CsGy6G020520 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G020520
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	AP2-like ethylene-responsive transcription factor
Location	Gy14Chr6: 21259228 .. 21261720 (+)
RNA-Seq Expression	CsGy6G020520
Synteny	CsGy6G020520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCGTCAAGGGGGTCAAGAGACGGCGGAGAAATGCTTCTTCTTCCTCCCCCACAGTCGTTGGTGGTGGTGGAGATGGTCAACCACACAAGTTAATGCCAAATCAATCCACTGCCACAAAGAGAAGCTCAAAGTTTCGTGGAGTTAGCAGGTACTCATTCACAATACTTGCACAATTTTTAATTTTCTTCTTCTTTAATTATTCTCTGACTTCTCTTTTTATGTATTTAATTTAAATTCTTTTATGGTTTTTTTTATTTAGTGAAAATTTTAAAAGGTTTGAATTGAGTTGGAGAATGTTGATACCATAAAATTATGATTTATCCTTGAGAATAAACAAATCGAAAATAAACAGACACCGATGGACAGGACGATTTGAAGCTCATTTATGGGACAAAGGTTCTTGGAATCCAACCCAAAGGAAGAAAGGAAAACAAGGTAAATAAATGGAGAAAAGAAAAAAAAAAGAACTATTTAATTTTCATATATTTGGTGTTTGTGGAAGAATGGCAAGTTAATTAAAGCTCATAATTTTGACTTGTTTGTGTTATATTGTGATATGTGATGATGAATGATGATGAACTCATTGGTGACATTGTAATAAATGGAGCAGTTTATTTAGGTATGTTTTGTTAATATAACAAATTAAATTGTAAATACATATCATAAAGTATAAAATCAAAGTATATGATGATGTGTGTTTAAATGAAAACAGGAGCTTATGATGAAGAAGAATCAGCCGCTAGAGCATATGACTTGGCTGCACTTAAGTACTGGGGAACATCCACTTTCACTAATTTTTCGGTACCCTTTTCATTATTATTCTATTTGCTCCACTAATTATCATTAGTTGTTAATTAACTTCTTCACACAATCAATTAAGAGTACTTAAAAAGTCCACATTTTCATAGTCTTAAAAACTAGCTGATCATAACAATAACAATTAATTCTAAAAAACTATATAAGAAATGAGAAATTTCAACAATTTCAACGAGCCAACCTTGCTATTTGAACGCAAGCATTACAAATTCAACAAACTTAATTTATCACCTCAAACACAACTACAACATTTATAGTAATTCTAATTCTAGACAACAACGAATCTCATTGTAAATCAATTTTTTAGTTACATCGATTTCATTCAAATGACTCTATAGAAGATCACTCAAACTGCGGCCACATCTCATCACACAAGTATTATTAATTATGTGTATCAATTGCAAAACCTTAGGGCAACAAACGGGCTTAGTTGTCCCTAAATTTCACCGATATGTATGCTTACTTGCTAAAACGTGACTACTATTTGAATTATTTCTTTTACCTAAGTTAATAAAATATGTCATCAACTTTAATTTATTGTAGAGTGTGTGTGAAAACTACTTTTAAACTTTTACAAAGATTTTGAAAATATTTTTTATCGTTAGTTTTGAATAACGAAACTTTGAAAGTTCAAAGAAGTATTCTTAAACTAAAAAAAAAGAATAACCCTAAATTAAAAAAGAAGTTAAAGAAATATTTCAATCCTTAATTCCGTGATAAATATGATTGAAGTTCCTTTAAGCAAAAAAAAAAGTCAATTTTAAAATAATTTATATAAACACTTTCATTTTCTCCTATTTTTCAAATTCTATCAAATATATCCAAACTTAAACCTAAATTAATGCAAAATTCGAGTATCAGAATCTCCTACGTGGAACTTTGTTCAAACATTTAAGTTCTAAAATTTTTCGATGCTTCCATTATTGTTCTTTTTAGTTTATATACCTTGATTTGGAATGTACATTTTTTTTTCTTATCGAGATAAACACACATGCCAAATGGTTTAAAAAATAGAGTAAAAGGGTATCGTAGAAGTAGAAGAGAATAAAGAGAAAATTGAGAAGTAAGAATGATATTAACCATTTATGTTCGGATAATCGTAAGTGTAATTTTTAAAGGAAAATTTTGACACAGGACTAAAATGGCATCATCCAAAACTAACCATAACCATATTTTTCAATATTCAATTGAAATTAACGTAAATATTTAATTAGATATGAATAATTTAATTATATAAGATAATATAAATTAAAATATTCAATTGTGTGTGTGTGAAAATTTTAAAACAGTTAAGGAAATTGAAAATTGAAAAAGGAAACTAGTTTAAGCCATGATTTAATTATCTGATTTGTTCATATAGTAATTGCTGATTATTTTGTGCAGATATCTGATTATGAGAATGAGATTAAGATAATGAAAACTGTGACAAAAGAGGAATACTTGGCCTCTTTAAGAAGGTAATTAATTTTCCATACTTTTTATCTTACATTTTGTTTCATTACCATATGATTTCTAATTTTAATTTTTGCAAATTAAACAATATTAATCATTCTACAACGTTGCAAAAGTTTAGCTTTATGTTTTGGCTTCATTCATTCTTACTAGGAGAAGTAGCGGTTTCTCGAGAGGTGTATCAAGATATCGAGGAGTCGCGAGGTAATGCCACTTAG

mRNA sequence

ATGGCCGCCGTCAAGGGGGTCAAGAGACGGCGGAGAAATGCTTCTTCTTCCTCCCCCACAGTCGTTGGTGGTGGTGGAGATGGTCAACCACACAAGTTAATGCCAAATCAATCCACTGCCACAAAGAGAAGCTCAAAGTTTCGTGGAGTTAGCAGACACCGATGGACAGGACGATTTGAAGCTCATTTATGGGACAAAGGTTCTTGGAATCCAACCCAAAGGAAGAAAGGAAAACAAGGAGCTTATGATGAAGAAGAATCAGCCGCTAGAGCATATGACTTGGCTGCACTTAAGTACTGGGGAACATCCACTTTCACTAATTTTTCGATATCTGATTATGAGAATGAGATTAAGATAATGAAAACTGTGACAAAAGAGGAATACTTGGCCTCTTTAAGAAGCTTTATGTTTTGGCTTCATTCATTCTTACTAGGAGAAGTAGCGGTTTCTCGAGAGGTGTATCAAGATATCGAGGAGTCGCGAGGTAATGCCACTTAG

Coding sequence (CDS)

ATGGCCGCCGTCAAGGGGGTCAAGAGACGGCGGAGAAATGCTTCTTCTTCCTCCCCCACAGTCGTTGGTGGTGGTGGAGATGGTCAACCACACAAGTTAATGCCAAATCAATCCACTGCCACAAAGAGAAGCTCAAAGTTTCGTGGAGTTAGCAGACACCGATGGACAGGACGATTTGAAGCTCATTTATGGGACAAAGGTTCTTGGAATCCAACCCAAAGGAAGAAAGGAAAACAAGGAGCTTATGATGAAGAAGAATCAGCCGCTAGAGCATATGACTTGGCTGCACTTAAGTACTGGGGAACATCCACTTTCACTAATTTTTCGATATCTGATTATGAGAATGAGATTAAGATAATGAAAACTGTGACAAAAGAGGAATACTTGGCCTCTTTAAGAAGCTTTATGTTTTGGCTTCATTCATTCTTACTAGGAGAAGTAGCGGTTTCTCGAGAGGTGTATCAAGATATCGAGGAGTCGCGAGGTAATGCCACTTAG

Protein sequence

MAAVKGVKRRRRNASSSSPTVVGGGGDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLRSFMFWLHSFLLGEVAVSREVYQDIEESRGNAT*

Homology

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BLAST of CsGy6G020520 vs. ExPASy Swiss-Prot
Match: Q8GWK2 (AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thaliana OX=3702 GN=At2g41710 PE=1 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 1.6e-32
Identity = 66/102 (64.71%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 39  TATKRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLA 98
           TA KRSS +RGV+RHRWTGR+EAHLWDK +WN  Q KKGKQ   GAYD+EE+AARAYDLA
Sbjct: 63  TAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLA 122

Query: 99  ALKYWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLRSFMF 138
           ALKYWG  T  NF ++DY  +++ M+ +++EEYLASLR + F
Sbjct: 123 ALKYWGPGTLINFPVTDYTRDLEEMQNLSREEYLASLRRYPF 164

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BLAST of CsGy6G020520 vs. ExPASy Swiss-Prot
Match: Q6X5Y6 (Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana OX=3702 GN=WRI1 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-31
Identity = 75/128 (58.59%), Postives = 87/128 (67.97%), Query Frame = 0


Query: 9   RRRRNASSSSPTVVGGGGDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEAHLWDKGS 68
           +R + A  SSP+     GD + H   P    +T+RSS +RGV+RHRWTGRFEAHLWDK S
Sbjct: 36  KRAKRAKKSSPS-----GD-KSHN--PTSPASTRRSSIYRGVTRHRWTGRFEAHLWDKSS 95

Query: 69  WNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKIMKTVTK 128
           WN  Q KKGKQ   GAYD EE+AA  YDLAALKYWG  T  NF    Y  E++ M+ VTK
Sbjct: 96  WNSIQNKKGKQVYLGAYDSEEAAAHTYDLAALKYWGPDTILNFPAETYTKELEEMQRVTK 155

Query: 129 EEYLASLR 134
           EEYLASLR
Sbjct: 156 EEYLASLR 155

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BLAST of CsGy6G020520 vs. ExPASy Swiss-Prot
Match: A0JPZ8 (AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thaliana OX=3702 GN=At1g79700 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.0e-31
Identity = 64/102 (62.75%), Postives = 79/102 (77.45%), Query Frame = 0


Query: 35  PNQSTATKRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARA 94
           P ++   +RSS +RGV+RHRWTGR+EAHLWDK SWN TQ KKG+Q   GAYDEEE+AARA
Sbjct: 41  PPRNAPLQRSSPYRGVTRHRWTGRYEAHLWDKNSWNDTQTKKGRQVYLGAYDEEEAAARA 100

Query: 95  YDLAALKYWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLR 134
           YDLAALKYWG  T  NF +  Y+ ++K M+  +KEEY+ SLR
Sbjct: 101 YDLAALKYWGRDTLLNFPLPSYDEDVKEMEGQSKEEYIGSLR 142

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BLAST of CsGy6G020520 vs. ExPASy Swiss-Prot
Match: X5HYT8 (AP2-like ethylene-responsive transcription factor SMOS1 OS=Oryza sativa subsp. japonica OX=39947 GN=SMOS1 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.0e-31
Identity = 64/97 (65.98%), Postives = 78/97 (80.41%), Query Frame = 0


Query: 40  ATKRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAA 99
           A KRSS +RGV+RHRWTGR+EAHLWDK +WN  Q KKGKQ   GAYD+EE+AARAYDLAA
Sbjct: 83  AGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAA 142

Query: 100 LKYWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLR 134
           LKYWG  T  NF +SDY  +++ M+ ++KE+YL SLR
Sbjct: 143 LKYWGAGTQINFPVSDYARDLEEMQMISKEDYLVSLR 179

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BLAST of CsGy6G020520 vs. ExPASy Swiss-Prot
Match: Q94AN4 (AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thaliana OX=3702 GN=At1g16060 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.5e-30
Identity = 64/95 (67.37%), Postives = 77/95 (81.05%), Query Frame = 0


Query: 42  KRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALK 101
           +RSS  RGV+RHRWTGR+EAHLWDK SWN TQ KKG+Q   GAYDEE++AARAYDLAALK
Sbjct: 54  QRSSVHRGVTRHRWTGRYEAHLWDKNSWNETQTKKGRQVYLGAYDEEDAAARAYDLAALK 113

Query: 102 YWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLR 134
           YWG  T  NF + +YE +IK M++ +KEEY+ SLR
Sbjct: 114 YWGRDTILNFPLCNYEEDIKEMESQSKEEYIGSLR 148

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BLAST of CsGy6G020520 vs. NCBI nr
Match: KAE8647297.1 (hypothetical protein Csa_004348 [Cucumis sativus])

HSP 1 Score: 326 bits (835), Expect = 2.44e-112
Identity = 163/165 (98.79%), Postives = 164/165 (99.39%), Query Frame = 0


Query: 1   MAAVKGVKRRRRNASSSSPTVVGGGGDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFE 60
           MAAVKGVKRRRRNASSSSPT VGGGGDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFE
Sbjct: 1   MAAVKGVKRRRRNASSSSPT-VGGGGDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFE 60

Query: 61  AHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKIM 120
           AHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKIM
Sbjct: 61  AHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKIM 120

Query: 121 KTVTKEEYLASLRSFMFWLHSFLLGEVAVSREVYQDIEESRGNAT 165
           KTVTKEEYLASLRSFMFWLHSFLLGEVAVSREVYQDIEES+GNAT
Sbjct: 121 KTVTKEEYLASLRSFMFWLHSFLLGEVAVSREVYQDIEESQGNAT 164

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BLAST of CsGy6G020520 vs. NCBI nr
Match: KAA0036452.1 (AP2-like ethylene-responsive transcription factor [Cucumis melo var. makuwa] >TYK00034.1 AP2-like ethylene-responsive transcription factor [Cucumis melo var. makuwa])

HSP 1 Score: 253 bits (645), Expect = 1.35e-83
Identity = 127/133 (95.49%), Postives = 127/133 (95.49%), Query Frame = 0


Query: 1   MAAVKGVKRRRRNASSSSPTVVGGGGDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFE 60
           MAAVKGVKRRRRNASSSS   VG GGDGQPHK MPNQSTATKRSSKFRGVSRHRWTGRFE
Sbjct: 1   MAAVKGVKRRRRNASSSS--TVGDGGDGQPHKSMPNQSTATKRSSKFRGVSRHRWTGRFE 60

Query: 61  AHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKIM 120
           AHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNF ISDYENEIKIM
Sbjct: 61  AHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYENEIKIM 120

Query: 121 KTVTKEEYLASLR 133
           KTVTKEEYLASLR
Sbjct: 121 KTVTKEEYLASLR 131

[Close]

BLAST of CsGy6G020520 vs. NCBI nr
Match: XP_031742891.1 (AP2-like ethylene-responsive transcription factor At1g79700 [Cucumis sativus])

HSP 1 Score: 259 bits (662), Expect = 4.40e-83
Identity = 132/136 (97.06%), Postives = 132/136 (97.06%), Query Frame = 0


Query: 1   MAAVKGVKRRRRNASSSSPTVVGGGGDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFE 60
           MAAVKGVKRRRRNASSSSPT VGGGGDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFE
Sbjct: 18  MAAVKGVKRRRRNASSSSPT-VGGGGDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFE 77

Query: 61  AHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEI 120
           AHLWDKGSWNPTQRKKGKQ   GAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEI
Sbjct: 78  AHLWDKGSWNPTQRKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEI 137

Query: 121 KIMKTVTKEEYLASLR 133
           KIMKTVTKEEYLASLR
Sbjct: 138 KIMKTVTKEEYLASLR 152

[Close]

BLAST of CsGy6G020520 vs. NCBI nr
Match: XP_008456799.1 (PREDICTED: AP2-like ethylene-responsive transcription factor At1g79700 [Cucumis melo])

HSP 1 Score: 247 bits (631), Expect = 2.41e-78
Identity = 127/136 (93.38%), Postives = 127/136 (93.38%), Query Frame = 0


Query: 1   MAAVKGVKRRRRNASSSSPTVVGGGGDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFE 60
           MAAVKGVKRRRRNASSSS   VG GGDGQPHK MPNQSTATKRSSKFRGVSRHRWTGRFE
Sbjct: 18  MAAVKGVKRRRRNASSSS--TVGDGGDGQPHKSMPNQSTATKRSSKFRGVSRHRWTGRFE 77

Query: 61  AHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEI 120
           AHLWDKGSWNPTQRKKGKQ   GAYDEEESAARAYDLAALKYWGTSTFTNF ISDYENEI
Sbjct: 78  AHLWDKGSWNPTQRKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYENEI 137

Query: 121 KIMKTVTKEEYLASLR 133
           KIMKTVTKEEYLASLR
Sbjct: 138 KIMKTVTKEEYLASLR 151

[Close]

BLAST of CsGy6G020520 vs. NCBI nr
Match: XP_038885870.1 (AP2-like ethylene-responsive transcription factor At1g16060 [Benincasa hispida])

HSP 1 Score: 223 bits (569), Expect = 2.01e-70
Identity = 114/134 (85.07%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 3   AVKGVKRRRRNASSSSPTVVGGGGDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEAH 62
           AVKG+KRRRR ASSSS     GGGDGQPHK M + STATKRSSKFRGVSRHRWTGRFEAH
Sbjct: 19  AVKGIKRRRRCASSSSTV---GGGDGQPHKSMTDHSTATKRSSKFRGVSRHRWTGRFEAH 78

Query: 63  LWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKI 122
           LWDKG WNPTQRKKGKQ   GAYDEEE AARAYDLAALKYWGTSTFTNF++ DYENEI I
Sbjct: 79  LWDKGYWNPTQRKKGKQVYLGAYDEEELAARAYDLAALKYWGTSTFTNFTVPDYENEINI 138

Query: 123 MKTVTKEEYLASLR 133
           MKTVTKEEYLASLR
Sbjct: 139 MKTVTKEEYLASLR 149

[Close]

BLAST of CsGy6G020520 vs. ExPASy TrEMBL
Match: A0A0A0KJ57 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G404260 PE=4 SV=1)

HSP 1 Score: 265 bits (676), Expect = 1.48e-85
Identity = 132/133 (99.25%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 1   MAAVKGVKRRRRNASSSSPTVVGGGGDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFE 60
           MAAVKGVKRRRRNASSSSPT VGGGGDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFE
Sbjct: 18  MAAVKGVKRRRRNASSSSPT-VGGGGDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFE 77

Query: 61  AHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKIM 120
           AHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKIM
Sbjct: 78  AHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKIM 137

Query: 121 KTVTKEEYLASLR 133
           KTVTKEEYLASLR
Sbjct: 138 KTVTKEEYLASLR 149

[Close]

BLAST of CsGy6G020520 vs. ExPASy TrEMBL
Match: A0A5A7SYZ9 (AP2-like ethylene-responsive transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00790 PE=4 SV=1)

HSP 1 Score: 253 bits (645), Expect = 6.54e-84
Identity = 127/133 (95.49%), Postives = 127/133 (95.49%), Query Frame = 0


Query: 1   MAAVKGVKRRRRNASSSSPTVVGGGGDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFE 60
           MAAVKGVKRRRRNASSSS   VG GGDGQPHK MPNQSTATKRSSKFRGVSRHRWTGRFE
Sbjct: 1   MAAVKGVKRRRRNASSSS--TVGDGGDGQPHKSMPNQSTATKRSSKFRGVSRHRWTGRFE 60

Query: 61  AHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKIM 120
           AHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNF ISDYENEIKIM
Sbjct: 61  AHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYENEIKIM 120

Query: 121 KTVTKEEYLASLR 133
           KTVTKEEYLASLR
Sbjct: 121 KTVTKEEYLASLR 131

[Close]

BLAST of CsGy6G020520 vs. ExPASy TrEMBL
Match: A0A1S3C431 (AP2-like ethylene-responsive transcription factor At1g79700 OS=Cucumis melo OX=3656 GN=LOC103496639 PE=4 SV=1)

HSP 1 Score: 247 bits (631), Expect = 1.16e-78
Identity = 127/136 (93.38%), Postives = 127/136 (93.38%), Query Frame = 0


Query: 1   MAAVKGVKRRRRNASSSSPTVVGGGGDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFE 60
           MAAVKGVKRRRRNASSSS   VG GGDGQPHK MPNQSTATKRSSKFRGVSRHRWTGRFE
Sbjct: 18  MAAVKGVKRRRRNASSSS--TVGDGGDGQPHKSMPNQSTATKRSSKFRGVSRHRWTGRFE 77

Query: 61  AHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEI 120
           AHLWDKGSWNPTQRKKGKQ   GAYDEEESAARAYDLAALKYWGTSTFTNF ISDYENEI
Sbjct: 78  AHLWDKGSWNPTQRKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYENEI 137

Query: 121 KIMKTVTKEEYLASLR 133
           KIMKTVTKEEYLASLR
Sbjct: 138 KIMKTVTKEEYLASLR 151

[Close]

BLAST of CsGy6G020520 vs. ExPASy TrEMBL
Match: A0A6J1DD61 (ethylene-responsive transcription factor WRI1-like OS=Momordica charantia OX=3673 GN=LOC111019289 PE=4 SV=1)

HSP 1 Score: 202 bits (513), Expect = 1.78e-61
Identity = 101/131 (77.10%), Postives = 111/131 (84.73%), Query Frame = 0


Query: 8   KRRRRNASSSSPTVVGGG--GDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEAHLWD 67
           K+RRR ++SSS  + G    GDG  HK   ++ST TKRSS+FRGVSRHRWTGRFEAHLWD
Sbjct: 23  KKRRRRSTSSSTLLEGAATSGDGPRHKSQTDRSTTTKRSSRFRGVSRHRWTGRFEAHLWD 82

Query: 68  KGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKIMKT 127
           KGSWNPTQRKKGKQ   GAYDEEESAARAYDLAALKYWGTSTFTNF  SDYE E++IMKT
Sbjct: 83  KGSWNPTQRKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFPTSDYEEEVRIMKT 142

Query: 128 VTKEEYLASLR 133
           +TKEEYLASLR
Sbjct: 143 MTKEEYLASLR 153

[Close]

BLAST of CsGy6G020520 vs. ExPASy TrEMBL
Match: A0A6J1G4W8 (ethylene-responsive transcription factor WRI1-like OS=Cucurbita moschata OX=3662 GN=LOC111450835 PE=4 SV=1)

HSP 1 Score: 201 bits (510), Expect = 6.15e-61
Identity = 104/134 (77.61%), Postives = 109/134 (81.34%), Query Frame = 0


Query: 3   AVKGVKRRRRNASSSSPTVVGGGGDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEAH 62
           AVK ++RRRR+   S           QP K   +QST TKRSS+FRGVSRHRWTGRFEAH
Sbjct: 19  AVKCIRRRRRSCKGSR----------QPPKSAADQSTTTKRSSRFRGVSRHRWTGRFEAH 78

Query: 63  LWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKI 122
           LWDKGSWNPTQRKKGKQ   GAYDEEESAARAYDLAALKYWGTSTFTNFS SDYENEIKI
Sbjct: 79  LWDKGSWNPTQRKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFSASDYENEIKI 138

Query: 123 MKTVTKEEYLASLR 133
           MK VTKEEYLASLR
Sbjct: 139 MKNVTKEEYLASLR 142

[Close]

BLAST of CsGy6G020520 vs. TAIR 10
Match: AT2G41710.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-33
Identity = 66/102 (64.71%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 39  TATKRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLA 98
           TA KRSS +RGV+RHRWTGR+EAHLWDK +WN  Q KKGKQ   GAYD+EE+AARAYDLA
Sbjct: 63  TAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLA 122

Query: 99  ALKYWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLRSFMF 138
           ALKYWG  T  NF ++DY  +++ M+ +++EEYLASLR + F
Sbjct: 123 ALKYWGPGTLINFPVTDYTRDLEEMQNLSREEYLASLRRYPF 164

[Close]

BLAST of CsGy6G020520 vs. TAIR 10
Match: AT2G41710.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 138.7 bits (348), Expect = 4.4e-33
Identity = 65/98 (66.33%), Postives = 80/98 (81.63%), Query Frame = 0


Query: 39  TATKRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLA 98
           TA KRSS +RGV+RHRWTGR+EAHLWDK +WN  Q KKGKQ   GAYD+EE+AARAYDLA
Sbjct: 63  TAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLA 122

Query: 99  ALKYWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLR 134
           ALKYWG  T  NF ++DY  +++ M+ +++EEYLASLR
Sbjct: 123 ALKYWGPGTLINFPVTDYTRDLEEMQNLSREEYLASLR 160

[Close]

BLAST of CsGy6G020520 vs. TAIR 10
Match: AT3G54320.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 137.9 bits (346), Expect = 7.5e-33
Identity = 75/128 (58.59%), Postives = 87/128 (67.97%), Query Frame = 0


Query: 9   RRRRNASSSSPTVVGGGGDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEAHLWDKGS 68
           +R + A  SSP+     GD + H   P    +T+RSS +RGV+RHRWTGRFEAHLWDK S
Sbjct: 36  KRAKRAKKSSPS-----GD-KSHN--PTSPASTRRSSIYRGVTRHRWTGRFEAHLWDKSS 95

Query: 69  WNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKIMKTVTK 128
           WN  Q KKGKQ   GAYD EE+AA  YDLAALKYWG  T  NF    Y  E++ M+ VTK
Sbjct: 96  WNSIQNKKGKQVYLGAYDSEEAAAHTYDLAALKYWGPDTILNFPAETYTKELEEMQRVTK 155

Query: 129 EEYLASLR 134
           EEYLASLR
Sbjct: 156 EEYLASLR 155

[Close]

BLAST of CsGy6G020520 vs. TAIR 10
Match: AT3G54320.3 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 137.9 bits (346), Expect = 7.5e-33
Identity = 75/128 (58.59%), Postives = 87/128 (67.97%), Query Frame = 0


Query: 9   RRRRNASSSSPTVVGGGGDGQPHKLMPNQSTATKRSSKFRGVSRHRWTGRFEAHLWDKGS 68
           +R + A  SSP+     GD + H   P    +T+RSS +RGV+RHRWTGRFEAHLWDK S
Sbjct: 36  KRAKRAKKSSPS-----GD-KSHN--PTSPASTRRSSIYRGVTRHRWTGRFEAHLWDKSS 95

Query: 69  WNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSISDYENEIKIMKTVTK 128
           WN  Q KKGKQ   GAYD EE+AA  YDLAALKYWG  T  NF    Y  E++ M+ VTK
Sbjct: 96  WNSIQNKKGKQVYLGAYDSEEAAAHTYDLAALKYWGPDTILNFPAETYTKELEEMQRVTK 155

Query: 129 EEYLASLR 134
           EEYLASLR
Sbjct: 156 EEYLASLR 155

[Close]

BLAST of CsGy6G020520 vs. TAIR 10
Match: AT1G79700.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 2.8e-32
Identity = 64/102 (62.75%), Postives = 79/102 (77.45%), Query Frame = 0


Query: 35  PNQSTATKRSSKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARA 94
           P ++   +RSS +RGV+RHRWTGR+EAHLWDK SWN TQ KKG+Q   GAYDEEE+AARA
Sbjct: 41  PPRNAPLQRSSPYRGVTRHRWTGRYEAHLWDKNSWNDTQTKKGRQVYLGAYDEEEAAARA 100

Query: 95  YDLAALKYWGTSTFTNFSISDYENEIKIMKTVTKEEYLASLR 134
           YDLAALKYWG  T  NF +  Y+ ++K M+  +KEEY+ SLR
Sbjct: 101 YDLAALKYWGRDTLLNFPLPSYDEDVKEMEGQSKEEYIGSLR 142

The following BLAST results are available for this feature:

BLAST of CsGy6G020520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWK2	1.6e-32	64.71	AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thali...	[more]
Q6X5Y6	1.1e-31	58.59	Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
A0JPZ8	4.0e-31	62.75	AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thali...	[more]
X5HYT8	4.0e-31	65.98	AP2-like ethylene-responsive transcription factor SMOS1 OS=Oryza sativa subsp. j...	[more]
Q94AN4	1.5e-30	67.37	AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thali...	[more]

BLAST of CsGy6G020520 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647297.1	2.44e-112	98.79	hypothetical protein Csa_004348 [Cucumis sativus]	[more]
KAA0036452.1	1.35e-83	95.49	AP2-like ethylene-responsive transcription factor [Cucumis melo var. makuwa] >TY...	[more]
XP_031742891.1	4.40e-83	97.06	AP2-like ethylene-responsive transcription factor At1g79700 [Cucumis sativus]	[more]
XP_008456799.1	2.41e-78	93.38	PREDICTED: AP2-like ethylene-responsive transcription factor At1g79700 [Cucumis ...	[more]
XP_038885870.1	2.01e-70	85.07	AP2-like ethylene-responsive transcription factor At1g16060 [Benincasa hispida]	[more]

BLAST of CsGy6G020520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJ57	1.48e-85	99.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G404260 PE=4 SV=1	[more]
A0A5A7SYZ9	6.54e-84	95.49	AP2-like ethylene-responsive transcription factor OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3C431	1.16e-78	93.38	AP2-like ethylene-responsive transcription factor At1g79700 OS=Cucumis melo OX=3...	[more]
A0A6J1DD61	1.78e-61	77.10	ethylene-responsive transcription factor WRI1-like OS=Momordica charantia OX=367...	[more]
A0A6J1G4W8	6.15e-61	77.61	ethylene-responsive transcription factor WRI1-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of CsGy6G020520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41710.2	1.2e-33	64.71	Integrase-type DNA-binding superfamily protein	[more]
AT2G41710.1	4.4e-33	66.33	Integrase-type DNA-binding superfamily protein	[more]
AT3G54320.1	7.5e-33	58.59	Integrase-type DNA-binding superfamily protein	[more]
AT3G54320.3	7.5e-33	58.59	Integrase-type DNA-binding superfamily protein	[more]
AT1G79700.1	2.8e-32	62.75	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 46..115 e-value: 6.0E-17 score: 72.3
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 45..101 e-value: 4.0E-10 score: 39.8
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 46..109 score: 17.595871
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 45..111 e-value: 5.41936E-17 score: 68.8375
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 45..111 e-value: 4.0E-22 score: 80.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	PANTHER	PTHR32467:SF116	BINDING PROTEIN, PUTATIVE-RELATED	coord: 4..133
None	No IPR available	PANTHER	PTHR32467	AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR	coord: 4..133
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 45..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G020520.2	CsGy6G020520.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity