CsGy6G019867 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTGATTTGGACTATTTGAATAGCCTAAACTATAACAAGACATATTATGACTTCTTGGAGGAGCTTAAGAGAAAAGGCAGAAACAAAGAAGTTTGGAGTGGAAGAAAAATGTAATCCTTTCTATTGACATGAAAGTAGAGGAGTTGAAGTTAAATGTTCGCAACATGGCCTATCTAAAAGAAATCAACCTTTGTGGGCCAAAATGTCTTTTTTTTCTCTCTTTTTTTCTTTTCCAATCTTTATCAAGCCCTTGGTGGGGTTGGGTCAAAATTTACTAGCCAAGGGGCCAACTCCAAGACCTACTTTGCTACAAATCTTTCTTTTACTATACTATAAATGACCAACACCAAACGCACTTCAACCCTTCATTTTCTCTCCCCTTACCCTTATATTTTACTCTCAACTATCTTGCCTTCCAATCAAGCATGAATGTGTACAGAGATCCAAACTCCTGTTACTTCCATCCCAAAGAAAAAGTGGTGGGCGTCTGTGCTTTGTGCTTAAACGAGAAGCTTCTTATTTTGGCGTCCAGACGAGGCCGCTACCACCACTCTTCACCCCGAACCTGCCGGAAAACTCCCATCAACCTCTCCAAGATCTTTGCTTTTAGTTCTTTCATCAGTCGTCTCGAATTCCGGCATTGGAAGCCGGAAAACTCCGACGATGAAGCCTCCACCAGTCAAGAAGGTACTTCCTATTCAGCTTCAATATGCATTACAATCCTTTTTCAGCTGTCATATATAAATAAGTAGCATGAAGAAAACTACATTTTTTTCCCTAGTTTCAAATCTCATAATCATGAAGAAAATCAGTGTTCATAGGCATTTTCAGCTGTGTGATATAAAAAACTGCCCAAAAAGAAGAAATTATTAATGGGTTTGTGAGTGAGTGTGTGTGTATCTGTTTCTCTATCCATGACTATGGAATAGGAGCTATTCAGAGGAGGAGAGTTCAATTGGAAATGAGTGAAATGCAACCAAAAGACGAGAGAAGAAAAGGCGGTGGAATGGTAAATGAGTGGTTTGGCAGAAGGGGGCAGTGTCAGAAATACAGAAAGTACAAGAATAAAAAAGAAACAGAGTAAGTAAACGGTGGAGGAGACTGTTTAAGAACAGTTGGTAAAAGTTCAAGTTTGAATTGTTCGAAATTATTACAGAGAATCAGAGTAGACAGGTTCTGTAATCACAAAGATTAGGCAGAAACTAGACAGAATTTTGGGATAAAAACTCTGAAACAAAGTAGTGGGGAAGGGGCAAGGAAAAGAAAACAGAAGTTCACATCTGGACAACACTGACGAATATCTTTCATTTTTCTTTTCTCTCTTTCTTTTACTATTAGTTAATTGCATATTTATTTGAGAGATCAGTCTTTGGATTTAATTTTTTTTTTCTAATGGGGCCCACTAAAAAAATGATGTAGATTCGTTCATCTCAATCAACTTTGGGAAAAATGGAGTTGGGTCATGGGAAGAGAACAAGGTCTCAGAGGTTTCCCTGGAAAATTGCATCCTGTCATGGAATCACCACTTGACCAAAGACTCCAAGGAGACCAAGACTGTGATAGAACACAGCAAGACCCGTGCCTCGCTTAGGTGGCGGAAGCGGATTGGACACCTCTTCCAGCTCATCAGAAGGAAAAGGTCAAACAAAGGAACAGTCTGCCACGTGGAAGGAGTTAAGACAAGGAAAGGCTGGATAAGAGCTCTGACAAGGTCAAGAAACACTGAATAGACAAAAGAGAGAATATCTATGCGTGGACTGGAAATTCAAATGTGGTTTGTGTAAAGATTTGAGTCAAATCAACTACTCATATATATATATATATTTTTTTTCTCATTTGAGCTCTTGCAGGTTAAACAATTTATGAGTGTAAATGAACTATAATGTGCTTGAAATATATATCTCTTCTTTTTTTCTCTTATGTAGAATGCTCCAGTATCGAACACTGCAATTAAATTAAACAATTGAAGAAGAAATTTTCCCATTCGTGTGCACATAGTGGGAAACAATGGAGCAAGAGGGGCCCCGTAGCTACACTCCTCTAATTTGGCCTATAGTTGTCTTAGTGCTTCAAAATCTGAACCATAAAACAGTCGTTACATGCATATATAAATCTTTCAAACCATGATAATTGTATTAAAAAAAATTATATCTTTGGAATTATATGTACAACTAATCGAATGACTTGTTTATTGTATTGAATATGAATTAGGAGAGCAATGATACTTATGCCAAAAAAAATAGACTACCTATAAAGACAAACTAAATGAAG CTTGATTTGGACTATTTGAATAGCCTAAACTATAACAAGACATATTATGACTTCTTGGAGGAGCTTAAGAGAAAAGGCAGAAACAAAGAAGTTTGGAGTGGAAGAAAAATGTAATCCTTTCTATTGACATGAAAGTAGAGGAGTTGAAGTTAAATGTTCGCAACATGGCCTATCTAAAAGAAATCAACCTTTGTGGGCCAAAATGTCTTTTTTTTCTCTCTTTTTTTCTTTTCCAATCTTTATCAAGCCCTTGGTGGGGTTGGGTCAAAATTTACTAGCCAAGGGGCCAACTCCAAGACCTACTTTGCTACAAATCTTTCTTTTACTATACTATAAATGACCAACACCAAACGCACTTCAACCCTTCATTTTCTCTCCCCTTACCCTTATATTTTACTCTCAACTATCTTGCCTTCCAATCAAGCATGAATGTGTACAGAGATCCAAACTCCTGTTACTTCCATCCCAAAGAAAAAGTGGTGGGCGTCTGTGCTTTGTGCTTAAACGAGAAGCTTCTTATTTTGGCGTCCAGACGAGGCCGCTACCACCACTCTTCACCCCGAACCTGCCGGAAAACTCCCATCAACCTCTCCAAGATCTTTGCTTTTAGTTCTTTCATCAGTCGTCTCGAATTCCGGCATTGGAAGCCGGAAAACTCCGACGATGAAGCCTCCACCAGTCAAGAAGATTCGTTCATCTCAATCAACTTTGGGAAAAATGGAGTTGGGTCATGGGAAGAGAACAAGGTCTCAGAGGTTTCCCTGGAAAATTGCATCCTGTCATGGAATCACCACTTGACCAAAGACTCCAAGGAGACCAAGACTGTGATAGAACACAGCAAGACCCGTGCCTCGCTTAGGTGGCGGAAGCGGATTGGACACCTCTTCCAGCTCATCAGAAGGAAAAGGTCAAACAAAGGAACAGTCTGCCACGTGGAAGGAGTTAAGACAAGGAAAGGCTGGATAAGAGCTCTGACAAGGTCAAGAAACACTGAATAGACAAAAGAGAGAATATCTATGCGTGGACTGGAAATTCAAATGTGGTTTGTGTAAAGATTTGAGTCAAATCAACTACTCATATATATATATATATTTTTTTTCTCATTTGAGCTCTTGCAGGTTAAACAATTTATGAGTGTAAATGAACTATAATGTGCTTGAAATATATATCTCTTCTTTTTTTCTCTTATGTAGAATGCTCCAGTATCGAACACTGCAATTAAATTAAACAATTGAAGAAGAAATTTTCCCATTCGTGTGCACATAGTGGGAAACAATGGAGCAAGAGGGGCCCCGTAGCTACACTCCTCTAATTTGGCCTATAGTTGTCTTAGTGCTTCAAAATCTGAACCATAAAACAGTCGTTACATGCATATATAAATCTTTCAAACCATGATAATTGTATTAAAAAAAATTATATCTTTGGAATTATATGTACAACTAATCGAATGACTTGTTTATTGTATTGAATATGAATTAGGAGAGCAATGATACTTATGCCAAAAAAAATAGACTACCTATAAAGACAAACTAAATGAAG ATGAATGTGTACAGAGATCCAAACTCCTGTTACTTCCATCCCAAAGAAAAAGTGGTGGGCGTCTGTGCTTTGTGCTTAAACGAGAAGCTTCTTATTTTGGCGTCCAGACGAGGCCGCTACCACCACTCTTCACCCCGAACCTGCCGGAAAACTCCCATCAACCTCTCCAAGATCTTTGCTTTTAGTTCTTTCATCAGTCGTCTCGAATTCCGGCATTGGAAGCCGGAAAACTCCGACGATGAAGCCTCCACCAGTCAAGAAGATTCGTTCATCTCAATCAACTTTGGGAAAAATGGAGTTGGGTCATGGGAAGAGAACAAGGTCTCAGAGGTTTCCCTGGAAAATTGCATCCTGTCATGGAATCACCACTTGACCAAAGACTCCAAGGAGACCAAGACTGTGATAGAACACAGCAAGACCCGTGCCTCGCTTAGGTGGCGGAAGCGGATTGGACACCTCTTCCAGCTCATCAGAAGGAAAAGGTCAAACAAAGGAACAGTCTGCCACGTGGAAGGAGTTAAGACAAGGAAAGGCTGGATAAGAGCTCTGACAAGGTCAAGAAACACTGAATAG MNVYRDPNSCYFHPKEKVVGVCALCLNEKLLILASRRGRYHHSSPRTCRKTPINLSKIFAFSSFISRLEFRHWKPENSDDEASTSQEDSFISINFGKNGVGSWEENKVSEVSLENCILSWNHHLTKDSKETKTVIEHSKTRASLRWRKRIGHLFQLIRRKRSNKGTVCHVEGVKTRKGWIRALTRSRNTE* Homology
BLAST of CsGy6G019867 vs. NCBI nr
Match: XP_004150445.1 (uncharacterized protein LOC101207127 [Cucumis sativus] >KGN47729.1 hypothetical protein Csa_018229 [Cucumis sativus]) HSP 1 Score: 395 bits (1016), Expect = 4.23e-139 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0
BLAST of CsGy6G019867 vs. NCBI nr
Match: KAA0059884.1 (uncharacterized protein E6C27_scaffold108G001760 [Cucumis melo var. makuwa] >TYK24834.1 uncharacterized protein E5676_scaffold184G00930 [Cucumis melo var. makuwa]) HSP 1 Score: 389 bits (998), Expect = 2.35e-136 Identity = 186/190 (97.89%), Postives = 187/190 (98.42%), Query Frame = 0
BLAST of CsGy6G019867 vs. NCBI nr
Match: XP_008466708.1 (PREDICTED: uncharacterized protein LOC103504055 [Cucumis melo]) HSP 1 Score: 389 bits (998), Expect = 6.87e-136 Identity = 186/190 (97.89%), Postives = 187/190 (98.42%), Query Frame = 0
BLAST of CsGy6G019867 vs. NCBI nr
Match: XP_038884296.1 (uncharacterized protein LOC120075175 [Benincasa hispida]) HSP 1 Score: 370 bits (949), Expect = 6.74e-129 Identity = 180/190 (94.74%), Postives = 182/190 (95.79%), Query Frame = 0
BLAST of CsGy6G019867 vs. NCBI nr
Match: XP_022938530.1 (uncharacterized protein LOC111444738 [Cucurbita moschata] >KAG6578970.1 hypothetical protein SDJN03_23418, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 355 bits (911), Expect = 4.34e-123 Identity = 175/191 (91.62%), Postives = 180/191 (94.24%), Query Frame = 0
BLAST of CsGy6G019867 vs. ExPASy TrEMBL
Match: A0A0A0KFU9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G390120 PE=4 SV=1) HSP 1 Score: 395 bits (1016), Expect = 2.05e-139 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0
BLAST of CsGy6G019867 vs. ExPASy TrEMBL
Match: A0A5A7UXW7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00930 PE=4 SV=1) HSP 1 Score: 389 bits (998), Expect = 1.14e-136 Identity = 186/190 (97.89%), Postives = 187/190 (98.42%), Query Frame = 0
BLAST of CsGy6G019867 vs. ExPASy TrEMBL
Match: A0A1S3CRU8 (uncharacterized protein LOC103504055 OS=Cucumis melo OX=3656 GN=LOC103504055 PE=4 SV=1) HSP 1 Score: 389 bits (998), Expect = 3.32e-136 Identity = 186/190 (97.89%), Postives = 187/190 (98.42%), Query Frame = 0
BLAST of CsGy6G019867 vs. ExPASy TrEMBL
Match: A0A6J1FK19 (uncharacterized protein LOC111444738 OS=Cucurbita moschata OX=3662 GN=LOC111444738 PE=4 SV=1) HSP 1 Score: 355 bits (911), Expect = 2.10e-123 Identity = 175/191 (91.62%), Postives = 180/191 (94.24%), Query Frame = 0
BLAST of CsGy6G019867 vs. ExPASy TrEMBL
Match: A0A6J1CHY8 (uncharacterized protein LOC111011807 OS=Momordica charantia OX=3673 GN=LOC111011807 PE=4 SV=1) HSP 1 Score: 352 bits (902), Expect = 4.95e-122 Identity = 174/191 (91.10%), Postives = 181/191 (94.76%), Query Frame = 0
BLAST of CsGy6G019867 vs. TAIR 10
Match: AT1G21830.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44608.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 156.4 bits (394), Expect = 2.3e-38 Identity = 97/205 (47.32%), Postives = 130/205 (63.41%), Query Frame = 0
BLAST of CsGy6G019867 vs. TAIR 10
Match: AT1G44608.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21830.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 77.0 bits (188), Expect = 1.8e-14 Identity = 61/169 (36.09%), Postives = 84/169 (49.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|