CsGy6G019365 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G019365
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr6: 19787934 .. 19788155 (+)
RNA-Seq ExpressionCsGy6G019365
SyntenyCsGy6G019365
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAAGGCAGAAATGGGGGAATATGTGGTTGGGCGATGCGCATACCTGAAACGGAGAAGATGTAAAGAGAGAGCTGCCGACGACAGAGATAAGAAGTGGCAGTTGGCGGTGGTTTTGGCGACGGAGAAATTCAATCTCATATATTCCTTCAGTGGGCTCCGGTGGCGGTGGGTGAGAGAATCATTGAATCATTCGTGGATCGTGTTCCGAAAGTTTTGA

mRNA sequence

ATGGGCAAGGCAGAAATGGGGGAATATGTGGTTGGGCGATGCGCATACCTGAAACGGAGAAGATGTAAAGAGAGAGCTGCCGACGACAGAGATAAGAAGTGGCAGTTGGCGGTGGTTTTGGCGACGGAGAAATTCAATCTCATATATTCCTTCAGTGGGCTCCGGTGGCGGTGGGTGAGAGAATCATTGAATCATTCGTGGATCGTGTTCCGAAAGTTTTGA

Coding sequence (CDS)

ATGGGCAAGGCAGAAATGGGGGAATATGTGGTTGGGCGATGCGCATACCTGAAACGGAGAAGATGTAAAGAGAGAGCTGCCGACGACAGAGATAAGAAGTGGCAGTTGGCGGTGGTTTTGGCGACGGAGAAATTCAATCTCATATATTCCTTCAGTGGGCTCCGGTGGCGGTGGGTGAGAGAATCATTGAATCATTCGTGGATCGTGTTCCGAAAGTTTTGA

Protein sequence

MGKAEMGEYVVGRCAYLKRRRCKERAADDRDKKWQLAVVLATEKFNLIYSFSGLRWRWVRESLNHSWIVFRKF*
Homology
[Close]
BLAST of CsGy6G019365 vs. NCBI nr
Match: KGN47667.1 (hypothetical protein Csa_018289 [Cucumis sativus])

HSP 1 Score: 155 bits (393), Expect = 7.60e-48
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MGKAEMGEYVVGRCAYLKRRRCKERAADDRDKKWQLAVVLATEKFNLIYSFSGLRWRWVR 60
          MGKAEMGEYVVGRCAYLKRRRCKERAADDRDKKWQLAVVLATEKFNLIYSFSGLRWRWVR
Sbjct: 1  MGKAEMGEYVVGRCAYLKRRRCKERAADDRDKKWQLAVVLATEKFNLIYSFSGLRWRWVR 60

Query: 61 ESLNHSWIVFRKF 73
          ESLNHSWIVFRKF
Sbjct: 61 ESLNHSWIVFRKF 73

[Close]
BLAST of CsGy6G019365 vs. NCBI nr
Match: KAA0064779.1 (hypothetical protein E6C27_scaffold82G00860 [Cucumis melo var. makuwa])

HSP 1 Score: 117 bits (293), Expect = 1.28e-32
Identity = 58/70 (82.86%), Postives = 60/70 (85.71%), Query Frame = 0 

Query: 1  MGKAEMGEYVVGRCAYLKRRRCKERAADDRDKKWQLAVVLATEKFNLIYSFSGLRWRWVR 60
          MGKA MG+YVVGRCA LKRRR +ERAA D DKKWQ AVV ATEKFNLI S SGLRWRWV 
Sbjct: 1  MGKAGMGKYVVGRCANLKRRRWRERAAVDGDKKWQSAVVSATEKFNLINSLSGLRWRWVG 60

Query: 61 ESLNHSWIVF 70
          ESLNHSWIVF
Sbjct: 61 ESLNHSWIVF 70

[Close]
BLAST of CsGy6G019365 vs. ExPASy TrEMBL
Match: A0A0A0KGZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G367130 PE=4 SV=1)

HSP 1 Score: 155 bits (393), Expect = 3.68e-48
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MGKAEMGEYVVGRCAYLKRRRCKERAADDRDKKWQLAVVLATEKFNLIYSFSGLRWRWVR 60
          MGKAEMGEYVVGRCAYLKRRRCKERAADDRDKKWQLAVVLATEKFNLIYSFSGLRWRWVR
Sbjct: 1  MGKAEMGEYVVGRCAYLKRRRCKERAADDRDKKWQLAVVLATEKFNLIYSFSGLRWRWVR 60

Query: 61 ESLNHSWIVFRKF 73
          ESLNHSWIVFRKF
Sbjct: 61 ESLNHSWIVFRKF 73

[Close]
BLAST of CsGy6G019365 vs. ExPASy TrEMBL
Match: A0A5A7VH33 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00860 PE=4 SV=1)

HSP 1 Score: 117 bits (293), Expect = 6.19e-33
Identity = 58/70 (82.86%), Postives = 60/70 (85.71%), Query Frame = 0 

Query: 1  MGKAEMGEYVVGRCAYLKRRRCKERAADDRDKKWQLAVVLATEKFNLIYSFSGLRWRWVR 60
          MGKA MG+YVVGRCA LKRRR +ERAA D DKKWQ AVV ATEKFNLI S SGLRWRWV 
Sbjct: 1  MGKAGMGKYVVGRCANLKRRRWRERAAVDGDKKWQSAVVSATEKFNLINSLSGLRWRWVG 60

Query: 61 ESLNHSWIVF 70
          ESLNHSWIVF
Sbjct: 61 ESLNHSWIVF 70

The following BLAST results are available for this feature:
BLAST of CsGy6G019365 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G019365 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47667.17.60e-48100.00hypothetical protein Csa_018289 [Cucumis sativus][more]
KAA0064779.11.28e-3282.86hypothetical protein E6C27_scaffold82G00860 [Cucumis melo var. makuwa][more]
BLAST of CsGy6G019365 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGZ23.68e-48100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G367130 PE=4 SV=1[more]
A0A5A7VH336.19e-3382.86Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of CsGy6G019365 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G019365.1CsGy6G019365.1mRNA