CsGy6G020990 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G020990
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	histone H1
Location	Gy14Chr6: 21639428 .. 21640346 (-)
RNA-Seq Expression	CsGy6G020990
Synteny	CsGy6G020990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTGAGGAACCGGTGGTGCCGGTGGAGTCTGCGGCAGAGCCGACTAACGCCGAACAAGCGGAAGAAAATCCGGCGAACAAGTCTGGCAGGTCTAAGAAGTCGAAAGAACCTAAAGACAAGAAACCTGCTGCTCCTAGAAAACCAAGAAATCCTCCAACTCATCCTCCATATGAAGAGGTGTGTTGCTGATTCAAATTCGAATTTTCTTTTGAATTTAATGTTTCGTGTATTGGATCTGTTTTGTTGATTTGGTTTGATGTTTTGATTTCAGATGATTAAGGATGCGATTGTTACGTTGAAGGAAAGAACTGGTTCGAGTCAGTATGCGATCACTAAGTTTATTGAAGAGAAGCAAAAGCAACTTCCACCGAACTTTAAGAAGCTTTTGTTATTCCATTTGAAGAAACTTGTGACTTCCGGGAAGTTGGTGAAGGTTAAGAGTTCGTTCAAGCTTAAACCGGCGAAGTCGGCAGTTGTGAAACCTGCTTCTCCTGCGAAGAAGAAGCCTGTAGCTGCTAAGCCGAAGTCTAAACCCGTAGCTAAGCCCAAAGCTGTTGCAAAATCTCCTGCGAAGCCGAAGGCTGCTGCAAAGCCGAAGCCTAAGGCGACTCCCAAGCCCAAAGCTGCTCCTAAACCCAAAGCTGCTCCAGCCAAGTCGAAGAGCAGTGCTGTGGCGAAGCCCAAAGCTGCGGCAAAGACTAAAGCCGCTCCCAAGCCGAAAGCTAAGGAAAAGCCAGCGAAGGCTGCAAGAACTTCGACGAGAACCTCACCAGGAAGGAAGGCACCAGCTCCAAAACCGGTAGTGAAGAAGGCACCGGCGGCCAAGAAGGCTCCATCGAAAAGTGTTAAAGCTAAAAAAGTGAAATCGCTGGCGAAAAAGTCTCCGGCTAAAAGAGGGAGTAAAGGGAGGTAG

mRNA sequence

ATGGCTACTGAGGAACCGGTGGTGCCGGTGGAGTCTGCGGCAGAGCCGACTAACGCCGAACAAGCGGAAGAAAATCCGGCGAACAAGTCTGGCAGGTCTAAGAAGTCGAAAGAACCTAAAGACAAGAAACCTGCTGCTCCTAGAAAACCAAGAAATCCTCCAACTCATCCTCCATATGAAGAGATGATTAAGGATGCGATTGTTACGTTGAAGGAAAGAACTGGTTCGAGTCAGTATGCGATCACTAAGTTTATTGAAGAGAAGCAAAAGCAACTTCCACCGAACTTTAAGAAGCTTTTGTTATTCCATTTGAAGAAACTTGTGACTTCCGGGAAGTTGGTGAAGGTTAAGAGTTCGTTCAAGCTTAAACCGGCGAAGTCGGCAGTTGTGAAACCTGCTTCTCCTGCGAAGAAGAAGCCTGTAGCTGCTAAGCCGAAGTCTAAACCCGTAGCTAAGCCCAAAGCTGTTGCAAAATCTCCTGCGAAGCCGAAGGCTGCTGCAAAGCCGAAGCCTAAGGCGACTCCCAAGCCCAAAGCTGCTCCTAAACCCAAAGCTGCTCCAGCCAAGTCGAAGAGCAGTGCTGTGGCGAAGCCCAAAGCTGCGGCAAAGACTAAAGCCGCTCCCAAGCCGAAAGCTAAGGAAAAGCCAGCGAAGGCTGCAAGAACTTCGACGAGAACCTCACCAGGAAGGAAGGCACCAGCTCCAAAACCGGTAGTGAAGAAGGCACCGGCGGCCAAGAAGGCTCCATCGAAAAGTGTTAAAGCTAAAAAAGTGAAATCGCTGGCGAAAAAGTCTCCGGCTAAAAGAGGGAGTAAAGGGAGGTAG

Coding sequence (CDS)

ATGGCTACTGAGGAACCGGTGGTGCCGGTGGAGTCTGCGGCAGAGCCGACTAACGCCGAACAAGCGGAAGAAAATCCGGCGAACAAGTCTGGCAGGTCTAAGAAGTCGAAAGAACCTAAAGACAAGAAACCTGCTGCTCCTAGAAAACCAAGAAATCCTCCAACTCATCCTCCATATGAAGAGATGATTAAGGATGCGATTGTTACGTTGAAGGAAAGAACTGGTTCGAGTCAGTATGCGATCACTAAGTTTATTGAAGAGAAGCAAAAGCAACTTCCACCGAACTTTAAGAAGCTTTTGTTATTCCATTTGAAGAAACTTGTGACTTCCGGGAAGTTGGTGAAGGTTAAGAGTTCGTTCAAGCTTAAACCGGCGAAGTCGGCAGTTGTGAAACCTGCTTCTCCTGCGAAGAAGAAGCCTGTAGCTGCTAAGCCGAAGTCTAAACCCGTAGCTAAGCCCAAAGCTGTTGCAAAATCTCCTGCGAAGCCGAAGGCTGCTGCAAAGCCGAAGCCTAAGGCGACTCCCAAGCCCAAAGCTGCTCCTAAACCCAAAGCTGCTCCAGCCAAGTCGAAGAGCAGTGCTGTGGCGAAGCCCAAAGCTGCGGCAAAGACTAAAGCCGCTCCCAAGCCGAAAGCTAAGGAAAAGCCAGCGAAGGCTGCAAGAACTTCGACGAGAACCTCACCAGGAAGGAAGGCACCAGCTCCAAAACCGGTAGTGAAGAAGGCACCGGCGGCCAAGAAGGCTCCATCGAAAAGTGTTAAAGCTAAAAAAGTGAAATCGCTGGCGAAAAAGTCTCCGGCTAAAAGAGGGAGTAAAGGGAGGTAG

Protein sequence

MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSFKLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAAPKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVKKAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSKGR*

Homology

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BLAST of CsGy6G020990 vs. ExPASy Swiss-Prot
Match: P37218 (Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.5e-48
Identity = 177/299 (59.20%), Postives = 191/299 (63.88%), Query Frame = 0


Query: 1   MATEEPVV---PVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHP 60
           MATEEPV+    VE  A P   +  E NP  KSG++K  KE K KKPAAPRK    PTHP
Sbjct: 1   MATEEPVIVNEVVEEQAAPETVKD-EANPPAKSGKAK--KETKAKKPAAPRKRSATPTHP 60

Query: 61  PYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVK 120
           PY EMIKDAIVTLKERTGSSQ+AITKFIEEKQK LP NFKKLLL  LKK V S KLVKVK
Sbjct: 61  PYFEMIKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKLVKVK 120

Query: 121 SSFKLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKP 180
           +S+KL P+ S     A PAKKKP AA  KSKP AKPKA  K  AKP A AKP  KA P  
Sbjct: 121 NSYKL-PSGSKPAAAAVPAKKKPAAA--KSKPAAKPKAAVKPKAKPAAKAKPAAKAKPAA 180

Query: 181 KAAPKPKAAP---------------AKSKSSAVAKPKAA-------AKTKAAPKP--KAK 240
           KA P  KA P               AK K++A AKPKAA       AKTKAA KP  KAK
Sbjct: 181 KAKPAAKAKPAAKAKPAAKAKPVAKAKPKAAAAAKPKAAVKPKAAPAKTKAAVKPNLKAK 240

Query: 241 EKPAKAARTSTRTSPGRKAPAPKPVVKKAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSK 273
              AK A+T+TRT+P RKA AP     KA  AKK P K   AK VKS AKK+  KRG K
Sbjct: 241 TTTAKVAKTATRTTPSRKA-AP-----KATPAKKEPVKKAPAKNVKSPAKKATPKRGRK 287

[Close]

BLAST of CsGy6G020990 vs. ExPASy Swiss-Prot
Match: P08283 (Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 8.0e-45
Identity = 158/280 (56.43%), Postives = 180/280 (64.29%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEQA----EENPANKSGRS--KKSKEPKDKKPAAPRKPRNPP 60
           MATEEP+V VE+  EP   E       E P  +  ++  +K+K+ K  KP    KPRNP 
Sbjct: 1   MATEEPIVAVETVPEPIVTEPTTITEPEVPEKEEPKAEVEKTKKAKGSKPKKASKPRNPA 60

Query: 61  THPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLV 120
           +HP YEEMIKDAIV+LKE+ GSSQYAI KFIEEKQKQLP NFKKLLL +LKK V SGKL+
Sbjct: 61  SHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPANFKKLLLQNLKKNVASGKLI 120

Query: 121 KVKSSFKLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAV-AKSPAKPKAAAKPKPKA 180
           KVK SFKL           S A KKP  AKPK+K  AK K+V AK  AKPKA A  KPK 
Sbjct: 121 KVKGSFKL-----------SAAAKKPAVAKPKAKTAAKAKSVKAKPAAKPKAKAVVKPKV 180

Query: 181 TPKPKA-APKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKA 240
             K KA A KPK A AK K+ A      AAK KA  KPK+K KPAK A+TS +T+PG+K 
Sbjct: 181 ASKAKAVAAKPKKAAAKPKTVAAKTKPTAAKPKAVVKPKSKVKPAKVAKTSVKTTPGKKV 240

Query: 241 PAPKPVVKKAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSK 273
            A K V     AAKK P KSVKAK VKS  KK   KRG +
Sbjct: 241 AAVKKV-----AAKKVPVKSVKAKSVKSPVKKVSVKRGGR 264

[Close]

BLAST of CsGy6G020990 vs. ExPASy Swiss-Prot
Match: P26569 (Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.4e-43
Identity = 162/286 (56.64%), Postives = 187/286 (65.38%), Query Frame = 0


Query: 1   MATEEPVVP--VESAAEPTNAEQAEENPANKSGRSKKSKEPK-DKKP---AAPRKPRNPP 60
           M+ EE  VP  V+S A  T  +  E+ PA K G+SKK+   K  KKP   AAP K +   
Sbjct: 1   MSIEEENVPTTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTS 60

Query: 61  THPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLV 120
           +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK K LPP F+KLLL +LK+LV S KLV
Sbjct: 61  SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLV 120

Query: 121 KVKSSFKLKPAKSAVV-KPASPAKKK-PVAAKPKSKPV-----AKPKAVAKSPAKPKAAA 180
           KVK+SFK+  A+SA   KPA+P KKK  V AKPK K       AK KA AK   KP A  
Sbjct: 121 KVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKV 180

Query: 181 KPKPKATPKPKAAPKPKAAPAKSKSSAVAKPKAAAKTKA-APKPKAKEKPAKAARTSTRT 240
             K K T KPKA    K   AK KS +VA   A +KTKA A KPKAKE+PAKA+RTSTRT
Sbjct: 181 VAKAKVTAKPKA----KVTAAKPKSKSVA---AVSKTKAVAAKPKAKERPAKASRTSTRT 240

Query: 241 SPGRKAPAPKPVVKKAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSK 273
           SPG+K  AP    KK    KKAP+KSV   KVKS AK++  ++  K
Sbjct: 241 SPGKKVAAP---AKKVAVTKKAPAKSV---KVKSPAKRASTRKAKK 273

[Close]

BLAST of CsGy6G020990 vs. ExPASy Swiss-Prot
Match: P26568 (Histone H1.1 OS=Arabidopsis thaliana OX=3702 GN=At1g06760 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.3e-31
Identity = 135/268 (50.37%), Postives = 157/268 (58.58%), Query Frame = 0


Query: 12  SAAEPTNAEQAEENPANKSGRSKKSKEPKDKKP-AAPRKPRNPPTHPPYEEMIKDAIVTL 71
           +A  P      E+ PA K  ++K  KE K+KK  AA  K R   +HP YEEMIKDAIVTL
Sbjct: 17  AADAPVTDAAVEKKPAAKGRKTKNVKEVKEKKTVAAAPKKRTVSSHPTYEEMIKDAIVTL 76

Query: 72  KERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSFKLKPAKSAVV 131
           KERTGSSQYAI KFIEEK+K+LPP F+KLLL +LK+LV SGKLVKVK+SFKL  A +   
Sbjct: 77  KERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKLPSASAKAS 136

Query: 132 KPASPAKKK-PVAAKPKSKPV--AKPKAVAKSPAKPKAAAKPK----PKATPKPKAAPKP 191
            P + A+K  P   KP +  V  AK K  A S AK   A KPK     K T K KA P P
Sbjct: 137 SPKAAAEKSAPAKKKPATVAVTKAKRKVAAASKAKKTIAVKPKTAAAKKVTAKAKAKPVP 196

Query: 192 KAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVKKAP 251
           +A  A +K  AV             KPKAK +PAKAA+T+  TSP +KA A    V    
Sbjct: 197 RATAAATKRKAV-----------DAKPKAKARPAKAAKTAKVTSPAKKAVAATKKVATVA 256

Query: 252 AAKKAPSKSVKAKKVKSLAKKSPAKRGS 272
             KK P K V    VK    KSPAKR S
Sbjct: 257 TKKKTPVKKV----VKPKTVKSPAKRAS 269

[Close]

BLAST of CsGy6G020990 vs. ExPASy Swiss-Prot
Match: P27806 (Histone H1 OS=Triticum aestivum OX=4565 PE=2 SV=2)

HSP 1 Score: 129.4 bits (324), Expect = 6.2e-29
Identity = 127/243 (52.26%), Postives = 152/243 (62.55%), Query Frame = 0


Query: 2   ATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYEE 61
           A + PV  VE A     A+ A + PA K  ++ K+ + K   P  P+KPR  P HP Y E
Sbjct: 7   AADIPVPQVEVA-----ADAAVDTPAAKPAKAPKAAKAKKSTP-GPKKPRVTPAHPSYAE 66

Query: 62  MIKDAIVTLKERTGSSQYAITKFIEEKQK-QLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 121
           M+ +AI  LKER+GSS  AI KFIE+K K  LP NF+K+LL  +KKLV +GKL KVK S+
Sbjct: 67  MVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAGKLTKVKGSY 126

Query: 122 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA 181
           KL  A +A VKP +  KKKP AAKPK+K  AK K  AKSPAK KAAAKPK KA  K KA 
Sbjct: 127 KLAKAPAA-VKPKTATKKKP-AAKPKAKAPAK-KTAAKSPAK-KAAAKPKAKAPAKAKAV 186

Query: 182 PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRK-APAPKPVV 241
            KPKAA   +K  A AKPKA A  K AP     +KPA     + R +P +K APA KP  
Sbjct: 187 AKPKAA---AKPKAAAKPKAKAAAKKAPAAATPKKPAARKPPTKRATPVKKAAPAKKPAA 236

Query: 242 KKA 243
           KKA
Sbjct: 247 KKA 236

[Close]

BLAST of CsGy6G020990 vs. NCBI nr
Match: XP_004140078.1 (histone H1 [Cucumis sativus] >KGN47855.1 hypothetical protein Csa_003138 [Cucumis sativus])

HSP 1 Score: 455 bits (1170), Expect = 8.69e-160
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA 180
           KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA 180

Query: 181 PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240
           PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK
Sbjct: 181 PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSKGR 274
           KAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSKGR
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSKGR 274

[Close]

BLAST of CsGy6G020990 vs. NCBI nr
Match: XP_008449373.1 (PREDICTED: histone H1 [Cucumis melo])

HSP 1 Score: 430 bits (1105), Expect = 6.90e-150
Identity = 261/274 (95.26%), Postives = 266/274 (97.08%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPTNAEQAEENP NK+ +SKKSKEPK+KKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLP NFKKLLLFHLKKLV SGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA 180
           KLKPAKSAVVKPASPAKKKPVAAKPKSK VAKPKAVAKSPAKPKAAAKPKPK T KPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180

Query: 181 PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240
           PKPKAAP KSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK
Sbjct: 181 PKPKAAPPKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSKGR 274
           KAPAAKKAPSKSVKAKKVKSLAKK+P+KRGSKGR
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPSKRGSKGR 274

[Close]

BLAST of CsGy6G020990 vs. NCBI nr
Match: KAA0057394.1 (histone H1 [Cucumis melo var. makuwa] >TYK30091.1 histone H1 [Cucumis melo var. makuwa])

HSP 1 Score: 428 bits (1101), Expect = 5.89e-148
Identity = 260/273 (95.24%), Postives = 265/273 (97.07%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPTNAEQAEENP NK+ +SKKSKEPK+KKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLP NFKKLLLFHLKKLV SGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA 180
           KLKPAKSAVVKPASPAKKKPVAAKPKSK VAKPKAVAKSPAKPKAAAKPKPK T KPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180

Query: 181 PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240
           PKPKAAP KSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK
Sbjct: 181 PKPKAAPPKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSKG 273
           KAPAAKKAPSKSVKAKKVKSLAKK+P+KRGSKG
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPSKRGSKG 273

[Close]

BLAST of CsGy6G020990 vs. NCBI nr
Match: XP_022145924.1 (histone H1 [Momordica charantia])

HSP 1 Score: 394 bits (1011), Expect = 1.31e-135
Identity = 242/272 (88.97%), Postives = 249/272 (91.54%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPT+AE AEENP NK+ +SKKSKEPK+KKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120
           EMI DAIVTLKERTGSSQYAITKFIEEKQK LP NFKKLLLFHLKKLV SGKLVKVKSSF
Sbjct: 61  EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA 180
           KLKPAKSAVVKP SPAKKKP AAKPK K  AK KAVAKSPAKPKAAAKPKPK   KPKAA
Sbjct: 121 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180

Query: 181 PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240
           PKPK APAKSKSSAVAKPKAA KTKAAPKPKAKEKPAK ARTSTRTSPGR+APAPKP  K
Sbjct: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPK 240

Query: 241 KAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSK 272
           KAPAAKKAP+KSVKAKKVKS AKK+PAKRG K
Sbjct: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 272

[Close]

BLAST of CsGy6G020990 vs. NCBI nr
Match: XP_038888055.1 (histone H1-like [Benincasa hispida])

HSP 1 Score: 394 bits (1011), Expect = 1.31e-135
Identity = 242/272 (88.97%), Postives = 253/272 (93.01%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEP N EQAEENPANK+ +SKKSKEPK+KKPAA +K RNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPDNVEQAEENPANKAAKSKKSKEPKEKKPAARKKTRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEK+KQLPPNFKK+LLFHLKKLV SGKLVKVK+SF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKEKQLPPNFKKILLFHLKKLVASGKLVKVKNSF 120

Query: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA 180
           KLKPAKSA+VKPA+PAKKKPVAAKPKSK VAKPKAVAKSPAKPKAAAKPKPK   KPKAA
Sbjct: 121 KLKPAKSAIVKPAAPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAA 180

Query: 181 PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240
           PKPK A AKSKSSAVAKPKAAAKTKAAPKPKAKEKPAK ARTSTRTSPGRKAPAPKP VK
Sbjct: 181 PKPKPATAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPAVK 240

Query: 241 KAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSK 272
           KA A KKAP+KSVKAKKVKS AKK+ AKRG K
Sbjct: 241 KAQATKKAPAKSVKAKKVKSPAKKALAKRGRK 272

[Close]

BLAST of CsGy6G020990 vs. ExPASy TrEMBL
Match: A0A0A0KDR2 (H15 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G407650 PE=3 SV=1)

HSP 1 Score: 455 bits (1170), Expect = 4.21e-160
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA 180
           KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA 180

Query: 181 PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240
           PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK
Sbjct: 181 PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSKGR 274
           KAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSKGR
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSKGR 274

[Close]

BLAST of CsGy6G020990 vs. ExPASy TrEMBL
Match: A0A1S3BL93 (histone H1 OS=Cucumis melo OX=3656 GN=LOC103491272 PE=3 SV=1)

HSP 1 Score: 430 bits (1105), Expect = 3.34e-150
Identity = 261/274 (95.26%), Postives = 266/274 (97.08%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPTNAEQAEENP NK+ +SKKSKEPK+KKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLP NFKKLLLFHLKKLV SGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA 180
           KLKPAKSAVVKPASPAKKKPVAAKPKSK VAKPKAVAKSPAKPKAAAKPKPK T KPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180

Query: 181 PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240
           PKPKAAP KSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK
Sbjct: 181 PKPKAAPPKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSKGR 274
           KAPAAKKAPSKSVKAKKVKSLAKK+P+KRGSKGR
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPSKRGSKGR 274

[Close]

BLAST of CsGy6G020990 vs. ExPASy TrEMBL
Match: A0A5A7UQL0 (Histone H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00660 PE=3 SV=1)

HSP 1 Score: 428 bits (1101), Expect = 2.85e-148
Identity = 260/273 (95.24%), Postives = 265/273 (97.07%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPTNAEQAEENP NK+ +SKKSKEPK+KKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLP NFKKLLLFHLKKLV SGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA 180
           KLKPAKSAVVKPASPAKKKPVAAKPKSK VAKPKAVAKSPAKPKAAAKPKPK T KPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180

Query: 181 PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240
           PKPKAAP KSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK
Sbjct: 181 PKPKAAPPKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSKG 273
           KAPAAKKAPSKSVKAKKVKSLAKK+P+KRGSKG
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPSKRGSKG 273

[Close]

BLAST of CsGy6G020990 vs. ExPASy TrEMBL
Match: A0A6J1CWP2 (histone H1 OS=Momordica charantia OX=3673 GN=LOC111015272 PE=3 SV=1)

HSP 1 Score: 394 bits (1011), Expect = 6.35e-136
Identity = 242/272 (88.97%), Postives = 249/272 (91.54%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPT+AE AEENP NK+ +SKKSKEPK+KKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120
           EMI DAIVTLKERTGSSQYAITKFIEEKQK LP NFKKLLLFHLKKLV SGKLVKVKSSF
Sbjct: 61  EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA 180
           KLKPAKSAVVKP SPAKKKP AAKPK K  AK KAVAKSPAKPKAAAKPKPK   KPKAA
Sbjct: 121 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180

Query: 181 PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240
           PKPK APAKSKSSAVAKPKAA KTKAAPKPKAKEKPAK ARTSTRTSPGR+APAPKP  K
Sbjct: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPK 240

Query: 241 KAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSK 272
           KAPAAKKAP+KSVKAKKVKS AKK+PAKRG K
Sbjct: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 272

[Close]

BLAST of CsGy6G020990 vs. ExPASy TrEMBL
Match: A0A1S3BGU4 (histone H1-like OS=Cucumis melo OX=3656 GN=LOC103489696 PE=3 SV=1)

HSP 1 Score: 370 bits (951), Expect = 7.43e-127
Identity = 235/272 (86.40%), Postives = 248/272 (91.18%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVE AAE TNAEQAEENPAN++ +SKKS+EPK+KKPAA RKPR+PPTHPPYE
Sbjct: 1   MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIE KQKQLP NFKKLLLFHLKKL+ SGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF 120

Query: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA 180
           KLKPA   V KPASP KK PVAAKP+SK VAKPKAVAKSPAKPKAAAKPKPK   KPKAA
Sbjct: 121 KLKPA---VAKPASPVKK-PVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAA 180

Query: 181 PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240
           PKPK APAKSKSSAVAKPKAA KTKAAPKPKAKEKPAK ARTSTRTSPGRKAPAPKPVVK
Sbjct: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSK 272
           KAPAAKKA ++SVK+KKV+S AK +PAKRG K
Sbjct: 241 KAPAAKKALARSVKSKKVESPAKTAPAKRGRK 268

[Close]

BLAST of CsGy6G020990 vs. TAIR 10
Match: AT2G30620.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 176.4 bits (446), Expect = 3.1e-44
Identity = 162/286 (56.64%), Postives = 187/286 (65.38%), Query Frame = 0


Query: 1   MATEEPVVP--VESAAEPTNAEQAEENPANKSGRSKKSKEPK-DKKP---AAPRKPRNPP 60
           M+ EE  VP  V+S A  T  +  E+ PA K G+SKK+   K  KKP   AAP K +   
Sbjct: 1   MSIEEENVPTTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTS 60

Query: 61  THPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLV 120
           +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK K LPP F+KLLL +LK+LV S KLV
Sbjct: 61  SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLV 120

Query: 121 KVKSSFKLKPAKSAVV-KPASPAKKK-PVAAKPKSKPV-----AKPKAVAKSPAKPKAAA 180
           KVK+SFK+  A+SA   KPA+P KKK  V AKPK K       AK KA AK   KP A  
Sbjct: 121 KVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKV 180

Query: 181 KPKPKATPKPKAAPKPKAAPAKSKSSAVAKPKAAAKTKA-APKPKAKEKPAKAARTSTRT 240
             K K T KPKA    K   AK KS +VA   A +KTKA A KPKAKE+PAKA+RTSTRT
Sbjct: 181 VAKAKVTAKPKA----KVTAAKPKSKSVA---AVSKTKAVAAKPKAKERPAKASRTSTRT 240

Query: 241 SPGRKAPAPKPVVKKAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSK 273
           SPG+K  AP    KK    KKAP+KSV   KVKS AK++  ++  K
Sbjct: 241 SPGKKVAAP---AKKVAVTKKAPAKSV---KVKSPAKRASTRKAKK 273

[Close]

BLAST of CsGy6G020990 vs. TAIR 10
Match: AT1G06760.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.6e-32
Identity = 135/268 (50.37%), Postives = 157/268 (58.58%), Query Frame = 0


Query: 12  SAAEPTNAEQAEENPANKSGRSKKSKEPKDKKP-AAPRKPRNPPTHPPYEEMIKDAIVTL 71
           +A  P      E+ PA K  ++K  KE K+KK  AA  K R   +HP YEEMIKDAIVTL
Sbjct: 17  AADAPVTDAAVEKKPAAKGRKTKNVKEVKEKKTVAAAPKKRTVSSHPTYEEMIKDAIVTL 76

Query: 72  KERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSFKLKPAKSAVV 131
           KERTGSSQYAI KFIEEK+K+LPP F+KLLL +LK+LV SGKLVKVK+SFKL  A +   
Sbjct: 77  KERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKLPSASAKAS 136

Query: 132 KPASPAKKK-PVAAKPKSKPV--AKPKAVAKSPAKPKAAAKPK----PKATPKPKAAPKP 191
            P + A+K  P   KP +  V  AK K  A S AK   A KPK     K T K KA P P
Sbjct: 137 SPKAAAEKSAPAKKKPATVAVTKAKRKVAAASKAKKTIAVKPKTAAAKKVTAKAKAKPVP 196

Query: 192 KAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVKKAP 251
           +A  A +K  AV             KPKAK +PAKAA+T+  TSP +KA A    V    
Sbjct: 197 RATAAATKRKAV-----------DAKPKAKARPAKAAKTAKVTSPAKKAVAATKKVATVA 256

Query: 252 AAKKAPSKSVKAKKVKSLAKKSPAKRGS 272
             KK P K V    VK    KSPAKR S
Sbjct: 257 TKKKTPVKKV----VKPKTVKSPAKRAS 269

[Close]

BLAST of CsGy6G020990 vs. TAIR 10
Match: AT2G30620.2 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 134.4 bits (337), Expect = 1.4e-31
Identity = 126/278 (45.32%), Postives = 149/278 (53.60%), Query Frame = 0


Query: 1   MATEEPVVP--VESAAEPTNAEQAEENPANKSGRSKKSKEPK-DKKP---AAPRKPRNPP 60
           M+ EE  VP  V+S A  T  +  E+ PA K G+SKK+   K  KKP   AAP K +   
Sbjct: 1   MSIEEENVPTTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTS 60

Query: 61  THPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLV 120
           +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK K LPP F+KLLL +LK+LV S KLV
Sbjct: 61  SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLV 120

Query: 121 KVKSSFKLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKAT 180
           KVK+SFK+  A+SA                                            AT
Sbjct: 121 KVKASFKIPSARSA--------------------------------------------AT 180

Query: 181 PKPKAAPKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPA 240
           PKP       AAP K K++ VAKP                   KA+RTSTRTSPG+K  A
Sbjct: 181 PKP-------AAPVKKKATVVAKP-------------------KASRTSTRTSPGKKVAA 202

Query: 241 PKPVVKKAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSK 273
           P    KK    KKAP+KSV   KVKS AK++  ++  K
Sbjct: 241 P---AKKVAVTKKAPAKSV---KVKSPAKRASTRKAKK 202

[Close]

BLAST of CsGy6G020990 vs. TAIR 10
Match: AT2G18050.1 (histone H1-3 )

HSP 1 Score: 59.3 bits (142), Expect = 5.6e-09
Identity = 67/169 (39.64%), Postives = 91/169 (53.85%), Query Frame = 0


Query: 42  KKPAAPRKPRNP--PTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQ-LPPNFKK 101
           KK  A +KPR P   THPPY +MIK+A++ LKE+ GSS YAI K IEEK K  LP +F+K
Sbjct: 8   KKTPAAKKPRKPKTTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRK 67

Query: 102 LLLFHLKKLVTSGKLVKVKSSFKLKPAKSAVVKPASPAKKKPVAAKPKSKPVAK-PKAVA 161
            L   LK  V  GKLVK+++S+KL      + +      KK +  K + K + K  ++ +
Sbjct: 68  TLSLQLKNSVAKGKLVKIRASYKLSDTTKMITRQQDKKNKKNM--KQEDKEITKRTRSSS 127

Query: 162 KSPAKPKAAAKPKPKATPKPKAAPKPKAAPAKSKSSAVAKPKAAAKTKA 207
             P K  +  K + K   K       KA   KS  S+V K KA   + A
Sbjct: 128 TRPKKTVSVNKQEKKRKVK-------KARQPKSIKSSVGKKKAMKASAA 167

[Close]

BLAST of CsGy6G020990 vs. TAIR 10
Match: AT2G18050.2 (histone H1-3 )

HSP 1 Score: 43.5 bits (101), Expect = 3.2e-04
Identity = 55/147 (37.41%), Postives = 77/147 (52.38%), Query Frame = 0


Query: 62  MIKDAIVTLKERTGSSQYAITKFIEEKQKQ-LPPNFKKLLLFHLKKLVTSGKLVKVKSSF 121
           MIK+A++ LKE+ GSS YAI K IEEK K  LP +F+K L   LK  V  GKLVK+++S+
Sbjct: 1   MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASY 60

Query: 122 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAK-PKAVAKSPAKPKAAAKPKPKATPKPKA 181
           KL      + +      KK +  K + K + K  ++ +  P K  +  K + K   K   
Sbjct: 61  KLSDTTKMITRQQDKKNKKNM--KQEDKEITKRTRSSSTRPKKTVSVNKQEKKRKVK--- 120

Query: 182 APKPKAAPAKSKSSAVAKPKAAAKTKA 207
               KA   KS  S+V K KA   + A
Sbjct: 121 ----KARQPKSIKSSVGKKKAMKASAA 138

The following BLAST results are available for this feature:

BLAST of CsGy6G020990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P37218	3.5e-48	59.20	Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1	[more]
P08283	8.0e-45	56.43	Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
P26569	4.4e-43	56.64	Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1	[more]
P26568	2.3e-31	50.37	Histone H1.1 OS=Arabidopsis thaliana OX=3702 GN=At1g06760 PE=1 SV=1	[more]
P27806	6.2e-29	52.26	Histone H1 OS=Triticum aestivum OX=4565 PE=2 SV=2	[more]

BLAST of CsGy6G020990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140078.1	8.69e-160	100.00	histone H1 [Cucumis sativus] >KGN47855.1 hypothetical protein Csa_003138 [Cucumi...	[more]
XP_008449373.1	6.90e-150	95.26	PREDICTED: histone H1 [Cucumis melo]	[more]
KAA0057394.1	5.89e-148	95.24	histone H1 [Cucumis melo var. makuwa] >TYK30091.1 histone H1 [Cucumis melo var. ...	[more]
XP_022145924.1	1.31e-135	88.97	histone H1 [Momordica charantia]	[more]
XP_038888055.1	1.31e-135	88.97	histone H1-like [Benincasa hispida]	[more]

BLAST of CsGy6G020990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDR2	4.21e-160	100.00	H15 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G407650 PE=3 SV...	[more]
A0A1S3BL93	3.34e-150	95.26	histone H1 OS=Cucumis melo OX=3656 GN=LOC103491272 PE=3 SV=1	[more]
A0A5A7UQL0	2.85e-148	95.24	Histone H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00660 PE=...	[more]
A0A6J1CWP2	6.35e-136	88.97	histone H1 OS=Momordica charantia OX=3673 GN=LOC111015272 PE=3 SV=1	[more]
A0A1S3BGU4	7.43e-127	86.40	histone H1-like OS=Cucumis melo OX=3656 GN=LOC103489696 PE=3 SV=1	[more]

BLAST of CsGy6G020990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30620.1	3.1e-44	56.64	winged-helix DNA-binding transcription factor family protein	[more]
AT1G06760.1	1.6e-32	50.37	winged-helix DNA-binding transcription factor family protein	[more]
AT2G30620.2	1.4e-31	45.32	winged-helix DNA-binding transcription factor family protein	[more]
AT2G18050.1	5.6e-09	39.64	histone H1-3	[more]
AT2G18050.2	3.2e-04	37.41	histone H1-3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005819	Linker histone H1/H5	PRINTS	PR00624	HISTONEH5	coord: 182..199 score: 39.51 coord: 152..166 score: 40.74 coord: 204..223 score: 23.33 coord: 69..86 score: 43.21 coord: 42..63 score: 37.37
IPR005818	Linker histone H1/H5, domain H15	SMART	SM00526	h15plus2	coord: 53..119 e-value: 4.8E-34 score: 129.1
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 56..122 e-value: 5.4E-19 score: 68.3
IPR005818	Linker histone H1/H5, domain H15	PROSITE	PS51504	H15	coord: 55..124 score: 30.060772
IPR005818	Linker histone H1/H5, domain H15	CDD	cd00073	H15	coord: 53..133 e-value: 4.43367E-19 score: 77.6615
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 51..129 e-value: 3.9E-22 score: 80.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..274
None	No IPR available	PANTHER	PTHR11467	HISTONE H1	coord: 2..272
None	No IPR available	PANTHER	PTHR11467:SF131	HISTONE H1.1	coord: 2..272
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 52..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G020990.2	CsGy6G020990.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030261	chromosome condensation
biological_process	GO:0045910	negative regulation of DNA recombination
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0016584	nucleosome positioning
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0031492	nucleosomal DNA binding
molecular_function	GO:0003677	DNA binding