CsGy6G018650 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTCAGTGGGAAACTGCCTGTCAACCTAAACTCACTTCATATTTTTGCTCCTCTCTGTTCTACCATAACATTTTTTTTTTTTAATTTCAATTTCAAAACCAAGAAGTGTTTACATGTCTTACAATAGTAACCAGCACCTCACTACGTCGGAGAGTGATCTTTCCGAGCAGCCCGGGTTCGAGTTTACGGATTGGATGTTTGATGGGTGGCTGAATGAAAACTCTTCGTCTCTGACTGACTCGGTGATGTACCCAGTTTATCAAGAGGGGGAGGTTGATGAGTTTGTTGGGAACACCATTCAGCAAGGAGAGCCTAGCAGCAGTAAGCACATAACTCTTATTACATTTTAGCATTTGTGAGTTTTTATATCTTTGGGTTCTGTATCAGTCAGGTGGAATCTTCTTGCTAGCCACCATTAAAGATTGTACTGCTATTTATATTTCTAGAAGCAGTGGTACTAATATCTCTTTTACCTCTCCCCTTTTTGCATTTCTCTCTCCTACTTGTCAAAAACTTGATGAGATCGCCAATGAGTAGCTAAATATATTATCTCTTTTGAGGTTGTGATCTCACCTCGTGTATGATCTTGAATGGTGTTTGTAGGAGACTATGGGAGAGAGAGGGAAATTAGAGAAAGATTTGCATTCAAGACAAAATCAGAAGTTGAGATTTTGGATGATGGTTTCAAGTGGAGGAAATATGGGAAGAAGATGGTGAAGAACAGCCCAAATCCAAGGTAAGAAAACAAAAGGACTAGTAATGTTCTTAATTTAGCATTAAATTTTGTCCTAAGATAAAATGTTACAATCCTAGAAACATTAAACCAAAGATGATCAAGAAACCCAATGAAAACAGGTCTGTTTGTGTTAATTGTTAATCTGAATTGGCTCAACCAACCATCTGTTAAATGCAGGAACTACTACAAATGCTCAGTCGAAGGCTGCCCAGTGAAGAAGAGAGTCGAAAGAGATCGAGAGGATCCAAAATACGTGATAACGACGTATGAGGGTGTTCATACTCATGAAAGCTCTTGA GTCAGTGGGAAACTGCCTGTCAACCTAAACTCACTTCATATTTTTGCTCCTCTCTGTTCTACCATAACATTTTTTTTTTTTAATTTCAATTTCAAAACCAAGAAGTGTTTACATGTCTTACAATAGTAACCAGCACCTCACTACGTCGGAGAGTGATCTTTCCGAGCAGCCCGGGTTCGAGTTTACGGATTGGATGTTTGATGGGTGGCTGAATGAAAACTCTTCGTCTCTGACTGACTCGGTGATGTACCCAGTTTATCAAGAGGGGGAGGTTGATGAGTTTGTTGGGAACACCATTCAGCAAGGAGAGCCTAGCAGCAGAGACTATGGGAGAGAGAGGGAAATTAGAGAAAGATTTGCATTCAAGACAAAATCAGAAGTTGAGATTTTGGATGATGGTTTCAAGTGGAGGAAATATGGGAAGAAGATGGTGAAGAACAGCCCAAATCCAAGGAACTACTACAAATGCTCAGTCGAAGGCTGCCCAGTGAAGAAGAGAGTCGAAAGAGATCGAGAGGATCCAAAATACGTGATAACGACGTATGAGGGTGTTCATACTCATGAAAGCTCTTGA ATGTCTTACAATAGTAACCAGCACCTCACTACGTCGGAGAGTGATCTTTCCGAGCAGCCCGGGTTCGAGTTTACGGATTGGATGTTTGATGGGTGGCTGAATGAAAACTCTTCGTCTCTGACTGACTCGGTGATGTACCCAGTTTATCAAGAGGGGGAGGTTGATGAGTTTGTTGGGAACACCATTCAGCAAGGAGAGCCTAGCAGCAGAGACTATGGGAGAGAGAGGGAAATTAGAGAAAGATTTGCATTCAAGACAAAATCAGAAGTTGAGATTTTGGATGATGGTTTCAAGTGGAGGAAATATGGGAAGAAGATGGTGAAGAACAGCCCAAATCCAAGGAACTACTACAAATGCTCAGTCGAAGGCTGCCCAGTGAAGAAGAGAGTCGAAAGAGATCGAGAGGATCCAAAATACGTGATAACGACGTATGAGGGTGTTCATACTCATGAAAGCTCTTGA MSYNSNQHLTTSESDLSEQPGFEFTDWMFDGWLNENSSSLTDSVMYPVYQEGEVDEFVGNTIQQGEPSSRDYGREREIRERFAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDREDPKYVITTYEGVHTHESS* Homology
BLAST of CsGy6G018650 vs. ExPASy Swiss-Prot
Match: Q8VWQ5 (Probable WRKY transcription factor 50 OS=Arabidopsis thaliana OX=3702 GN=WRKY50 PE=2 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 1.5e-32 Identity = 62/78 (79.49%), Postives = 72/78 (92.31%), Query Frame = 0
BLAST of CsGy6G018650 vs. ExPASy Swiss-Prot
Match: Q93WU9 (Probable WRKY transcription factor 51 OS=Arabidopsis thaliana OX=3702 GN=WRKY51 PE=1 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 6.5e-28 Identity = 66/142 (46.48%), Postives = 88/142 (61.97%), Query Frame = 0
BLAST of CsGy6G018650 vs. ExPASy Swiss-Prot
Match: Q9FGZ4 (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 PE=2 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 7.5e-24 Identity = 57/117 (48.72%), Postives = 77/117 (65.81%), Query Frame = 0
BLAST of CsGy6G018650 vs. ExPASy Swiss-Prot
Match: Q9S763 (Probable WRKY transcription factor 45 OS=Arabidopsis thaliana OX=3702 GN=WRKY45 PE=1 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 2.2e-23 Identity = 51/90 (56.67%), Postives = 70/90 (77.78%), Query Frame = 0
BLAST of CsGy6G018650 vs. ExPASy Swiss-Prot
Match: Q93WV4 (WRKY transcription factor 71 OS=Arabidopsis thaliana OX=3702 GN=WRKY71 PE=2 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 2.8e-23 Identity = 56/122 (45.90%), Postives = 79/122 (64.75%), Query Frame = 0
BLAST of CsGy6G018650 vs. NCBI nr
Match: XP_004144271.1 (probable WRKY transcription factor 50 [Cucumis sativus]) HSP 1 Score: 320 bits (820), Expect = 1.97e-110 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of CsGy6G018650 vs. NCBI nr
Match: XP_008445519.1 (PREDICTED: probable WRKY transcription factor 50 isoform X1 [Cucumis melo] >KAA0064721.1 putative WRKY transcription factor 50 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 314 bits (805), Expect = 3.83e-108 Identity = 149/153 (97.39%), Postives = 152/153 (99.35%), Query Frame = 0
BLAST of CsGy6G018650 vs. NCBI nr
Match: TYK00741.1 (putative WRKY transcription factor 50 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 300 bits (767), Expect = 4.95e-102 Identity = 148/174 (85.06%), Postives = 151/174 (86.78%), Query Frame = 0
BLAST of CsGy6G018650 vs. NCBI nr
Match: XP_038884623.1 (probable WRKY transcription factor 50 isoform X2 [Benincasa hispida]) HSP 1 Score: 296 bits (757), Expect = 8.03e-101 Identity = 141/153 (92.16%), Postives = 145/153 (94.77%), Query Frame = 0
BLAST of CsGy6G018650 vs. NCBI nr
Match: XP_023546261.1 (probable WRKY transcription factor 50 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 290 bits (743), Expect = 1.10e-98 Identity = 136/153 (88.89%), Postives = 143/153 (93.46%), Query Frame = 0
BLAST of CsGy6G018650 vs. ExPASy TrEMBL
Match: A0A0A0KD40 (WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363560 PE=4 SV=1) HSP 1 Score: 320 bits (820), Expect = 9.56e-111 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of CsGy6G018650 vs. ExPASy TrEMBL
Match: A0A5A7VG90 (Putative WRKY transcription factor 50 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00250 PE=4 SV=1) HSP 1 Score: 314 bits (805), Expect = 1.86e-108 Identity = 149/153 (97.39%), Postives = 152/153 (99.35%), Query Frame = 0
BLAST of CsGy6G018650 vs. ExPASy TrEMBL
Match: A0A1S3BCG1 (probable WRKY transcription factor 50 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488510 PE=4 SV=1) HSP 1 Score: 314 bits (805), Expect = 1.86e-108 Identity = 149/153 (97.39%), Postives = 152/153 (99.35%), Query Frame = 0
BLAST of CsGy6G018650 vs. ExPASy TrEMBL
Match: A0A5D3BLP6 (Putative WRKY transcription factor 50 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00310 PE=4 SV=1) HSP 1 Score: 300 bits (767), Expect = 2.40e-102 Identity = 148/174 (85.06%), Postives = 151/174 (86.78%), Query Frame = 0
BLAST of CsGy6G018650 vs. ExPASy TrEMBL
Match: A0A6J1BQD9 (probable WRKY transcription factor 50 OS=Momordica charantia OX=3673 GN=LOC111004843 PE=4 SV=1) HSP 1 Score: 288 bits (737), Expect = 4.67e-98 Identity = 139/155 (89.68%), Postives = 146/155 (94.19%), Query Frame = 0
BLAST of CsGy6G018650 vs. TAIR 10
Match: AT5G26170.1 (WRKY DNA-binding protein 50 ) HSP 1 Score: 140.6 bits (353), Expect = 1.1e-33 Identity = 62/78 (79.49%), Postives = 72/78 (92.31%), Query Frame = 0
BLAST of CsGy6G018650 vs. TAIR 10
Match: AT5G64810.1 (WRKY DNA-binding protein 51 ) HSP 1 Score: 125.2 bits (313), Expect = 4.6e-29 Identity = 66/142 (46.48%), Postives = 88/142 (61.97%), Query Frame = 0
BLAST of CsGy6G018650 vs. TAIR 10
Match: AT5G49520.1 (WRKY DNA-binding protein 48 ) HSP 1 Score: 111.7 bits (278), Expect = 5.3e-25 Identity = 57/117 (48.72%), Postives = 77/117 (65.81%), Query Frame = 0
BLAST of CsGy6G018650 vs. TAIR 10
Match: AT3G01970.1 (WRKY DNA-binding protein 45 ) HSP 1 Score: 110.2 bits (274), Expect = 1.5e-24 Identity = 51/90 (56.67%), Postives = 70/90 (77.78%), Query Frame = 0
BLAST of CsGy6G018650 vs. TAIR 10
Match: AT1G29860.1 (WRKY DNA-binding protein 71 ) HSP 1 Score: 109.8 bits (273), Expect = 2.0e-24 Identity = 56/122 (45.90%), Postives = 79/122 (64.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|