CsGy6G020955 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G020955
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Ubiquitin carboxyl-terminal hydrolase family protein
Location	Gy14Chr6: 21603528 .. 21605996 (-)
RNA-Seq Expression	CsGy6G020955
Synteny	CsGy6G020955

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGAAAGAAGAAGAAAAAAGAAAGAAATGAAAAGAAGTAAGCCTACCCTCATCGGCCGTCTTCCTTTCTCTATCAAATAGCCGCCGACCCTCTTCTCAGACGACACTCCAGCGGCCACACCCACCGAACGCCCAGCTCTGTAGTCGACGACGGTCTACGTTCACTCCGAACGGCTTCAGGAACATTGTTTCTTCTTCGTTCGAGACTCCAGCGTGAACGAACAACAAGTTCTGGATCACGTTTTCAACGACTGGGTGTGTGTTTCAGGCTGCGGCAGCGTTTTTGGCTTGGGGATAAGTGTCACTCGTGGAAGTTCAATAGGTGTTAATCTTTGTCCAAGGAAGTGAATTTTCAAGGATTGTCTATCGAGGTAATTAGTTTCGAAATTGTTTGCACGCTTTAAATGGAGATTCTTATGTGGTCGATTGTTAATTGACATCTCGGATTGAATTAACTGTTGGTCTTACCAAGGGGTAGCCATACCTGCTCGGCTACATGAACTATGCATTTATCCTACTTTGTATTTGAACTGAATGACTGAAAGTTCTGTTTGTATGGATGTATTTGTTGATTGAAAGTTCTTTTTACCGATTGAAGAATTTTCATTTGAAAGTATTGAAATATTAGTGTTATAAAAAGTATGAAAATACCATTCATTATAGGAGTTTCAGCTTGAAGCATTTAGGTTTTAAAGCTTATTTGCTTGCAATATTTTGATTTTGAAATACCAATCTTTCTAGAAAAATTTTGACAGAAAGTTCTGTGAATTTCAAAGCTTGATATGAGAATTGCTTATTGAGTATTTTTGTACTCATCTTTGATTTTAAAATGTTTTCAGATGGCAAATCAGGTGATAGTTTTAAAGGGTAGTTAGGGTGACTCGATTCCGAAGCAGCCACCAAGCAGAGTCTAAGTAGAATTTTCGTTCCCCTTGATTATTTGATCTTTACAAACTCTTGTCTAATTTGGTCAGTTTAGCCTTCTCGATTCCCATTGTCAGCCATTTCTATTTCCCAATCTAGACAATTTTTTCTTAACCTTTCTTACTTATGATTCTACAAATTACTAGAATCCCTCATCGTTTCACCCAGATTCGTGCTTTCATTGATGCAAAGGTCAAATGGGTTAGAGATCCATACCTTGATTTTGCAGTTCAAAGAGAGAAAAACCTCAAACAAGTAATTTCCCTTAAGAATATGATAATTTCGAGTCCTTTAACATCTGTTCCACTTTCTTCTTTCTTTTTGCTTAAACAGAACCTCAAAGTTCCCACTACCACCATCTCCAAGTTCTTTGAGTTATACCCTTCTGTTTTCATCCAATTCCAGCCTAGTCTTGGTCTCCATCCTCATGTCAAAATCACCTCACAAGCTTTACTTCTCCACAAGGAAGAATCAACCATTCATAACTCTCGACCGCATAGAGATGATGTTGTGAAGAGGTTAGCAAAACTATTGATGCTCACAGGGGCTGGAAAATTGCCCCTATATGTTATTGAGAGGTTGCAATGGGATTTGGGTTTACCCTATAGGTTCATTCCAACCCTTCTTGCTGATTATCCTGAATATTTTCAAGTTTGTAGTGTGAAAGACTGTTTAACAGGTGAACAAACTCTTGCATTAGAGCTACTTTCTTGGAGGAAAGACCTTGCAGTCTCTGAATTGAAGAAAAGGGAATCTCTGGAAGGAAATTTTGGGAGAAGGAAAAGAAATCATATTCCATTTCCAATGAGTTTCCCGAGGGGTTTTGATTTGCAAAAGAAAGTGATGAATTGGGTGGAGGAGTGGCAGGATCTGCCTTACATTTCGCCCTATGAAAATGCATTCCATCTAGCACCAAATAGTGACCAAGCTGAGAAATGGGCTGTGGCTGTTCTCCATGAGTTGCTTTATCTTACGATCTCAAAGAAAACCGAAAAGGAGAACATCTTCTGCTTGGGAGACTATTTGGGGTTTGGTTCTAGGTTTAAGAAAGCCATAGCTCATCACCCAGGTATATTTTATGTCTCAAACAAGATTAGAACACAAACTGTAGTTCTTCGGGAGGCTTATAAGAAGGATTTTTTGGTAGAGAAGCACCCTTTGATGGGGATGAGGCATCAGTACCTTCACCTTATGAACAAAGTTATAAGGAAACCTAGACCAGGTATCATATTAGCTTCTTCCAGAGGTAAAAGTAGCAATATTACATTTGCCAATAAAGAAGTTTAACTGAAAGAATTTGTTGTGCTTTTTCATTCATCGGTCTTGAGGAATACTATGCTCTCTCATAACAGTGCATTTCATGAATGAAAACAGTATTAAAGCCTTCATGATCAGACATGACTCTGGCAGTTGAACTGTTTTTTCTTAAGAGCTTGGTGACATCTTGGTAGAGCATCAGAGAAATTTTGTTAGTTAAATTGTGTTTCGGTTAGCGTTAATTGACTTGTATTCTCCCTTTTGAGGTAGAAGGTTCAATAAAGGGT

mRNA sequence

AAAAGAAAGAAGAAGAAAAAAGAAAGAAATGAAAAGAAGTAAGCCTACCCTCATCGGCCGTCTTCCTTTCTCTATCAAATAGCCGCCGACCCTCTTCTCAGACGACACTCCAGCGGCCACACCCACCGAACGCCCAGCTCTGTAGTCGACGACGGTCTACGTTCACTCCGAACGGCTTCAGGAACATTGTTTCTTCTTCGTTCGAGACTCCAGCGTGAACGAACAACAAGTTCTGGATCACGTTTTCAACGACTGGGTGTGTGTTTCAGGCTGCGGCAGCGTTTTTGGCTTGGGGATAAGTGTCACTCGTGGAAGTTCAATAGGTGTTAATCTTTGTCCAAGGAAGTGAATTTTCAAGGATTGTCTATCGAGATGGCAAATCAGGTGATAGTTTTAAAGGGTAGTTAGGGTGACTCGATTCCGAAGCAGCCACCAAGCAGAGTCTAAGTAGAATTTTCGTTCCCCTTGATTATTTGATCTTTACAAACTCTTGTCTAATTTGGTCAGTTTAGCCTTCTCGATTCCCATTGTCAGCCATTTCTATTTCCCAATCTAGACAATTTTTTCTTAACCTTTCTTACTTATGATTCTACAAATTACTAGAATCCCTCATCGTTTCACCCAGATTCGTGCTTTCATTGATGCAAAGGTCAAATGGGTTAGAGATCCATACCTTGATTTTGCAGTTCAAAGAGAGAAAAACCTCAAACAAGTAATTTCCCTTAAGAATATGATAATTTCGAGTCCTTTAACATCTGTTCCACTTTCTTCTTTCTTTTTGCTTAAACAGAACCTCAAAGTTCCCACTACCACCATCTCCAAGTTCTTTGAGTTATACCCTTCTGTTTTCATCCAATTCCAGCCTAGTCTTGGTCTCCATCCTCATGTCAAAATCACCTCACAAGCTTTACTTCTCCACAAGGAAGAATCAACCATTCATAACTCTCGACCGCATAGAGATGATGTTGTGAAGAGGTTAGCAAAACTATTGATGCTCACAGGGGCTGGAAAATTGCCCCTATATGTTATTGAGAGGTTGCAATGGGATTTGGGTTTACCCTATAGGTTCATTCCAACCCTTCTTGCTGATTATCCTGAATATTTTCAAGTTTGTAGTGTGAAAGACTGTTTAACAGGTGAACAAACTCTTGCATTAGAGCTACTTTCTTGGAGGAAAGACCTTGCAGTCTCTGAATTGAAGAAAAGGGAATCTCTGGAAGGAAATTTTGGGAGAAGGAAAAGAAATCATATTCCATTTCCAATGAGTTTCCCGAGGGGTTTTGATTTGCAAAAGAAAGTGATGAATTGGGTGGAGGAGTGGCAGGATCTGCCTTACATTTCGCCCTATGAAAATGCATTCCATCTAGCACCAAATAGTGACCAAGCTGAGAAATGGGCTGTGGCTGTTCTCCATGAGTTGCTTTATCTTACGATCTCAAAGAAAACCGAAAAGGAGAACATCTTCTGCTTGGGAGACTATTTGGGGTTTGGTTCTAGGTTTAAGAAAGCCATAGCTCATCACCCAGGTATATTTTATGTCTCAAACAAGATTAGAACACAAACTGTAGTTCTTCGGGAGGCTTATAAGAAGGATTTTTTGGTAGAGAAGCACCCTTTGATGGGGATGAGGCATCAGTACCTTCACCTTATGAACAAAGTTATAAGGAAACCTAGACCAGGTATCATATTAGCTTCTTCCAGAGGTAAAAGTAGCAATATTACATTTGCCAATAAAGAAGTTTAACTGAAAGAATTTGTTGTGCTTTTTCATTCATCGGTCTTGAGGAATACTATGCTCTCTCATAACAGTGCATTTCATGAATGAAAACAGTATTAAAGCCTTCATGATCAGACATGACTCTGGCAGTTGAACTGTTTTTTCTTAAGAGCTTGGTGACATCTTGGTAGAGCATCAGAGAAATTTTGTTAGTTAAATTGTGTTTCGGTTAGCGTTAATTGACTTGTATTCTCCCTTTTGAGGTAGAAGGTTCAATAAAGGGT

Coding sequence (CDS)

ATGATTCTACAAATTACTAGAATCCCTCATCGTTTCACCCAGATTCGTGCTTTCATTGATGCAAAGGTCAAATGGGTTAGAGATCCATACCTTGATTTTGCAGTTCAAAGAGAGAAAAACCTCAAACAAGTAATTTCCCTTAAGAATATGATAATTTCGAGTCCTTTAACATCTGTTCCACTTTCTTCTTTCTTTTTGCTTAAACAGAACCTCAAAGTTCCCACTACCACCATCTCCAAGTTCTTTGAGTTATACCCTTCTGTTTTCATCCAATTCCAGCCTAGTCTTGGTCTCCATCCTCATGTCAAAATCACCTCACAAGCTTTACTTCTCCACAAGGAAGAATCAACCATTCATAACTCTCGACCGCATAGAGATGATGTTGTGAAGAGGTTAGCAAAACTATTGATGCTCACAGGGGCTGGAAAATTGCCCCTATATGTTATTGAGAGGTTGCAATGGGATTTGGGTTTACCCTATAGGTTCATTCCAACCCTTCTTGCTGATTATCCTGAATATTTTCAAGTTTGTAGTGTGAAAGACTGTTTAACAGGTGAACAAACTCTTGCATTAGAGCTACTTTCTTGGAGGAAAGACCTTGCAGTCTCTGAATTGAAGAAAAGGGAATCTCTGGAAGGAAATTTTGGGAGAAGGAAAAGAAATCATATTCCATTTCCAATGAGTTTCCCGAGGGGTTTTGATTTGCAAAAGAAAGTGATGAATTGGGTGGAGGAGTGGCAGGATCTGCCTTACATTTCGCCCTATGAAAATGCATTCCATCTAGCACCAAATAGTGACCAAGCTGAGAAATGGGCTGTGGCTGTTCTCCATGAGTTGCTTTATCTTACGATCTCAAAGAAAACCGAAAAGGAGAACATCTTCTGCTTGGGAGACTATTTGGGGTTTGGTTCTAGGTTTAAGAAAGCCATAGCTCATCACCCAGGTATATTTTATGTCTCAAACAAGATTAGAACACAAACTGTAGTTCTTCGGGAGGCTTATAAGAAGGATTTTTTGGTAGAGAAGCACCCTTTGATGGGGATGAGGCATCAGTACCTTCACCTTATGAACAAAGTTATAAGGAAACCTAGACCAGGTATCATATTAGCTTCTTCCAGAGGTAAAAGTAGCAATATTACATTTGCCAATAAAGAAGTTTAA

Protein sequence

MILQITRIPHRFTQIRAFIDAKVKWVRDPYLDFAVQREKNLKQVISLKNMIISSPLTSVPLSSFFLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHNSRPHRDDVVKRLAKLLMLTGAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQTLALELLSWRKDLAVSELKKRESLEGNFGRRKRNHIPFPMSFPRGFDLQKKVMNWVEEWQDLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIFCLGDYLGFGSRFKKAIAHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVIRKPRPGIILASSRGKSSNITFANKEV*

Homology

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BLAST of CsGy6G020955 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.5e-49
Identity = 121/357 (33.89%), Postives = 198/357 (55.46%), Query Frame = 0


Query: 13  TQIRAFIDAKVKWVRDPYLDFA--VQREKNLKQVISLKNMIISSPLTSVPLSSFFLLKQN 72
           TQ R ++D  +KW RDPY D    + R   LK V+SLKN I+  P   +P+S+     + 
Sbjct: 19  TQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQ 78

Query: 73  LKVPTTTISKFFELYPSVFIQF-QPSLGLHPHVKITSQALLLHKEESTIHNSRPHRDDVV 132
             V +T I+ F   +PS+F +F  P   L P  ++T +A  L ++E  ++ +    DD+ 
Sbjct: 79  FDV-STKIAHFLRKFPSIFEEFVGPEYNL-PWFRLTPEATELDRQERVVYQT--SADDLR 138

Query: 133 KRLAKLLMLTGAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQTL 192
            RL KL++++    LPL +++ ++W LGLP  ++     +    F+   ++D   G + L
Sbjct: 139 DRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMED---GVKGL 198

Query: 193 ALELLSWRKDLAVSELKKRESLEGNFGRRKRNHIPFPMSFPRGFDLQKKVMNWVEEWQDL 252
           A++     K L+V +   + +++   G      I FP+   +G  L+ K+ +W+ E+Q L
Sbjct: 199 AVDYNGGDKVLSVLQ---KNAMKKRRGEVSLEEIEFPLFPSKGCRLRVKIEDWLMEFQKL 258

Query: 253 PYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIFCLGDYLGFGSRFKKA 312
           PY+SPY++   L P+SD AEK  V  LHELL L +    E++ + CL  + G   +  KA
Sbjct: 259 PYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKA 318

Query: 313 IAHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLM--NKVIRKPR 365
              HP IFY+S K +T T +LRE Y+    VE HP++G+R +Y+ LM  +++I K R
Sbjct: 319 FERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSELILKSR 365

[Close]

BLAST of CsGy6G020955 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.4e-34
Identity = 114/357 (31.93%), Postives = 181/357 (50.70%), Query Frame = 0


Query: 19  IDAKVKWVRDPYLDFAVQREKNLKQVISLKNMIISSPLTSVPLSSFFLLKQNLKVPTTTI 78
           + A VK  ++   D  VQR+K LK V++++ +++S P   + L      +++L +     
Sbjct: 72  VRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKR-- 131

Query: 79  SKFFEL---YPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHNSRPHRDDVVKRLAKL 138
            +F  L   YP VF +           K+TS+A  L+ +E  I N     D +V +L KL
Sbjct: 132 RRFIALLRKYPGVF-EIVEEGAYSLRFKMTSEAERLYLDEMRIRNEL--EDVLVVKLRKL 191

Query: 139 LMLTGAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQTLALELLS 198
           +M++   ++ L  I  L+ DLGLP  F  T+   YP+YF+V      +   +  ALEL  
Sbjct: 192 VMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRV------VPTPRGPALELTH 251

Query: 199 WRKDLAVSELKKRESLEGNFGRRKRN-HIPFPMSF-----PRGFDLQKKVMNWVEEWQDL 258
           W  +LAVS  +  E         +RN  I  P  F     PRG +L K     + +++D+
Sbjct: 252 WDPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDM 311

Query: 259 PYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIFCLGDYLGFGSRFKKA 318
            YISPY++  HL   + + EK A  V+HELL LT  K+T  +++    +   F  + +  
Sbjct: 312 QYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGM 371

Query: 319 IAHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVIRKPRPG 367
           +  HP +FYVS K    +V LREAY+   L++K PL  ++ +   L++ V R PR G
Sbjct: 372 LIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVS-VPRFPRRG 416

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BLAST of CsGy6G020955 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.4e-33
Identity = 108/373 (28.95%), Postives = 183/373 (49.06%), Query Frame = 0


Query: 21  AKVKWVRDPYLDFAVQREKNLKQVISLKNMIISSPLTSVPLSSFFLLKQNLKVP-TTTIS 80
           A VK  ++   D  +QR+K LK V+ L+N++++ P   + L      +++L +     + 
Sbjct: 53  AAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLI 112

Query: 81  KFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHNSRPHRDDVVKRLAKLLMLT 140
                +P VF   +  +      ++T  A  L+ +E  + N        V +L KLLM++
Sbjct: 113 ALLRRFPGVFDVVEEGV-YSLRFRLTPAAERLYLDELRLRNE--SEGLAVAKLRKLLMMS 172

Query: 141 GAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQTLALELLSWRKD 200
              ++ +  +  L+ DLGLP  F  T+   YP+YF+V  +      ++  ALEL  W  +
Sbjct: 173 QEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRM------DRGPALELTHWDPE 232

Query: 201 LAVS--ELKKRESLEGNFGRRKRNHIPFPMSF-----PRGFDLQKKVMNWVEEWQDLPYI 260
           LAVS  EL + ES        +   I  P+ F     P+G  L +     +  ++++PYI
Sbjct: 233 LAVSAAELAEEES-RAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYI 292

Query: 261 SPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIFCLGDYLGFGSRFKKAIAH 320
           SPY +  HL   SD+ EK A  V+HE+L LT+ K+T  +++    +   F    +  I  
Sbjct: 293 SPYADFSHLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIR 352

Query: 321 HPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVIRKPRPGIILASS 380
           HP +FYVS K    +V LREAYK   LVEK+ L+ ++ + +  +  V R PR   +    
Sbjct: 353 HPDMFYVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEK-MRALVAVPRFPRRAAVGTGE 412

Query: 381 RGKSSNITFANKE 386
             +  N +  +++
Sbjct: 413 EAEGMNGSLQSRD 414

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BLAST of CsGy6G020955 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.5e-33
Identity = 109/365 (29.86%), Postives = 181/365 (49.59%), Query Frame = 0


Query: 21  AKVKWVRDPYLDFAVQREKNLKQVISLKNMIISSPLTSVPLSSFFLLKQNLKVP-TTTIS 80
           A VK  ++   D  +QR+K LK V+ L+N+++S+P   + L      +++L +     + 
Sbjct: 59  AAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLI 118

Query: 81  KFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHNSRPHRDDVVKRLAKLLMLT 140
              + +P VF   +  +      ++T  A  L+ +E  +H         V +L KLLM++
Sbjct: 119 ALLKRFPGVFEVVEEGV-YSLRFRLTPAAERLYLDE--LHLKNESEGLAVTKLRKLLMMS 178

Query: 141 GAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQTLALELLSWRKD 200
              ++ +  I  L+ DLGLP  F  T+   YP+YF+V  +      ++   LEL  W  +
Sbjct: 179 QDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQM------DRGPGLELTHWDPE 238

Query: 201 LAVSELKKRESLEGNFGRRKRN-HIPFPMSF-----PRGFDLQKKVMNWVEEWQDLPYIS 260
           LAVS  +  E        ++RN  I  P+ F     P+G  L +     V +++++PYIS
Sbjct: 239 LAVSAAEVAEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYIS 298

Query: 261 PYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIFCLGDYLGFGSRFKKAIAHH 320
           PY +  HL   S + EK A  V+HE+L LT+ K+T  +++    +   F    +  +  H
Sbjct: 299 PYSDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRH 358

Query: 321 PGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVIRKPRPGIILASSR 379
           P +FYVS K    +V LREAYK   LVEK  L+ ++ + +  +  V R PR G+   S  
Sbjct: 359 PDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEK-MRALVAVPRFPRRGVPATSEE 413

[Close]

BLAST of CsGy6G020955 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.2e-25
Identity = 100/361 (27.70%), Postives = 176/361 (48.75%), Query Frame = 0


Query: 19  IDAKVKWVRDPYLDFAVQREKNLKQVISLKNMIISSPLTSVPLSSFFLLKQNLKV--PTT 78
           I  K   VRD   D  ++ EK +++V+   ++I+S P  ++ +S    L + L +     
Sbjct: 40  IPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQH 99

Query: 79  TISKFFELYPSVFIQFQPSLGLHPHVKITSQAL--LLHKEESTIHNSRPHRDDVVKRLAK 138
               F   +P VF  ++  +    + ++T +AL  + H+ E+ +        D V RL K
Sbjct: 100 EPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQI----PDAVTRLRK 159

Query: 139 LLMLTGAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQT--LALE 198
           L+M++  G++ L  +   + + GLP  F  +++  +P++F++      + GE+T    +E
Sbjct: 160 LVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRL------IDGEETRDKYIE 219

Query: 199 LLSWRKDLAVSELKKRESLEGNFGRRKRNHI--PFPMSFPRGFDLQKKVMNWVEEWQDLP 258
           ++    +L++  +++   +E          +   F ++FP GF + K     V +WQ LP
Sbjct: 220 IVEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLP 279

Query: 259 YISPYENAFHLAPNSDQA----EKWAVAVLHELLYLTISKKTEKENIFCLGDYLGFGSRF 318
           Y SPYE+       S +A    EK +VA +HELL LT+ KK   E I    + +    + 
Sbjct: 280 YWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKL 339

Query: 319 KKAIAHHPGIFYVS---NKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVIRKP 365
           K+ +  H GIFY+S   N  +  TV LRE YK+  LVE + +   R +   L   V+  P
Sbjct: 340 KEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAEL---VLMSP 387

[Close]

BLAST of CsGy6G020955 vs. NCBI nr
Match: XP_008456527.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >KAA0036503.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYJ99978.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 743 bits (1918), Expect = 5.13e-270
Identity = 368/386 (95.34%), Postives = 374/386 (96.89%), Query Frame = 0


Query: 1   MILQITRIPHRFTQIRAFIDAKVKWVRDPYLDFAVQREKNLKQVISLKNMIISSPLTSVP 60
           MILQITRIPHRFTQIRAF+DAKVKWVRDPYLDFAVQREKNLKQVISLKN+IISSPLTSVP
Sbjct: 1   MILQITRIPHRFTQIRAFVDAKVKWVRDPYLDFAVQREKNLKQVISLKNIIISSPLTSVP 60

Query: 61  LSSFFLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120
           LSS  LLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN
Sbjct: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120

Query: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           SRPHRDDVVKRLAKLLMLTGAGKLPLYVIE+LQWDLGLPYRFIPTLLADYP+YFQVCSVK
Sbjct: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYRFIPTLLADYPDYFQVCSVK 180

Query: 181 DCLTGEQTLALELLSWRKDLAVSELKKRESLEGNFGRRKRNHIPFPMSFPRGFDLQKKVM 240
           DCLTGEQTLALELLSWRKDLAVSELKKRE LEGNFG RKRN I FPMSFPRGFDLQKKVM
Sbjct: 181 DCLTGEQTLALELLSWRKDLAVSELKKREYLEGNFGSRKRNRIAFPMSFPRGFDLQKKVM 240

Query: 241 NWVEEWQDLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIFCLGDYL 300
           NWVEEWQ LPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENI+CLGDYL
Sbjct: 241 NWVEEWQHLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIYCLGDYL 300

Query: 301 GFGSRFKKAIAHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVI 360
           GFGSRFKKAI HHPGIFYVSNKIRTQTVVLREAYKKDFL+EKHPLMGMRHQYLHLMNKVI
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYKKDFLLEKHPLMGMRHQYLHLMNKVI 360

Query: 361 RKPRPGIILASSRGKSSNITFANKEV 386
           RKPRPGIILASSRGK  NI  ANKEV
Sbjct: 361 RKPRPGIILASSRGKRRNIALANKEV 386

[Close]

BLAST of CsGy6G020955 vs. NCBI nr
Match: XP_031736564.1 (LOW QUALITY PROTEIN: protein WHAT'S THIS FACTOR 9, mitochondrial [Cucumis sativus])

HSP 1 Score: 726 bits (1875), Expect = 1.83e-263
Identity = 362/386 (93.78%), Postives = 367/386 (95.08%), Query Frame = 0


Query: 1   MILQITRIPHRFTQIRAFIDAKVKWVRDPYLDFAVQREKNLKQVISLKNMIISSPLTSVP 60
           MILQIT IPHRFTQI AFIDAKVKWVRDPYLDFAVQREKNLKQVISLKN+IISSPLTSVP
Sbjct: 1   MILQITIIPHRFTQICAFIDAKVKWVRDPYLDFAVQREKNLKQVISLKNIIISSPLTSVP 60

Query: 61  LSSFFLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120
           LSS FLL QNLKVPTTTISKFFELYP VFIQFQPSLGLHPHVKITSQALLLHKEESTIHN
Sbjct: 61  LSSVFLLNQNLKVPTTTISKFFELYPYVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120

Query: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           SR HRDDVVKRLAKLLML G GK PLYVIERLQWDLGLPYRFIPTLLA YPEYFQVCSV 
Sbjct: 121 SRLHRDDVVKRLAKLLMLIGVGKFPLYVIERLQWDLGLPYRFIPTLLAGYPEYFQVCSVX 180

Query: 181 DCLTGEQTLALELLSWRKDLAVSELKKRESLEGNFGRRKRNHIPFPMSFPRGFDLQKKVM 240
           DCLTGEQTLALELLSWRKDLAVSELKKRESLEGNFGRRK NHIPFPMSFPRGFDLQKKVM
Sbjct: 181 DCLTGEQTLALELLSWRKDLAVSELKKRESLEGNFGRRKINHIPFPMSFPRGFDLQKKVM 240

Query: 241 NWVEEWQDLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIFCLGDYL 300
           NWVEEWQDLPYISPYENAFHLAPN+DQAEKW VAVLHELLYLTISKKTEKENIFCLGDYL
Sbjct: 241 NWVEEWQDLPYISPYENAFHLAPNTDQAEKWVVAVLHELLYLTISKKTEKENIFCLGDYL 300

Query: 301 GFGSRFKKAIAHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVI 360
           GFG RFKKAI HHPGIFYVSNKIRTQTVVLREAY+K FLVEKHPLMGMRH+YLHLMNKVI
Sbjct: 301 GFGYRFKKAIVHHPGIFYVSNKIRTQTVVLREAYRKIFLVEKHPLMGMRHRYLHLMNKVI 360

Query: 361 RKPRPGIILASSRGKSSNITFANKEV 386
           RKPRP +ILASSRGKSSNI  ANKEV
Sbjct: 361 RKPRPDVILASSRGKSSNIALANKEV 386

[Close]

BLAST of CsGy6G020955 vs. NCBI nr
Match: XP_038906250.1 (protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida])

HSP 1 Score: 691 bits (1784), Expect = 1.21e-249
Identity = 337/383 (87.99%), Postives = 358/383 (93.47%), Query Frame = 0


Query: 1   MILQITRIPHRFTQIRAFIDAKVKWVRDPYLDFAVQREKNLKQVISLKNMIISSPLTSVP 60
           M LQITRIPHRF+Q RAF+DAKVKWVRDPYLDFAVQREKNL+QVISLKN+I+SSPL  +P
Sbjct: 1   MFLQITRIPHRFSQTRAFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNIIVSSPLKFLP 60

Query: 61  LSSFFLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120
           LS+  LLKQNLK+PTTTISKFFELYPSVFIQFQPS+G HPHVK+TSQALLLHKEESTIH 
Sbjct: 61  LSNVSLLKQNLKIPTTTISKFFELYPSVFIQFQPSVGFHPHVKLTSQALLLHKEESTIHI 120

Query: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           S+PHRDDVVKRLAKLLMLTGAGKLPLY+IERLQWDLGLPYRFIPTLLADYPEYFQVCSV+
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYIIERLQWDLGLPYRFIPTLLADYPEYFQVCSVR 180

Query: 181 DCLTGEQTLALELLSWRKDLAVSELKKRESLEGNFGRRKRNHIPFPMSFPRGFDLQKKVM 240
           D LTGEQTLALELLSWRKDL+VSELK+RE LEGN G R R+HI F MSFPRGFDLQKKVM
Sbjct: 181 DYLTGEQTLALELLSWRKDLSVSELKRRECLEGNLGSRNRSHIAFRMSFPRGFDLQKKVM 240

Query: 241 NWVEEWQDLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIFCLGDYL 300
           NWVEEWQ LPYISPYENAFHLAPNSDQAEKWAVAVLHELLYL ISKKTEKENIFCLG+YL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLMISKKTEKENIFCLGEYL 300

Query: 301 GFGSRFKKAIAHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVI 360
           GFGSRFKKA+ HHPGIFYVSNKIRTQTVVLREAYKKDFL+EKHPLMG RHQYLHLMNKV+
Sbjct: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYKKDFLIEKHPLMGTRHQYLHLMNKVV 360

Query: 361 RKPRPGIILASSRGKSSNITFAN 383
           R+PRPGIILASSR K     FAN
Sbjct: 361 RRPRPGIILASSRAKRRKTLFAN 383

[Close]

BLAST of CsGy6G020955 vs. NCBI nr
Match: XP_022994938.1 (protein WHAT'S THIS FACTOR 1 [Cucurbita maxima])

HSP 1 Score: 670 bits (1728), Expect = 1.88e-240
Identity = 323/385 (83.90%), Postives = 351/385 (91.17%), Query Frame = 0


Query: 1   MILQITRIPHRFTQIRAFIDAKVKWVRDPYLDFAVQREKNLKQVISLKNMIISSPLTSVP 60
           MIL++TR PHR  Q RAF+DAKVKWVRDPYLDF VQREKNL+QVISLKN+I+SSP  SVP
Sbjct: 1   MILRVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60

Query: 61  LSSFFLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120
           LSS  L++QNLK PTT+ISKFF+LYPSVFIQFQPSLGLHPHVK+TSQ+L LHKEE TIHN
Sbjct: 61  LSSVSLMRQNLKAPTTSISKFFQLYPSVFIQFQPSLGLHPHVKLTSQSLALHKEELTIHN 120

Query: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           S+PHRDD+VKRLAKLLMLTGAGKLPLYVIE+LQWDLGLPY+FIP LLADYPEYFQVCS++
Sbjct: 121 SQPHRDDIVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPALLADYPEYFQVCSMR 180

Query: 181 DCLTGEQTLALELLSWRKDLAVSELKKRESLEGNFGRRKRNHIPFPMSFPRGFDLQKKVM 240
           DC TGEQTLALELLSWR+DL+VSELKKR SLEGN  RR  NHI FPMSFPRGFDL+KKV+
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGNHIAFPMSFPRGFDLEKKVL 240

Query: 241 NWVEEWQDLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIFCLGDYL 300
           NWVEEWQ LPYISPYENAFHLAPNSDQAEKW  AVLHELLYL +SKKTEKENIFCLG+YL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300

Query: 301 GFGSRFKKAIAHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVI 360
           GFGSRFKKAI HHPGIFYVSNKIRTQTVVLREAY K+FLVEKH LMGMRHQY+HLMNK +
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360

Query: 361 RKPRPGIILASSRGKSSNITFANKE 385
           R+PRP IILASSRGK  N   ANKE
Sbjct: 361 RRPRPRIILASSRGKRQNNPSANKE 385

[Close]

BLAST of CsGy6G020955 vs. NCBI nr
Match: XP_022136370.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia])

HSP 1 Score: 667 bits (1722), Expect = 4.88e-240
Identity = 320/385 (83.12%), Postives = 354/385 (91.95%), Query Frame = 0


Query: 1   MILQITRIPHRFTQIRAFIDAKVKWVRDPYLDFAVQREKNLKQVISLKNMIISSPLTSVP 60
           MIL+ TRIP+R +Q R F+DAKVKWVRDPYLDFAVQREKNL+QVISLKN+I+S+P  S+P
Sbjct: 1   MILRSTRIPYRLSQTRGFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNLIVSNPSKSLP 60

Query: 61  LSSFFLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120
           LSS  LLKQNLKVPTTT+SKFF+LYPSVF QFQPS GLHP VK+T QAL LHKEESTIHN
Sbjct: 61  LSSVSLLKQNLKVPTTTVSKFFQLYPSVFTQFQPSPGLHPLVKLTPQALTLHKEESTIHN 120

Query: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           S+PHRDDVVKRLAKLLMLTGAG+LPLYVIERLQWDLGLPY+FIPTLLADYPEYFQVC+V+
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGRLPLYVIERLQWDLGLPYKFIPTLLADYPEYFQVCTVR 180

Query: 181 DCLTGEQTLALELLSWRKDLAVSELKKRESLEGNFGRRKRNHIPFPMSFPRGFDLQKKVM 240
           DC TGEQTLALE+LSWRK+L++SELK+RE  +GN   RK NHI FPMS P+GFD +KKVM
Sbjct: 181 DCSTGEQTLALEILSWRKELSISELKRRECPDGNVWSRKGNHIAFPMSLPQGFDFEKKVM 240

Query: 241 NWVEEWQDLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIFCLGDYL 300
           NWVEEWQ LPYISPYENAFHLAPNSDQAEKW VAVLHELLYL +SKKTEKENIFCLG+YL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTVAVLHELLYLLVSKKTEKENIFCLGEYL 300

Query: 301 GFGSRFKKAIAHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVI 360
           GFGSRFKKA+ HHPGIFYVSNKIRTQTVVLREAY+KDFLVEKHPLMGMRHQY+HLMNKV+
Sbjct: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYRKDFLVEKHPLMGMRHQYIHLMNKVV 360

Query: 361 RKPRPGIILASSRGKSSNITFANKE 385
           R+PRPGIILASSRGK  N  ++NKE
Sbjct: 361 RRPRPGIILASSRGKRQNNPYSNKE 385

[Close]

BLAST of CsGy6G020955 vs. ExPASy TrEMBL
Match: A0A5A7T0U1 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00230 PE=4 SV=1)

HSP 1 Score: 743 bits (1918), Expect = 2.48e-270
Identity = 368/386 (95.34%), Postives = 374/386 (96.89%), Query Frame = 0


Query: 1   MILQITRIPHRFTQIRAFIDAKVKWVRDPYLDFAVQREKNLKQVISLKNMIISSPLTSVP 60
           MILQITRIPHRFTQIRAF+DAKVKWVRDPYLDFAVQREKNLKQVISLKN+IISSPLTSVP
Sbjct: 1   MILQITRIPHRFTQIRAFVDAKVKWVRDPYLDFAVQREKNLKQVISLKNIIISSPLTSVP 60

Query: 61  LSSFFLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120
           LSS  LLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN
Sbjct: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120

Query: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           SRPHRDDVVKRLAKLLMLTGAGKLPLYVIE+LQWDLGLPYRFIPTLLADYP+YFQVCSVK
Sbjct: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYRFIPTLLADYPDYFQVCSVK 180

Query: 181 DCLTGEQTLALELLSWRKDLAVSELKKRESLEGNFGRRKRNHIPFPMSFPRGFDLQKKVM 240
           DCLTGEQTLALELLSWRKDLAVSELKKRE LEGNFG RKRN I FPMSFPRGFDLQKKVM
Sbjct: 181 DCLTGEQTLALELLSWRKDLAVSELKKREYLEGNFGSRKRNRIAFPMSFPRGFDLQKKVM 240

Query: 241 NWVEEWQDLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIFCLGDYL 300
           NWVEEWQ LPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENI+CLGDYL
Sbjct: 241 NWVEEWQHLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIYCLGDYL 300

Query: 301 GFGSRFKKAIAHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVI 360
           GFGSRFKKAI HHPGIFYVSNKIRTQTVVLREAYKKDFL+EKHPLMGMRHQYLHLMNKVI
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYKKDFLLEKHPLMGMRHQYLHLMNKVI 360

Query: 361 RKPRPGIILASSRGKSSNITFANKEV 386
           RKPRPGIILASSRGK  NI  ANKEV
Sbjct: 361 RKPRPGIILASSRGKRRNIALANKEV 386

[Close]

BLAST of CsGy6G020955 vs. ExPASy TrEMBL
Match: A0A1S3C4Q9 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103496453 PE=4 SV=1)

HSP 1 Score: 743 bits (1918), Expect = 2.48e-270
Identity = 368/386 (95.34%), Postives = 374/386 (96.89%), Query Frame = 0


Query: 1   MILQITRIPHRFTQIRAFIDAKVKWVRDPYLDFAVQREKNLKQVISLKNMIISSPLTSVP 60
           MILQITRIPHRFTQIRAF+DAKVKWVRDPYLDFAVQREKNLKQVISLKN+IISSPLTSVP
Sbjct: 1   MILQITRIPHRFTQIRAFVDAKVKWVRDPYLDFAVQREKNLKQVISLKNIIISSPLTSVP 60

Query: 61  LSSFFLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120
           LSS  LLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN
Sbjct: 61  LSSVSLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120

Query: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           SRPHRDDVVKRLAKLLMLTGAGKLPLYVIE+LQWDLGLPYRFIPTLLADYP+YFQVCSVK
Sbjct: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYRFIPTLLADYPDYFQVCSVK 180

Query: 181 DCLTGEQTLALELLSWRKDLAVSELKKRESLEGNFGRRKRNHIPFPMSFPRGFDLQKKVM 240
           DCLTGEQTLALELLSWRKDLAVSELKKRE LEGNFG RKRN I FPMSFPRGFDLQKKVM
Sbjct: 181 DCLTGEQTLALELLSWRKDLAVSELKKREYLEGNFGSRKRNRIAFPMSFPRGFDLQKKVM 240

Query: 241 NWVEEWQDLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIFCLGDYL 300
           NWVEEWQ LPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENI+CLGDYL
Sbjct: 241 NWVEEWQHLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIYCLGDYL 300

Query: 301 GFGSRFKKAIAHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVI 360
           GFGSRFKKAI HHPGIFYVSNKIRTQTVVLREAYKKDFL+EKHPLMGMRHQYLHLMNKVI
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYKKDFLLEKHPLMGMRHQYLHLMNKVI 360

Query: 361 RKPRPGIILASSRGKSSNITFANKEV 386
           RKPRPGIILASSRGK  NI  ANKEV
Sbjct: 361 RKPRPGIILASSRGKRRNIALANKEV 386

[Close]

BLAST of CsGy6G020955 vs. ExPASy TrEMBL
Match: A0A6J1K6G9 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111490493 PE=4 SV=1)

HSP 1 Score: 670 bits (1728), Expect = 9.09e-241
Identity = 323/385 (83.90%), Postives = 351/385 (91.17%), Query Frame = 0


Query: 1   MILQITRIPHRFTQIRAFIDAKVKWVRDPYLDFAVQREKNLKQVISLKNMIISSPLTSVP 60
           MIL++TR PHR  Q RAF+DAKVKWVRDPYLDF VQREKNL+QVISLKN+I+SSP  SVP
Sbjct: 1   MILRVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREKNLRQVISLKNLIVSSPFKSVP 60

Query: 61  LSSFFLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120
           LSS  L++QNLK PTT+ISKFF+LYPSVFIQFQPSLGLHPHVK+TSQ+L LHKEE TIHN
Sbjct: 61  LSSVSLMRQNLKAPTTSISKFFQLYPSVFIQFQPSLGLHPHVKLTSQSLALHKEELTIHN 120

Query: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           S+PHRDD+VKRLAKLLMLTGAGKLPLYVIE+LQWDLGLPY+FIP LLADYPEYFQVCS++
Sbjct: 121 SQPHRDDIVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPALLADYPEYFQVCSMR 180

Query: 181 DCLTGEQTLALELLSWRKDLAVSELKKRESLEGNFGRRKRNHIPFPMSFPRGFDLQKKVM 240
           DC TGEQTLALELLSWR+DL+VSELKKR SLEGN  RR  NHI FPMSFPRGFDL+KKV+
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGNHIAFPMSFPRGFDLEKKVL 240

Query: 241 NWVEEWQDLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIFCLGDYL 300
           NWVEEWQ LPYISPYENAFHLAPNSDQAEKW  AVLHELLYL +SKKTEKENIFCLG+YL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENIFCLGEYL 300

Query: 301 GFGSRFKKAIAHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVI 360
           GFGSRFKKAI HHPGIFYVSNKIRTQTVVLREAY K+FLVEKH LMGMRHQY+HLMNK +
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIHLMNKAV 360

Query: 361 RKPRPGIILASSRGKSSNITFANKE 385
           R+PRP IILASSRGK  N   ANKE
Sbjct: 361 RRPRPRIILASSRGKRQNNPSANKE 385

[Close]

BLAST of CsGy6G020955 vs. ExPASy TrEMBL
Match: A0A6J1C3P8 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC111008095 PE=4 SV=1)

HSP 1 Score: 667 bits (1722), Expect = 2.36e-240
Identity = 320/385 (83.12%), Postives = 354/385 (91.95%), Query Frame = 0


Query: 1   MILQITRIPHRFTQIRAFIDAKVKWVRDPYLDFAVQREKNLKQVISLKNMIISSPLTSVP 60
           MIL+ TRIP+R +Q R F+DAKVKWVRDPYLDFAVQREKNL+QVISLKN+I+S+P  S+P
Sbjct: 1   MILRSTRIPYRLSQTRGFVDAKVKWVRDPYLDFAVQREKNLRQVISLKNLIVSNPSKSLP 60

Query: 61  LSSFFLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120
           LSS  LLKQNLKVPTTT+SKFF+LYPSVF QFQPS GLHP VK+T QAL LHKEESTIHN
Sbjct: 61  LSSVSLLKQNLKVPTTTVSKFFQLYPSVFTQFQPSPGLHPLVKLTPQALTLHKEESTIHN 120

Query: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           S+PHRDDVVKRLAKLLMLTGAG+LPLYVIERLQWDLGLPY+FIPTLLADYPEYFQVC+V+
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGRLPLYVIERLQWDLGLPYKFIPTLLADYPEYFQVCTVR 180

Query: 181 DCLTGEQTLALELLSWRKDLAVSELKKRESLEGNFGRRKRNHIPFPMSFPRGFDLQKKVM 240
           DC TGEQTLALE+LSWRK+L++SELK+RE  +GN   RK NHI FPMS P+GFD +KKVM
Sbjct: 181 DCSTGEQTLALEILSWRKELSISELKRRECPDGNVWSRKGNHIAFPMSLPQGFDFEKKVM 240

Query: 241 NWVEEWQDLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIFCLGDYL 300
           NWVEEWQ LPYISPYENAFHLAPNSDQAEKW VAVLHELLYL +SKKTEKENIFCLG+YL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTVAVLHELLYLLVSKKTEKENIFCLGEYL 300

Query: 301 GFGSRFKKAIAHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVI 360
           GFGSRFKKA+ HHPGIFYVSNKIRTQTVVLREAY+KDFLVEKHPLMGMRHQY+HLMNKV+
Sbjct: 301 GFGSRFKKALVHHPGIFYVSNKIRTQTVVLREAYRKDFLVEKHPLMGMRHQYIHLMNKVV 360

Query: 361 RKPRPGIILASSRGKSSNITFANKE 385
           R+PRPGIILASSRGK  N  ++NKE
Sbjct: 361 RRPRPGIILASSRGKRQNNPYSNKE 385

[Close]

BLAST of CsGy6G020955 vs. ExPASy TrEMBL
Match: A0A6J1FNW3 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111447163 PE=4 SV=1)

HSP 1 Score: 661 bits (1705), Expect = 2.89e-237
Identity = 323/385 (83.90%), Postives = 348/385 (90.39%), Query Frame = 0


Query: 1   MILQITRIPHRFTQIRAFIDAKVKWVRDPYLDFAVQREKNLKQVISLKNMIISSPLTSVP 60
           MIL +TR PHR  Q RAF+DAKVKWVRDPYLDF VQRE+NL+QVISLKN+I+SSP  SVP
Sbjct: 1   MILGVTRAPHRLCQTRAFVDAKVKWVRDPYLDFVVQREENLRQVISLKNLIVSSPFKSVP 60

Query: 61  LSSFFLLKQNLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTIHN 120
           LSS  L++QNLKVPTT+ISKF +LYPSVFIQFQPSLGLHPHVK+TSQAL LHKEESTIHN
Sbjct: 61  LSSVSLMRQNLKVPTTSISKFLQLYPSVFIQFQPSLGLHPHVKLTSQALALHKEESTIHN 120

Query: 121 SRPHRDDVVKRLAKLLMLTGAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVK 180
           S+PHRDDVVKRLAKLLMLTGAGKLPLYVIE+LQWDLGLPY+FIPTLLADYPEYFQVCSV+
Sbjct: 121 SQPHRDDVVKRLAKLLMLTGAGKLPLYVIEKLQWDLGLPYKFIPTLLADYPEYFQVCSVR 180

Query: 181 DCLTGEQTLALELLSWRKDLAVSELKKRESLEGNFGRRKRNHIPFPMSFPRGFDLQKKVM 240
           DC TGEQTLALELLSWR+DL+VSELKKR SLEGN  RR   HI FPMSFPRGFDL+KKV+
Sbjct: 181 DCSTGEQTLALELLSWREDLSVSELKKRHSLEGNGWRRNGIHIAFPMSFPRGFDLEKKVL 240

Query: 241 NWVEEWQDLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIFCLGDYL 300
           NWVEEWQ LPYISPYENAFHLAPNSDQAEKW  AVLHELLYL +SKKTEKENI CLG+YL
Sbjct: 241 NWVEEWQRLPYISPYENAFHLAPNSDQAEKWTTAVLHELLYLMVSKKTEKENISCLGEYL 300

Query: 301 GFGSRFKKAIAHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKVI 360
           GFGSRFKKAI HHPGIFYVSNKIRTQTVVLREAY K+FLVEKH LMGMRHQY+ LMNK +
Sbjct: 301 GFGSRFKKAIVHHPGIFYVSNKIRTQTVVLREAYNKNFLVEKHLLMGMRHQYIRLMNKAV 360

Query: 361 RKPRPGIILASSRGKSSNITFANKE 385
           R+PRP IILASSR K  N   ANKE
Sbjct: 361 RRPRPRIILASSRDKRQNNPSANKE 385

[Close]

BLAST of CsGy6G020955 vs. TAIR 10
Match: AT4G24320.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 442.2 bits (1136), Expect = 4.3e-124
Identity = 223/360 (61.94%), Postives = 276/360 (76.67%), Query Frame = 0


Query: 1   MILQITRIPHRFTQIRAFIDAKVKWVRDPYLDFAVQREKNLKQVISLKNMIISSPLTSVP 60
           M    T++     Q R F++A+VKWV D YLD AVQREKNLKQVISLK+ I+SSP  S+P
Sbjct: 1   MAAATTKLARALQQRRTFVNARVKWVSDHYLDEAVQREKNLKQVISLKDRIVSSPSKSLP 60

Query: 61  LSSFFLLKQ--NLKVPTTTISKFFELYPSVFIQFQPSLGLHPHVKITSQALLLHKEESTI 120
           LSS  LLK   NL +   T + FF+ YPSVF  FQPS     HV++T QAL LHKEE TI
Sbjct: 61  LSSLSLLKPLVNLHI---TAAAFFQKYPSVFTTFQPSPSHPLHVRLTPQALTLHKEEETI 120

Query: 121 HNSRPHRDDVVKRLAKLLMLTGAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYFQVCS 180
           H S P R+  V+RL K LMLTGAG LPLYV++R ++DLGLP  +I +L+ DYPEYF+V  
Sbjct: 121 HLSPPQRNVTVQRLTKFLMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTE 180

Query: 181 VKDCLTGEQTLALELLSWRKDLAVSELKKRESLEGNFGRRKRNHIPFPMSFPRGFDLQKK 240
           +KD LTGE+TLAL + S R +L VSE+++RE+       +K   I + M+FP+G++L K+
Sbjct: 181 IKDRLTGEKTLALTISSRRNNLPVSEMERREATIDGSRVKKGLRIRYSMNFPKGYELHKR 240

Query: 241 VMNWVEEWQDLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIFCLGD 300
           V NWVE+WQ+LPYISPYENAFHL   SDQAEKWAVAVLHELL+L +SKKTE +N+ CLG+
Sbjct: 241 VKNWVEQWQNLPYISPYENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGE 300

Query: 301 YLGFGSRFKKAIAHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNK 359
           YLGFG RFKKA+ HHPGIFY+S+KIRTQTVVLREAY K FL+EKHPLMG+RHQY++LM+K
Sbjct: 301 YLGFGMRFKKALVHHPGIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSK 357

[Close]

BLAST of CsGy6G020955 vs. TAIR 10
Match: AT1G71850.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 300.1 bits (767), Expect = 2.6e-81
Identity = 152/351 (43.30%), Postives = 231/351 (65.81%), Query Frame = 0


Query: 10  HRFTQIRAFIDAKVKWVRDPYLDFAVQREKNLKQVISLKNMIISSPLTSVPLSSFFLLKQ 69
           HR     + ++   K+VRD  LD AV+REKNL+ ++S+K++I S P  SVP+S     K 
Sbjct: 16  HRTFADTSAVEDTYKFVRDRGLDHAVEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKD 75

Query: 70  NLKVPTTTISKFFELYPSVFIQFQP-SLGLHPHVKITSQALLLHKEESTIHNSRPHRDDV 129
           +L+VP   I +F   +PSVF +F P  +G+HPH+ +T + L    +E  ++ S  ++  +
Sbjct: 76  SLRVPLRPI-EFIRSFPSVFQEFLPGGIGIHPHISLTPEILNHDADEQLVYGSETYKQGL 135

Query: 130 VKRLAKLLMLTGAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQT 189
             RL KLLM+    K+PL +++ L+WDLGLP  ++ T++ ++P+YF+V  +K  L G  +
Sbjct: 136 ADRLLKLLMINRINKIPLEILDLLKWDLGLPKDYVETMVPEFPDYFRV--IKSKLRG-CS 195

Query: 190 LALELLSWRKDLAVSELKKRESLEGNFGRRKRNHIPFPMSFPRGFDLQKKVMNWVEEWQD 249
             LEL+ W  + AVS L+K+          K + I FPM F  GF + KK+  W+++WQ 
Sbjct: 196 GELELVCWSNEHAVSVLEKKARTLRKGEYTKGSAIAFPMKFSNGFVVDKKMKKWIDDWQK 255

Query: 250 LPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIFCLGDYLGFGSRFKK 309
           LPYISPYENA HL+  SD+++KWA AVLHE++ L +SKK EK+ I  LG+++G  SRFK+
Sbjct: 256 LPYISPYENALHLSATSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMGLRSRFKR 315

Query: 310 AIAHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNKV 360
            + +HPGIFY+S+K+RT TVVLR+ YK+  L+E + L+  R++Y+ LMN V
Sbjct: 316 VLHNHPGIFYLSSKLRTHTVVLRDGYKRGMLIESNELVTSRNRYMKLMNTV 362

[Close]

BLAST of CsGy6G020955 vs. TAIR 10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 246.1 bits (627), Expect = 4.5e-65
Identity = 141/351 (40.17%), Postives = 212/351 (60.40%), Query Frame = 0


Query: 12  FTQIRAFIDAKVKWVRDPYLDFAVQREKNLKQVISLKNMIISSPLTSVPLSSFFLLKQNL 71
           + Q    ++ K+KWV+D  LD  V REK+L+ V +L ++I +SP   +P+      +  L
Sbjct: 26  YQQRCGLVNVKLKWVKDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQL 85

Query: 72  KVP-TTTISKFFELYPSVFIQ--FQPSLGLH-PHVKITSQALLLHKEESTIHNSRPHRDD 131
            +P    +S F   YP++F++  +  S G   P   +T + + L+ EE  +  SR +  D
Sbjct: 86  GLPQELKLSAFIRRYPNIFVEHCYWDSAGTSVPCFGLTRETIDLYYEEVDV--SRVNERD 145

Query: 132 VVKRLAKLLMLTGAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYFQVCSVKDCLTGEQ 191
           V+ RL KLLMLT    L L+ I+ L+WDLGLPY +  +L+  +P+ F +  +   L G  
Sbjct: 146 VLVRLCKLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDG-- 205

Query: 192 TLALELLSWRKDLAVSELKKRESLEGNFGRRKRNHIPFPMSFPRGFDLQKKVMNWVEEWQ 251
              L+L+ W + LAVS+++ RE + GN  R     + FP+ F RGF L++K + W++EWQ
Sbjct: 206 ---LKLIHWDEHLAVSQMQLREDV-GNDER-----MAFPVKFTRGFGLKRKSIEWLQEWQ 265

Query: 252 DLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKTEKENIFCLGDYLGFGSRFK 311
            LPY SPY +A HL P +D +EK  V V HELL+LTI KKTE++N+  L        +F 
Sbjct: 266 RLPYTSPYVDASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFT 325

Query: 312 KAIAHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGMRHQYLHLMNK 359
           K    HPGIFY+S K  TQTV+LREAY +  L+EKHPL+ +R ++ ++MN+
Sbjct: 326 KVFERHPGIFYISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMNE 363

[Close]

BLAST of CsGy6G020955 vs. TAIR 10
Match: AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 220.7 bits (561), Expect = 2.0e-57
Identity = 137/371 (36.93%), Postives = 209/371 (56.33%), Query Frame = 0


Query: 2   ILQITRIPHRFTQIR---AFIDAKVKWVRDPYLDFAVQREKNLKQVISLKNMIISSP--- 61
           +  ++++ H+  Q R   A    ++KWV++  LD  +  E +LK    LK+ I  SP   
Sbjct: 9   LFSVSKLFHQHQQWRGMGAMTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGF 68

Query: 62  LTSVPLSSFFLLKQNLKVPTTTISKFFELYPSVFIQF-QPSLGLHPHVKITSQALLLHKE 121
           LT+  ++ +    Q L   T  + +F   YP++F +F        P  K+T  AL+L  +
Sbjct: 69  LTAKSVADW----QKLLGLTVPVLRFLRRYPTLFHEFPHARYASLPCFKLTDTALMLDSQ 128

Query: 122 ESTIHNSRPHRDDVVKRLAKLLMLTGAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYF 181
           E  IH S  H  D V+RL ++LM+  +  + L  +  L++DLGLP  +  TL+  YP++F
Sbjct: 129 EEIIHQS--HEADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHF 188

Query: 182 QVCSVKDCLTGEQTLALELLSWRKDLAVSELKKR---------ESLEGNFGRRKRNHIPF 241
             C VK          L+L+ WR + A S L+KR         ES    F +R ++ + F
Sbjct: 189 --CFVK---ASNGNPCLKLVKWRDEFAFSALQKRNEDNDVSGEESRYREF-KRGQSTLTF 248

Query: 242 PMSFPRGFDLQKKVMNWVEEWQDLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTIS 301
           PMSFPRG+  QKKV  W++E+Q LPYISPY++  ++ P SD  EK AVAVLHELL LTI 
Sbjct: 249 PMSFPRGYGAQKKVKAWMDEFQKLPYISPYDDPSNIDPESDLMEKRAVAVLHELLSLTIH 308

Query: 302 KKTEKENIFCLGDYLGFGSRFKKAIAHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPL 357
           KKT++  +  +   L    +F +    +PGIFY+S K +T TV+L+E Y++  LV+ HPL
Sbjct: 309 KKTKRNYLRSMRAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPL 367

[Close]

BLAST of CsGy6G020955 vs. TAIR 10
Match: AT3G58520.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 213.4 bits (542), Expect = 3.3e-55
Identity = 134/368 (36.41%), Postives = 203/368 (55.16%), Query Frame = 0


Query: 2   ILQITRIPHRFTQIR---AFIDAKVKWVRDPYLDFAVQREKNLKQVISLKNMIISSPLTS 61
           +  ++++ H+  Q R   A    ++KWV++  LD  +  E +LK    LK+ I  SP T 
Sbjct: 9   LFSVSKLFHQHQQWRGMGAMTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSP-TG 68

Query: 62  VPLSSFFLLKQNLKVPTTTISKFFELYPSVFIQF-QPSLGLHPHVKITSQALLLHKEEST 121
           + +   F    N +            YP++F +F        P  K+T  AL+L  +E  
Sbjct: 69  ITIRENFNCYWNKR------------YPTLFHEFPHARYASLPCFKLTDTALMLDSQEEI 128

Query: 122 IHNSRPHRDDVVKRLAKLLMLTGAGKLPLYVIERLQWDLGLPYRFIPTLLADYPEYFQVC 181
           IH S  H  D V+RL ++LM+  +  + L  +  L++DLGLP  +  TL+  YP++F  C
Sbjct: 129 IHQS--HEADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHF--C 188

Query: 182 SVKDCLTGEQTLALELLSWRKDLAVSELKKR---------ESLEGNFGRRKRNHIPFPMS 241
            VK          L+L+ WR + A S L+KR         ES    F +R ++ + FPMS
Sbjct: 189 FVK---ASNGNPCLKLVKWRDEFAFSALQKRNEDNDVSGEESRYREF-KRGQSTLTFPMS 248

Query: 242 FPRGFDLQKKVMNWVEEWQDLPYISPYENAFHLAPNSDQAEKWAVAVLHELLYLTISKKT 301
           FPRG+  QKKV  W++E+Q LPYISPY++  ++ P SD  EK AVAVLHELL LTI KKT
Sbjct: 249 FPRGYGAQKKVKAWMDEFQKLPYISPYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKT 308

Query: 302 EKENIFCLGDYLGFGSRFKKAIAHHPGIFYVSNKIRTQTVVLREAYKKDFLVEKHPLMGM 357
           ++  +  +   L    +F +    +PGIFY+S K +T TV+L+E Y++  LV+ HPL  +
Sbjct: 309 KRNYLRSMRAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRL 355

The following BLAST results are available for this feature:

BLAST of CsGy6G020955 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUZ6	1.5e-49	33.89	Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W...	[more]
A0MFS5	1.4e-34	31.93	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
B6TTV8	3.4e-33	28.95	Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=...	[more]
Q65XL5	4.5e-33	29.86	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
Q689D6	1.2e-25	27.70	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]

BLAST of CsGy6G020955 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456527.1	5.13e-270	95.34	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >KAA0036503.1 prot...	[more]
XP_031736564.1	1.83e-263	93.78	LOW QUALITY PROTEIN: protein WHAT'S THIS FACTOR 9, mitochondrial [Cucumis sativu...	[more]
XP_038906250.1	1.21e-249	87.99	protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida]	[more]
XP_022994938.1	1.88e-240	83.90	protein WHAT'S THIS FACTOR 1 [Cucurbita maxima]	[more]
XP_022136370.1	4.88e-240	83.12	protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia]	[more]

BLAST of CsGy6G020955 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T0U1	2.48e-270	95.34	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3C4Q9	2.48e-270	95.34	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103496453 PE=4...	[more]
A0A6J1K6G9	9.09e-241	83.90	protein WHAT'S THIS FACTOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111490493 PE=4 SV...	[more]
A0A6J1C3P8	2.36e-240	83.12	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC1110080...	[more]
A0A6J1FNW3	2.89e-237	83.90	protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111447163 PE=4 ...	[more]

BLAST of CsGy6G020955 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24320.1	4.3e-124	61.94	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT1G71850.1	2.6e-81	43.30	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G48040.1	4.5e-65	40.17	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G58520.1	2.0e-57	36.93	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G58520.2	3.3e-55	36.41	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 26..358 e-value: 7.0E-110 score: 367.0
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 3..367
None	No IPR available	PANTHER	PTHR31476:SF19	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN	coord: 3..367

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G020955.1	CsGy6G020955.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding