Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=sym-1 PE=3 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 7.5e-12
Identity = 43/128 (33.59%), Postives = 68/128 (53.12%), Query Frame = 0


Query: 99  SEHDWIRSLRMASYGFLLYGPGSFAWYNYLDH--VLPKKSVENLILKVVLNQIVLGPAVI 158
           S HD  R+ RM  YG  ++GP +  W+ +L    V+P  + + ++ +V  +Q +  P  I
Sbjct: 42  SNHDLTRTGRMVLYGGAVFGPAATTWFRFLQKRVVVPGSTNKTILARVAADQGLFAPTFI 101

Query: 159 GVVFAWNSLWLGKLSQLPEMYRKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVAS 218
           G+     ++  G  + + E  +K+    LS     W  V ++NF VVPL  RV F++V S
Sbjct: 102 GIFLGSMAVLEG--TDVKEKLQKNYWEALSTNWMVWPFVQMVNFKVVPLDHRVLFVNVIS 161

Query: 219 IFWNFYLS 225
           I WN YLS
Sbjct: 162 IGWNCYLS 167

[Close]

BLAST of CsGy6G021960 vs. ExPASy Swiss-Prot
Match: Q9NR77 (Peroxisomal membrane protein 2 OS=Homo sapiens OX=9606 GN=PXMP2 PE=1 SV=3)

HSP 1 Score: 70.5 bits (171), Expect = 2.9e-11
Identity = 53/175 (30.29%), Postives = 84/175 (48.00%), Query Frame = 0


Query: 52  LKQYITAGCLTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMAS 111
           L +  T+G L+  G+ +AQ I + RK    NS +L               D    LR A 
Sbjct: 35  LTKAATSGILSALGNFLAQMIEKKRK--KENSRSL---------------DVGGPLRYAV 94

Query: 112 YGFLLYGPGSFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGK-L 171
           YGF   GP S  +Y +++H +P +     + +++L+++V  PA + + F   +   GK  
Sbjct: 95  YGFFFTGPLSHFFYFFMEHWIPPEVPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDA 154

Query: 172 SQLPEMYRKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSS 226
           S      R    P L    R W P+  +N   VPL+ RV F ++A++FW  YL+S
Sbjct: 155 SAFAAKMRGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYLAS 192

[Close]

BLAST of CsGy6G021960 vs. ExPASy Swiss-Prot
Match: Q5TZ51 (Protein Mpv17 OS=Danio rerio OX=7955 GN=mpv17 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.7e-11
Identity = 48/177 (27.12%), Postives = 77/177 (43.50%), Query Frame = 0


Query: 54  QYITAGCLTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYG 113
           Q ITAG L   GD I+Q +   R+G+A                    H+  R+ +M S G
Sbjct: 20  QIITAGSLVGVGDVISQQLIE-RRGLA-------------------NHNARRTAKMMSIG 79

Query: 114 FLLYGPGSFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLG-KLSQ 173
           F   GP    WY  LD ++   +    + K++++Q+   P  +G          G  + +
Sbjct: 80  FFFVGPVVGGWYKVLDKLVTGGTKSAALKKMLVDQVGFAPCFLGAFLGITGTLNGLTVEE 139

Query: 174 LPEMYRKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 230
                ++D    L      W PV I NF+ +PL  R+A + + ++ WN YLS   +K
Sbjct: 140 NVAKLQRDYTDALISNYYLWPPVQIANFYFIPLHHRLAVVQIVAVVWNSYLSWKANK 176

[Close]

BLAST of CsGy6G021960 vs. NCBI nr
Match: XP_004140132.1 (protein sym-1 [Cucumis sativus])

HSP 1 Score: 461 bits (1187), Expect = 7.11e-164
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60
           MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC
Sbjct: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60

Query: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG
Sbjct: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD
Sbjct: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 229
           ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK
Sbjct: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 229

[Close]

BLAST of CsGy6G021960 vs. NCBI nr
Match: XP_008449492.1 (PREDICTED: protein sym-1 [Cucumis melo])

HSP 1 Score: 447 bits (1149), Expect = 4.43e-158
Identity = 219/229 (95.63%), Postives = 223/229 (97.38%), Query Frame = 0


Query: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60
           MDA SGGNGGLW WNFLL HSKSSRNNKRRSFEPKSSNSLEATGGSGFRFP+KQY+TAGC
Sbjct: 1   MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC 60

Query: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQF  RYRKGIALNST+LSDSASADKMNIF EHDWIRSLRMASYGFLLYGPG
Sbjct: 61  LTLSGDTIAQFFSRYRKGIALNSTSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHVLPKKSVENLILKV+LNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD
Sbjct: 121 SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 229
           ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK
Sbjct: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 229

[Close]

BLAST of CsGy6G021960 vs. NCBI nr
Match: XP_038887313.1 (protein SYM1 [Benincasa hispida])

HSP 1 Score: 416 bits (1068), Expect = 9.51e-146
Identity = 205/229 (89.52%), Postives = 215/229 (93.89%), Query Frame = 0


Query: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60
           MD   GGNGGLW WNFLL  SK+SRN KRR F+PK SNSL+ATGGSGFR PLKQY+TAGC
Sbjct: 1   MDVLGGGNGGLWGWNFLLPDSKTSRN-KRRRFDPKCSNSLQATGGSGFRLPLKQYLTAGC 60

Query: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQFI R+R+GIALNST+LSDS SA KMNIFSEHDWIRSLRMASYGFLLYGPG
Sbjct: 61  LTLSGDTIAQFISRWREGIALNSTSLSDSDSAHKMNIFSEHDWIRSLRMASYGFLLYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWY YLDHVLPKKSVENLILKV+LNQIVLGPAVIGVVFAWNSLWLGK+SQLP+MYRKD
Sbjct: 121 SFAWYGYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKISQLPDMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 229
           ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK
Sbjct: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 228

[Close]

BLAST of CsGy6G021960 vs. NCBI nr
Match: KAE8647344.1 (hypothetical protein Csa_003113 [Cucumis sativus])

HSP 1 Score: 407 bits (1045), Expect = 1.16e-142
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60
           MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC
Sbjct: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60

Query: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG
Sbjct: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD
Sbjct: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFW 201
           ALPTLSYGVRFWIPVSILNFW
Sbjct: 181 ALPTLSYGVRFWIPVSILNFW 201

[Close]

BLAST of CsGy6G021960 vs. NCBI nr
Match: KAA0061662.1 (protein sym-1 [Cucumis melo var. makuwa] >TYK21137.1 protein sym-1 [Cucumis melo var. makuwa])

HSP 1 Score: 394 bits (1011), Expect = 4.44e-135
Identity = 197/224 (87.95%), Postives = 201/224 (89.73%), Query Frame = 0


Query: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60
           MDA SGGNGGLW WNFLL HSKSSRNNKRRSFEPKSSNSLEATGGSGFRFP+KQY+TAGC
Sbjct: 1   MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC 60

Query: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQF  RYRKGIALNST+LSDSASADKMNIF EHDWIRSLRMASYGFLLYGPG
Sbjct: 61  LTLSGDTIAQFFSRYRKGIALNSTSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHVLPKKSVENLILKV+LNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD
Sbjct: 121 SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFW----------------VVPLQGR 208
           ALPTLSYGVRFWIPVSILNFW                VVPLQ R
Sbjct: 181 ALPTLSYGVRFWIPVSILNFWEDMILNLTKPFVTSYRVVPLQDR 224

[Close]

BLAST of CsGy6G021960 vs. ExPASy TrEMBL
Match: A0A0A0KEM8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421720 PE=3 SV=1)

HSP 1 Score: 461 bits (1187), Expect = 3.44e-164
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60
           MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC
Sbjct: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60

Query: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG
Sbjct: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD
Sbjct: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 229
           ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK
Sbjct: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 229

[Close]

BLAST of CsGy6G021960 vs. ExPASy TrEMBL
Match: A0A1S3BLI4 (protein sym-1 OS=Cucumis melo OX=3656 GN=LOC103491365 PE=3 SV=1)

HSP 1 Score: 447 bits (1149), Expect = 2.14e-158
Identity = 219/229 (95.63%), Postives = 223/229 (97.38%), Query Frame = 0


Query: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60
           MDA SGGNGGLW WNFLL HSKSSRNNKRRSFEPKSSNSLEATGGSGFRFP+KQY+TAGC
Sbjct: 1   MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC 60

Query: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQF  RYRKGIALNST+LSDSASADKMNIF EHDWIRSLRMASYGFLLYGPG
Sbjct: 61  LTLSGDTIAQFFSRYRKGIALNSTSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHVLPKKSVENLILKV+LNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD
Sbjct: 121 SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 229
           ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK
Sbjct: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 229

[Close]

BLAST of CsGy6G021960 vs. ExPASy TrEMBL
Match: A0A5D3DBV3 (Protein sym-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00040 PE=3 SV=1)

HSP 1 Score: 394 bits (1011), Expect = 2.15e-135
Identity = 197/224 (87.95%), Postives = 201/224 (89.73%), Query Frame = 0


Query: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60
           MDA SGGNGGLW WNFLL HSKSSRNNKRRSFEPKSSNSLEATGGSGFRFP+KQY+TAGC
Sbjct: 1   MDALSGGNGGLWGWNFLLPHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPIKQYVTAGC 60

Query: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQF  RYRKGIALNST+LSDSASADKMNIF EHDWIRSLRMASYGFLLYGPG
Sbjct: 61  LTLSGDTIAQFFSRYRKGIALNSTSLSDSASADKMNIFLEHDWIRSLRMASYGFLLYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHVLPKKSVENLILKV+LNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD
Sbjct: 121 SFAWYNYLDHVLPKKSVENLILKVILNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFW----------------VVPLQGR 208
           ALPTLSYGVRFWIPVSILNFW                VVPLQ R
Sbjct: 181 ALPTLSYGVRFWIPVSILNFWEDMILNLTKPFVTSYRVVPLQDR 224

[Close]

BLAST of CsGy6G021960 vs. ExPASy TrEMBL
Match: A0A6J1D1H6 (protein Mpv17 OS=Momordica charantia OX=3673 GN=LOC111016738 PE=3 SV=1)

HSP 1 Score: 371 bits (952), Expect = 2.52e-128
Identity = 186/233 (79.83%), Postives = 203/233 (87.12%), Query Frame = 0


Query: 1   MDAFSGGN-GGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAG 60
           MD   GG+ GGLW WNFLL   K+SRN KRR FEPKSSNSLEAT GSGFRFPLKQ + AG
Sbjct: 1   MDLLGGGSHGGLWGWNFLLPDPKTSRN-KRRRFEPKSSNSLEATPGSGFRFPLKQSLIAG 60

Query: 61  CLTLSGDTIAQFIGRYRKGIALNSTALSDSASADK---MNIFSEHDWIRSLRMASYGFLL 120
           CL+LSGDTIAQFIGR+RKGIALNST+LS+SAS  +    NIFSEHDWIR+LRM SYGFLL
Sbjct: 61  CLSLSGDTIAQFIGRWRKGIALNSTSLSNSASLSRDGFSNIFSEHDWIRALRMLSYGFLL 120

Query: 121 YGPGSFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEM 180
           YGPGSFAWYNYLDH LPK+SVENL+LKV+LNQ+VLGP VI VVFAWN++WLGK+SQLP+ 
Sbjct: 121 YGPGSFAWYNYLDHALPKRSVENLMLKVLLNQVVLGPCVIAVVFAWNNIWLGKISQLPDK 180

Query: 181 YRKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 229
           YRKDALPTL YG RFWIPV ILNFW VPLQ RV FMSVASIFWNFYLSSTMSK
Sbjct: 181 YRKDALPTLLYGFRFWIPVXILNFWAVPLQARVPFMSVASIFWNFYLSSTMSK 232

[Close]

BLAST of CsGy6G021960 vs. ExPASy TrEMBL
Match: A0A6J1EWS4 (protein Mpv17 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437238 PE=3 SV=1)

HSP 1 Score: 365 bits (936), Expect = 5.37e-126
Identity = 180/229 (78.60%), Postives = 199/229 (86.90%), Query Frame = 0


Query: 1   MDAFSGGNGGLWAWNFLLSHSKSSRNNKRRSFEPKSSNSLEATGGSGFRFPLKQYITAGC 60
           MD   GG+GGLW WNF L  S +SRN KRRSFE KSSNSL+ATGGSG++FPLKQ +TAGC
Sbjct: 1   MDLLGGGHGGLWGWNFFLPDSNTSRN-KRRSFEAKSSNSLQATGGSGYQFPLKQSLTAGC 60

Query: 61  LTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLLYGPG 120
           LTLSGDTIAQ +GR+RK IALNS++L     +   NIFSEHDWIRSLRM SYG L+YGPG
Sbjct: 61  LTLSGDTIAQLVGRWRKEIALNSSSLEKDGVS---NIFSEHDWIRSLRMLSYGILIYGPG 120

Query: 121 SFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEMYRKD 180
           SFAWYNYLDHV+PK+SV NL+LKV+LNQIVLGP VIG VFAWN++WLGK+SQLP MYRKD
Sbjct: 121 SFAWYNYLDHVMPKQSVGNLMLKVLLNQIVLGPCVIGAVFAWNNIWLGKISQLPAMYRKD 180

Query: 181 ALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 229
           ALPTL YG RFWIPVSILNFWVVPLQ RVAFMSVASIFWNFYLSSTMSK
Sbjct: 181 ALPTLLYGFRFWIPVSILNFWVVPLQARVAFMSVASIFWNFYLSSTMSK 225

[Close]

BLAST of CsGy6G021960 vs. TAIR 10
Match: AT2G42770.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 292.0 bits (746), Expect = 4.3e-79
Identity = 144/233 (61.80%), Postives = 177/233 (75.97%), Query Frame = 0


Query: 1   MDAFS--GGNGGLWAWN-FLLSHSKSSRNNKRRSFEPKSSNSLEAT-GGSGFRFPLKQYI 60
           MDA    GG GG W WN F     K S  ++ +     SS+S++ +    G+RFPLKQ +
Sbjct: 1   MDALGGCGGAGGFWGWNGFDQRRKKKSSGDRGKKRNSGSSDSVDVSRDAGGYRFPLKQAV 60

Query: 61  TAGCLTLSGDTIAQFIGRYRKGIALNSTALSDSASADKMNIFSEHDWIRSLRMASYGFLL 120
           TAG LT +GDTIAQ  GR++K  AL  ++ S+    +  NIFSEHDWIR+LRM+SYGFLL
Sbjct: 61  TAGALTFTGDTIAQLSGRWKKRTALKQSS-SELDEGELWNIFSEHDWIRALRMSSYGFLL 120

Query: 121 YGPGSFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFAWNSLWLGKLSQLPEM 180
           YGPGS+AWY +LDH LPK +  NL+LKV+LNQ++LGP+VI V+FAWN+LWLGKLS+L   
Sbjct: 121 YGPGSYAWYQFLDHSLPKPTATNLVLKVLLNQVILGPSVIAVIFAWNNLWLGKLSELGNK 180

Query: 181 YRKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWNFYLSSTMSK 230
           Y+KDALPTL YG RFW+PVSILNFWVVPLQ RVAFMS+ S+FWNFYLSSTMSK
Sbjct: 181 YQKDALPTLLYGFRFWVPVSILNFWVVPLQARVAFMSMGSVFWNFYLSSTMSK 232

[Close]

BLAST of CsGy6G021960 vs. TAIR 10
Match: AT5G43140.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein )

HSP 1 Score: 81.6 bits (200), Expect = 8.8e-16
Identity = 39/124 (31.45%), Postives = 67/124 (54.03%), Query Frame = 0


Query: 102 DWIRSLRMASYGFLLYGPGSFAWYNYLDHVLPKKSVENLILKVVLNQIVLGPAVIGVVFA 161
           D IR+ RMAS+G +  GP    W++YL  +LPK+ V     K+++ Q++ GP    V ++
Sbjct: 121 DLIRTARMASFGLIFLGPSQHLWFSYLSKILPKRDVLTTFKKIMMGQVLFGPVSNTVFYS 180

Query: 162 WNSLWLGKLS-QLPEMYRKDALPTLSYGVRFWIPVSILNFWVVPLQGRVAFMSVASIFWN 221
           +N+   G+ S ++    ++D LPTL  G+ +W     + F  VP+  +    S  +  W 
Sbjct: 181 YNAALQGENSEEIVARLKRDLLPTLKNGLMYWPVCDFVTFKYVPVHLQPLMNSSCAYIWT 240

Query: 222 FYLS 225
            YL+
Sbjct: 241 IYLT 244

The following BLAST results are available for this feature:

BLAST of CsGy6G021960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4P9K6	1.0e-13	31.07	Protein SYM1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=SYM1 PE=3 ...	[more]
Q54FR4	2.6e-12	32.31	PXMP2/4 family protein 4 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290631 PE...	[more]
Q7SCY7	7.5e-12	33.59	Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 ...	[more]
Q9NR77	2.9e-11	30.29	Peroxisomal membrane protein 2 OS=Homo sapiens OX=9606 GN=PXMP2 PE=1 SV=3	[more]
Q5TZ51	3.7e-11	27.12	Protein Mpv17 OS=Danio rerio OX=7955 GN=mpv17 PE=2 SV=1	[more]

BLAST of CsGy6G021960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140132.1	7.11e-164	100.00	protein sym-1 [Cucumis sativus]	[more]
XP_008449492.1	4.43e-158	95.63	PREDICTED: protein sym-1 [Cucumis melo]	[more]
XP_038887313.1	9.51e-146	89.52	protein SYM1 [Benincasa hispida]	[more]
KAE8647344.1	1.16e-142	100.00	hypothetical protein Csa_003113 [Cucumis sativus]	[more]
KAA0061662.1	4.44e-135	87.95	protein sym-1 [Cucumis melo var. makuwa] >TYK21137.1 protein sym-1 [Cucumis melo...	[more]

BLAST of CsGy6G021960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEM8	3.44e-164	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421720 PE=3 SV=1	[more]
A0A1S3BLI4	2.14e-158	95.63	protein sym-1 OS=Cucumis melo OX=3656 GN=LOC103491365 PE=3 SV=1	[more]
A0A5D3DBV3	2.15e-135	87.95	Protein sym-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G0004...	[more]
A0A6J1D1H6	2.52e-128	79.83	protein Mpv17 OS=Momordica charantia OX=3673 GN=LOC111016738 PE=3 SV=1	[more]
A0A6J1EWS4	5.37e-126	78.60	protein Mpv17 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437238 PE=3 SV=1	[more]

BLAST of CsGy6G021960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42770.1	4.3e-79	61.80	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]
AT5G43140.1	8.8e-16	31.45	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007248	Mpv17/PMP22	PFAM	PF04117	Mpv17_PMP22	coord: 170..224 e-value: 1.8E-14 score: 53.6
IPR007248	Mpv17/PMP22	PANTHER	PTHR11266	PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17	coord: 1..229
None	No IPR available	PANTHER	PTHR11266:SF91	EXPRESSED PROTEIN	coord: 1..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G021960.2	CsGy6G021960.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane