CsGy6G018740 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G018740
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Protein of unknown function (DUF3511)
Location	Gy14Chr6: 19421086 .. 19421606 (+)
RNA-Seq Expression	CsGy6G018740
Synteny	CsGy6G018740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGATGATAGGAGAAGCTCTTATGGAGGAAGCTCATCCATGGAGATAGAGAAATATTATGGGCCATCGTCAAAGAGCCAAGTTTCTGTGAAGAAAGGGAAAAGCACTTCTGGGTCATCTTCAAAATCATGGAGATTTGTTGCTGATCCTGAGTTTCAAAGAAAGAAGAGAGTAGCAAGTTACAAGATGTATTCTGTTGAAGGCAAAATGAAAGGATCTTTTAGAAAAAGCTTCAGATGGCTTAAGGATAAGTACACCCAAATGCTATATGGCTGGTGGTGAGTTCTTTAAGTCTATTTGTGTTAAGTTCTTGATTGTTGTTGCTGTTCTTCTTCTTTTCATCTGTTTGTTTTGGAGTTTTTGATATATTGTTGAAATGTAAACAAGTCAATCAGTCAAACTATGGAAATAAAATCTTCTTTTTTTTCAAGTCTTTCTTTTTCTGTGATTGTTACATTTGGAATATGTTGATTGGTGAGTTGTGTTTTTCATTTTATTATTTGAATAGGTCAGTATAG

mRNA sequence

ATGGATGATGATAGGAGAAGCTCTTATGGAGGAAGCTCATCCATGGAGATAGAGAAATATTATGGGCCATCGTCAAAGAGCCAAGTTTCTGTGAAGAAAGGGAAAAGCACTTCTGGGTCATCTTCAAAATCATGGAGATTTGTTGCTGATCCTGAGTTTCAAAGAAAGAAGAGAGTAGCAAGTTACAAGATGTATTCTGTTGAAGGCAAAATGAAAGGATCTTTTAGAAAAAGCTTCAGATGGCTTAAGGATAAGTACACCCAAATGCTATATGGCTGGTGGTCAGTATAG

Coding sequence (CDS)

ATGGATGATGATAGGAGAAGCTCTTATGGAGGAAGCTCATCCATGGAGATAGAGAAATATTATGGGCCATCGTCAAAGAGCCAAGTTTCTGTGAAGAAAGGGAAAAGCACTTCTGGGTCATCTTCAAAATCATGGAGATTTGTTGCTGATCCTGAGTTTCAAAGAAAGAAGAGAGTAGCAAGTTACAAGATGTATTCTGTTGAAGGCAAAATGAAAGGATCTTTTAGAAAAAGCTTCAGATGGCTTAAGGATAAGTACACCCAAATGCTATATGGCTGGTGGTCAGTATAG

Protein sequence

MDDDRRSSYGGSSSMEIEKYYGPSSKSQVSVKKGKSTSGSSSKSWRFVADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWWSV*

Homology

[Close]

BLAST of CsGy6G018740 vs. NCBI nr
Match: KAA0064729.1 (hypothetical protein E6C27_scaffold82G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 186 bits (471), Expect = 4.65e-59
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 1  MDDDRRSSYGGSSSMEIEKYYGPSSKSQVSVKKGKSTSGSSSKSWRFVADPEFQRKKRVA 60
          MDDDRRSSYGGSSSMEIEKYYGPSSKSQVSVKKGKSTSGSSSKSWRFVADPEFQRKKRVA
Sbjct: 1  MDDDRRSSYGGSSSMEIEKYYGPSSKSQVSVKKGKSTSGSSSKSWRFVADPEFQRKKRVA 60

Query: 61 SYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW 94
          SYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW
Sbjct: 61 SYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW 94

[Close]

BLAST of CsGy6G018740 vs. NCBI nr
Match: XP_038884184.1 (uncharacterized protein LOC120075092 [Benincasa hispida])

HSP 1 Score: 158 bits (400), Expect = 2.97e-48
Identity = 84/94 (89.36%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 1  MDDDRRSSYGGSSSMEIEKYYGPSSKSQVSVKKGKSTSGSSSKSWRFVADPEFQRKKRVA 60
          MDDDRRS YG SS MEI+KYYGP  K Q SVKKGKS SGSSSKSWRFVADPEFQRKKRVA
Sbjct: 1  MDDDRRSYYGNSS-MEIQKYYGPP-KIQESVKKGKSISGSSSKSWRFVADPEFQRKKRVA 60

Query: 61 SYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW 94
          SYKMYSVEGKMKGSFRKSF+WLKDKYTQMLYGWW
Sbjct: 61 SYKMYSVEGKMKGSFRKSFKWLKDKYTQMLYGWW 92

[Close]

BLAST of CsGy6G018740 vs. NCBI nr
Match: KAG7029545.1 (hypothetical protein SDJN02_07884, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 143 bits (360), Expect = 3.63e-42
Identity = 78/94 (82.98%), Postives = 84/94 (89.36%), Query Frame = 0


Query: 1  MDDDRRSSYGGSSSMEIEKYYGPSSKSQVSVKKGKSTSGSSSKSWRFVADPEFQRKKRVA 60
          MDDDRR SYG SSSM+IE YYGP  KSQ+  KK K +SGSSSKS++F +DPEFQRKKRVA
Sbjct: 1  MDDDRRGSYG-SSSMQIESYYGPP-KSQIPGKKDKRSSGSSSKSFKF-SDPEFQRKKRVA 60

Query: 61 SYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW 94
          SYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW
Sbjct: 61 SYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW 91

[Close]

BLAST of CsGy6G018740 vs. NCBI nr
Match: KAG6598609.1 (hypothetical protein SDJN03_08387, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 135 bits (339), Expect = 5.25e-35
Identity = 74/90 (82.22%), Postives = 80/90 (88.89%), Query Frame = 0


Query: 5   RRSSYGGSSSMEIEKYYGPSSKSQVSVKKGKSTSGSSSKSWRFVADPEFQRKKRVASYKM 64
           RR SYG SSSM+IE YYGP  KSQ+  KK K +SGSSSKS++F +DPEFQRKKRVASYKM
Sbjct: 406 RRGSYG-SSSMQIESYYGPP-KSQIPGKKDKRSSGSSSKSFKF-SDPEFQRKKRVASYKM 465

Query: 65  YSVEGKMKGSFRKSFRWLKDKYTQMLYGWW 94
           YSVEGKMKGSFRKSFRWLKDKYTQMLYGWW
Sbjct: 466 YSVEGKMKGSFRKSFRWLKDKYTQMLYGWW 492

[Close]

BLAST of CsGy6G018740 vs. NCBI nr
Match: PON95996.1 (hypothetical protein TorRG33x02_082440 [Trema orientale])

HSP 1 Score: 124 bits (312), Expect = 1.73e-34
Identity = 71/119 (59.66%), Postives = 80/119 (67.23%), Query Frame = 0


Query: 1   MDDDRRSSYGGSSSMEIEKYYGPSSKSQVS-----------------------VKKGKST 60
           M+D  RS   GS  M+++ YYGP S++  +                       +KKGKS 
Sbjct: 1   MEDYTRSRSYGSGMMQMDHYYGPPSRAPAATSHDLRSYSASYAQTQMGNRDLRLKKGKSA 60

Query: 61  SGSSS--KSWRFVADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW 94
           SGSSS  KSW FV DPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQ+LYGWW
Sbjct: 61  SGSSSSSKSWSFVGDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQVLYGWW 119

[Close]

BLAST of CsGy6G018740 vs. ExPASy TrEMBL
Match: A0A5A7VGY1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00330 PE=4 SV=1)

HSP 1 Score: 186 bits (471), Expect = 2.25e-59
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 1  MDDDRRSSYGGSSSMEIEKYYGPSSKSQVSVKKGKSTSGSSSKSWRFVADPEFQRKKRVA 60
          MDDDRRSSYGGSSSMEIEKYYGPSSKSQVSVKKGKSTSGSSSKSWRFVADPEFQRKKRVA
Sbjct: 1  MDDDRRSSYGGSSSMEIEKYYGPSSKSQVSVKKGKSTSGSSSKSWRFVADPEFQRKKRVA 60

Query: 61 SYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW 94
          SYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW
Sbjct: 61 SYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW 94

[Close]

BLAST of CsGy6G018740 vs. ExPASy TrEMBL
Match: A0A0A0KFK3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G364115 PE=4 SV=1)

HSP 1 Score: 160 bits (406), Expect = 1.22e-49
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 15 MEIEKYYGPSSKSQVSVKKGKSTSGSSSKSWRFVADPEFQRKKRVASYKMYSVEGKMKGS 74
          MEIEKYYGPSSKSQVSVKKGKSTSGSSSKSWRFVADPEFQRKKRVASYKMYSVEGKMKGS
Sbjct: 1  MEIEKYYGPSSKSQVSVKKGKSTSGSSSKSWRFVADPEFQRKKRVASYKMYSVEGKMKGS 60

Query: 75 FRKSFRWLKDKYTQMLYGWW 94
          FRKSFRWLKDKYTQMLYGWW
Sbjct: 61 FRKSFRWLKDKYTQMLYGWW 80

[Close]

BLAST of CsGy6G018740 vs. ExPASy TrEMBL
Match: A0A2P5FE02 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_082440 PE=4 SV=1)

HSP 1 Score: 124 bits (312), Expect = 8.37e-35
Identity = 71/119 (59.66%), Postives = 80/119 (67.23%), Query Frame = 0


Query: 1   MDDDRRSSYGGSSSMEIEKYYGPSSKSQVS-----------------------VKKGKST 60
           M+D  RS   GS  M+++ YYGP S++  +                       +KKGKS 
Sbjct: 1   MEDYTRSRSYGSGMMQMDHYYGPPSRAPAATSHDLRSYSASYAQTQMGNRDLRLKKGKSA 60

Query: 61  SGSSS--KSWRFVADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW 94
           SGSSS  KSW FV DPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQ+LYGWW
Sbjct: 61  SGSSSSSKSWSFVGDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQVLYGWW 119

[Close]

BLAST of CsGy6G018740 vs. ExPASy TrEMBL
Match: A0A2P5DEK8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_071680 PE=4 SV=1)

HSP 1 Score: 120 bits (300), Expect = 5.60e-33
Identity = 68/119 (57.14%), Postives = 78/119 (65.55%), Query Frame = 0


Query: 1   MDDDRRSSYGGSSSMEIEKYYGPSSKSQVS-----------------------VKKGK-- 60
           M+D  RS   GS  M+++ YYGP S++  +                       +KKGK  
Sbjct: 1   MEDYTRSKSYGSGMMQMDHYYGPPSRAPAATSLDLRSYSASYAQTQMGNRDLRLKKGKGA 60

Query: 61  STSGSSSKSWRFVADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW 94
           S S S+SKSW FV DPEFQRKKRVASYKMYSVEGKMKGSFRKSFRW KDKYTQ+LYGWW
Sbjct: 61  SASSSASKSWSFVGDPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWFKDKYTQVLYGWW 119

[Close]

BLAST of CsGy6G018740 vs. ExPASy TrEMBL
Match: A0A6P3ZT47 (uncharacterized protein LOC107420071 OS=Ziziphus jujuba OX=326968 GN=LOC107420071 PE=4 SV=1)

HSP 1 Score: 117 bits (293), Expect = 6.50e-32
Identity = 57/66 (86.36%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 29  VSVKKGKSTSGSSSKSWRFVADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQ 88
           +  KKGKSTSGSSS+SW F  DPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQ
Sbjct: 55  IKFKKGKSTSGSSSRSWNFT-DPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQ 114

Query: 89  MLYGWW 94
           ++YGWW
Sbjct: 115 VVYGWW 119

[Close]

BLAST of CsGy6G018740 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 91.7 bits (226), Expect = 3.6e-19
Identity = 55/108 (50.93%), Postives = 65/108 (60.19%), Query Frame = 0


Query: 1   MDDDRRSSYGGSSSMEIEKY--------------YGPSSKSQVSVKKGKSTSGSSSKSWR 60
           M+D  R    G   M+I+ Y              YG    +   VKK KS   + SKSW 
Sbjct: 1   MEDFGRQRPYGDGGMQIQPYHGNQGGDFRSYSASYGTRENNIYDVKKEKSI--ARSKSWG 60

Query: 61  FVADPEFQRKKRVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYGWW 95
            + DPE QRKKRVASYKMY VEGK+KGSFR SFRWLK +YTQ++YGWW
Sbjct: 61  -ITDPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVVYGWW 105

[Close]

BLAST of CsGy6G018740 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 73.6 bits (179), Expect = 1.0e-13
Identity = 44/93 (47.31%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 4   DRRSSYGGSSSMEIEKY------YGPSSKSQVSVKKGKSTSGSSSKSWRFVADPEFQRKK 63
           D   S+ G+   ++  Y      Y        + KKG+S   SSS SW FV DP+ QRKK
Sbjct: 27  DGPDSFSGNGMQDLRSYSTSYTDYPTRIPEDQNPKKGRS---SSSSSWGFV-DPDLQRKK 86

Query: 64  RVASYKMYSVEGKMKGSFRKSFRWLKDKYTQML 91
           RV SY+ Y+VEGK+KGSFRKSF+W+KDK  ++L
Sbjct: 87  RVVSYRAYTVEGKLKGSFRKSFKWIKDKCNKLL 115

[Close]

BLAST of CsGy6G018740 vs. TAIR 10
Match: AT3G13910.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 65.5 bits (158), Expect = 2.7e-11
Identity = 41/87 (47.13%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 4  DRRSSYGGSSSMEIEKYYGPSSKS---QVSVKKGKSTSG---SSSKSWRFVADPEFQRKK 63
          +RR +  G +S   +   G  S++   Q+ +KK KS      ++S+SW F +DPE +RK+
Sbjct: 12 NRRDAVKGYNSGSFDDSAGDQSQTNDYQLKIKKSKSVPNADRAASRSWSF-SDPESRRKR 71

Query: 64 RVASYKMYSVEGKMKGSFRKSFRWLKD 85
          RVA YK+YSVE KMKGS RKSF+W KD
Sbjct: 72 RVAGYKVYSVEQKMKGSIRKSFKWFKD 97

[Close]

BLAST of CsGy6G018740 vs. TAIR 10
Match: AT1G72720.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 61.6 bits (148), Expect = 4.0e-10
Identity = 32/82 (39.02%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 13  SSMEIEKYYGPSSKSQVSVKKGKSTSGSSSKSWRFVADPEFQRKKRVASYKMYSVEGKMK 72
           S+     Y  P+     S  K K ++    K ++ + + E QRKKRVASY +Y VEG++K
Sbjct: 46  STSTYNAYQNPTIVRDDSNNKSKRSNKVKKKGFKGLCEAEIQRKKRVASYNVYGVEGRVK 105

Query: 73  GSFRKSFRWLKDKYTQMLYGWW 95
           GS +KSF+W K+  +  +YG W
Sbjct: 106 GSMKKSFKWFKETCSNAVYGLW 127

[Close]

BLAST of CsGy6G018740 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 55.5 bits (132), Expect = 2.8e-08
Identity = 32/95 (33.68%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 1   MDDDRRSSYGGSSSMEIEKYYGPSSKSQVSVKK---GKSTSGSSSKSWRFVADPEFQRKK 60
           MD      YG   + ++      S K Q S+       S + +++  WR + D E +RKK
Sbjct: 17  MDIVNGKGYGVGGTTQVYSTRPDSPKFQPSIPPPPGSTSKTRTTATPWRLI-DAETKRKK 76

Query: 61  RVASYKMYSVEGKMKGSFRKSFRWLKDKYTQMLYG 93
           R+A+YK Y++EGK+K + +K F W+KD+Y+ +++G
Sbjct: 77  RIATYKTYALEGKVKSTVKKGFHWIKDRYSHIIHG 110

The following BLAST results are available for this feature:

BLAST of CsGy6G018740 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G018740 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0064729.1	4.65e-59	100.00	hypothetical protein E6C27_scaffold82G00330 [Cucumis melo var. makuwa]	[more]
XP_038884184.1	2.97e-48	89.36	uncharacterized protein LOC120075092 [Benincasa hispida]	[more]
KAG7029545.1	3.63e-42	82.98	hypothetical protein SDJN02_07884, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6598609.1	5.25e-35	82.22	hypothetical protein SDJN03_08387, partial [Cucurbita argyrosperma subsp. sorori...	[more]
PON95996.1	1.73e-34	59.66	hypothetical protein TorRG33x02_082440 [Trema orientale]	[more]

BLAST of CsGy6G018740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VGY1	2.25e-59	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KFK3	1.22e-49	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G364115 PE=4 SV=1	[more]
A0A2P5FE02	8.37e-35	59.66	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_082440 PE=4 SV...	[more]
A0A2P5DEK8	5.60e-33	57.14	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_071680 PE...	[more]
A0A6P3ZT47	6.50e-32	86.36	uncharacterized protein LOC107420071 OS=Ziziphus jujuba OX=326968 GN=LOC10742007...	[more]

BLAST of CsGy6G018740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11970.1	3.6e-19	50.93	Protein of unknown function (DUF3511)	[more]
AT2G19460.1	1.0e-13	47.31	Protein of unknown function (DUF3511)	[more]
AT3G13910.1	2.7e-11	47.13	Protein of unknown function (DUF3511)	[more]
AT1G72720.1	4.0e-10	39.02	Protein of unknown function (DUF3511)	[more]
AT3G62640.1	2.8e-08	33.68	Protein of unknown function (DUF3511)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 49..92 e-value: 7.9E-25 score: 86.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	PANTHER	PTHR33193:SF57	SUBFAMILY NOT NAMED	coord: 7..93
None	No IPR available	PANTHER	PTHR33193	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 7..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G018740.1	CsGy6G018740.1	mRNA