![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CsGy6G020020 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAATATAGTTAAAGAGTTTACTATTTTTAAATTACATATTGTTGAAAAGCCAATTGGCATGTTGTTTTTCTTTAGTCCATTCCAAACAAAGACTTTTCAAACTCAATTCAATAACATTCACAACACCTATTCTTCCACATATATATCTATCCCTTTCCCTTCTCCAAAAATCCTCCATATCCATTCCTTTTGCAAATTCTTCGTCGCAAAATCATGGATGTAGAACAAGAAGAGATGCAATTTCTTGGAATCTATGGAATTTTTAGAGAAACTACCAAATTAATCTTCACATGGAGAAGGATTTTCTCCCAAATCACTCTAGCTCTAATTCTCCCTCTCTCCTTCTTGTTCCTCGCTCACATGGAAATCTCCGATCTATTCCTAAGAAAAATCATGTTCGATGAGTTCGTATTGGACCAAACTCAAACCAGTACACCCTCCTTCGATAAACTCTCCGACGTCGTCTCATCCGAGAAGGTCTATTTTTTTCTATTTCAAATCATGTACCTGGTAATCTTCATCGTTCTGTCTCTCCTCTCCACCTCTGCCGTCGTCTACACCGTCGCCTCGATCTACACCGGCCGAGATGTCGCTTTCAAGCCGGTGATGAGCGTCGTTCCGAAGGTATGGAAACGCCTCCTCTTAACATTCCTTTGCGTGTTCATCTCTTTCGTCGGCTACTCCATCGCCAGCCTCCTCGTCATCACGTTCCTCTTCTTCTTCATCATTCTCGCCTTCCGCACGGCCGGCGGCGGTGTGTTCCTCTTTCTCTATGTCGTCCAGATCCTGTACCTCGCCGGCGCCTTCTACCTGACGGCGATCTGGCAGCTGTCGAACGTAATCTCCGTTCTGGAAGATTCGTACGGATTCAAAGCGATGGGGAAAAGCTACGGTTTAGTGAAAGGGAAATTAGGAACATCGGTAGTGATAATTTTGTGTCTCAGCCTTCCTTTGGGAACGGTGCGTTTTGTGTTTGGGCATTTGGTGGTCAGAACGTCGTCGTTAGGGATACTGAGTAAGGGTACTTTGGGAATTTTATGTTTCTTATTGTTTTTCATTTTCTTTTTGTTGAAGCTAGTGACGGAGACGGTGTTGTATTTCGTTTGCAAATCATACCATCATGAAAATATTGACAAGTCTGCCCTTTCAGATCATCTTGAGGTGTATTTGTTGGGAGAGTACGTGCCTTTGAGGCCTAGGGATGTTCAACTTGAGAAATTCCAAGTTTGAATATGGAATATGTATGTAATCATAGGTTTATGTCATGATTTCAATTGGATTATTGAGTTTTAATTAATTATCTGAAATTAACTCCTTTTATTTTTTGACTTTTCATCATGAGAAGAACTATATATACGTGAATTATAGGTAATATTGAAGCCTATTTGCTATGTACACAATTATTCTGTTAAAATTGAGGTTTATTTCTAACTCATACCATCATATTTGAGTCGAATATGATTGGATATTTGAAGATTTAAGATTAAATGTACACGATAAAAAAATTAAGACATTTATAAGAAGTTGATTGTGTAAGAGCAATTCAACTTACTCTCTAATCTATATCCTTCCAACTTTTTTTTTCTAGAAAAACATTTATAAAACCCTAGTGGAATTTTAAGGGTAAAAATGAAGAAAAAAAATGTTTGTAGCCCCACTGTATAATTAATTAGTTAAATGTGCAAATAAAAACTCTTAGTCATATTTCAAAAGCATTTGTACAACTTAGCTATCAAAGATGAAGGAGCTTTAACAAAGATGGCCAAAATTGGTATACCATATTACATTACATCATGGATCTAATATTTCTATATTTTTCACAAATGTCTTAAATGGACTTTTACATAGTACATACAAATATGGCCCAATTTTCGAATTTTACATAGCACATAAAAAAAATATGGCCCAATTTACGAATCTACTCATTGGTATTATCAATTAGATATTTAAAAAATAATAATAATAAGGAAGGTGAAAGGACAACGAGGCAAATTAGGAACGTGGGTTACAGTTTAGGCATTTTCAAAAAATGGAAGAAACTTTCCTTTCTCGACAACAACACAATATTCCTTCCATTCTCTTCACAAAAGAAGCCGGATAGTAGAAGATTTGGAGAAATATACACGGTGAAGAAGAAGAACCTCGACGACCGGCTAAAACCAGTGAAGTTTTGAAACATTTTCGACAAAAATATCTGGTTAGTAAAAGTTTATATTTCGTATCCGAAATACATTAGGGTATATTATATTGAGTATATTGAAGATATTCACACACTATGAGACATCAATCGAACAAAATGATTATGGAGATTGTGAATGCAAAAAAATTAGGGTTTCTTCAGTTTTAAAGTATCCAAATTTCGACTGTTGAAGACAATTTTAAAATCGTTTAGTATATTTGAAATATGTAGTATAATTTCTAATAAATTATTTGTGAACTGAGAAAGAGTTTAAAATAAGAGTTGTAACTGTATTTAGATTTATATATGATGTGTTAAATGAACATGTAGTTCATAAAATGGTTCGTAGAAGTGAAAGAGTCATTGGATCAAGGACTAGGACTATCAAATCAAACAATGATGATCCGATAGTTATTGATGATGCAGAGGTATATGTTATGTTCTATGTTGTAAGTTTTTAAAATATATGGTATATTCTATGTGGCAGATCAGGGATATGGATTATAATTATATCGTGTTCGTATAATTATGTAGGAGGAAAACAATATCACTTCTAACTCTCAAGATTATGAAGAGAGTTATGAGGAAGAACCGAGGGACTACCAACCTCTACAGTTAATGTTCCCAGGGGATGATGAATATGATATAAGTTGACCAAATGGAACACAAATATAGTTGGATACGATGAGAAAAGTACAGTGAAACCCGACATAGTTCTGGAAACACGTGAGAAAAGAATGCCTAGACATGATAAAGAGGTATGTTGATTTGTATATATTATAATAAAGGTAGTATATATATTAAGTTATCTTATATGAGATAGGGGTGTTCACTGTTCGGTTTGGTCTGATTTGAAGCTAGCTAAAACCGCACCGAACCGCAAAATGAAAAAAAAAAATCTTATTTGAAACCGAACCGAACCGTTTATGTGTGTCAAACCGAATGGAAACCAAACCACATATGCATCATAAAACTGAATCAAAACGAACCGCTTATACAAAGTTACAAACATAGAAATTTCAAAATTACATGACATAAATGTTTCAAACATTGAAATTTGAAATTCCATCAAAACATAGAAGTTTCAAAATTCACTTAAGATAAATAAAAGTCATGCAGTCATACAAACTTCGTCAAGACAACTTGTCATTTACGTTTTGATTATGCCATTCTTCTCTTTCTCGTTCCTC GAAATATAGTTAAAGAGTTTACTATTTTTAAATTACATATTGTTGAAAAGCCAATTGGCATGTTGTTTTTCTTTAGTCCATTCCAAACAAAGACTTTTCAAACTCAATTCAATAACATTCACAACACCTATTCTTCCACATATATATCTATCCCTTTCCCTTCTCCAAAAATCCTCCATATCCATTCCTTTTGCAAATTCTTCGTCGCAAAATCATGGATGTAGAACAAGAAGAGATGCAATTTCTTGGAATCTATGGAATTTTTAGAGAAACTACCAAATTAATCTTCACATGGAGAAGGATTTTCTCCCAAATCACTCTAGCTCTAATTCTCCCTCTCTCCTTCTTGTTCCTCGCTCACATGGAAATCTCCGATCTATTCCTAAGAAAAATCATGTTCGATGAGTTCGTATTGGACCAAACTCAAACCAGTACACCCTCCTTCGATAAACTCTCCGACGTCGTCTCATCCGAGAAGGTCTATTTTTTTCTATTTCAAATCATGTACCTGGTAATCTTCATCGTTCTGTCTCTCCTCTCCACCTCTGCCGTCGTCTACACCGTCGCCTCGATCTACACCGGCCGAGATGTCGCTTTCAAGCCGGTGATGAGCGTCGTTCCGAAGGTATGGAAACGCCTCCTCTTAACATTCCTTTGCGTGTTCATCTCTTTCGTCGGCTACTCCATCGCCAGCCTCCTCGTCATCACGTTCCTCTTCTTCTTCATCATTCTCGCCTTCCGCACGGCCGGCGGCGGTGTGTTCCTCTTTCTCTATGTCGTCCAGATCCTGTACCTCGCCGGCGCCTTCTACCTGACGGCGATCTGGCAGCTGTCGAACGTAATCTCCGTTCTGGAAGATTCGTACGGATTCAAAGCGATGGGGAAAAGCTACGGTTTAGTGAAAGGGAAATTAGGAACATCGGTAGTGATAATTTTGTGTCTCAGCCTTCCTTTGGGAACGGTGCGTTTTGTGTTTGGGCATTTGGTGGTCAGAACGTCGTCGTTAGGGATACTGAGTAAGGGTACTTTGGGAATTTTATGTTTCTTATTGTTTTTCATTTTCTTTTTGTTGAAGCTAGTGACGGAGACGGTGTTGTATTTCGTTTGCAAATCATACCATCATGAAAATATTGACAAGTCTGCCCTTTCAGATCATCTTGAGGTGTATTTGTTGGGAGAGTACGTGCCTTTGAGGCCTAGGGATGTTCAACTTGAGAAATTCCAAGTTTGAATATGGAATATGTATGTAATCATAGGTTTATGTCATGATTTCAATTGGATTATTGAGTTTTAATTAATTATCTGAAATTAACTCCTTTTATTTTTTGACTTTTCATCATGAGAAGAACTATATATACGTGAATTATAGGTAATATTGAAGCCTATTTGCTATGTACACAATTATTCTGTTAAAATTGAGGTTTATTTCTAACTCATACCATCATATTTGAGTCGAATATGATTGGATATTTGAAGATTTAAGATTAAATGTACACGATAAAAAAATTAAGACATTTATAAGAAGTTGATTGTGTAAGAGCAATTCAACTTACTCTCTAATCTATATCCTTCCAACTTTTTTTTTCTAGAAAAACATTTATAAAACCCTAGTGGAATTTTAAGGGTAAAAATGAAGAAAAAAAATGTTTGTAGCCCCACTGTATAATTAATTAGTTAAATGTGCAAATAAAAACTCTTAGTCATATTTCAAAAGCATTTGTACAACTTAGCTATCAAAGATGAAGGAGCTTTAACAAAGATGGCCAAAATTGGTATACCATATTACATTACATCATGGATCTAATATTTCTATATTTTTCACAAATGTCTTAAATGGACTTTTACATAGTACATACAAATATGGCCCAATTTTCGAATTTTACATAGCACATAAAAAAAATATGGCCCAATTTACGAATCTACTCATTGGTATTATCAATTAGATATTTAAAAAATAATAATAATAAGGAAGGTGAAAGGACAACGAGGCAAATTAGGAACGTGGGTTACAGTTTAGGCATTTTCAAAAAATGGAAGAAACTTTCCTTTCTCGACAACAACACAATATTCCTTCCATTCTCTTCACAAAAGAAGCCGGATAGTAGAAGATTTGGAGAAATATACACGGTGAAGAAGAAGAACCTCGACGACCGGCTAAAACCAGTGAAGTTTTGAAACATTTTCGACAAAAATATCTGGAGGAAAACAATATCACTTCTAACTCTCAAGATTATGAAGAGAGTTATGAGGAAGAACCGAGGGACTACCAACCTCTACAGTTAATGTTCCCAGGGGATGATGAATATGATATAAGTTGACCAAATGGAACACAAATATAGTTGGATACGATGAGAAAAGTACAGTGAAACCCGACATAGTTCTGGAAACACGTGAGAAAAGAATGCCTAGACATGATAAAGAGGTATGTTGATTTGTATATATTATAATAAAGGTAGTATATATATTAAGTTATCTTATATGAGATAGGGGTGTTCACTGTTCGGTTTGGTCTGATTTGAAGCTAGCTAAAACCGCACCGAACCGCAAAATGAAAAAAAAAAATCTTATTTGAAACCGAACCGAACCGTTTATGTGTGTCAAACCGAATGGAAACCAAACCACATATGCATCATAAAACTGAATCAAAACGAACCGCTTATACAAAGTTACAAACATAGAAATTTCAAAATTACATGACATAAATGTTTCAAACATTGAAATTTGAAATTCCATCAAAACATAGAAGTTTCAAAATTCACTTAAGATAAATAAAAGTCATGCAGTCATACAAACTTCGTCAAGACAACTTGTCATTTACGTTTTGATTATGCCATTCTTCTCTTTCTCGTTCCTC ATGGATGTAGAACAAGAAGAGATGCAATTTCTTGGAATCTATGGAATTTTTAGAGAAACTACCAAATTAATCTTCACATGGAGAAGGATTTTCTCCCAAATCACTCTAGCTCTAATTCTCCCTCTCTCCTTCTTGTTCCTCGCTCACATGGAAATCTCCGATCTATTCCTAAGAAAAATCATGTTCGATGAGTTCGTATTGGACCAAACTCAAACCAGTACACCCTCCTTCGATAAACTCTCCGACGTCGTCTCATCCGAGAAGGTCTATTTTTTTCTATTTCAAATCATGTACCTGGTAATCTTCATCGTTCTGTCTCTCCTCTCCACCTCTGCCGTCGTCTACACCGTCGCCTCGATCTACACCGGCCGAGATGTCGCTTTCAAGCCGGTGATGAGCGTCGTTCCGAAGGTATGGAAACGCCTCCTCTTAACATTCCTTTGCGTGTTCATCTCTTTCGTCGGCTACTCCATCGCCAGCCTCCTCGTCATCACGTTCCTCTTCTTCTTCATCATTCTCGCCTTCCGCACGGCCGGCGGCGGTGTGTTCCTCTTTCTCTATGTCGTCCAGATCCTGTACCTCGCCGGCGCCTTCTACCTGACGGCGATCTGGCAGCTGTCGAACGTAATCTCCGTTCTGGAAGATTCGTACGGATTCAAAGCGATGGGGAAAAGCTACGGTTTAGTGAAAGGGAAATTAGGAACATCGGTAGTGATAATTTTGTGTCTCAGCCTTCCTTTGGGAACGGTGCGTTTTGTGTTTGGGCATTTGGTGGTCAGAACGTCGTCGTTAGGGATACTGAGTAAGGGTACTTTGGGAATTTTATGTTTCTTATTGTTTTTCATTTTCTTTTTGTTGAAGCTAGTGACGGAGACGGTGTTGTATTTCGTTTGCAAATCATACCATCATGAAAATATTGACAAGTCTGCCCTTTCAGATCATCTTGAGGTGTATTTGTTGGGAGAGTACGTGCCTTTGAGGCCTAGGGATGTTCAACTTGAGAAATTCCAAGTTTGA MDVEQEEMQFLGIYGIFRETTKLIFTWRRIFSQITLALILPLSFLFLAHMEISDLFLRKIMFDEFVLDQTQTSTPSFDKLSDVVSSEKVYFFLFQIMYLVIFIVLSLLSTSAVVYTVASIYTGRDVAFKPVMSVVPKVWKRLLLTFLCVFISFVGYSIASLLVITFLFFFIILAFRTAGGGVFLFLYVVQILYLAGAFYLTAIWQLSNVISVLEDSYGFKAMGKSYGLVKGKLGTSVVIILCLSLPLGTVRFVFGHLVVRTSSLGILSKGTLGILCFLLFFIFFLLKLVTETVLYFVCKSYHHENIDKSALSDHLEVYLLGEYVPLRPRDVQLEKFQV* Homology
BLAST of CsGy6G020020 vs. NCBI nr
Match: XP_011657442.1 (uncharacterized protein LOC105435860 [Cucumis sativus] >KGN47743.1 hypothetical protein Csa_002824 [Cucumis sativus]) HSP 1 Score: 624 bits (1608), Expect = 2.17e-224 Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0
BLAST of CsGy6G020020 vs. NCBI nr
Match: XP_008466696.1 (PREDICTED: uncharacterized protein LOC103504045 [Cucumis melo] >KAA0059844.1 putative transmembrane protein [Cucumis melo var. makuwa] >TYK24798.1 putative transmembrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 608 bits (1569), Expect = 1.90e-218 Identity = 328/338 (97.04%), Postives = 333/338 (98.52%), Query Frame = 0
BLAST of CsGy6G020020 vs. NCBI nr
Match: XP_038885722.1 (uncharacterized protein LOC120076017 [Benincasa hispida]) HSP 1 Score: 588 bits (1515), Expect = 3.21e-210 Identity = 319/338 (94.38%), Postives = 327/338 (96.75%), Query Frame = 0
BLAST of CsGy6G020020 vs. NCBI nr
Match: XP_023535682.1 (uncharacterized protein LOC111797043 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 558 bits (1438), Expect = 1.72e-198 Identity = 298/338 (88.17%), Postives = 316/338 (93.49%), Query Frame = 0
BLAST of CsGy6G020020 vs. NCBI nr
Match: KAG7025019.1 (hypothetical protein SDJN02_13841, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 558 bits (1438), Expect = 1.64e-192 Identity = 298/338 (88.17%), Postives = 316/338 (93.49%), Query Frame = 0
BLAST of CsGy6G020020 vs. ExPASy TrEMBL
Match: A0A0A0KDW0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G398200 PE=4 SV=1) HSP 1 Score: 624 bits (1608), Expect = 1.05e-224 Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0
BLAST of CsGy6G020020 vs. ExPASy TrEMBL
Match: A0A5D3DMI0 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00460 PE=4 SV=1) HSP 1 Score: 608 bits (1569), Expect = 9.19e-219 Identity = 328/338 (97.04%), Postives = 333/338 (98.52%), Query Frame = 0
BLAST of CsGy6G020020 vs. ExPASy TrEMBL
Match: A0A1S3CRV6 (uncharacterized protein LOC103504045 OS=Cucumis melo OX=3656 GN=LOC103504045 PE=4 SV=1) HSP 1 Score: 608 bits (1569), Expect = 9.19e-219 Identity = 328/338 (97.04%), Postives = 333/338 (98.52%), Query Frame = 0
BLAST of CsGy6G020020 vs. ExPASy TrEMBL
Match: A0A6J1J254 (uncharacterized protein LOC111480627 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480627 PE=4 SV=1) HSP 1 Score: 511 bits (1316), Expect = 3.13e-180 Identity = 276/337 (81.90%), Postives = 298/337 (88.43%), Query Frame = 0
BLAST of CsGy6G020020 vs. ExPASy TrEMBL
Match: A0A6J1DLG5 (uncharacterized protein LOC111021149 OS=Momordica charantia OX=3673 GN=LOC111021149 PE=4 SV=1) HSP 1 Score: 497 bits (1279), Expect = 1.29e-174 Identity = 271/338 (80.18%), Postives = 297/338 (87.87%), Query Frame = 0
BLAST of CsGy6G020020 vs. TAIR 10
Match: AT4G19950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44860.1); Has 338 Blast hits to 330 proteins in 72 species: Archae - 2; Bacteria - 94; Metazoa - 7; Fungi - 0; Plants - 232; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 177.6 bits (449), Expect = 1.7e-44 Identity = 136/342 (39.77%), Postives = 192/342 (56.14%), Query Frame = 0
BLAST of CsGy6G020020 vs. TAIR 10
Match: AT5G44860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 233 Blast hits to 227 proteins in 25 species: Archae - 0; Bacteria - 13; Metazoa - 1; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 173.3 bits (438), Expect = 3.3e-43 Identity = 130/342 (38.01%), Postives = 189/342 (55.26%), Query Frame = 0
BLAST of CsGy6G020020 vs. TAIR 10
Match: AT1G31130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in 29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ) HSP 1 Score: 164.1 bits (414), Expect = 2.0e-40 Identity = 125/339 (36.87%), Postives = 185/339 (54.57%), Query Frame = 0
BLAST of CsGy6G020020 vs. TAIR 10
Match: AT2G18680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G18690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 4.9e-07 Identity = 84/280 (30.00%), Postives = 137/280 (48.93%), Query Frame = 0
BLAST of CsGy6G020020 vs. TAIR 10
Match: AT2G18690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF975 (InterPro:IPR010380); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G18680.1); Has 213 Blast hits to 211 proteins in 20 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 205; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.8 bits (120), Expect = 2.4e-06 Identity = 79/308 (25.65%), Postives = 141/308 (45.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|