CsGy6G018620 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G018620
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Ankyrin repeat-containing protein
Location	Gy14Chr6: 19356137 .. 19356715 (+)
RNA-Seq Expression	CsGy6G018620
Synteny	CsGy6G018620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAGACAGAACAATAATGGAGCTGAATCAGTAGCAATAACAATAGACACAACAGACGATACAGGTCATGAGAAGAACAAGATGATGAACAACAATAATTGGATGAGAGAAGACACAGATTTCCTAATGGTAGTAACGACATTCATTGCAACCGTAGCATTTCAAATCGGGACGAACCCGCCGGGTGGCGTATGGCAAGAAGACGATAAACAGGGAAAGTACTTTGCTGGGAAATCCATAATGGCTACAAAATCTCCTTCTGATTTCATTGGATTTTTGGTAACAATTACAGCTTGCTTTGTGTTTTCAGCAATGCAATTCGCTGTTCTGTTCCTTAAGAAATGGCCAGTTGGTGCCAAAAATTGGTCATTTTCAAGGTTCATTCTTTATTCAACTATGGGATTGGCCGTTTCTTCCATGGGATTTGCTTATGGATGCTCTGTTAGAGCTTACACACCTGACTCAGAGGAAAATACTCTTTTTGTTATTTCTTTTATTACTATGTTGGGATTTCCTATTAGTTTGGCTGCCATTTCAATTTATTTACAATACTTTAGTAAATCTTCATCTTCTTAA

mRNA sequence

ATGTCAAGACAGAACAATAATGGAGCTGAATCAGTAGCAATAACAATAGACACAACAGACGATACAGGTCATGAGAAGAACAAGATGATGAACAACAATAATTGGATGAGAGAAGACACAGATTTCCTAATGGTAGTAACGACATTCATTGCAACCGTAGCATTTCAAATCGGGACGAACCCGCCGGGTGGCGTATGGCAAGAAGACGATAAACAGGGAAAGTACTTTGCTGGGAAATCCATAATGGCTACAAAATCTCCTTCTGATTTCATTGGATTTTTGGTAACAATTACAGCTTGCTTTGTGTTTTCAGCAATGCAATTCGCTGTTCTGTTCCTTAAGAAATGGCCAGTTGGTGCCAAAAATTGGTCATTTTCAAGGTTCATTCTTTATTCAACTATGGGATTGGCCGTTTCTTCCATGGGATTTGCTTATGGATGCTCTGTTAGAGCTTACACACCTGACTCAGAGGAAAATACTCTTTTTGTTATTTCTTTTATTACTATGTTGGGATTTCCTATTAGTTTGGCTGCCATTTCAATTTATTTACAATACTTTAGTAAATCTTCATCTTCTTAA

Coding sequence (CDS)

ATGTCAAGACAGAACAATAATGGAGCTGAATCAGTAGCAATAACAATAGACACAACAGACGATACAGGTCATGAGAAGAACAAGATGATGAACAACAATAATTGGATGAGAGAAGACACAGATTTCCTAATGGTAGTAACGACATTCATTGCAACCGTAGCATTTCAAATCGGGACGAACCCGCCGGGTGGCGTATGGCAAGAAGACGATAAACAGGGAAAGTACTTTGCTGGGAAATCCATAATGGCTACAAAATCTCCTTCTGATTTCATTGGATTTTTGGTAACAATTACAGCTTGCTTTGTGTTTTCAGCAATGCAATTCGCTGTTCTGTTCCTTAAGAAATGGCCAGTTGGTGCCAAAAATTGGTCATTTTCAAGGTTCATTCTTTATTCAACTATGGGATTGGCCGTTTCTTCCATGGGATTTGCTTATGGATGCTCTGTTAGAGCTTACACACCTGACTCAGAGGAAAATACTCTTTTTGTTATTTCTTTTATTACTATGTTGGGATTTCCTATTAGTTTGGCTGCCATTTCAATTTATTTACAATACTTTAGTAAATCTTCATCTTCTTAA

Protein sequence

MSRQNNNGAESVAITIDTTDDTGHEKNKMMNNNNWMREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGAKNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAISIYLQYFSKSSSS*

Homology

[Close]

BLAST of CsGy6G018620 vs. NCBI nr
Match: XP_011657373.1 (uncharacterized protein LOC105435852 [Cucumis sativus] >KGN47597.1 hypothetical protein Csa_019050 [Cucumis sativus])

HSP 1 Score: 383 bits (984), Expect = 3.74e-134
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MSRQNNNGAESVAITIDTTDDTGHEKNKMMNNNNWMREDTDFLMVVTTFIATVAFQIGTN 60
           MSRQNNNGAESVAITIDTTDDTGHEKNKMMNNNNWMREDTDFLMVVTTFIATVAFQIGTN
Sbjct: 1   MSRQNNNGAESVAITIDTTDDTGHEKNKMMNNNNWMREDTDFLMVVTTFIATVAFQIGTN 60

Query: 61  PPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGA 120
           PPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGA
Sbjct: 61  PPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGA 120

Query: 121 KNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAIS 180
           KNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAIS
Sbjct: 121 KNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAIS 180

Query: 181 IYLQYFSKSSSS 192
           IYLQYFSKSSSS
Sbjct: 181 IYLQYFSKSSSS 192

[Close]

BLAST of CsGy6G018620 vs. NCBI nr
Match: XP_008445596.1 (PREDICTED: uncharacterized protein LOC103488576 [Cucumis melo] >KAA0064718.1 ankyrin repeat-containing protein [Cucumis melo var. makuwa] >TYK00738.1 ankyrin repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 350 bits (899), Expect = 3.18e-121
Identity = 177/192 (92.19%), Postives = 185/192 (96.35%), Query Frame = 0


Query: 1   MSRQNNNGAESVAITIDTTDDTGHEKNKMMNNNNWMREDTDFLMVVTTFIATVAFQIGTN 60
           MSRQNN GAESVAITIDTT+ TGHEKNKMMNNNNW+REDTDFLMVVTTFIATVAFQIGTN
Sbjct: 1   MSRQNN-GAESVAITIDTTE-TGHEKNKMMNNNNWIREDTDFLMVVTTFIATVAFQIGTN 60

Query: 61  PPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGA 120
           PPGGVWQEDDKQGKYFAGKSIMATKSPSDF G+LVTITACFVFSAMQFAVLFLKKWPVGA
Sbjct: 61  PPGGVWQEDDKQGKYFAGKSIMATKSPSDFSGYLVTITACFVFSAMQFAVLFLKKWPVGA 120

Query: 121 KNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAIS 180
           KNWSFSRFILYSTMGLA+SSMG AYGCSVRAYTPDSEE T +VISFITMLGFPI LAAIS
Sbjct: 121 KNWSFSRFILYSTMGLAISSMGIAYGCSVRAYTPDSEEKTRYVISFITMLGFPIGLAAIS 180

Query: 181 IYLQYFSKSSSS 192
           +YL+YF+KSSSS
Sbjct: 181 LYLEYFNKSSSS 190

[Close]

BLAST of CsGy6G018620 vs. NCBI nr
Match: XP_016899921.1 (PREDICTED: uncharacterized protein LOC107990705 [Cucumis melo])

HSP 1 Score: 134 bits (338), Expect = 4.80e-36
Identity = 80/179 (44.69%), Postives = 109/179 (60.89%), Query Frame = 0


Query: 10  ESVAITIDTTDDTGHEKNKMMNNNNWMRE----DTDFLMVVTTFIATVAFQIGTNPPGGV 69
           E  ++    TD T +EK+K        +E    D DFLMV TTFIA +AFQ GTNPPGGV
Sbjct: 6   EDESVLSIETDQTINEKDKENQKKKKKKEGEGRDRDFLMVATTFIAAMAFQAGTNPPGGV 65

Query: 70  WQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGAKNWSF 129
           WQ DD    Y AGKSIMATKSPS FI F+  +T CF  SAMQF VL  K      K+WS 
Sbjct: 66  WQ-DDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFACSAMQFIVLLGKS---SEKSWSV 125

Query: 130 SRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAISIYLQ 184
           S+  +Y TMG  +S++  AY  +++A TP+++ + + ++   T L   + +  IS+Y++
Sbjct: 126 SKSFIYFTMGSGISAIVVAYWSAIKALTPEAQMSHV-IVMLKTTLVLSVVVLPISMYIE 179

[Close]

BLAST of CsGy6G018620 vs. NCBI nr
Match: XP_038884181.1 (uncharacterized protein LOC120075089 [Benincasa hispida])

HSP 1 Score: 133 bits (334), Expect = 1.98e-35
Identity = 79/179 (44.13%), Postives = 110/179 (61.45%), Query Frame = 0


Query: 10  ESVAITIDTTDDTGHEKNKMMNNNNWMREDTDFLMVVTTFIATVAFQIGTNPPGGVWQED 69
           E+ A++IDT  ++  ++ +   N  W+  D DF+MV+ TFIATVAFQ GTNPPGGVWQED
Sbjct: 11  EATAVSIDTERESRKDREEA--NQGWIERDVDFVMVIVTFIATVAFQAGTNPPGGVWQED 70

Query: 70  DKQG--KYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGAKNWSFSR 129
            K     Y AGKSIM TKSPS++I F+V +T C  FS +Q  V+ L  W +  K+WS  R
Sbjct: 71  KKVNGTDYIAGKSIMGTKSPSEYIKFMVGVTVCLAFSVIQLIVM-LFNWYL--KSWSIRR 130

Query: 130 FILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAISIYLQYF 186
            ILY  M L ++ M  A+  S+ A TP ++  T     F +++G  +SL  +   L Y+
Sbjct: 131 AILYMLMLLTITPMVVAFWSSLLALTP-ADLMTEIKAGFWSVIG--VSLIVLPFVLLYY 181

[Close]

BLAST of CsGy6G018620 vs. NCBI nr
Match: XP_022949196.1 (uncharacterized protein LOC111452618 [Cucurbita moschata])

HSP 1 Score: 126 bits (317), Expect = 8.18e-33
Identity = 69/162 (42.59%), Postives = 100/162 (61.73%), Query Frame = 0


Query: 23  GHEKNKMMNNNNWMREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGKYFAGKSIM 82
           G ++NK      W + D ++L++V TF+ATVAFQ G +PPGGVWQ+DDK     AG SIM
Sbjct: 30  GEDQNK---EETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIM 89

Query: 83  ATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGAKNWSFSRFILYSTMGLAVSSMG 142
           ATK P++F  F+V +T C + S +QF VLF++   + +   S SR  LY T+  A+ SM 
Sbjct: 90  ATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVE---LPSDTPSLSRKYLYYTLFFALGSML 149

Query: 143 FAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAISIYLQ 184
            +Y  SV+AYTP+S       +  +T +G  + L  IS++ Q
Sbjct: 150 SSYVSSVKAYTPESMRTQTITVLALT-IGIGVVLVGISLFKQ 184

[Close]

BLAST of CsGy6G018620 vs. ExPASy TrEMBL
Match: A0A0A0KGU1 (PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363530 PE=4 SV=1)

HSP 1 Score: 383 bits (984), Expect = 1.81e-134
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MSRQNNNGAESVAITIDTTDDTGHEKNKMMNNNNWMREDTDFLMVVTTFIATVAFQIGTN 60
           MSRQNNNGAESVAITIDTTDDTGHEKNKMMNNNNWMREDTDFLMVVTTFIATVAFQIGTN
Sbjct: 1   MSRQNNNGAESVAITIDTTDDTGHEKNKMMNNNNWMREDTDFLMVVTTFIATVAFQIGTN 60

Query: 61  PPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGA 120
           PPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGA
Sbjct: 61  PPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGA 120

Query: 121 KNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAIS 180
           KNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAIS
Sbjct: 121 KNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAIS 180

Query: 181 IYLQYFSKSSSS 192
           IYLQYFSKSSSS
Sbjct: 181 IYLQYFSKSSSS 192

[Close]

BLAST of CsGy6G018620 vs. ExPASy TrEMBL
Match: A0A5A7VAU9 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00280 PE=4 SV=1)

HSP 1 Score: 350 bits (899), Expect = 1.54e-121
Identity = 177/192 (92.19%), Postives = 185/192 (96.35%), Query Frame = 0


Query: 1   MSRQNNNGAESVAITIDTTDDTGHEKNKMMNNNNWMREDTDFLMVVTTFIATVAFQIGTN 60
           MSRQNN GAESVAITIDTT+ TGHEKNKMMNNNNW+REDTDFLMVVTTFIATVAFQIGTN
Sbjct: 1   MSRQNN-GAESVAITIDTTE-TGHEKNKMMNNNNWIREDTDFLMVVTTFIATVAFQIGTN 60

Query: 61  PPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGA 120
           PPGGVWQEDDKQGKYFAGKSIMATKSPSDF G+LVTITACFVFSAMQFAVLFLKKWPVGA
Sbjct: 61  PPGGVWQEDDKQGKYFAGKSIMATKSPSDFSGYLVTITACFVFSAMQFAVLFLKKWPVGA 120

Query: 121 KNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAIS 180
           KNWSFSRFILYSTMGLA+SSMG AYGCSVRAYTPDSEE T +VISFITMLGFPI LAAIS
Sbjct: 121 KNWSFSRFILYSTMGLAISSMGIAYGCSVRAYTPDSEEKTRYVISFITMLGFPIGLAAIS 180

Query: 181 IYLQYFSKSSSS 192
           +YL+YF+KSSSS
Sbjct: 181 LYLEYFNKSSSS 190

[Close]

BLAST of CsGy6G018620 vs. ExPASy TrEMBL
Match: A0A1S3BD33 (uncharacterized protein LOC103488576 OS=Cucumis melo OX=3656 GN=LOC103488576 PE=4 SV=1)

HSP 1 Score: 350 bits (899), Expect = 1.54e-121
Identity = 177/192 (92.19%), Postives = 185/192 (96.35%), Query Frame = 0


Query: 1   MSRQNNNGAESVAITIDTTDDTGHEKNKMMNNNNWMREDTDFLMVVTTFIATVAFQIGTN 60
           MSRQNN GAESVAITIDTT+ TGHEKNKMMNNNNW+REDTDFLMVVTTFIATVAFQIGTN
Sbjct: 1   MSRQNN-GAESVAITIDTTE-TGHEKNKMMNNNNWIREDTDFLMVVTTFIATVAFQIGTN 60

Query: 61  PPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGA 120
           PPGGVWQEDDKQGKYFAGKSIMATKSPSDF G+LVTITACFVFSAMQFAVLFLKKWPVGA
Sbjct: 61  PPGGVWQEDDKQGKYFAGKSIMATKSPSDFSGYLVTITACFVFSAMQFAVLFLKKWPVGA 120

Query: 121 KNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAIS 180
           KNWSFSRFILYSTMGLA+SSMG AYGCSVRAYTPDSEE T +VISFITMLGFPI LAAIS
Sbjct: 121 KNWSFSRFILYSTMGLAISSMGIAYGCSVRAYTPDSEEKTRYVISFITMLGFPIGLAAIS 180

Query: 181 IYLQYFSKSSSS 192
           +YL+YF+KSSSS
Sbjct: 181 LYLEYFNKSSSS 190

[Close]

BLAST of CsGy6G018620 vs. ExPASy TrEMBL
Match: A0A1S4DVA8 (uncharacterized protein LOC107990705 OS=Cucumis melo OX=3656 GN=LOC107990705 PE=4 SV=1)

HSP 1 Score: 134 bits (338), Expect = 2.32e-36
Identity = 80/179 (44.69%), Postives = 109/179 (60.89%), Query Frame = 0


Query: 10  ESVAITIDTTDDTGHEKNKMMNNNNWMRE----DTDFLMVVTTFIATVAFQIGTNPPGGV 69
           E  ++    TD T +EK+K        +E    D DFLMV TTFIA +AFQ GTNPPGGV
Sbjct: 6   EDESVLSIETDQTINEKDKENQKKKKKKEGEGRDRDFLMVATTFIAAMAFQAGTNPPGGV 65

Query: 70  WQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGAKNWSF 129
           WQ DD    Y AGKSIMATKSPS FI F+  +T CF  SAMQF VL  K      K+WS 
Sbjct: 66  WQ-DDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFACSAMQFIVLLGKS---SEKSWSV 125

Query: 130 SRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAISIYLQ 184
           S+  +Y TMG  +S++  AY  +++A TP+++ + + ++   T L   + +  IS+Y++
Sbjct: 126 SKSFIYFTMGSGISAIVVAYWSAIKALTPEAQMSHV-IVMLKTTLVLSVVVLPISMYIE 179

[Close]

BLAST of CsGy6G018620 vs. ExPASy TrEMBL
Match: A0A6J1GBC1 (uncharacterized protein LOC111452618 OS=Cucurbita moschata OX=3662 GN=LOC111452618 PE=4 SV=1)

HSP 1 Score: 126 bits (317), Expect = 3.96e-33
Identity = 69/162 (42.59%), Postives = 100/162 (61.73%), Query Frame = 0


Query: 23  GHEKNKMMNNNNWMREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGKYFAGKSIM 82
           G ++NK      W + D ++L++V TF+ATVAFQ G +PPGGVWQ+DDK     AG SIM
Sbjct: 30  GEDQNK---EETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSIM 89

Query: 83  ATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGAKNWSFSRFILYSTMGLAVSSMG 142
           ATK P++F  F+V +T C + S +QF VLF++   + +   S SR  LY T+  A+ SM 
Sbjct: 90  ATKFPAEFTTFVVGVTVCMIVSMLQFIVLFVE---LPSDTPSLSRKYLYYTLFFALGSML 149

Query: 143 FAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAISIYLQ 184
            +Y  SV+AYTP+S       +  +T +G  + L  IS++ Q
Sbjct: 150 SSYVSSVKAYTPESMRTQTITVLALT-IGIGVVLVGISLFKQ 184

[Close]

BLAST of CsGy6G018620 vs. TAIR 10
Match: AT5G54710.1 (Ankyrin repeat family protein )

HSP 1 Score: 46.2 bits (108), Expect = 3.4e-05
Identity = 49/187 (26.20%), Postives = 83/187 (44.39%), Query Frame = 0


Query: 3   RQNNNG----AESVAITIDTTDDTGHEKNKMMNNNNWMREDTDFLMVVTTFIATVAFQIG 62
           R  NNG    +ES A+ +         K + M++ + ++   + + +V   IA+VAF  G
Sbjct: 384 RNTNNGEKLSSESRAMDLLREGRDPRNKEREMHSES-LQNARNTITIVAVLIASVAFTCG 443

Query: 63  TNPPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPV 122
            NPPGGV Q+    GK  AG+++        F  F V      +F+++    L +     
Sbjct: 444 INPPGGVHQDGPFIGKATAGRTLA-------FKIFSVANNIA-LFTSLSIVTLLVSIISY 503

Query: 123 GAKNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAA 182
             K       I +  M LAV+SM  AY  S     P +E +   V  + T     ++L +
Sbjct: 504 RTKALKMCVVIAHKMMWLAVASMATAYAASAWITVPHNEGSKWLV--YTTSAIASVALGS 559

Query: 183 ISIYLQY 186
           + +Y+ +
Sbjct: 564 MFVYVSF 559

[Close]

BLAST of CsGy6G018620 vs. TAIR 10
Match: AT5G50140.1 (Ankyrin repeat family protein )

HSP 1 Score: 45.8 bits (107), Expect = 4.5e-05
Identity = 36/117 (30.77%), Postives = 53/117 (45.30%), Query Frame = 0


Query: 43  LMVVTTFIATVAFQIGTNPPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFV 102
           + VV   IA+V F  G NPPGGV+Q+    GK  AG ++        F  F V+  +  +
Sbjct: 367 ITVVAVLIASVTFTCGLNPPGGVYQDGHFIGKATAGGTVA-------FKVFSVS-NSIAL 426

Query: 103 FSAMQFAVLFLKKWPVGAKNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEEN 160
           F+++   +L L   P   K+      I +  + LAV +M  AY        P S  N
Sbjct: 427 FTSLCIVILLLSIIPFRTKSLKTFLIITHKMIWLAVIAMASAYVAGTCVTLPHSRGN 475

[Close]

BLAST of CsGy6G018620 vs. TAIR 10
Match: AT3G13950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13266.1); Has 339 Blast hits to 265 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 339; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 1.0e-04
Identity = 27/85 (31.76%), Postives = 44/85 (51.76%), Query Frame = 0


Query: 29  MMNNNNWMREDTDFLMVVTTFIATVAFQIGTNPPGGVWQED-----DKQG-----KYFAG 88
           +    +W+ +    LMV  T IA ++FQ+  NPPGGVWQ D     ++ G     K  AG
Sbjct: 23  LKRQGDWLEKTRGNLMVTATVIAGMSFQVMVNPPGGVWQSDNCSFGNQTGTAPFCKGRAG 82

Query: 89  KSIMATKSPS--DFIGFLVTITACF 102
            +++  +S     +IG +++ T  F
Sbjct: 83  TAVLEYESSKRIAYIGMIISSTVSF 107

[Close]

BLAST of CsGy6G018620 vs. TAIR 10
Match: AT1G34050.1 (Ankyrin repeat family protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.7e-04
Identity = 37/131 (28.24%), Postives = 64/131 (48.85%), Query Frame = 0


Query: 43  LMVVTTFIATVAFQIGTNPPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFV 102
           + +V   IA+VAF  G NPPGGV+QE   +GK  AG+++        F  F ++     +
Sbjct: 399 ITIVAVLIASVAFTCGINPPGGVYQEGPYKGKSTAGRTLA-------FQVFSISNNIA-L 458

Query: 103 FSAMQFAVLFLKKWPVGAKNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSE-ENTL 162
           F+++   +L +   P   +       + +  + +AV+SM  AY  +     P  E +  L
Sbjct: 459 FTSLCIVILLVSIIPYRTRPLKNFLKLTHRILWVAVASMALAYVSAASIIIPHVEGKRWL 518

Query: 163 F--VISFITML 171
           F  V+S  T++
Sbjct: 519 FTTVLSISTLM 521

The following BLAST results are available for this feature:

BLAST of CsGy6G018620 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G018620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657373.1	3.74e-134	100.00	uncharacterized protein LOC105435852 [Cucumis sativus] >KGN47597.1 hypothetical ...	[more]
XP_008445596.1	3.18e-121	92.19	PREDICTED: uncharacterized protein LOC103488576 [Cucumis melo] >KAA0064718.1 ank...	[more]
XP_016899921.1	4.80e-36	44.69	PREDICTED: uncharacterized protein LOC107990705 [Cucumis melo]	[more]
XP_038884181.1	1.98e-35	44.13	uncharacterized protein LOC120075089 [Benincasa hispida]	[more]
XP_022949196.1	8.18e-33	42.59	uncharacterized protein LOC111452618 [Cucurbita moschata]	[more]

BLAST of CsGy6G018620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGU1	1.81e-134	100.00	PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363530 PE=4 SV...	[more]
A0A5A7VAU9	1.54e-121	92.19	Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BD33	1.54e-121	92.19	uncharacterized protein LOC103488576 OS=Cucumis melo OX=3656 GN=LOC103488576 PE=...	[more]
A0A1S4DVA8	2.32e-36	44.69	uncharacterized protein LOC107990705 OS=Cucumis melo OX=3656 GN=LOC107990705 PE=...	[more]
A0A6J1GBC1	3.96e-33	42.59	uncharacterized protein LOC111452618 OS=Cucurbita moschata OX=3662 GN=LOC1114526...	[more]

BLAST of CsGy6G018620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54710.1	3.4e-05	26.20	Ankyrin repeat family protein	[more]
AT5G50140.1	4.5e-05	30.77	Ankyrin repeat family protein	[more]
AT3G13950.1	1.0e-04	31.76	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G34050.1	1.7e-04	28.24	Ankyrin repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026961	PGG domain	PFAM	PF13962	PGG	coord: 34..149 e-value: 4.8E-21 score: 74.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G018620.1	CsGy6G018620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane