CsGy6G020200 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G020200
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr6: 20943063 .. 20944326 (+)
RNA-Seq Expression	CsGy6G020200
Synteny	CsGy6G020200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TACAAAACCCTAATTAAAAACTCCTCTTCTGATTTCTTGCTCTCACCATTAGTTCTTTTTTCTTTACACAAACTCTTCTCGTTTCTTTTTCTTTTCGAAGATTCATCTCTTATGGCCTTTCTTAGGTTTGCTTGCTTTTTGTTGGTTGTTCTTCCTGTTACATCACTCTCCATCATCAAGTTTCATCAACAAGGTCTCTCTCTCTCTCTCTATTATTATTCATTCATCTCTCTCTTTTAATATATTTCTTTTCAACTATTTCTCAAATAGGGTGGGAATTAATGAACTCTCCCTAAATAAACTAAAATTTTGTTATATTTTTTAAATATGTTAAACAATTTTATCATTTAGAACAACTTCTCTTTCTATGTTTATGCAATATAATATTTATTGCATGCAATGATAGGCAAATTTTCAAGGGAATATTTGAGCTTTCGTTTACGCTATATATTCTAGTTGATAGGGGTGGTTTTTTTCGTATGTTATTGGTTCATTTACAGATTCATCAGATGGTATATTTTTGGAGAAAACAAAGTTAGAATTTAAGTCAAGTTAAATTTTAGTACTCACAGTTTCGAAAAACTATATAAATAATCTCTATAGCTAGTTAAAATTCTCGTATATTTAGTGTTTTTCTAAAAACTTTATCAAATCGTAAGAAGAAAATTTTAACTTTTTCCAAATGACAAGGACTAGATTTGCAACTTAACCTATGTGTTATAGTAAAAAATGTTGCATTTTATAATCCTTTAACGATTTTTGTACGTATAATTGATGTATTTTCTTGTAGTGTGAGTTTTTTTTTTTTTTTTTTTTTTTTTGTAGAAGACAAAGATGTAGCTGAAGATAGGGTTGGTTCACTCAAAATGGTAAGTAAACATAAACACCATACACACAAAATCTTCATCATACTAAACACATTATTAATCAATTTATATAATTCAGTAACAGTTTTTCTTTTTTCTTTTTAAACTCTGTTTAGGAACTTCTGAGGAACAATAACATTGGAGGAAGAAGATTAGGAGCAGCGAAAGAGTTCATGGAAATGGAGAATAGCAAAAGCTTTGGAAAGAATGGGTCTAAAGAGAAGATTTCAAATATGGTTTTTTCAAGTGCTTCCAATGAAGAAAATGGCAAAAAGAAGAATAAGAAGAAGGAGGTTTCAAGTTTAGAAACAAAGAAAATGGGAATTAGTGGGTCAACAGTTGTTTATAATAATGCTGATTATTTGACTTATATGCATCACCCACCAAAACATAATTGA

mRNA sequence

TACAAAACCCTAATTAAAAACTCCTCTTCTGATTTCTTGCTCTCACCATTAGTTCTTTTTTCTTTACACAAACTCTTCTCGTTTCTTTTTCTTTTCGAAGATTCATCTCTTATGGCCTTTCTTAGGTTTGCTTGCTTTTTGTTGGTTGTTCTTCCTGTTACATCACTCTCCATCATCAAGTTTCATCAACAAGAAGACAAAGATGTAGCTGAAGATAGGGTTGGTTCACTCAAAATGGAACTTCTGAGGAACAATAACATTGGAGGAAGAAGATTAGGAGCAGCGAAAGAGTTCATGGAAATGGAGAATAGCAAAAGCTTTGGAAAGAATGGGTCTAAAGAGAAGATTTCAAATATGGTTTTTTCAAGTGCTTCCAATGAAGAAAATGGCAAAAAGAAGAATAAGAAGAAGGAGGTTTCAAGTTTAGAAACAAAGAAAATGGGAATTAGTGGGTCAACAGTTGTTTATAATAATGCTGATTATTTGACTTATATGCATCACCCACCAAAACATAATTGA

Coding sequence (CDS)

ATGGCCTTTCTTAGGTTTGCTTGCTTTTTGTTGGTTGTTCTTCCTGTTACATCACTCTCCATCATCAAGTTTCATCAACAAGAAGACAAAGATGTAGCTGAAGATAGGGTTGGTTCACTCAAAATGGAACTTCTGAGGAACAATAACATTGGAGGAAGAAGATTAGGAGCAGCGAAAGAGTTCATGGAAATGGAGAATAGCAAAAGCTTTGGAAAGAATGGGTCTAAAGAGAAGATTTCAAATATGGTTTTTTCAAGTGCTTCCAATGAAGAAAATGGCAAAAAGAAGAATAAGAAGAAGGAGGTTTCAAGTTTAGAAACAAAGAAAATGGGAATTAGTGGGTCAACAGTTGTTTATAATAATGCTGATTATTTGACTTATATGCATCACCCACCAAAACATAATTGA

Protein sequence

MAFLRFACFLLVVLPVTSLSIIKFHQQEDKDVAEDRVGSLKMELLRNNNIGGRRLGAAKEFMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKEVSSLETKKMGISGSTVVYNNADYLTYMHHPPKHN*

Homology

[Close]

BLAST of CsGy6G020200 vs. NCBI nr
Match: XP_031743130.1 (uncharacterized protein LOC105435861 isoform X1 [Cucumis sativus])

HSP 1 Score: 253 bits (645), Expect = 2.51e-84
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MAFLRFACFLLVVLPVTSLSIIKFHQQEDKDVAEDRVGSLKMELLRNNNIGGRRLGAAKE 60
           MAFLRFACFLLVVLPVTSLSIIKFHQQEDKDVAEDRVGSLKMELLRNNNIGGRRLGAAKE
Sbjct: 1   MAFLRFACFLLVVLPVTSLSIIKFHQQEDKDVAEDRVGSLKMELLRNNNIGGRRLGAAKE 60

Query: 61  FMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKEVSSLETKKMGISGSTVVYN 120
           FMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKEVSSLETKKMGISGSTVVYN
Sbjct: 61  FMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKEVSSLETKKMGISGSTVVYN 120

Query: 121 NADYLTYMHHPPKHN 135
           NADYLTYMHHPPKHN
Sbjct: 121 NADYLTYMHHPPKHN 135

[Close]

BLAST of CsGy6G020200 vs. NCBI nr
Match: KGN48024.2 (hypothetical protein Csa_003208, partial [Cucumis sativus])

HSP 1 Score: 253 bits (645), Expect = 9.36e-84
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MAFLRFACFLLVVLPVTSLSIIKFHQQEDKDVAEDRVGSLKMELLRNNNIGGRRLGAAKE 60
           MAFLRFACFLLVVLPVTSLSIIKFHQQEDKDVAEDRVGSLKMELLRNNNIGGRRLGAAKE
Sbjct: 40  MAFLRFACFLLVVLPVTSLSIIKFHQQEDKDVAEDRVGSLKMELLRNNNIGGRRLGAAKE 99

Query: 61  FMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKEVSSLETKKMGISGSTVVYN 120
           FMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKEVSSLETKKMGISGSTVVYN
Sbjct: 100 FMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKEVSSLETKKMGISGSTVVYN 159

Query: 121 NADYLTYMHHPPKHN 135
           NADYLTYMHHPPKHN
Sbjct: 160 NADYLTYMHHPPKHN 174

[Close]

BLAST of CsGy6G020200 vs. NCBI nr
Match: XP_031743131.1 (uncharacterized protein LOC105435861 isoform X2 [Cucumis sativus])

HSP 1 Score: 246 bits (628), Expect = 9.50e-82
Identity = 134/135 (99.26%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MAFLRFACFLLVVLPVTSLSIIKFHQQEDKDVAEDRVGSLKMELLRNNNIGGRRLGAAKE 60
           MAFLRFACFLLVVLPVTSLSIIKFHQQ DKDVAEDRVGSLKMELLRNNNIGGRRLGAAKE
Sbjct: 1   MAFLRFACFLLVVLPVTSLSIIKFHQQ-DKDVAEDRVGSLKMELLRNNNIGGRRLGAAKE 60

Query: 61  FMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKEVSSLETKKMGISGSTVVYN 120
           FMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKEVSSLETKKMGISGSTVVYN
Sbjct: 61  FMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKEVSSLETKKMGISGSTVVYN 120

Query: 121 NADYLTYMHHPPKHN 135
           NADYLTYMHHPPKHN
Sbjct: 121 NADYLTYMHHPPKHN 134

[Close]

BLAST of CsGy6G020200 vs. NCBI nr
Match: XP_008445410.1 (PREDICTED: uncharacterized protein LOC103488445 isoform X1 [Cucumis melo])

HSP 1 Score: 222 bits (566), Expect = 2.98e-72
Identity = 124/137 (90.51%), Postives = 127/137 (92.70%), Query Frame = 0


Query: 1   MAFLRFACFLLVVLPVTSLSIIKFHQQEDKDVAEDRVGSLKMELLRNNNIGGRRLGAA-K 60
           MA +RFACFLLVVLPVTSLSIIKFHQQEDKD AEDRVGSLKME LRNNNIGGRRLG   K
Sbjct: 1   MACVRFACFLLVVLPVTSLSIIKFHQQEDKDAAEDRVGSLKMEPLRNNNIGGRRLGVLNK 60

Query: 61  EFMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKEVSSLETKKMGISGSTVV- 120
           E MEMENSKSFGKNGSKEK SNMVFSSA+NEENGKKKN KK+VSSLETKKMGISGSTVV 
Sbjct: 61  ELMEMENSKSFGKNGSKEKTSNMVFSSAANEENGKKKNDKKKVSSLETKKMGISGSTVVV 120

Query: 121 YNNADYLTYMHHPPKHN 135
           YNNADYLTYMHHPPKHN
Sbjct: 121 YNNADYLTYMHHPPKHN 137

[Close]

BLAST of CsGy6G020200 vs. NCBI nr
Match: XP_008445411.1 (PREDICTED: uncharacterized protein LOC103488445 isoform X2 [Cucumis melo])

HSP 1 Score: 216 bits (549), Expect = 1.12e-69
Identity = 123/137 (89.78%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 1   MAFLRFACFLLVVLPVTSLSIIKFHQQEDKDVAEDRVGSLKMELLRNNNIGGRRLGAA-K 60
           MA +RFACFLLVVLPVTSLSIIKFHQQ DKD AEDRVGSLKME LRNNNIGGRRLG   K
Sbjct: 1   MACVRFACFLLVVLPVTSLSIIKFHQQ-DKDAAEDRVGSLKMEPLRNNNIGGRRLGVLNK 60

Query: 61  EFMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKEVSSLETKKMGISGSTVV- 120
           E MEMENSKSFGKNGSKEK SNMVFSSA+NEENGKKKN KK+VSSLETKKMGISGSTVV 
Sbjct: 61  ELMEMENSKSFGKNGSKEKTSNMVFSSAANEENGKKKNDKKKVSSLETKKMGISGSTVVV 120

Query: 121 YNNADYLTYMHHPPKHN 135
           YNNADYLTYMHHPPKHN
Sbjct: 121 YNNADYLTYMHHPPKHN 136

[Close]

BLAST of CsGy6G020200 vs. ExPASy TrEMBL
Match: A0A1S3BDD4 (uncharacterized protein LOC103488445 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488445 PE=4 SV=1)

HSP 1 Score: 222 bits (566), Expect = 1.44e-72
Identity = 124/137 (90.51%), Postives = 127/137 (92.70%), Query Frame = 0


Query: 1   MAFLRFACFLLVVLPVTSLSIIKFHQQEDKDVAEDRVGSLKMELLRNNNIGGRRLGAA-K 60
           MA +RFACFLLVVLPVTSLSIIKFHQQEDKD AEDRVGSLKME LRNNNIGGRRLG   K
Sbjct: 1   MACVRFACFLLVVLPVTSLSIIKFHQQEDKDAAEDRVGSLKMEPLRNNNIGGRRLGVLNK 60

Query: 61  EFMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKEVSSLETKKMGISGSTVV- 120
           E MEMENSKSFGKNGSKEK SNMVFSSA+NEENGKKKN KK+VSSLETKKMGISGSTVV 
Sbjct: 61  ELMEMENSKSFGKNGSKEKTSNMVFSSAANEENGKKKNDKKKVSSLETKKMGISGSTVVV 120

Query: 121 YNNADYLTYMHHPPKHN 135
           YNNADYLTYMHHPPKHN
Sbjct: 121 YNNADYLTYMHHPPKHN 137

[Close]

BLAST of CsGy6G020200 vs. ExPASy TrEMBL
Match: A0A1S3BDI1 (uncharacterized protein LOC103488445 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488445 PE=4 SV=1)

HSP 1 Score: 216 bits (549), Expect = 5.44e-70
Identity = 123/137 (89.78%), Postives = 126/137 (91.97%), Query Frame = 0


Query: 1   MAFLRFACFLLVVLPVTSLSIIKFHQQEDKDVAEDRVGSLKMELLRNNNIGGRRLGAA-K 60
           MA +RFACFLLVVLPVTSLSIIKFHQQ DKD AEDRVGSLKME LRNNNIGGRRLG   K
Sbjct: 1   MACVRFACFLLVVLPVTSLSIIKFHQQ-DKDAAEDRVGSLKMEPLRNNNIGGRRLGVLNK 60

Query: 61  EFMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKEVSSLETKKMGISGSTVV- 120
           E MEMENSKSFGKNGSKEK SNMVFSSA+NEENGKKKN KK+VSSLETKKMGISGSTVV 
Sbjct: 61  ELMEMENSKSFGKNGSKEKTSNMVFSSAANEENGKKKNDKKKVSSLETKKMGISGSTVVV 120

Query: 121 YNNADYLTYMHHPPKHN 135
           YNNADYLTYMHHPPKHN
Sbjct: 121 YNNADYLTYMHHPPKHN 136

[Close]

BLAST of CsGy6G020200 vs. ExPASy TrEMBL
Match: A0A0A0KHA3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G401420 PE=4 SV=1)

HSP 1 Score: 178 bits (451), Expect = 1.22e-55
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 42  MELLRNNNIGGRRLGAAKEFMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKE 101
           MELLRNNNIGGRRLGAAKEFMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKE
Sbjct: 1   MELLRNNNIGGRRLGAAKEFMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKE 60

Query: 102 VSSLETKKMGISGSTVVYNNADYLTYMHHPPKHN 135
           VSSLETKKMGISGSTVVYNNADYLTYMHHPPKHN
Sbjct: 61  VSSLETKKMGISGSTVVYNNADYLTYMHHPPKHN 94

[Close]

BLAST of CsGy6G020200 vs. ExPASy TrEMBL
Match: A0A6J1GIZ1 (uncharacterized protein LOC111454657 OS=Cucurbita moschata OX=3662 GN=LOC111454657 PE=4 SV=1)

HSP 1 Score: 110 bits (276), Expect = 1.02e-28
Identity = 77/138 (55.80%), Postives = 92/138 (66.67%), Query Frame = 0


Query: 1   MAFLRFACFLLVVLPVTSLSIIKFHQQ-EDKDVAE--DRVGSLKMELLRNNNIGGRRLGA 60
           M F+RFACFLLVVLP+TSLSI+KFH+  E KDVA+  D   S + EL+ +NNIGGRR   
Sbjct: 1   MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDVAQARDSFASREKELV-SNNIGGRRRLE 60

Query: 61  AKEFMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKEVSSLETKKMGISGSTV 120
            KE M +E SKS          S M  SS+ N ENGKKK KKK         +G +GS++
Sbjct: 61  VKEGMPLERSKS----------SKMAVSSSFNGENGKKKKKKK---------LG-NGSSL 117

Query: 121 VYNNADYLTYMHHPPKHN 135
           VY NADYLT+MHHPPKHN
Sbjct: 121 VYENADYLTHMHHPPKHN 117

[Close]

BLAST of CsGy6G020200 vs. ExPASy TrEMBL
Match: A0A6J1KPF0 (uncharacterized protein LOC111496054 OS=Cucurbita maxima OX=3661 GN=LOC111496054 PE=4 SV=1)

HSP 1 Score: 106 bits (265), Expect = 4.61e-27
Identity = 74/138 (53.62%), Postives = 89/138 (64.49%), Query Frame = 0


Query: 1   MAFLRFACFLLVVLPVTSLSIIKFHQQ-EDKDVAE--DRVGSLKMELLRNNNIGGRRLGA 60
           M F+RFACFLLVVLP+TSLSI+KFH+  E KDVA+  D   S + ELL +NNIGGRR   
Sbjct: 1   MGFVRFACFLLVVLPITSLSIMKFHRGLEYKDVAQARDSFASHEKELL-SNNIGGRRRLE 60

Query: 61  AKEFMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKEVSSLETKKMGISGSTV 120
            +E M +E+SKS          S M   S+ N ENGKKK KK             +GS++
Sbjct: 61  VQEGMPLESSKS----------SKMAVPSSFNGENGKKKKKKSG-----------NGSSL 116

Query: 121 VYNNADYLTYMHHPPKHN 135
           VY NADYLT+MHHPPKHN
Sbjct: 121 VYENADYLTHMHHPPKHN 116

The following BLAST results are available for this feature:

BLAST of CsGy6G020200 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G020200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031743130.1	2.51e-84	100.00	uncharacterized protein LOC105435861 isoform X1 [Cucumis sativus]	[more]
KGN48024.2	9.36e-84	100.00	hypothetical protein Csa_003208, partial [Cucumis sativus]	[more]
XP_031743131.1	9.50e-82	99.26	uncharacterized protein LOC105435861 isoform X2 [Cucumis sativus]	[more]
XP_008445410.1	2.98e-72	90.51	PREDICTED: uncharacterized protein LOC103488445 isoform X1 [Cucumis melo]	[more]
XP_008445411.1	1.12e-69	89.78	PREDICTED: uncharacterized protein LOC103488445 isoform X2 [Cucumis melo]	[more]

BLAST of CsGy6G020200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BDD4	1.44e-72	90.51	uncharacterized protein LOC103488445 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BDI1	5.44e-70	89.78	uncharacterized protein LOC103488445 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KHA3	1.22e-55	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G401420 PE=4 SV=1	[more]
A0A6J1GIZ1	1.02e-28	55.80	uncharacterized protein LOC111454657 OS=Cucurbita moschata OX=3662 GN=LOC1114546...	[more]
A0A6J1KPF0	4.61e-27	53.62	uncharacterized protein LOC111496054 OS=Cucurbita maxima OX=3661 GN=LOC111496054...	[more]

BLAST of CsGy6G020200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G020200.2	CsGy6G020200.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0009934	regulation of meristem structural organization
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0004722	protein serine/threonine phosphatase activity