CsGy6G020345 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G020345
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	centromere protein V-like
Location	Gy14Chr6: 21108344 .. 21115865 (-)
RNA-Seq Expression	CsGy6G020345
Synteny	CsGy6G020345

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTATTTTTCTCAAGTTTCCTTGAAAGCCCTTCATCGGTCGGCGCCGGTTCCCTGATTCACGGTTGCCAACGCCCGTCGGCCACTGAGGTTGAGGTTCGTTTGCTCTTCTTTCCTTCATCTTCGACTTTTTCTCAATCCAAAATTTGTTTCTGCAGTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTCCCATCTCATTTTTCGTTTTGTTCTCTATTTCTCATGGATCCAAACACCCCTTGGATTTCTAGTAATTTGATTACATTCCAGCTTGAGATATTCTCTTTTTCAAAATCTTTGATATATTGATATGTGATTCAGTTTATATTTGTTAAATTCTGTTTAAGCTGGCTTTTGAATTACAACTTGTTGTTTTAAGCTCCATCCAAGTTGATTTAAACCAATTGTATACCTATTACCTAGGTACTCATCAAACTTGTGTAACTTCTATTTCATCGAAACTTCTTTCTTGCTATGAAGTTAGACTATATTTCTAACTTTTACTTTGAAGAAACCGTTATGAGGAAGTGATGATGGAATGTTCTTCCCCATTCACCCACTATAACTTTTAGAATCTCCCTACCTTGTTTTGTAAACTTCATACATCAATAAAGTTTGTTTCTTATACAAGATAATACACACACACACCTTCTCAAGTTGTAGCCAAACCAAAAAACGGGAGGGTACCGCATTGGGCAGAAGACGATCCAAAAGTCAAAGGCTCACACTTATCATTAATATTCACTCTAAAAGAAGGAAGGATCTTTGGCATAAAGTACCTTCTTATTAGAGAAAGGGCAACTTAATAATAAGAAAAGAGGGGGTGAGGTAGGCGACAGGTAGCTTGCTTCCAAGCTGGCCCATTTGGATTCTATTAGTATGAAGAGCCGAAAACATTACCACCATCAACGGTTGATGATATTAAAACCCAGACCTGTTACTAATGTACTGACCCCCCAACACCAGCCAACTATAAGAGCAGATTGGCGAACTGGGTGATCTTTTGCCTAAACCTCATAGGAAGAAAACAGCATTGTAGGACTCAGTCCGTTGTTCTAGTGATAGGGACTGTCTTAAGTTGGTTTGGGTTAAAAGCTTGTTAGAATACTGATTTCAATACATTCCTTCCTTCTATTTTCACTGATTTCCAGTGAAGGTTCCTTTTTTCATTATCTTCTTGGTTACTAAACTTACTAGCATTTTCCCTCCCTTTTTCTTTAAGTCATTTATATGTGAGGTTCTACAACATGTTAATAATTGTACTGGGTTAATCTTACAGACCCTAAGCTAAGTTCACAAAACTTCTACTTCAAGGCTTAGTTCAAAAGAGATCTTGAAACTCCAGTTGAGGTATTCCTATCAAGGTCATGGGACTAAAATTTGAGATGTGAAAGAAAGTTACTTATATTGTTGGAGTAGCAATGAGGAGGTTACTTGTAGAAATCGAAGGTTACCTTGAGAAAAGATCATGAGGAGCATATCATTCAATTGACGTTCTTTCCTTTTCTCATACGATATTGTAGTAACATGATTGCCACAACCCACTTTAAATTTGTTTTGAGTCTTTCTTTTACGAATACCAGTTAAGGTGGTTTGTAGGTCTCTGAAGAAGAGTTTTTAATAGAGAAATATAAGAGTGTGGATCTACTTTTTCTAAGTTCAATCTCTAGTTAATTTTGGCCTCGATGAAGATAGATTAATAGAACTGTTTGTTGTCAATTGGTTCCTTTGAAACTCAATTCTAATCATTTCAAACTTGCATTCTACTTTTGCCAAGCTATTTTAGGGCAGTAAGTGCTCTTAAATGGTCAAGTTTCTGTTATGATCCATAGCCTACACGAAGTTATACTCAATTTTGATCTAGATTTTTTATTATGTGGAAAGGATGTGTAAAATATGAATCTTCTATTCTTTTAATTTAATTTTGCCACTAATTTTTGGATTTTCAATCGTGATCTCCGTTTTCAAAGACATGGAAAACTGGCTTCTAATAGTGCTTTTGATCTCCACTCAAAAGTTAGATTTTGATGAAAAGGGTGATACGAGGATCTTTCTTTCATCTCTATGATTAGAAAGAAACAATAGGATCTTCAATAATAGTGCTTTTGATCTCCACTCAAAAGTTAGATTTTGATGAAAAGGGTGATACTAGGATCTTTCTTTCATCTCTATGATTAGAAAGAAACAATAGGATCTTCAATCATGTCTGAACTGTTGGCTAATTGCACATCTATTGACCTCAAATTAGAATGTCATCCAAACGGATTTCTGTAATTATGACAGATTTTCTATTTACTCAGACTAGAAGCGTTCTAATTTCCCTTTTAAATGATAAGGTCCCTTCCCTTTGATGTTTTGGCTGTATTCTCAATTGTTATCTCTTGTCAAAAAGTAAATAATTGAAAAATAGAAAGATAATATGATATGATTCATAATTGGATCAATCTGAAACATGGACCAACTTTCTTTTCTGTTTTAGTTTACGAGGTCTATACCTTTTACTCAGGAAAACGAATAATCATTCACTAAAAAGATTGGAAGGTTTGATTCCTTTTCAATGGCTTCTGAGTTGGTTGTACATCATGGTGGATGTCACTGCAAGAAAGTAAGATGGCGAGTTGAAGCACCTGCCAGTGTTGTTGCTTGGGATTGCAACTGTTCCAACTGCTTCATGAGGGCCAATACACATTTTATTGTACCTTTGGAACGGTTCAAGCTTTTAGGAGATTCTAGCAACTTTGTTTCTACCTACACATTTGGTTCTCACACTGCAAAACATACCTTCTGCAAAAACTGCGGCATTACCTCATTTTACCATCCACGCTCAAATCCAGATGGAGTTGCTATTACTTTCAAATGTGTTGATCCTGGAACTTTGACCCATGTTGAGGTTAGGCAGTTTGATGGGAGCAACTGGGAGGCCTCTTATGATCAAACAGGCATTGCTTCATTGTCAAAGTTGAACATAAGTTAGTATGCATTTTGACAACTGCTGTAAACTAAATTTATGACCGTTGATGATTGATACAAACTTTTTTTATATGGCTTCCATCAACGATTGATATGGCTGCTTGAAAAGGTTTGTTGCTCGGACAACCCCTTCACGTGCAAACTTCCCCTTGCCGCTCGCTCTTTCCATTGTCGATCAGGATTTCCCATTACTGATAAAAATAGGTGCTACGTCTGGTCGGTAGTGTTTGGGTCGAGCAAGGTAGGAAAGGAGGTGATGTTTTCTCTATTGGTTTCCAATGCCGATGATGAGATCTCCATTTTCATAGTTTTTCTTATTCATGATCATACTTTATTCTACCAAATATGTTTTTTTAATTAGTTGTGAATCTGTATTTTGCTATTTATGTTCATGTTTGATGCTGCTGTCTATATCCAATTTGCCTACCCATAGCTTATGCCATTACTCCTACTGTGTGTATATCGTGAATACTTATGTACTTTCCATTGCAATATGCTTCTGTATATCTTTTTTACCTAAGCTTCTGATGCTTCTGTCCCCTTTTTTTTTTTTTGTAAGTCCACATCATGTGCATTATGTGGTAGGCATGTTGCATTTGAACTTTGACCCACTTTTCTGATTAACTGACTTTTCTTTACCCATTTGTTGTATGTCGTCTTTCCCGTTGTCATCAGTCCATGCTCAGGTTTGCTTGTTGAAGGGTCTTCAATGTCATTACTTCTTCCATTTCCCATCTATATATACTTGCTATGCCATTGCATAGTAACTCTTGGTTCCCCCTTTGTTTGGTAATGTATATGCATCCATCTGTTTGTGTTCCATTGTGTGTTTGGTCTTCACAGTCTACCTATGCACTTGTCATTGATTGATGTTGCGATCCATGCTATGCCACTTGTTGTTTATTTCCATGCCTTTCATGTCACCACTTGCATACTACGACCCGGTTCCATTTTTGTTGTCCATTCACATGTCTTTCATATCTCCACATTTGAGGTTTGTGTTCCATTGTTGTTGTTCATTTCCATGATTTTCATATCACCACATATTGAGGCTCGTGTTCCATTGTTGTTGTTCATTTTCCATGCCTTTCATATCACCACATTTGATACTGTTACATTTTTGTAGTTTTTTTTCCATTTTCTTTGTTCATGTGCATGCCTTTCATATCTTCACATTTCCTAGCATTGCGTATGTGAAGACATTTGTTTCACTCCATGAAGTTCAATTTCAAATTATTGAACAAATTTCCTTCCTCTAAGACACTCAAAATTTTCACATTGTTCACGTTTTTTTTTTTTTTTGACGTAATTGTTGATCCTTTGTTCATTTGTCCTTCGTATGTCTTTGGGAAAGATCGCGCAACGGGCGCACGTGCAGAGACATTTGATGTAGAACATCCTCTTTTCTTGATGTTTCTCTAAGTTCTTTAGTATTTCTTTAGCTAATTCTTGAGTATCTTGAATTGTCATTCTTGTATTTTAGGATTAGTCATCTTTAGTTAAGGCTTGTGTATCTTGAGTTACTAATCGGCTTGTGTATCTTGAGTTACTAATCTTGTATCTTGAGTTAGTTATAAATAAGCTAACTCAACTCCAAGTTAGTTCTAAAATAATTAACTTCTAACAACTCTTGTAAACTTCCTGCCTATAAAAAGGCTTTTCCTCTCATTAATAAATCAATCATCTGAAGTATATGGAAACAACTTACCTGGACATTAATAGACGATTCTGACTCTTCCGATGAAGACAACTTGTTGAACATTCATCAAGAACCACAACAAAGGTTCCCTATCCCTCGTTTATTCGACCTACTTGACCAACTAGGTAAGGCTTCCATCTTTTCCAAAGTAGATCTTAAGAGTGGCTACCAATAAATTAGAATTAAACCAGGGGATGAGTGGAAAACAACCTTCAAAACTAATGAAGGATTGTTTGAATAGTTAGTTATGCCTTTTGGTCTCTCAAATGCCCTTAGCATCTTTGTGAGATTAATGAATCAAATCCTACGAACTTTTTTGAATCAATCATTGTGGTATACTTTGATGATATATTCATCTATAGCTCCTCTAAGGAAGATCACCTAAAACACATTCAGTTACTTTTTACAACCTTACAAGAAAATGAATTACAAATTAACTTAAAAAAATGTGAATTTTTGTGCTATAGCATTCATTTTCTTGGATTTATCATAAGTTTTAATGACATTTTTGTTGATCCTAAAAAGATTCACTCTATTAGTTATTTGCCACAACCAAAGACTCCAAAAGATATTCAATGTTTTTTTAGGTTTAGCCACTTTTTATAGAAGGTTCATAAAGAACTTTAGCACTATTGTAGCACCTTTAACAAACTGTTTAAAGAAAGGTAATTTTCAATGAGGACAAATTGAAGAAGACAACTTCTATAAATTGAAATTAGCTTTAACTAGCCCCTTGTTTTAAAACTATCGAACTTTGGTAAACCATTCACAGTAGATGCTTCAAGTCTAGGAATAGGAGTTGTCCTTAGTCAAGAAGGTGCTTTAGAGTATTTTAGTGAAAAATTAAGTACTTTTAGACAATTTGAGTACCTATGAACATGAACTATATGTCTTTGTGAGTGCTTTAAAACAATGGGAATATTATCTACTTGCTAATAATTTTATCTTGCTTCCTGACCAATTTTCTCTTAAATTTCTGAATTCCCAAAAAATAATTAGTAGAATGTATGCTCGATGACTGCAATTCTTGCAAAGATTTGATTTTGTGATCAAAATACTTCGGGTAAGATTAATAAGGCTACTAATGGCCTCAGTCGAAAAGGTATACTTCTCACCACCCTTCAATCTCAAATCATTGCCTTTGATCACATACCTACATTGTACCCTTCGGACACTAATTTTAAAAGTATTTGGAAAGCTTGCTCTAGCCATAAACCTTGCAAGACTACCTGCATGTCATCATTCCAAAATGACCAACAAGAGAATGAGTCAATTTCAAACATTAGAAAGACTCGGCTCCAACGCTTACTGAGTAGATCTTCCAGCAAACATGAGAATTAACCCATCTTTAAATATTGTTTACTTGTCACCTTACTATGCACTAGATTCCTTCTCTTTAGCTCCCTATCACTAGAAGAAAACAACCCTACAATGACAGTTATATATCTCAAAATATGAATGGAAGAAAAAAAACTGTCACGAAATATAAAATTTCGCGTTTTTGGCGGGAAAAGACGGAATTTTTCGGAAAACACTTTTCGCGACAGTTATTAAATGTCATAGAATGTTAGGGTTAAAAATTTTATTATTTTATATTTAAAAAATTAAAATTACATATTTATATTTTTAAAAAAACCCAAATTCTCCAAATTTTTCCCCAAATTCTTTCTCCCAAAATTTTATTATTTTTCTTTTTTTTTTCTTCTTTTTCTTTTTCTTTTCTTTTCTCCCTTCTTCTTCCTCCCGAGCGCCGCGACCATCTCCATCTTCTCTTCTCCTTTCCGTTCGCAGCAAGCAGTCGCCGCGTGACCTCCCGCCCAGTGCCATGTAACCCTCTGTCCAGGTCTGCGTCGCCGTGCCCAGTCCTAACCGCCGCTGCCACCGTCTCCGTGCCATTGCACTGTCTCCGTCGAAGCCAAAACCGCCACGCCCTCCGCTCACAACCGTCGTCCAGATCTGCATCGCCGGCTGTCTCCCTCGAGGTCGAGTTTTATCCTAGGGGAGGGGTTTGATGTTGAACATCCTCATTTCTTGATGTTTCTTTGAGTTCTTTAGTATTTCTTTAGCTAATTCTTGAGATTAGTTATCTTTAGTAAGGCGTGTATCTTGAGTTACTAATCTTGTATCTTGAGTTAGTTTAACTAACTCAACCCCAAGTTAGTTCTAAAATAACTAACTTCTAACAATTCTTGTAAACTTTCAGCCTATAAAAGGGCTTCTCTTCTCATTAATAAATCACTAATAAATCATCATCTGAAGTATTATTCATGATATTTGCTAAACTTTGCATTACTACATCACATTAGCTGATGTCGGGTCCAATGTGTCAGTTGAAAACGAGGGATTTCATCCGAAAGATGGGATCGCTAAGGAGTTCCTTACTATGTATAGTAAGAGAATGAACATGTCGCCCGAAGACATGATGGACGCATGACCTGGTAGGTCCAGCGACTGTAGGTCGGGTTTCAATGGATTGGAGAGGAAGCGCAGAGGGTAGACTGTCGAGACTGTGGAGGTGGATTGTGCGAATGAACAGCTGAGGGCCATTGTGGACTGGTTGAAGATAACTAGCCAGGAGGAAGACGTTGTGCGGCGGGAAGTCATTGGACAGTTGCAGATTATCCCTCAGCTCAGTGTATCAGACAGTGCGTAATGTGTGATGGTAATGACACAGAAGTTGGCTGTCATGAAAGCCTTCTTGGATCTACCCGATGATATGAAGCTCGCATACTGCAACGTCATTTTGCATGACAACCCATGATTGGTCGTCCACTTCAACCGCTTGACCCTTTTTTTTTTGCTTTTGCATACTGTCTGATGTAATTGACTTCACTTTATAACGCCCTTCCTAC

mRNA sequence

ACTATTTTTCTCAAGTTTCCTTGAAAGCCCTTCATCGGTCGGCGCCGGTTCCCTGATTCACGGTTGCCAACGCCCGTCGGCCACTGAGGTTGAGTTTACGAGGTCTATACCTTTTACTCAGGAAAACGAATAATCATTCACTAAAAAGATTGGAAGGTTTGATTCCTTTTCAATGGCTTCTGAGTTGGTTGTACATCATGGTGGATGTCACTGCAAGAAAGTAAGATGGCGAGTTGAAGCACCTGCCAGTGTTGTTGCTTGGGATTGCAACTGTTCCAACTGCTTCATGAGGGCCAATACACATTTTATTGTACCTTTGGAACGGTTCAAGCTTTTAGGAGATTCTAGCAACTTTGTTTCTACCTACACATTTGGTTCTCACACTGCAAAACATACCTTCTGCAAAAACTGCGGCATTACCTCATTTTACCATCCACGCTCAAATCCAGATGGAGTTGCTATTACTTTCAAATGTGTTGATCCTGGAACTTTGACCCATGTTGAGGTTAGGCAGTTTGATGGGAGCAACTGGGAGGCCTCTTATGATCAAACAGGCATTGCTTCATTGTCAAAGTTGAACATAAGTTAGTATGCATTTTGACAACTGCTGTAAACTAAATTTATGACCGTTGATGATTGATACAAACTTTTTTTATATGGCTTCCATCAACGATTGATATGGCTGCTTGAAAAGGTTTGTTGCTCGGACAACCCCTTCACGTGCAAACTTCCCCTTGCCGCTCGCTCTTTCCATTGTCGATCAGGATTTCCCATTACTGATAAAAATAGGTGCTACGTCTGGTCGGTAGTGTTTGGGTCGAGCAAGCTGATGTCGGGTCCAATGTGTCAGTTGAAAACGAGGGATTTCATCCGAAAGATGGGATCGCTAAGGAGTTCCTTACTATGTATAGTAAGAGAATGAACATGTCGCCCGAAGACATGATGGACGCATGACCTGGTAGGTCCAGCGACTGTAGGTCGGGTTTCAATGGATTGGAGAGGAAGCGCAGAGGGTAGACTGTCGAGACTGTGGAGGTGGATTGTGCGAATGAACAGCTGAGGGCCATTGTGGACTGGTTGAAGATAACTAGCCAGGAGGAAGACGTTGTGCGGCGGGAAGTCATTGGACAGTTGCAGATTATCCCTCAGCTCAGTGTATCAGACAGTGCGTAATGTGTGATGGTAATGACACAGAAGTTGGCTGTCATGAAAGCCTTCTTGGATCTACCCGATGATATGAAGCTCGCATACTGCAACGTCATTTTGCATGACAACCCATGATTGGTCGTCCACTTCAACCGCTTGACCCTTTTTTTTTTGCTTTTGCATACTGTCTGATGTAATTGACTTCACTTTATAACGCCCTTCCTAC

Coding sequence (CDS)

ATGGCTTCTGAGTTGGTTGTACATCATGGTGGATGTCACTGCAAGAAAGTAAGATGGCGAGTTGAAGCACCTGCCAGTGTTGTTGCTTGGGATTGCAACTGTTCCAACTGCTTCATGAGGGCCAATACACATTTTATTGTACCTTTGGAACGGTTCAAGCTTTTAGGAGATTCTAGCAACTTTGTTTCTACCTACACATTTGGTTCTCACACTGCAAAACATACCTTCTGCAAAAACTGCGGCATTACCTCATTTTACCATCCACGCTCAAATCCAGATGGAGTTGCTATTACTTTCAAATGTGTTGATCCTGGAACTTTGACCCATGTTGAGGTTAGGCAGTTTGATGGGAGCAACTGGGAGGCCTCTTATGATCAAACAGGCATTGCTTCATTGTCAAAGTTGAACATAAGTTAG

Protein sequence

MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLNIS*

Homology

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BLAST of CsGy6G020345 vs. ExPASy Swiss-Prot
Match: Q9CXS4 (Centromere protein V OS=Mus musculus OX=10090 GN=Cenpv PE=1 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 2.7e-33
Identity = 67/131 (51.15%), Postives = 86/131 (65.65%), Query Frame = 0


Query: 5   LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVST 64
           LV H GGCHC  VR+ V A A +  +DCNCS C  + N HFIVP  RFKLL  + + ++T
Sbjct: 122 LVKHTGGCHCGAVRFEVWASADLHIFDCNCSICKKKQNRHFIVPASRFKLLKGAES-ITT 181

Query: 65  YTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNWE-AS 124
           YTF +H A+HTFCK CG+ SFY PRSNP G  I   C+D GT+  V   +F+GS+WE A 
Sbjct: 182 YTFNTHKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDEGTVRSVVTEEFNGSDWERAM 241

Query: 125 YDQTGIASLSK 135
            +   I ++SK
Sbjct: 242 KEHKTIKNMSK 251

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BLAST of CsGy6G020345 vs. ExPASy Swiss-Prot
Match: Q7Z7K6 (Centromere protein V OS=Homo sapiens OX=9606 GN=CENPV PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.0e-33
Identity = 66/131 (50.38%), Postives = 85/131 (64.89%), Query Frame = 0


Query: 5   LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVST 64
           LV H GGCHC  VR+ V A A +  +DCNCS C  + N HFIVP  RFKLL   +  ++T
Sbjct: 145 LVKHTGGCHCGAVRFEVWASADLHIFDCNCSICKKKQNRHFIVPASRFKLL-KGAEHITT 204

Query: 65  YTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNWE-AS 124
           YTF +H A+HTFCK CG+ SFY PRSNP G  I   C+D GT+  +   +F+GS+WE A 
Sbjct: 205 YTFNTHKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDEGTVRSMVTEEFNGSDWEKAM 264

Query: 125 YDQTGIASLSK 135
            +   I ++SK
Sbjct: 265 KEHKTIKNMSK 274

[Close]

BLAST of CsGy6G020345 vs. ExPASy Swiss-Prot
Match: A0A0U1RR11 (Centromere protein V-like protein 1 OS=Homo sapiens OX=9606 GN=CENPVL1 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.9e-20
Identity = 46/115 (40.00%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 5   LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVST 64
           LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP  RF LL  + + V T
Sbjct: 130 LVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLLQGAESIV-T 189

Query: 65  YTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSN 120
           Y   +H A H+FC  CG+ SF+   S+P    +   C+D GT+  V + +  G +
Sbjct: 190 YRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVGGGD 243

[Close]

BLAST of CsGy6G020345 vs. ExPASy Swiss-Prot
Match: P0DPI3 (Centromere protein V-like protein 2 OS=Homo sapiens OX=9606 GN=CENPVL2 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.9e-20
Identity = 46/115 (40.00%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 5   LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVST 64
           LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP  RF LL  + + V T
Sbjct: 130 LVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLLQGAESIV-T 189

Query: 65  YTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSN 120
           Y   +H A H+FC  CG+ SF+   S+P    +   C+D GT+  V + +  G +
Sbjct: 190 YRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVGGGD 243

[Close]

BLAST of CsGy6G020345 vs. ExPASy Swiss-Prot
Match: A0A0U1RRI6 (Centromere protein V-like protein 3 OS=Homo sapiens OX=9606 GN=CENPVL3 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.9e-20
Identity = 46/115 (40.00%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 5   LVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSNFVST 64
           LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP  RF LL  + + V T
Sbjct: 145 LVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLLQGAESIV-T 204

Query: 65  YTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSN 120
           Y   +H A H+FC  CG+ SF+   S+P    +   C+D GT+  V + +  G +
Sbjct: 205 YRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVGGGD 258

[Close]

BLAST of CsGy6G020345 vs. NCBI nr
Match: XP_004146757.2 (centromere protein V [Cucumis sativus] >XP_004146758.2 centromere protein V [Cucumis sativus] >XP_031743695.1 centromere protein V [Cucumis sativus] >KAE8647287.1 hypothetical protein Csa_003537 [Cucumis sativus])

HSP 1 Score: 298 bits (763), Expect = 7.96e-102
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTH+EVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120

Query: 121 EASYDQTGIASLSKLNIS 138
           EAS DQTGIASLSKLNIS
Sbjct: 121 EASCDQTGIASLSKLNIS 138

[Close]

BLAST of CsGy6G020345 vs. NCBI nr
Match: XP_016903271.1 (PREDICTED: centromere protein V isoform X6 [Cucumis melo])

HSP 1 Score: 291 bits (744), Expect = 2.49e-99
Identity = 133/138 (96.38%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASYDQTGIASLSKLNIS 138
           EASYD TGIAS SKLN S
Sbjct: 121 EASYDHTGIASFSKLNTS 138

[Close]

BLAST of CsGy6G020345 vs. NCBI nr
Match: XP_008464792.1 (PREDICTED: centromere protein V isoform X4 [Cucumis melo])

HSP 1 Score: 290 bits (741), Expect = 7.92e-99
Identity = 132/138 (95.65%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASYDQTGIASLSKLNIS 138
           EASYD TGIAS SKLN +
Sbjct: 121 EASYDHTGIASFSKLNTN 138

[Close]

BLAST of CsGy6G020345 vs. NCBI nr
Match: XP_008464793.1 (PREDICTED: centromere protein V isoform X5 [Cucumis melo])

HSP 1 Score: 289 bits (740), Expect = 1.05e-98
Identity = 132/136 (97.06%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASYDQTGIASLSKLN 136
           EASYD TGIAS SKLN
Sbjct: 121 EASYDHTGIASFSKLN 136

[Close]

BLAST of CsGy6G020345 vs. NCBI nr
Match: XP_016903270.1 (PREDICTED: centromere protein V isoform X1 [Cucumis melo] >KAA0045397.1 centromere protein V isoform X1 [Cucumis melo var. makuwa] >TYK11344.1 centromere protein V isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 291 bits (744), Expect = 1.54e-98
Identity = 133/138 (96.38%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASYDQTGIASLSKLNIS 138
           EASYD TGIAS SKLN S
Sbjct: 121 EASYDHTGIASFSKLNTS 138

[Close]

BLAST of CsGy6G020345 vs. ExPASy TrEMBL
Match: A0A0A0KE05 (CENP-V/GFA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G403060 PE=3 SV=1)

HSP 1 Score: 298 bits (763), Expect = 1.52e-102
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTH+EVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHIEVRQFDGSNW 120

Query: 121 EASYDQTGIASLSKLNIS 138
           EAS DQTGIASLSKLNIS
Sbjct: 121 EASCDQTGIASLSKLNIS 138

[Close]

BLAST of CsGy6G020345 vs. ExPASy TrEMBL
Match: A0A1S4E4W3 (centromere protein V isoform X6 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=1)

HSP 1 Score: 291 bits (744), Expect = 1.21e-99
Identity = 133/138 (96.38%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASYDQTGIASLSKLNIS 138
           EASYD TGIAS SKLN S
Sbjct: 121 EASYDHTGIASFSKLNTS 138

[Close]

BLAST of CsGy6G020345 vs. ExPASy TrEMBL
Match: A0A1S3CNW6 (centromere protein V isoform X4 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=1)

HSP 1 Score: 290 bits (741), Expect = 3.83e-99
Identity = 132/138 (95.65%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASYDQTGIASLSKLNIS 138
           EASYD TGIAS SKLN +
Sbjct: 121 EASYDHTGIASFSKLNTN 138

[Close]

BLAST of CsGy6G020345 vs. ExPASy TrEMBL
Match: A0A1S3CMF5 (centromere protein V isoform X5 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=1)

HSP 1 Score: 289 bits (740), Expect = 5.09e-99
Identity = 132/136 (97.06%), Postives = 133/136 (97.79%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASYDQTGIASLSKLN 136
           EASYD TGIAS SKLN
Sbjct: 121 EASYDHTGIASFSKLN 136

[Close]

BLAST of CsGy6G020345 vs. ExPASy TrEMBL
Match: A0A5D3CJK9 (Centromere protein V isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold807G00190 PE=3 SV=1)

HSP 1 Score: 291 bits (744), Expect = 7.46e-99
Identity = 133/138 (96.38%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN
Sbjct: 1   MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120
           FVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW
Sbjct: 61  FVSTYTFGSHTAKHTFCKNCGITSFYRPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120

Query: 121 EASYDQTGIASLSKLNIS 138
           EASYD TGIAS SKLN S
Sbjct: 121 EASYDHTGIASFSKLNTS 138

[Close]

BLAST of CsGy6G020345 vs. TAIR 10
Match: AT5G16940.1 (carbon-sulfur lyases )

HSP 1 Score: 217.2 bits (552), Expect = 8.1e-57
Identity = 91/134 (67.91%), Postives = 108/134 (80.60%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           M SEL+ H GGCHC K++WRV+A  SV+AW CNCS+C MR N HFIVP   F+LL DS +
Sbjct: 1   MESELIFHEGGCHCGKIKWRVKAARSVIAWSCNCSDCSMRGNVHFIVPSSNFELLDDSKD 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120
           F++TYTFG+HTAKHTFCK CGITSFY PRSNPDGVA+T KCV  GTL H+EV+ +DG NW
Sbjct: 61  FITTYTFGTHTAKHTFCKVCGITSFYIPRSNPDGVAVTVKCVKSGTLAHIEVKSYDGQNW 120

Query: 121 EASYDQTGIASLSK 135
           E S+ +TGIAS SK
Sbjct: 121 EMSHKKTGIASFSK 134

[Close]

BLAST of CsGy6G020345 vs. TAIR 10
Match: AT5G16940.2 (carbon-sulfur lyases )

HSP 1 Score: 217.2 bits (552), Expect = 8.1e-57
Identity = 91/134 (67.91%), Postives = 108/134 (80.60%), Query Frame = 0


Query: 1   MASELVVHHGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLERFKLLGDSSN 60
           M SEL+ H GGCHC K++WRV+A  SV+AW CNCS+C MR N HFIVP   F+LL DS +
Sbjct: 1   MESELIFHEGGCHCGKIKWRVKAARSVIAWSCNCSDCSMRGNVHFIVPSSNFELLDDSKD 60

Query: 61  FVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHVEVRQFDGSNW 120
           F++TYTFG+HTAKHTFCK CGITSFY PRSNPDGVA+T KCV  GTL H+EV+ +DG NW
Sbjct: 61  FITTYTFGTHTAKHTFCKVCGITSFYIPRSNPDGVAVTVKCVKSGTLAHIEVKSYDGQNW 120

Query: 121 EASYDQTGIASLSK 135
           E S+ +TGIAS SK
Sbjct: 121 EMSHKKTGIASFSK 134

The following BLAST results are available for this feature:

BLAST of CsGy6G020345 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CXS4	2.7e-33	51.15	Centromere protein V OS=Mus musculus OX=10090 GN=Cenpv PE=1 SV=2	[more]
Q7Z7K6	8.0e-33	50.38	Centromere protein V OS=Homo sapiens OX=9606 GN=CENPV PE=1 SV=1	[more]
A0A0U1RR11	5.9e-20	40.00	Centromere protein V-like protein 1 OS=Homo sapiens OX=9606 GN=CENPVL1 PE=2 SV=1	[more]
P0DPI3	5.9e-20	40.00	Centromere protein V-like protein 2 OS=Homo sapiens OX=9606 GN=CENPVL2 PE=3 SV=1	[more]
A0A0U1RRI6	5.9e-20	40.00	Centromere protein V-like protein 3 OS=Homo sapiens OX=9606 GN=CENPVL3 PE=3 SV=1	[more]

BLAST of CsGy6G020345 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146757.2	7.96e-102	98.55	centromere protein V [Cucumis sativus] >XP_004146758.2 centromere protein V [Cuc...	[more]
XP_016903271.1	2.49e-99	96.38	PREDICTED: centromere protein V isoform X6 [Cucumis melo]	[more]
XP_008464792.1	7.92e-99	95.65	PREDICTED: centromere protein V isoform X4 [Cucumis melo]	[more]
XP_008464793.1	1.05e-98	97.06	PREDICTED: centromere protein V isoform X5 [Cucumis melo]	[more]
XP_016903270.1	1.54e-98	96.38	PREDICTED: centromere protein V isoform X1 [Cucumis melo] >KAA0045397.1 centrome...	[more]

BLAST of CsGy6G020345 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE05	1.52e-102	98.55	CENP-V/GFA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G403060 ...	[more]
A0A1S4E4W3	1.21e-99	96.38	centromere protein V isoform X6 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=...	[more]
A0A1S3CNW6	3.83e-99	95.65	centromere protein V isoform X4 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=...	[more]
A0A1S3CMF5	5.09e-99	97.06	centromere protein V isoform X5 OS=Cucumis melo OX=3656 GN=LOC103502595 PE=3 SV=...	[more]
A0A5D3CJK9	7.46e-99	96.38	Centromere protein V isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of CsGy6G020345 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16940.1	8.1e-57	67.91	carbon-sulfur lyases	[more]
AT5G16940.2	8.1e-57	67.91	carbon-sulfur lyases	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006913	CENP-V/GFA domain	PFAM	PF04828	GFA	coord: 31..106 e-value: 1.4E-7 score: 31.7
IPR006913	CENP-V/GFA domain	PROSITE	PS51891	CENP_V_GFA	coord: 8..121 score: 24.535385
None	No IPR available	GENE3D	2.170.150.70		coord: 8..124 e-value: 6.2E-25 score: 89.2
None	No IPR available	PANTHER	PTHR28620:SF9	CARBON-SULFUR LYASES	coord: 1..134
None	No IPR available	PANTHER	PTHR28620	CENTROMERE PROTEIN V	coord: 1..134
IPR011057	Mss4-like superfamily	SUPERFAMILY	51316	Mss4-like	coord: 6..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G020345.1	CsGy6G020345.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016846	carbon-sulfur lyase activity
molecular_function	GO:0046872	metal ion binding