CsGy6G019900 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G019900
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	RAS-related protein RABC1
Location	Gy14Chr6: 20533415 .. 20538240 (-)
RNA-Seq Expression	CsGy6G019900
Synteny	CsGy6G019900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACAGAGAAACGAATCAATCGGTGAGAGAAGAAAGTTTTTGAATTCAGAGTGAAGAGTCATTTCAAAGCTTTCTCCAATCTCTCTCGCTCTAATCATACTCAGTGAGTCTTCCAGATTACTATTTGATTCACTGTTTATTTTCCTCTTTCTCTGTAATTGTACTTGCTTTTTTTATTGATCGTGAAATTGATTGAAAGCTTGAATTTGTTGATTAAGGTGTTTATAATGTCGTCCGCACCGTCTTCGAGTCAACCGGAGTTTGATTACTTATTTAAGTTGCTGTTGATTGGTGATTCCGGTGTAGGGAAGAGTACTCTTCTTTTGCGCTTTACCTCTGATTCCTTTGAGGATCTTTCTCCAACTATTGGTACGCCTCTCATTTCTACTTTCGTTTCGAAGTGTTCAAAATTTGGATTGAGCCTTGTGTATTATCGGGTTGAACTGAAGTTGTATTGAATTTCGTTAGTAGAAAGATTAAGGCCTTGCTTGATAACCGTTGATGTTCAGTTCTTATAGATATGTTTTTTAAAATCTAAAGGAAACTTTTGAAATTTGAAAAGGAATTTTGTGAACTTTTTGTTTTCTATAAAATAATATTTGGCGAAGAATTCAAATGTATTTAAGAGTGAAAAACATATGAAAGAGTTGTGTGGAAGCAAGCACAATTGTCTTGAAAAGACAGGTGAAGGAACAATTACTCTTGGATCATGGCTTGACATAAAATTTTATGAGACAAATGCGCCTCTAAAGTATCCATCAAACTGTCCCACATTGAATCTACGAGATGACAACAACTCGACCCTACATGATCCATTTCCTTAGAAGTACCCTTACAACATATTGAGGCTCCATTGGCTTGTAAATGATCTCTGGATAAGGTCAATAGTGATAATACTTCTGTGTAAGATTTACCAAATGTAGATTTTTTTTTATCTTCTGTAGATTTTAACCTTCCATAGTTAGTAAATAAATATAAAGGATTTATAGTTAAACTTTTTGGACGATTAGGGGTAACAAACGAGCATACCTATCTTTCGCCAAAGAAACAAACCTAGTAGCCAACATAAAGCAAAGAGAAACAATGAAACCACTCCATTGGACGGGATGGCCAGGATTGGATAAAAGCTGCAAAGGGATATTTTAATGAAGAGAGGTGATAAAGACGAAGGTAAATGCGGCAAAGAGAACTATCCCCAACCTCTGATCCTCCCAACCAATTCAGGGTCCTTTTTGTTACTGATTTGGTTTTCGGTTTGAAATATTTTATTTACATCAGTGAAATATTCTCTTGTTTCTAATAGAAAAGATTATTTTATGGTTCAAATTCTTACATATTAGATTGATACTTATTCTCTACATAACTTTTAGGTGTTGATTTCAAGATCAAGCATGTTACAGTTGGGGGCAAGAAGTTGAAGCTTGCGATATGGGATACAGGTGAATATTTTCCATTTTTTTTCAGGCTATGTGCACGTGTGTAAACATGATAGGGGAAAAGAAATGGTGCCTTATGATTTATTTCGGTCATCTTTTGGTTTCACCAGTTGTGTTATATTGTTCTGTATTTTAATTTATATCTTTTAATTTTTATGCTAGATGTGCATTTAACATATTTCTGAAGACTACAGAAGTATTTGTGAAGTTTCTTATTTTATGAAATTTTTATCCTGAATCAATTTCCTTCGACTTTAACATACATATCCTGTAAATATATTAGAAGTGTGAAATTATAGGGGATAGATTAACATACACCTCTGACCAAACAGTGTCTTGGATGTTTCATGCACACAAAATTACACTAATTGATTAATCATCCTATTCGGAAATAGTGCTGTTGAAAATTGTTGTTGTACGATTCCCGTAGATAAGGGTGGATTTACCTATACTTGCTGCCCATGGCTTAGAATCTTTGGAGCTGTCATGAATGTAAGGTTTTACTGGTCATCTTGTGATATGATACTGTTGTCGGAAATTATTAGGAAGGAATAAATAAAGGACGCCATCAAAACAGTTTCTGTTTTGCAATGAAAGGAAGAAAGAAACACTGGTGAAAAACCAAAAAGTAGGACGTCATCTTTTTAGTGCCTGCTTAGGACTTACTATGACAGTGTCTGAATATATAGGGGAAAAAAGAAGAAGAAAAGGTCTCAGTGATTAGCTGAGACATGAGGTATGTTGCATTCTACTCGATGTAATGTATCTCGGCACTGTTATCGTATGATGAAATTGATTCAGTGGGTACCTACATTTTGAGGTCTATTTGGTAATGCCATTCTGTGGCAAACTTGATAATTAAGAAATTACAACTTTAATACGTTTATTTTAATAGAAGTTTAAATCTTATTCTGTTACTGATTGTCTACCTGAATTTTATTTAAATGGTCCCTACTTGTAGCTGGGCAGGAGAGGTTTCGAACCCTAACAGGTTCATACTACAGAGGAGCTCAAGGAATCATTATGGGTATCTTCTATTGATTTCATTCTTTCTATCTATATTTCAAATACTAGTTTTGCATCTAACAAGTCCTTCAACTTTCAATTTTGTGTCTAATAAGTAATTGGCTATTCACTAATATACTTTTACATTCATAAGTTAAATTAATGAGCTGGAAACATTAGACACAAGCTGCTAGATTGTATGTATTACCTTCGAGCTTTTCTTCCCCTTAAAATATAAGAAACCCTGTACTATATATATATTAACAAAAGAGAGCAGGAATTCTCAGAATCTCAGACACAAACCTTTAGATCGTGTATACTACTTTACAGAAGGTTTGATTAACCCAACAACTGCCTTTTTCTTGTTGTAAAATGTTTCCAGCTCATCATTCTGATTTTAGGGATGATCTGTTTTGATAAATTTTTATTCTGGATTATTTTTCATTTTATTCAAGTACTCATTCTCTAACTGACCTAACATTTTTACAATTAGTGTATGATGTGACACGGCGAGAGACATTCACAAATCTGTCTGACATATGGGCTAAAGAAATTGATCTGTACTCAACAAATCAGGATTGCATTAAGATGCTTGTTGGAAACAAAGTGGATAAGGTATGCTTTTTAAATCTGAGGAACTTCATTAGTAAATAGTAATTACCTTGTTCAATGTAGTTCTTTTAGCATCTTGGTCCAGTGCTACCCTGCCCTATGTAGCTAACTACAGATCTAAGTCTAAATTTCCAGCTAGTTAGTGCCAAATATATTATATAGATCTATGGCGCTGTTTGGCATGCTGAGTTGAGTCATGAAGTTTGAAATTAATGTTTGTGGAGTTAACATGTGTGTGTTAGACCACCAATAATTCTACAATATAGTAGAAGAGAAAAAAAAAGAATAATACGTGTGAAGGAGAGTACAAGTGAAGGGGGGACCACAGGGTAGAGTTAACCAGTATAAATAGAAAAATAAAAGAGAGGGAAAAGTAGTTAGTATCTGGTGAGTGATTTCTGTTGTATTCGTGAGAGATATGGTAACAGAATTGGGAAGAGTTCTCTGTTCATCAAATTGAAATTACATTCAATTCGATTTTCTTCATTGTAATTCCTATATTACTATCATCAATAAAGATTGGAAATCATCTTCATTGTGAATTTGTGTTGGAAATCAAGCTCCAACAGTGTGTGGAGTTGGGAAGTCTATGTTTGAATTGTAGAGTTTTTTTTTAGTATGTAGTTGGTCATTGATGATCGCCAATGGGTGGAGTCATTGAACCATTAATGTGAACACTTCAATAATGAACGTTGTAGAAGTTGGTGAAGTTGAGTTATTTGACAAGTCGTTTGTTGGACCAAACAATTGAGTTATAAACTCAACTCAAGTCAATATCCGAAACATCCCCTATATTTTCTACTGATCTTGGGTTGTGTTTCTTGGATACGAATTTGATATTCTCTTATCTGGATAAAGTAACCCCTATTCTTAACGTTAGATATTTAGCAATTTGTGGGTGATCTGAAAGTGGTTTCCTTGTTTTTTAACGCGTATGGTAGAAAATTTAGAATGTGAAATACTAAAACCTGTTTCAATTTTACATTTCTGAGTTACAAAATCCAAATATTGTTTTTGGACATCATCCACTAAACACAAATTTGCTAAATTCATGTCAGATTAAGAAATTGAATTAGATAAGATGCCAGAACCTTAAAGTCAAGTGATCTAATATTTCAGGAAAGTGAACGTGTAGTCAGTAAAAAAGAGGGAATTGACTTTGCTCGAGAATATGGCTGCCTATTTCTCGAATGCAGTGCAAAAACTCGGGTCAATGTGGAGCAATGCTTTGATGAGCTTGTGTTGAAGGTACGGGAAAACTTGAAACACTTTCGTGCTTCCCATATAATATAACGCTTAATACAAATTGTGGAGTTGTAGTTCAAGAGTTTAATTGTATTATATTTAAACTTACTACTAGTGTGCTGCCCCAAAATAATGTGTTTGCAGATATTGGACACCCCCAGTCTTTTGGCTGATGGCTCAACAGGTTTGAAAAAGAATATCTTCAAAGAGAAACCTCCCGAAACGACCACATCAGCTGGTGGCTGCTGCTCTTATTGATTTATATACTAAAAATTGTAGGAGCATTCTCATTTTGTCTTAGGCTACTCGTTCCATAGTTATTCCATTTCAGCACACACCCTAAAGGGGATCTTCAGATTAACCTTGATGGATTGTTAGTTCGTTAAACTAAAATGTCTGCTCGACACTAAGTTTCTTGTATTCTTTCAGTCGTTCTTTCTAGGTTGACATTTAATTTGTTCTTTCTGGTTTGAGTTTGATTTATTATGAACTTACAAAGTCACATATGAAAACAGATCCTGAAATCCTA

mRNA sequence

TACAGAGAAACGAATCAATCGGTGAGAGAAGAAAGTTTTTGAATTCAGAGTGAAGAGTCATTTCAAAGCTTTCTCCAATCTCTCTCGCTCTAATCATACTCAGTGTTTATAATGTCGTCCGCACCGTCTTCGAGTCAACCGGAGTTTGATTACTTATTTAAGTTGCTGTTGATTGGTGATTCCGGTGTAGGGAAGAGTACTCTTCTTTTGCGCTTTACCTCTGATTCCTTTGAGGATCTTTCTCCAACTATTGGTGTTGATTTCAAGATCAAGCATGTTACAGTTGGGGGCAAGAAGTTGAAGCTTGCGATATGGGATACAGCTGGGCAGGAGAGGTTTCGAACCCTAACAGGTTCATACTACAGAGGAGCTCAAGGAATCATTATGGTGTATGATGTGACACGGCGAGAGACATTCACAAATCTGTCTGACATATGGGCTAAAGAAATTGATCTGTACTCAACAAATCAGGATTGCATTAAGATGCTTGTTGGAAACAAAGTGGATAAGGAAAGTGAACGTGTAGTCAGTAAAAAAGAGGGAATTGACTTTGCTCGAGAATATGGCTGCCTATTTCTCGAATGCAGTGCAAAAACTCGGGTCAATGTGGAGCAATGCTTTGATGAGCTTGTGTTGAAGATATTGGACACCCCCAGTCTTTTGGCTGATGGCTCAACAGGTTTGAAAAAGAATATCTTCAAAGAGAAACCTCCCGAAACGACCACATCAGCTGGTGGCTGCTGCTCTTATTGATTTATATACTAAAAATTGTAGGAGCATTCTCATTTTGTCTTAGGCTACTCGTTCCATAGTTATTCCATTTCAGCACACACCCTAAAGGGGATCTTCAGATTAACCTTGATGGATTGTTAGTTCGTTAAACTAAAATGTCTGCTCGACACTAAGTTTCTTGTATTCTTTCAGTCGTTCTTTCTAGGTTGACATTTAATTTGTTCTTTCTGGTTTGAGTTTGATTTATTATGAACTTACAAAGTCACATATGAAAACAGATCCTGAAATCCTA

Coding sequence (CDS)

ATGTCGTCCGCACCGTCTTCGAGTCAACCGGAGTTTGATTACTTATTTAAGTTGCTGTTGATTGGTGATTCCGGTGTAGGGAAGAGTACTCTTCTTTTGCGCTTTACCTCTGATTCCTTTGAGGATCTTTCTCCAACTATTGGTGTTGATTTCAAGATCAAGCATGTTACAGTTGGGGGCAAGAAGTTGAAGCTTGCGATATGGGATACAGCTGGGCAGGAGAGGTTTCGAACCCTAACAGGTTCATACTACAGAGGAGCTCAAGGAATCATTATGGTGTATGATGTGACACGGCGAGAGACATTCACAAATCTGTCTGACATATGGGCTAAAGAAATTGATCTGTACTCAACAAATCAGGATTGCATTAAGATGCTTGTTGGAAACAAAGTGGATAAGGAAAGTGAACGTGTAGTCAGTAAAAAAGAGGGAATTGACTTTGCTCGAGAATATGGCTGCCTATTTCTCGAATGCAGTGCAAAAACTCGGGTCAATGTGGAGCAATGCTTTGATGAGCTTGTGTTGAAGATATTGGACACCCCCAGTCTTTTGGCTGATGGCTCAACAGGTTTGAAAAAGAATATCTTCAAAGAGAAACCTCCCGAAACGACCACATCAGCTGGTGGCTGCTGCTCTTATTGA

Protein sequence

MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLADGSTGLKKNIFKEKPPETTTSAGGCCSY*

Homology

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BLAST of CsGy6G019900 vs. ExPASy Swiss-Prot
Match: O23657 (Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 3.6e-101
Identity = 179/208 (86.06%), Postives = 196/208 (94.23%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKL 65
           SS QPEFDYLFK+LLIGDSGVGKS+LLL FTS++F+DLSPTIGVDFK+K++T+G KKLKL
Sbjct: 4   SSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 125
           AIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRR+TFTNLSDIWAKEIDLYSTNQDCIKM
Sbjct: 64  AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVDKESER VSKKEGIDFAREYGCLFLECSAKTRVNVEQCF+ELVLKIL+TPSL A
Sbjct: 124 LVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLTA 183

Query: 186 DGSTGLKKNIFKEKPPETT-TSAGGCCS 213
           +GS+G KKNIFK+ P +TT TS+  CCS
Sbjct: 184 EGSSGGKKNIFKQNPAQTTSTSSSYCCS 211

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BLAST of CsGy6G019900 vs. ExPASy Swiss-Prot
Match: O49841 (Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.6e-85
Identity = 148/207 (71.50%), Postives = 176/207 (85.02%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKL 65
           SS Q  +D  FK+LLIGDSGVGKS+LL+ F S S EDL+PTIGVDFKIK +TVGGK+LKL
Sbjct: 4   SSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 125
            IWDTAGQERFRTLT SYYRGAQGII+VYDVTRRETFTNL D+W KEI+LYSTNQ+C++M
Sbjct: 64  TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVD+ESER VS++EGI  A+E  C+FLECSA+TR NVEQCF+EL LKI++ PSLL 
Sbjct: 124 LVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPSLLE 183

Query: 186 DGSTGLKKNIFKEKPPETTTSAGGCCS 213
           +GS+ +K+NI K+KP   T +  GCCS
Sbjct: 184 EGSSAVKRNILKQKPEHQTNTQSGCCS 210

[Close]

BLAST of CsGy6G019900 vs. ExPASy Swiss-Prot
Match: Q9SF92 (Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 4.4e-75
Identity = 137/207 (66.18%), Postives = 165/207 (79.71%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKL 65
           SS Q  +D  FK+LLIGDSGVGKS+LLL F S S EDL+PTIGVDFKIK + V GK+LKL
Sbjct: 4   SSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKRLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 125
            IWDTAGQE+FRTLT SY+RG+QGII+VYDVT+RETF NL+DIWAKEI+LYSTN DCIKM
Sbjct: 64  TIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVD+ESER VS++EG+  A++  CLF ECSA+TR NV  CF+EL LKI++ PSLL 
Sbjct: 124 LVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPSLLE 183

Query: 186 DGSTGLKKNIFKEKPPETTTSAGGCCS 213
           +GS+ +K+       P+     G CCS
Sbjct: 184 EGSSSVKRK------PDYRAHQGRCCS 204

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BLAST of CsGy6G019900 vs. ExPASy Swiss-Prot
Match: P36862 (GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.2e-59
Identity = 113/179 (63.13%), Postives = 138/179 (77.09%), Query Frame = 0


Query: 13  DYLFKLLLIGDSGVGKSTLLLRFTSDSFED-LSPTIGVDFKIKHVTVGGKKLKLAIWDTA 72
           DY FK+LL+GDSGVGKS +L RFTS  FE+  + TIGVDFK+K++T  GK+ KL IWDTA
Sbjct: 7   DYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWDTA 66

Query: 73  GQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKV 132
           GQERFRTLT SYYRGAQGII VYDVTRR+TF +L   W +E D+YST +  IKM+V NKV
Sbjct: 67  GQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVANKV 126

Query: 133 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLADGSTG 191
           D  ++R VS +EG DFAR +GCLF+E SA+  + V Q F+EL+LKILDTP LL   + G
Sbjct: 127 DLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLETTAVG 185

[Close]

BLAST of CsGy6G019900 vs. ExPASy Swiss-Prot
Match: Q5ZLG1 (Ras-related protein Rab-18 OS=Gallus gallus OX=9031 GN=RAB18 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.8e-55
Identity = 111/197 (56.35%), Postives = 142/197 (72.08%), Query Frame = 0


Query: 17  KLLLIGDSGVGKSTLLLRFTSDSFE-DLSPTIGVDFKIKHVTVGGKKLKLAIWDTAGQER 76
           K+L+IG+SGVGKS+LLLRFT D+F+ +L+ TIGVDFK+K ++V G K KLAIWDTAGQER
Sbjct: 10  KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 69

Query: 77  FRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKES 136
           FRTLT SYYRGAQG+I+VYDVTRR+TF  L D W  E++ Y T  D +KMLVGNK+DKE+
Sbjct: 70  FRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVKMLVGNKIDKEN 129

Query: 137 ERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLADGSTGLKKNI 196
            R V + EG+ FAR++  LF+E SAKT   V+  F+ELV KI+ TP L    S      +
Sbjct: 130 -REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESESQNKGVKL 189

Query: 197 FKEKPPETTTSAGGCCS 213
             ++      + GG CS
Sbjct: 190 SNKEEGHGGGACGGYCS 204

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BLAST of CsGy6G019900 vs. NCBI nr
Match: XP_011657438.1 (ras-related protein RABC1 isoform X1 [Cucumis sativus] >KGN47732.1 hypothetical protein Csa_018233 [Cucumis sativus])

HSP 1 Score: 431 bits (1107), Expect = 3.28e-152
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPETTTSAGGCCSY 213
           PSLLADGSTGLKKNIFKEKPPETTTSAGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPETTTSAGGCCSY 213

[Close]

BLAST of CsGy6G019900 vs. NCBI nr
Match: XP_016900129.1 (PREDICTED: ras-related protein RABC1 isoform X1 [Cucumis melo] >KAA0059795.1 ras-related protein RABC1 isoform X1 [Cucumis melo var. makuwa] >TYK05840.1 ras-related protein RABC1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 429 bits (1104), Expect = 9.40e-152
Identity = 212/213 (99.53%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPETTTSAGGCCSY 213
           PSLLADGSTGLKKNIFKEKPPETTT+AGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPETTTTAGGCCSY 213

[Close]

BLAST of CsGy6G019900 vs. NCBI nr
Match: XP_038885351.1 (ras-related protein RABC1 [Benincasa hispida])

HSP 1 Score: 425 bits (1093), Expect = 4.47e-150
Identity = 211/213 (99.06%), Postives = 211/213 (99.06%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFARE GCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFARESGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPETTTSAGGCCSY 213
           PSLLADGSTGLKKNIFKEKPPETT SAGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPETTASAGGCCSY 213

[Close]

BLAST of CsGy6G019900 vs. NCBI nr
Match: AIS71927.1 (RAS-related protein RABC1 [Citrullus lanatus])

HSP 1 Score: 423 bits (1087), Expect = 3.81e-149
Identity = 211/214 (98.60%), Postives = 213/214 (99.53%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPET-TTSAGGCCSY 213
           PSLLADGSTGLKKNIFKEKPPET ++SAGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPETNSSSAGGCCSY 214

[Close]

BLAST of CsGy6G019900 vs. NCBI nr
Match: XP_022926286.1 (ras-related protein RABC1-like [Cucurbita moschata] >XP_022926287.1 ras-related protein RABC1-like [Cucurbita moschata] >XP_022981607.1 ras-related protein RABC1-like [Cucurbita maxima] >KAG7037274.1 Ras-related protein RABC1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 422 bits (1084), Expect = 1.05e-148
Identity = 208/213 (97.65%), Postives = 210/213 (98.59%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFE+LSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPETTTSAGGCCSY 213
           PSLLADGSTGLKKNIFKEKPP+   SAGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPQENASAGGCCSY 213

[Close]

BLAST of CsGy6G019900 vs. ExPASy TrEMBL
Match: A0A0A0KH59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G395140 PE=4 SV=1)

HSP 1 Score: 431 bits (1107), Expect = 1.59e-152
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPETTTSAGGCCSY 213
           PSLLADGSTGLKKNIFKEKPPETTTSAGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPETTTSAGGCCSY 213

[Close]

BLAST of CsGy6G019900 vs. ExPASy TrEMBL
Match: A0A5A7V1Q4 (Ras-related protein RABC1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4863G00120 PE=4 SV=1)

HSP 1 Score: 429 bits (1104), Expect = 4.55e-152
Identity = 212/213 (99.53%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPETTTSAGGCCSY 213
           PSLLADGSTGLKKNIFKEKPPETTT+AGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPETTTTAGGCCSY 213

[Close]

BLAST of CsGy6G019900 vs. ExPASy TrEMBL
Match: A0A1S4DVW9 (ras-related protein RABC1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488699 PE=4 SV=1)

HSP 1 Score: 429 bits (1104), Expect = 4.55e-152
Identity = 212/213 (99.53%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPETTTSAGGCCSY 213
           PSLLADGSTGLKKNIFKEKPPETTT+AGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPETTTTAGGCCSY 213

[Close]

BLAST of CsGy6G019900 vs. ExPASy TrEMBL
Match: A0A097BTY5 (RAS-related protein RABC1 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 423 bits (1087), Expect = 1.85e-149
Identity = 211/214 (98.60%), Postives = 213/214 (99.53%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPET-TTSAGGCCSY 213
           PSLLADGSTGLKKNIFKEKPPET ++SAGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPETNSSSAGGCCSY 214

[Close]

BLAST of CsGy6G019900 vs. ExPASy TrEMBL
Match: A0A6J1EEF0 (ras-related protein RABC1-like OS=Cucurbita moschata OX=3662 GN=LOC111433468 PE=4 SV=1)

HSP 1 Score: 422 bits (1084), Expect = 5.11e-149
Identity = 208/213 (97.65%), Postives = 210/213 (98.59%), Query Frame = 0


Query: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGG 60
           MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFE+LSPTIGVDFKIKHVTVGG
Sbjct: 1   MSSAPSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEELSPTIGVDFKIKHVTVGG 60

Query: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120
           KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ
Sbjct: 61  KKLKLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQ 120

Query: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180
           DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT
Sbjct: 121 DCIKMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDT 180

Query: 181 PSLLADGSTGLKKNIFKEKPPETTTSAGGCCSY 213
           PSLLADGSTGLKKNIFKEKPP+   SAGGCCSY
Sbjct: 181 PSLLADGSTGLKKNIFKEKPPQENASAGGCCSY 213

[Close]

BLAST of CsGy6G019900 vs. TAIR 10
Match: AT1G43890.1 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 369.0 bits (946), Expect = 2.6e-102
Identity = 179/208 (86.06%), Postives = 196/208 (94.23%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKL 65
           SS QPEFDYLFK+LLIGDSGVGKS+LLL FTS++F+DLSPTIGVDFK+K++T+G KKLKL
Sbjct: 4   SSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 125
           AIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRR+TFTNLSDIWAKEIDLYSTNQDCIKM
Sbjct: 64  AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVDKESER VSKKEGIDFAREYGCLFLECSAKTRVNVEQCF+ELVLKIL+TPSL A
Sbjct: 124 LVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLTA 183

Query: 186 DGSTGLKKNIFKEKPPETT-TSAGGCCS 213
           +GS+G KKNIFK+ P +TT TS+  CCS
Sbjct: 184 EGSSGGKKNIFKQNPAQTTSTSSSYCCS 211

[Close]

BLAST of CsGy6G019900 vs. TAIR 10
Match: AT1G43890.2 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 369.0 bits (946), Expect = 2.6e-102
Identity = 179/208 (86.06%), Postives = 196/208 (94.23%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKL 65
           SS QPEFDYLFK+LLIGDSGVGKS+LLL FTS++F+DLSPTIGVDFK+K++T+G KKLKL
Sbjct: 4   SSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 125
           AIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRR+TFTNLSDIWAKEIDLYSTNQDCIKM
Sbjct: 64  AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVDKESER VSKKEGIDFAREYGCLFLECSAKTRVNVEQCF+ELVLKIL+TPSL A
Sbjct: 124 LVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLTA 183

Query: 186 DGSTGLKKNIFKEKPPETT-TSAGGCCS 213
           +GS+G KKNIFK+ P +TT TS+  CCS
Sbjct: 184 EGSSGGKKNIFKQNPAQTTSTSSSYCCS 211

[Close]

BLAST of CsGy6G019900 vs. TAIR 10
Match: AT1G43890.3 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 369.0 bits (946), Expect = 2.6e-102
Identity = 179/208 (86.06%), Postives = 196/208 (94.23%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKL 65
           SS QPEFDYLFK+LLIGDSGVGKS+LLL FTS++F+DLSPTIGVDFK+K++T+G KKLKL
Sbjct: 4   SSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 125
           AIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRR+TFTNLSDIWAKEIDLYSTNQDCIKM
Sbjct: 64  AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVDKESER VSKKEGIDFAREYGCLFLECSAKTRVNVEQCF+ELVLKIL+TPSL A
Sbjct: 124 LVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLTA 183

Query: 186 DGSTGLKKNIFKEKPPETT-TSAGGCCS 213
           +GS+G KKNIFK+ P +TT TS+  CCS
Sbjct: 184 EGSSGGKKNIFKQNPAQTTSTSSSYCCS 211

[Close]

BLAST of CsGy6G019900 vs. TAIR 10
Match: AT5G03530.1 (RAB GTPase homolog C2A )

HSP 1 Score: 317.0 bits (811), Expect = 1.2e-86
Identity = 148/207 (71.50%), Postives = 176/207 (85.02%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKL 65
           SS Q  +D  FK+LLIGDSGVGKS+LL+ F S S EDL+PTIGVDFKIK +TVGGK+LKL
Sbjct: 4   SSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 125
            IWDTAGQERFRTLT SYYRGAQGII+VYDVTRRETFTNL D+W KEI+LYSTNQ+C++M
Sbjct: 64  TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVD+ESER VS++EGI  A+E  C+FLECSA+TR NVEQCF+EL LKI++ PSLL 
Sbjct: 124 LVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPSLLE 183

Query: 186 DGSTGLKKNIFKEKPPETTTSAGGCCS 213
           +GS+ +K+NI K+KP   T +  GCCS
Sbjct: 184 EGSSAVKRNILKQKPEHQTNTQSGCCS 210

[Close]

BLAST of CsGy6G019900 vs. TAIR 10
Match: AT3G09910.1 (RAB GTPase homolog C2B )

HSP 1 Score: 282.3 bits (721), Expect = 3.2e-76
Identity = 137/207 (66.18%), Postives = 165/207 (79.71%), Query Frame = 0


Query: 6   SSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKLKL 65
           SS Q  +D  FK+LLIGDSGVGKS+LLL F S S EDL+PTIGVDFKIK + V GK+LKL
Sbjct: 4   SSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKRLKL 63

Query: 66  AIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 125
            IWDTAGQE+FRTLT SY+RG+QGII+VYDVT+RETF NL+DIWAKEI+LYSTN DCIKM
Sbjct: 64  TIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKM 123

Query: 126 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSLLA 185
           LVGNKVD+ESER VS++EG+  A++  CLF ECSA+TR NV  CF+EL LKI++ PSLL 
Sbjct: 124 LVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPSLLE 183

Query: 186 DGSTGLKKNIFKEKPPETTTSAGGCCS 213
           +GS+ +K+       P+     G CCS
Sbjct: 184 EGSSSVKRK------PDYRAHQGRCCS 204

The following BLAST results are available for this feature:

BLAST of CsGy6G019900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23657	3.6e-101	86.06	Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1	[more]
O49841	1.6e-85	71.50	Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1	[more]
Q9SF92	4.4e-75	66.18	Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1	[more]
P36862	1.2e-59	63.13	GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1	[more]
Q5ZLG1	1.8e-55	56.35	Ras-related protein Rab-18 OS=Gallus gallus OX=9031 GN=RAB18 PE=2 SV=1	[more]

BLAST of CsGy6G019900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657438.1	3.28e-152	100.00	ras-related protein RABC1 isoform X1 [Cucumis sativus] >KGN47732.1 hypothetical ...	[more]
XP_016900129.1	9.40e-152	99.53	PREDICTED: ras-related protein RABC1 isoform X1 [Cucumis melo] >KAA0059795.1 ras...	[more]
XP_038885351.1	4.47e-150	99.06	ras-related protein RABC1 [Benincasa hispida]	[more]
AIS71927.1	3.81e-149	98.60	RAS-related protein RABC1 [Citrullus lanatus]	[more]
XP_022926286.1	1.05e-148	97.65	ras-related protein RABC1-like [Cucurbita moschata] >XP_022926287.1 ras-related ...	[more]

BLAST of CsGy6G019900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KH59	1.59e-152	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G395140 PE=4 SV=1	[more]
A0A5A7V1Q4	4.55e-152	99.53	Ras-related protein RABC1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S4DVW9	4.55e-152	99.53	ras-related protein RABC1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488699 PE=...	[more]
A0A097BTY5	1.85e-149	98.60	RAS-related protein RABC1 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A6J1EEF0	5.11e-149	97.65	ras-related protein RABC1-like OS=Cucurbita moschata OX=3662 GN=LOC111433468 PE=...	[more]

BLAST of CsGy6G019900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43890.1	2.6e-102	86.06	RAB GTPASE HOMOLOG B18	[more]
AT1G43890.2	2.6e-102	86.06	RAB GTPASE HOMOLOG B18	[more]
AT1G43890.3	2.6e-102	86.06	RAB GTPASE HOMOLOG B18	[more]
AT5G03530.1	1.2e-86	71.50	RAB GTPase homolog C2A	[more]
AT3G09910.1	3.2e-76	66.18	RAB GTPase homolog C2B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 155..177 score: 43.03 coord: 56..78 score: 52.5 coord: 120..133 score: 42.87 coord: 16..37 score: 55.22 coord: 38..54 score: 29.74
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..180 e-value: 2.8E-98 score: 342.5
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 4..181 e-value: 0.0098 score: -4.1
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 13..180 e-value: 2.6E-34 score: 130.0
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 21..213 e-value: 5.2E-6 score: 35.8
None	No IPR available	PANTHER	PTHR47977	LD21953P-RELATED	coord: 7..212
None	No IPR available	PANTHER	PTHR47977:SF46	BNAA05G18680D PROTEIN	coord: 7..212
None	No IPR available	PROSITE	PS51419	RAB	coord: 11..211 score: 33.044277
None	No IPR available	PROSITE	PS51420	RHO	coord: 9..178 score: 8.986029
None	No IPR available	CDD	cd01863	Rab18	coord: 16..177 e-value: 1.75694E-105 score: 298.841
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 18..180 e-value: 9.7E-14 score: 55.6
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 17..178 e-value: 8.1E-57 score: 191.3
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 8..213 score: 18.760326
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 14..173 e-value: 3.5E-30 score: 102.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 9..211 e-value: 9.9E-66 score: 222.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G019900.2	CsGy6G019900.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding