CsGy6G019375 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G019375
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	At1g69050
Location	Gy14Chr6: 19793093 .. 19793491 (-)
RNA-Seq Expression	CsGy6G019375
Synteny	CsGy6G019375

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCAAAGGGATCCAAAGGCATCAAAGCTTGGGAATTAATGGAGGATTTTGGAGCAGACGCAGCTGAGTTTCCAGGCTTTCAAACCAATGTTGCGCATAGAGACGACATCGTTTACCGGAGGTCGTTGACTCGGTTGCAACGTTGTGCTCCCCACCCTCTCTCGTTGCCACGCCCTACCTCTTTTCCGTCGTGTGGTGGTGCATCGAAACAACCTCCTCCTCTGGTTGAAAACAACAACAATTGTTCTTCTTTTTCTTCAACATCAAATAATGCATCTTTTCATTGTATAGATCCGATCCCATTACTTTCACCCCTTGTATGTCCGTCATTGTTTGAGTCTCACTGTGTCATAGAAAAAAATGTTACTACAAAGTCTAGTCGAACCAACTTGTAA

mRNA sequence

ATGGAAGCAAAGGGATCCAAAGGCATCAAAGCTTGGGAATTAATGGAGGATTTTGGAGCAGACGCAGCTGAGTTTCCAGGCTTTCAAACCAATGTTGCGCATAGAGACGACATCGTTTACCGGAGGTCGTTGACTCGGTTGCAACGTTGTGCTCCCCACCCTCTCTCGTTGCCACGCCCTACCTCTTTTCCGTCGTGTGGTGGTGCATCGAAACAACCTCCTCCTCTGGTTGAAAACAACAACAATTGTTCTTCTTTTTCTTCAACATCAAATAATGCATCTTTTCATTGTATAGATCCGATCCCATTACTTTCACCCCTTGTATGTCCGTCATTGTTTGAGTCTCACTGTGTCATAGAAAAAAATGTTACTACAAAGTCTAGTCGAACCAACTTGTAA

Coding sequence (CDS)

ATGGAAGCAAAGGGATCCAAAGGCATCAAAGCTTGGGAATTAATGGAGGATTTTGGAGCAGACGCAGCTGAGTTTCCAGGCTTTCAAACCAATGTTGCGCATAGAGACGACATCGTTTACCGGAGGTCGTTGACTCGGTTGCAACGTTGTGCTCCCCACCCTCTCTCGTTGCCACGCCCTACCTCTTTTCCGTCGTGTGGTGGTGCATCGAAACAACCTCCTCCTCTGGTTGAAAACAACAACAATTGTTCTTCTTTTTCTTCAACATCAAATAATGCATCTTTTCATTGTATAGATCCGATCCCATTACTTTCACCCCTTGTATGTCCGTCATTGTTTGAGTCTCACTGTGTCATAGAAAAAAATGTTACTACAAAGTCTAGTCGAACCAACTTGTAA

Protein sequence

MEAKGSKGIKAWELMEDFGADAAEFPGFQTNVAHRDDIVYRRSLTRLQRCAPHPLSLPRPTSFPSCGGASKQPPPLVENNNNCSSFSSTSNNASFHCIDPIPLLSPLVCPSLFESHCVIEKNVTTKSSRTNL*

Homology

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BLAST of CsGy6G019375 vs. NCBI nr
Match: KAE8647257.1 (hypothetical protein Csa_018305, partial [Cucumis sativus])

HSP 1 Score: 270 bits (690), Expect = 2.57e-91
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MEAKGSKGIKAWELMEDFGADAAEFPGFQTNVAHRDDIVYRRSLTRLQRCAPHPLSLPRP 60
           MEAKGSKGIKAWELMEDFGADAAEFPGFQTNVAHRDDIVYRRSLTRLQRCAPHPLSLPRP
Sbjct: 1   MEAKGSKGIKAWELMEDFGADAAEFPGFQTNVAHRDDIVYRRSLTRLQRCAPHPLSLPRP 60

Query: 61  TSFPSCGGASKQPPPLVENNNNCSSFSSTSNNASFHCIDPIPLLSPLVCPSLFESHCVIE 120
           TSFPSCGGASKQPPPLVENNNNCSSFSSTSNNASFHCIDPIPLLSPLVCPSLFESHCVIE
Sbjct: 61  TSFPSCGGASKQPPPLVENNNNCSSFSSTSNNASFHCIDPIPLLSPLVCPSLFESHCVIE 120

Query: 121 KNVTTKSSRT 130
           KNVTTKSSRT
Sbjct: 121 KNVTTKSSRT 130

[Close]

BLAST of CsGy6G019375 vs. NCBI nr
Match: PON64471.1 (hypothetical protein TorRG33x02_273200 [Trema orientale])

HSP 1 Score: 95.1 bits (235), Expect = 2.52e-22
Identity = 54/106 (50.94%), Postives = 72/106 (67.92%), Query Frame = 0


Query: 19  GADAAEFPGFQTNVAHRDDIVYRRSLTRLQRCAPHPLSLPRPTSFPSCGGASKQPPPLVE 78
           G  A +FPGFQT  AH+DDIV +RSL+RLQR AP PL L +P  + SC G  K      +
Sbjct: 4   GCGADQFPGFQT-YAHKDDIVLKRSLSRLQRRAPCPLQL-KPKVYSSCHGGVKSQGSCSK 63

Query: 79  NNNNCSSFSSTSNNASFHCIDPIPLLSPLVCPSLFESHCVIEKNVT 124
           +++  S+ SS+S ++ +H  DPIPLLSPLV PSL ES C+ ++N T
Sbjct: 64  SSSPSSTSSSSSLSSFYHSKDPIPLLSPLVLPSLLESACIQQENAT 107

[Close]

BLAST of CsGy6G019375 vs. NCBI nr
Match: KAB1206573.1 (hypothetical protein CJ030_MR7G020458 [Morella rubra] >KAB1206574.1 hypothetical protein CJ030_MR7G020459 [Morella rubra])

HSP 1 Score: 93.2 bits (230), Expect = 1.29e-21
Identity = 57/104 (54.81%), Postives = 69/104 (66.35%), Query Frame = 0


Query: 22  AAEFPGFQTNVAHRDDIVYRRSLTRLQRCAPHPLSLPRPTSFPS-CGGASKQPPPLVENN 81
           +AEFPGFQT V H+DD VYR SL+RLQR AP PL L +P++ PS C G     PP     
Sbjct: 6   SAEFPGFQTCV-HKDDFVYRSSLSRLQRRAPSPLQLIKPSTVPSACNG-----PPKTFVG 65

Query: 82  NNCSSFSSTSNNASFHCIDPIPLLSPLVCPSLFESHCVIEKNVT 124
           ++ SS SS+S N  ++  DPIPLLSPL  PSL ES  V E N+T
Sbjct: 66  SSSSSSSSSSMNPFYYSKDPIPLLSPLALPSLLESAYVQEGNIT 103

[Close]

BLAST of CsGy6G019375 vs. NCBI nr
Match: KAF3956335.1 (hypothetical protein CMV_018528 [Castanea mollissima])

HSP 1 Score: 86.7 bits (213), Expect = 4.64e-19
Identity = 62/114 (54.39%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 15  MEDFGADAAEFPGFQTNVAHRDDIVYRRSLT-RLQRCAPHPLSLPRPTSFPSCGGASKQP 74
           MED    +AEFPGFQT V H+DD V+ RSL+ RLQR AP PL L +P    +C GA    
Sbjct: 1   MED---SSAEFPGFQTCV-HKDDFVFGRSLSCRLQRQAPCPLQL-KPRVPTACNGAQN-- 60

Query: 75  PPLVENNNNCSSFSSTSNNASFHCIDPIPLLSPLVCPSLFESHCVIEKNVTTKS 127
            P V  +N  SS SS+S N+ +H  +PIPLLSPLV PS  ES C+ E N TTKS
Sbjct: 61  -PFVSGSNPSSS-SSSSLNSFYHSKEPIPLLSPLVLPSFLESACIQEGN-TTKS 104

[Close]

BLAST of CsGy6G019375 vs. NCBI nr
Match: XP_042979927.1 (uncharacterized protein LOC122310107 [Carya illinoinensis] >KAG2706907.1 hypothetical protein I3760_05G123700 [Carya illinoinensis] >KAG6654100.1 hypothetical protein CIPAW_05G122300 [Carya illinoinensis] >KAG6712790.1 hypothetical protein I3842_05G119400 [Carya illinoinensis])

HSP 1 Score: 85.9 bits (211), Expect = 9.83e-19
Identity = 58/109 (53.21%), Postives = 73/109 (66.97%), Query Frame = 0


Query: 20  ADAAEFPGFQTNVAHRDDIVYRRSLTRLQRCAPHPLSLPRPTSFPSCGGASKQPPPLVEN 79
           +  AEFPGFQT   H+DD V+ RSL+RLQR AP PL L +P    +C GA+ +    V  
Sbjct: 4   SSTAEFPGFQT--FHKDDFVFGRSLSRLQRRAPSPLQL-KPKVPSACNGAAAKS--FVGT 63

Query: 80  NNNCSSFSSTSN-NASFHCIDPIPLLSPLVCPSLFESHCVIEKNVTTKS 127
           +N+ SS SS+S+ N+ ++  DPIPLLSPLV PSL ES  V E N TTKS
Sbjct: 64  SNSSSSSSSSSSLNSFYYSKDPIPLLSPLVSPSLLESAYVQEGN-TTKS 106

[Close]

BLAST of CsGy6G019375 vs. ExPASy TrEMBL
Match: A0A0A0KDQ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G367140 PE=4 SV=1)

HSP 1 Score: 274 bits (700), Expect = 3.96e-93
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MEAKGSKGIKAWELMEDFGADAAEFPGFQTNVAHRDDIVYRRSLTRLQRCAPHPLSLPRP 60
           MEAKGSKGIKAWELMEDFGADAAEFPGFQTNVAHRDDIVYRRSLTRLQRCAPHPLSLPRP
Sbjct: 1   MEAKGSKGIKAWELMEDFGADAAEFPGFQTNVAHRDDIVYRRSLTRLQRCAPHPLSLPRP 60

Query: 61  TSFPSCGGASKQPPPLVENNNNCSSFSSTSNNASFHCIDPIPLLSPLVCPSLFESHCVIE 120
           TSFPSCGGASKQPPPLVENNNNCSSFSSTSNNASFHCIDPIPLLSPLVCPSLFESHCVIE
Sbjct: 61  TSFPSCGGASKQPPPLVENNNNCSSFSSTSNNASFHCIDPIPLLSPLVCPSLFESHCVIE 120

Query: 121 KNVTTKSSRTNL 132
           KNVTTKSSRTNL
Sbjct: 121 KNVTTKSSRTNL 132

[Close]

BLAST of CsGy6G019375 vs. ExPASy TrEMBL
Match: A0A2P5CTY4 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_273200 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.22e-22
Identity = 54/106 (50.94%), Postives = 72/106 (67.92%), Query Frame = 0


Query: 19  GADAAEFPGFQTNVAHRDDIVYRRSLTRLQRCAPHPLSLPRPTSFPSCGGASKQPPPLVE 78
           G  A +FPGFQT  AH+DDIV +RSL+RLQR AP PL L +P  + SC G  K      +
Sbjct: 4   GCGADQFPGFQT-YAHKDDIVLKRSLSRLQRRAPCPLQL-KPKVYSSCHGGVKSQGSCSK 63

Query: 79  NNNNCSSFSSTSNNASFHCIDPIPLLSPLVCPSLFESHCVIEKNVT 124
           +++  S+ SS+S ++ +H  DPIPLLSPLV PSL ES C+ ++N T
Sbjct: 64  SSSPSSTSSSSSLSSFYHSKDPIPLLSPLVLPSLLESACIQQENAT 107

[Close]

BLAST of CsGy6G019375 vs. ExPASy TrEMBL
Match: A0A6A1V1J8 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR7G020458 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 6.22e-22
Identity = 57/104 (54.81%), Postives = 69/104 (66.35%), Query Frame = 0


Query: 22  AAEFPGFQTNVAHRDDIVYRRSLTRLQRCAPHPLSLPRPTSFPS-CGGASKQPPPLVENN 81
           +AEFPGFQT V H+DD VYR SL+RLQR AP PL L +P++ PS C G     PP     
Sbjct: 6   SAEFPGFQTCV-HKDDFVYRSSLSRLQRRAPSPLQLIKPSTVPSACNG-----PPKTFVG 65

Query: 82  NNCSSFSSTSNNASFHCIDPIPLLSPLVCPSLFESHCVIEKNVT 124
           ++ SS SS+S N  ++  DPIPLLSPL  PSL ES  V E N+T
Sbjct: 66  SSSSSSSSSSMNPFYYSKDPIPLLSPLALPSLLESAYVQEGNIT 103

[Close]

BLAST of CsGy6G019375 vs. ExPASy TrEMBL
Match: A0A6P4AEF0 (uncharacterized protein LOC107429071 OS=Ziziphus jujuba OX=326968 GN=LOC107429071 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.60e-19
Identity = 57/113 (50.44%), Postives = 75/113 (66.37%), Query Frame = 0


Query: 15  MEDFGADAAEFPGFQTNVAHRDDIVYRRSLT-RLQRCAPHPLSLPRPT-SFPSCGGASKQ 74
           ME+ G +  +FPGFQT  AH+DDIV+RR L+ RLQR AP PL + +P  S  S  G  K 
Sbjct: 1   MEENGGE--QFPGFQT-CAHKDDIVFRRCLSHRLQRRAPCPLQVMKPNVSSASFHGGQKS 60

Query: 75  PPPLVENNNNCSSFSSTSN-NASFHCIDPIPLLSPLVCPSLFESHCVIEKNVT 124
                 N+++ SS SS+S+ N+ +H  DPIPLLSPLV PSL ES C+ ++N T
Sbjct: 61  LGTSGTNSSSSSSSSSSSSLNSFYHSKDPIPLLSPLVLPSLLESACIQQENAT 110

[Close]

BLAST of CsGy6G019375 vs. ExPASy TrEMBL
Match: A0A2I4H8F7 (uncharacterized protein LOC109014412 OS=Juglans regia OX=51240 GN=LOC109014412 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.91e-18
Identity = 58/109 (53.21%), Postives = 72/109 (66.06%), Query Frame = 0


Query: 20  ADAAEFPGFQTNVAHRDDIVYRRSLTRLQRCAPHPLSLPRPTSFPSCGGASKQPPPLVEN 79
           +  AEFPGFQT   H+DD V+ RSL+RLQR AP PL L +P    +C GA+ +    V  
Sbjct: 4   SSTAEFPGFQT--FHKDDFVFGRSLSRLQRRAPSPLQL-KPKVPSACNGAAAKS--FVGT 63

Query: 80  NNNCSSFSSTSNNASFHCI-DPIPLLSPLVCPSLFESHCVIEKNVTTKS 127
           +N+ SS SS+S N+ ++   DPIPLLSPLV PSL ES  V E N TTKS
Sbjct: 64  SNSSSSTSSSSLNSFYYSNKDPIPLLSPLVLPSLLESAYVQEGN-TTKS 106

[Close]

BLAST of CsGy6G019375 vs. TAIR 10
Match: AT1G69050.1 (unknown protein; Has 9 Blast hits to 9 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 8.4e-11
Identity = 50/117 (42.74%), Postives = 61/117 (52.14%), Query Frame = 0


Query: 15  MEDFGADAAEFPGFQTNVAHRDDIVYRRSLT-RLQRCAPHPLSLPRPTSFPSCGGASKQP 74
           MED G     FPGF+  V H DD V+RRSL+ RLQR AP PL LP             +P
Sbjct: 1   MEDSGRKGDPFPGFEMRV-HNDDCVFRRSLSCRLQRRAPCPLLLP------------PRP 60

Query: 75  PPLVENNNNCSSFSSTSNNASFHC---IDPIPLLSPLVCPSLFESHCVIEKNVTTKS 128
           PP  E     +  ++T  + S  C    DPIPLLSPLV PS+      ++ N TT S
Sbjct: 61  PPSAE-----APSTTTGVSTSTFCQNGTDPIPLLSPLVLPSM------LQPNPTTTS 93

The following BLAST results are available for this feature:

BLAST of CsGy6G019375 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G019375 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647257.1	2.57e-91	100.00	hypothetical protein Csa_018305, partial [Cucumis sativus]	[more]
PON64471.1	2.52e-22	50.94	hypothetical protein TorRG33x02_273200 [Trema orientale]	[more]
KAB1206573.1	1.29e-21	54.81	hypothetical protein CJ030_MR7G020458 [Morella rubra] >KAB1206574.1 hypothetical...	[more]
KAF3956335.1	4.64e-19	54.39	hypothetical protein CMV_018528 [Castanea mollissima]	[more]
XP_042979927.1	9.83e-19	53.21	uncharacterized protein LOC122310107 [Carya illinoinensis] >KAG2706907.1 hypothe...	[more]

BLAST of CsGy6G019375 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDQ2	3.96e-93	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G367140 PE=4 SV=1	[more]
A0A2P5CTY4	1.22e-22	50.94	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_273200 PE=4 SV...	[more]
A0A6A1V1J8	6.22e-22	54.81	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR7G020458 PE=4 SV=1	[more]
A0A6P4AEF0	5.60e-19	50.44	uncharacterized protein LOC107429071 OS=Ziziphus jujuba OX=326968 GN=LOC10742907...	[more]
A0A2I4H8F7	1.91e-18	53.21	uncharacterized protein LOC109014412 OS=Juglans regia OX=51240 GN=LOC109014412 P...	[more]

BLAST of CsGy6G019375 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69050.1	8.4e-11	42.74	unknown protein; Has 9 Blast hits to 9 proteins in 4 species: Archae - 0; Bacter...	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G019375.1	CsGy6G019375.1	mRNA