CsGy6G018490 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G018490
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	ylmG homolog protein 2, chloroplastic
Location	Gy14Chr6: 19247445 .. 19249511 (+)
RNA-Seq Expression	CsGy6G018490
Synteny	CsGy6G018490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCCACACGACTCGTCACTTCAAAACCCTAAACAAACTTCTACAGCTTTCAACTTCTTTCCAAATTGCATTTCCTCGTTCTCACCCGCATTTTCTCAAACACCTTCTGGACCATCCAGAAGAAGGCAACTCGAATTCGCCCCTCCATGTAATTTTCTTCGCCACCTCCACGAGTCTTTCGCGTCAACTACTGAAAGCTGCATCAGACTCTTTCATTCATTGGCCTCTGAGAATCCATTTCTGCATAAATTGCTCTCGTTGCCTTCTGAGTTCCACCGTTTTCGTTACCAGGTTGCTAACTGCGACTGTATCTTGGACTTCCATCCGTTTGTTTAGTTTGATATTCAGCTAGAATATGACATCGGGGGTTTCGGTTTTCTAATCTCTGAAGTACTTTGTGTTGAATTCTTTTTTTTTTTTTTTTTTTCAGATCCACGGTATGAACTCCATGAATTTTCGAGCTCTCTCTAGTCATAATTTTGCTGCAGTTTTGCCGGGAGATTCTATGGCAGGACTTGTAGTAGCAAATGGCATTCAGAATTTCTTGAGCCTTTACAATACACTCTTGGTCGTCAGGCTTGTTTTGACTTGGTTTCCGAATACGCCCCCCGCCATTGTTAGTCCGCTAAGGTAACTTTCATTTATTTTTTACATTAACATTGAACAAAAAAGTAGAAAGAAGAAGACTTTGTCACTTGGGTTGATTGTGAGCCTAGAATGAGATTTCTGAACTGAACATAGTATCAAGCTTTTGTATCCTTGTAGCTTGAAAGTGGGAAACATCTATATTGGGTGTGACCATTGTGATTTAGAAGTTGGAAGTTGAGACTGTCTGATCCAACTCACTCAAATTCACATATCAAAAGCTACTGATTCCGTCAAATGTTATATTTGGCATAAGAAACAGATCTTAAAACTTCTGTCAAACAAGTATTTTGGACAAAAAGAAGCCAAGAACATTTTTTTTTTATAAAAAAAATTGTAGTGAAAAAAGAAAAAAGAAAAAAGAAGAGGGTACCACATTGATGAATGAAGCAGTAAGATTACAATCTATTGGTGAGTTACAAGCTACAACAAAGTTTTCCAACTTGAGATTGTTTTACACTAAAGAAAAGCAGTCAAAAGAGGAAGTATCTTTTAAAGGCAGTCATTCATTTCACCACAAAGCAGCTAGAAAAAAGTAAGAAAGACAGCCAACCATAAAACTTGTTTAGTACTACCAAAAGGGATGATCAACCAAAACTGAAGCGATAATTTTGAAAACGTTATGAGGAAATGTTTATGACCAGCCAAAAGCCTCTAAAACAATTAGCTAAAAATTAGGAAATGTTTTCTTAAATATTAATATTCAATAATTAGTTTCGAAGAGTCTCCTTGGCATATTTTTTTGCTTAACCTTTTTTACTAATACTTCTCTATGCATGTTTGGAAGTTGGAGCGATTGTTTAAATGCATAAGAAGTATAAAAGATGTGTTTTTTTAGCACATCAATGTCACTTTAAGCAGACACCAAACATATTTTTCTGTTTTTTTTTTTGTCTTTGTGATTGAAGAGTGCATTGATCCAATGAGTGCACTCAAGTACTATTATTCATATTACTCGGAAACAAATATAACTAAATTGTAATATTTTTTAGTACAACAATTTAGGTGCTATGATTGAGGTGCCTTTCCTAGTTTATCTTAGATTCCCAAACCATACACACAAAAAAATTAAGAACTTGAAACAATATATACGTAAAAGAAGTTGCAATGTAAAATTTGGTGCTAACTGTCATGGTTTGTCTCTGTTTCAGCACGTTATGCGACCCATATTTGAACATATTTCGTGGGATTATTCCACCTCTTGGAGGGACACTTGATTTATCTCCAATATTGGCATTCTTGGTCTTAAACGCCTTTACCAGCACTGCCGCTGCACTTCCTGCTGAACTTCCAGCCCCAAATTCGTCTCTTGCAAATCCTAATCCTTTAAAAGGCTCTGTTGATCTTACATCATCACAAAAGAAATGGATGAAAAGGCTGCAGGGAAGTGAAAAGAACAATGCCGATGCCTCTCAATAG

mRNA sequence

ATGACTCCACACGACTCGTCACTTCAAAACCCTAAACAAACTTCTACAGCTTTCAACTTCTTTCCAAATTGCATTTCCTCGTTCTCACCCGCATTTTCTCAAACACCTTCTGGACCATCCAGAAGAAGGCAACTCGAATTCGCCCCTCCATGTAATTTTCTTCGCCACCTCCACGAGTCTTTCGCGTCAACTACTGAAAGCTGCATCAGACTCTTTCATTCATTGGCCTCTGAGAATCCATTTCTGCATAAATTGCTCTCGTTGCCTTCTGAGTTCCACCGTTTTCGTTACCAGATCCACGGTATGAACTCCATGAATTTTCGAGCTCTCTCTAGTCATAATTTTGCTGCAGTTTTGCCGGGAGATTCTATGGCAGGACTTGTAGTAGCAAATGGCATTCAGAATTTCTTGAGCCTTTACAATACACTCTTGGTCGTCAGGCTTGTTTTGACTTGGTTTCCGAATACGCCCCCCGCCATTGTTAGTCCGCTAAGCACGTTATGCGACCCATATTTGAACATATTTCGTGGGATTATTCCACCTCTTGGAGGGACACTTGATTTATCTCCAATATTGGCATTCTTGGTCTTAAACGCCTTTACCAGCACTGCCGCTGCACTTCCTGCTGAACTTCCAGCCCCAAATTCGTCTCTTGCAAATCCTAATCCTTTAAAAGGCTCTGTTGATCTTACATCATCACAAAAGAAATGGATGAAAAGGCTGCAGGGAAGTGAAAAGAACAATGCCGATGCCTCTCAATAG

Coding sequence (CDS)

ATGACTCCACACGACTCGTCACTTCAAAACCCTAAACAAACTTCTACAGCTTTCAACTTCTTTCCAAATTGCATTTCCTCGTTCTCACCCGCATTTTCTCAAACACCTTCTGGACCATCCAGAAGAAGGCAACTCGAATTCGCCCCTCCATGTAATTTTCTTCGCCACCTCCACGAGTCTTTCGCGTCAACTACTGAAAGCTGCATCAGACTCTTTCATTCATTGGCCTCTGAGAATCCATTTCTGCATAAATTGCTCTCGTTGCCTTCTGAGTTCCACCGTTTTCGTTACCAGATCCACGGTATGAACTCCATGAATTTTCGAGCTCTCTCTAGTCATAATTTTGCTGCAGTTTTGCCGGGAGATTCTATGGCAGGACTTGTAGTAGCAAATGGCATTCAGAATTTCTTGAGCCTTTACAATACACTCTTGGTCGTCAGGCTTGTTTTGACTTGGTTTCCGAATACGCCCCCCGCCATTGTTAGTCCGCTAAGCACGTTATGCGACCCATATTTGAACATATTTCGTGGGATTATTCCACCTCTTGGAGGGACACTTGATTTATCTCCAATATTGGCATTCTTGGTCTTAAACGCCTTTACCAGCACTGCCGCTGCACTTCCTGCTGAACTTCCAGCCCCAAATTCGTCTCTTGCAAATCCTAATCCTTTAAAAGGCTCTGTTGATCTTACATCATCACAAAAGAAATGGATGAAAAGGCTGCAGGGAAGTGAAAAGAACAATGCCGATGCCTCTCAATAG

Protein sequence

MTPHDSSLQNPKQTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQLEFAPPCNFLRHLHESFASTTESCIRLFHSLASENPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLPGDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKRLQGSEKNNADASQ*

Homology

[Close]

BLAST of CsGy6G018490 vs. ExPASy Swiss-Prot
Match: Q9C595 (YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG2 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.5e-56
Identity = 130/237 (54.85%), Postives = 160/237 (67.51%), Query Frame = 0


Query: 22  PNCISSFSPAFSQTPSGPSRRRQLEFAPP----CNFLRHLHESFASTTESCIRLFHSLAS 81
           PN   S S AF+QTP   S +  L   PP       ++  H+S  S TE      HSLAS
Sbjct: 22  PNFFVSLSSAFTQTPLVRSNKPNLLLLPPVADSVKLIQDFHQSLISATEKFKGFLHSLAS 81

Query: 82  ENPFLHKLLSLPSEFHRFRYQIHGMNSMNFR-ALSSHNFAAVLPGDSMAGLVVANGIQNF 141
           +NP   + + L SEFH    +I   N+   R A+S+H FAAVLPGDS+AGLVVANG+ NF
Sbjct: 82  KNPLFQEAVRLSSEFHILCDEIRLRNTTRVRFAMSNHGFAAVLPGDSVAGLVVANGLINF 141

Query: 142 LSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLV 201
           L++YNT+LVVRLVLTWFP+ PPAIV+PLSTLCDPYLNIFRG IPPLGG LDLSPILAFLV
Sbjct: 142 LNIYNTILVVRLVLTWFPSAPPAIVNPLSTLCDPYLNIFRGFIPPLGG-LDLSPILAFLV 201

Query: 202 LNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKRLQ-GSEKNNADAS 253
           LNAFTS+A ALP ELP+ +          G+V   SS+ KW++R +  S K++  +S
Sbjct: 202 LNAFTSSAMALPCELPSAD----------GAVSPASSETKWVRRRRLSSHKDHRPSS 247

[Close]

BLAST of CsGy6G018490 vs. ExPASy Swiss-Prot
Match: Q9SRS3 (YlmG homolog protein 1-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG1-1 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.0e-14
Identity = 41/77 (53.25%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 128 VVANGIQNFLSLYNTLLVVRLVLTWFPNTP--PAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
           VVA GI+ +L +Y+ +L+VR++L+WFPN P     +S +  LCDPYLN+FR IIPP+  T
Sbjct: 149 VVAVGIKKWLDIYSGVLMVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPIFDT 208

Query: 188 LDLSPILAFLVLNAFTS 203
           LD+SP+LAF VL    S
Sbjct: 209 LDVSPLLAFAVLGTLGS 225

[Close]

BLAST of CsGy6G018490 vs. ExPASy Swiss-Prot
Match: Q9SUE0 (YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG1-2 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 6.8e-14
Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 128 VVANGIQNFLSLYNTLLVVRLVLTWFPNTP--PAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
           VVA G+  +L +Y+ +L+VR++L+WFPN P     +S +  LCDPYLN+FR IIPP+  T
Sbjct: 135 VVAAGLSKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDT 194

Query: 188 LDLSPILAFLVLNAFTS 203
           LD+SP+LAF VL    S
Sbjct: 195 LDVSPLLAFAVLGTLGS 211

[Close]

BLAST of CsGy6G018490 vs. ExPASy Swiss-Prot
Match: O78424 (Uncharacterized protein ycf19 OS=Guillardia theta OX=55529 GN=ycf19 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.3e-08
Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 136 FLSLYNTLLVVRLVLTWFPNTP--PAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILA 195
           FL +Y  LL++R+ LTWFPN          LS + DPYL +FRGI+PPL G +D+SPIL 
Sbjct: 15  FLQIYLILLLIRVSLTWFPNVNWYGQPFYSLSRITDPYLKMFRGIVPPLIG-IDISPILG 74

Query: 196 FLVL 198
           F++L
Sbjct: 75  FILL 77

[Close]

BLAST of CsGy6G018490 vs. ExPASy Swiss-Prot
Match: P51353 (Uncharacterized protein ycf19 OS=Porphyra purpurea OX=2787 GN=ycf19 PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.4e-05
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 128 VVANGIQNFLSLYNTLLVVRLVLTWFP--NTPPAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
           ++   I NF  +Y  L++++L L WFP  N        L+ + DPYL +FRG IPP+ G 
Sbjct: 10  LLLGSIANFSEIYLILILLKLSLAWFPTVNWYNEPFCSLNRITDPYLKLFRGSIPPMFG- 69

Query: 188 LDLSPILAFLVL 198
           +D+SP+L  + L
Sbjct: 70  MDMSPMLGIIFL 80

[Close]

BLAST of CsGy6G018490 vs. NCBI nr
Match: XP_004144214.1 (ylmG homolog protein 2, chloroplastic [Cucumis sativus] >KGN47583.1 hypothetical protein Csa_019073 [Cucumis sativus])

HSP 1 Score: 500 bits (1288), Expect = 1.81e-178
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MTPHDSSLQNPKQTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQLEFAPPCNFLRHLHES 60
           MTPHDSSLQNPKQTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQLEFAPPCNFLRHLHES
Sbjct: 1   MTPHDSSLQNPKQTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQLEFAPPCNFLRHLHES 60

Query: 61  FASTTESCIRLFHSLASENPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLP 120
           FASTTESCIRLFHSLASENPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLP
Sbjct: 61  FASTTESCIRLFHSLASENPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLP 120

Query: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKR
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKR 240

Query: 241 LQGSEKNNADASQ 253
           LQGSEKNNADASQ
Sbjct: 241 LQGSEKNNADASQ 253

[Close]

BLAST of CsGy6G018490 vs. NCBI nr
Match: XP_008445540.1 (PREDICTED: ylmG homolog protein 2, chloroplastic [Cucumis melo] >KAA0064706.1 ylmG-like protein 2 [Cucumis melo var. makuwa] >TYK00724.1 ylmG-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 468 bits (1204), Expect = 1.15e-165
Identity = 238/253 (94.07%), Postives = 243/253 (96.05%), Query Frame = 0


Query: 1   MTPHDSSLQNPKQTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQLEFAPPCNFLRHLHES 60
           MTPH+SSLQNPK+TSTAFNFFPNCISSFSPAFSQTPSGPSRRRQ EFA PCNFLR LHES
Sbjct: 1   MTPHESSLQNPKRTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQPEFASPCNFLRDLHES 60

Query: 61  FASTTESCIRLFHSLASENPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLP 120
           FASTTESCIRLFHS ASENPFLHKLLSLPSEF  FR+QIH MNS NFRALSSHNFAAVLP
Sbjct: 61  FASTTESCIRLFHSFASENPFLHKLLSLPSEFQSFRFQIHSMNSRNFRALSSHNFAAVLP 120

Query: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPL+GSVDLTSSQKKWM+R
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLEGSVDLTSSQKKWMRR 240

Query: 241 LQGSEKNNADASQ 253
           LQGS KNNADA Q
Sbjct: 241 LQGSGKNNADADQ 253

[Close]

BLAST of CsGy6G018490 vs. NCBI nr
Match: XP_038884266.1 (ylmG homolog protein 2, chloroplastic [Benincasa hispida])

HSP 1 Score: 446 bits (1146), Expect = 7.97e-157
Identity = 225/253 (88.93%), Postives = 237/253 (93.68%), Query Frame = 0


Query: 1   MTPHDSSLQNPKQTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQLEFAPPCNFLRHLHES 60
           MTP +SSL NP++TSTAFNFFPNCISSFSPAFSQTPSG SRRR  EF PPCNFLR +H+S
Sbjct: 1   MTPDESSLLNPRRTSTAFNFFPNCISSFSPAFSQTPSGASRRRNAEFVPPCNFLRDVHDS 60

Query: 61  FASTTESCIRLFHSLASENPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLP 120
           FASTTESCIR FHSLASENPFLHKLLSLPSEF  FR+QIHGMNS NFRALSSHNFAAVLP
Sbjct: 61  FASTTESCIRFFHSLASENPFLHKLLSLPSEFQSFRHQIHGMNSRNFRALSSHNFAAVLP 120

Query: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDS+AGLVVANG+QNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSVAGLVVANGVQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANP PL+GSVDL +SQKKWM+R
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPTPLEGSVDLPASQKKWMRR 240

Query: 241 LQGSEKNNADASQ 253
           LQGS K  ADA+Q
Sbjct: 241 LQGSGKKKADAAQ 253

[Close]

BLAST of CsGy6G018490 vs. NCBI nr
Match: XP_022961827.1 (ylmG homolog protein 2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 407 bits (1046), Expect = 1.37e-141
Identity = 205/251 (81.67%), Postives = 224/251 (89.24%), Query Frame = 0


Query: 1   MTPHDSSLQNPKQTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQLEFAPPCNFLRHLHES 60
           MTP +SS+ NP+++STAF+FFPNCISSFSPAFSQTP G SRRR ++F PPC FLR LHES
Sbjct: 1   MTPDESSVLNPRRSSTAFSFFPNCISSFSPAFSQTPFGASRRRHVDFVPPCKFLRDLHES 60

Query: 61  FASTTESCIRLFHSLASENPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLP 120
           FA T E CI  FHSLASENPFL+KL+SL SE   F +QIHG+NS NFRALSSHNFAAVLP
Sbjct: 61  FALTAEKCIVFFHSLASENPFLNKLMSLSSELQSFHHQIHGLNSRNFRALSSHNFAAVLP 120

Query: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDS+AGL+V NGIQNFLS+YNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSVAGLLVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELP PNSSLAN  P KGS DLTSSQKKW++R
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANATPSKGSFDLTSSQKKWIRR 240

Query: 241 LQGSEKNNADA 251
           LQGS +N AD+
Sbjct: 241 LQGSGENKADS 251

[Close]

BLAST of CsGy6G018490 vs. NCBI nr
Match: KAG7029531.1 (YlmG-like protein 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 407 bits (1046), Expect = 1.37e-141
Identity = 205/251 (81.67%), Postives = 224/251 (89.24%), Query Frame = 0


Query: 1   MTPHDSSLQNPKQTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQLEFAPPCNFLRHLHES 60
           MTP +SS+ NP+++STAF+FFPNCISSFSPAFSQTP G SRRR ++F PPC FLR LHES
Sbjct: 1   MTPDESSVLNPRRSSTAFSFFPNCISSFSPAFSQTPFGASRRRHVDFVPPCKFLRDLHES 60

Query: 61  FASTTESCIRLFHSLASENPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLP 120
           FA T E CI  FHSLASENPFL+KL+SL SE   F +QIHGMNS NFRALSSHNFAAVLP
Sbjct: 61  FALTAEKCIVFFHSLASENPFLNKLMSLSSELQSFHHQIHGMNSRNFRALSSHNFAAVLP 120

Query: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDS+AGL+V NGIQNFLS+YNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSVAGLLVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELP PNSSLAN  P KGS DLT+SQKKW++R
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANATPSKGSFDLTTSQKKWIRR 240

Query: 241 LQGSEKNNADA 251
           LQGS +N AD+
Sbjct: 241 LQGSGENKADS 251

[Close]

BLAST of CsGy6G018490 vs. ExPASy TrEMBL
Match: A0A0A0KDJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G362410 PE=4 SV=1)

HSP 1 Score: 500 bits (1288), Expect = 8.75e-179
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MTPHDSSLQNPKQTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQLEFAPPCNFLRHLHES 60
           MTPHDSSLQNPKQTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQLEFAPPCNFLRHLHES
Sbjct: 1   MTPHDSSLQNPKQTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQLEFAPPCNFLRHLHES 60

Query: 61  FASTTESCIRLFHSLASENPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLP 120
           FASTTESCIRLFHSLASENPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLP
Sbjct: 61  FASTTESCIRLFHSLASENPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLP 120

Query: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKR
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKR 240

Query: 241 LQGSEKNNADASQ 253
           LQGSEKNNADASQ
Sbjct: 241 LQGSEKNNADASQ 253

[Close]

BLAST of CsGy6G018490 vs. ExPASy TrEMBL
Match: A0A5D3BN87 (YlmG-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00120 PE=4 SV=1)

HSP 1 Score: 468 bits (1204), Expect = 5.59e-166
Identity = 238/253 (94.07%), Postives = 243/253 (96.05%), Query Frame = 0


Query: 1   MTPHDSSLQNPKQTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQLEFAPPCNFLRHLHES 60
           MTPH+SSLQNPK+TSTAFNFFPNCISSFSPAFSQTPSGPSRRRQ EFA PCNFLR LHES
Sbjct: 1   MTPHESSLQNPKRTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQPEFASPCNFLRDLHES 60

Query: 61  FASTTESCIRLFHSLASENPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLP 120
           FASTTESCIRLFHS ASENPFLHKLLSLPSEF  FR+QIH MNS NFRALSSHNFAAVLP
Sbjct: 61  FASTTESCIRLFHSFASENPFLHKLLSLPSEFQSFRFQIHSMNSRNFRALSSHNFAAVLP 120

Query: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPL+GSVDLTSSQKKWM+R
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLEGSVDLTSSQKKWMRR 240

Query: 241 LQGSEKNNADASQ 253
           LQGS KNNADA Q
Sbjct: 241 LQGSGKNNADADQ 253

[Close]

BLAST of CsGy6G018490 vs. ExPASy TrEMBL
Match: A0A1S3BDU1 (ylmG homolog protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488523 PE=4 SV=1)

HSP 1 Score: 468 bits (1204), Expect = 5.59e-166
Identity = 238/253 (94.07%), Postives = 243/253 (96.05%), Query Frame = 0


Query: 1   MTPHDSSLQNPKQTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQLEFAPPCNFLRHLHES 60
           MTPH+SSLQNPK+TSTAFNFFPNCISSFSPAFSQTPSGPSRRRQ EFA PCNFLR LHES
Sbjct: 1   MTPHESSLQNPKRTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQPEFASPCNFLRDLHES 60

Query: 61  FASTTESCIRLFHSLASENPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLP 120
           FASTTESCIRLFHS ASENPFLHKLLSLPSEF  FR+QIH MNS NFRALSSHNFAAVLP
Sbjct: 61  FASTTESCIRLFHSFASENPFLHKLLSLPSEFQSFRFQIHSMNSRNFRALSSHNFAAVLP 120

Query: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPL+GSVDLTSSQKKWM+R
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLEGSVDLTSSQKKWMRR 240

Query: 241 LQGSEKNNADASQ 253
           LQGS KNNADA Q
Sbjct: 241 LQGSGKNNADADQ 253

[Close]

BLAST of CsGy6G018490 vs. ExPASy TrEMBL
Match: A0A6J1HB64 (ylmG homolog protein 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111462476 PE=4 SV=1)

HSP 1 Score: 407 bits (1046), Expect = 6.63e-142
Identity = 205/251 (81.67%), Postives = 224/251 (89.24%), Query Frame = 0


Query: 1   MTPHDSSLQNPKQTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQLEFAPPCNFLRHLHES 60
           MTP +SS+ NP+++STAF+FFPNCISSFSPAFSQTP G SRRR ++F PPC FLR LHES
Sbjct: 1   MTPDESSVLNPRRSSTAFSFFPNCISSFSPAFSQTPFGASRRRHVDFVPPCKFLRDLHES 60

Query: 61  FASTTESCIRLFHSLASENPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLP 120
           FA T E CI  FHSLASENPFL+KL+SL SE   F +QIHG+NS NFRALSSHNFAAVLP
Sbjct: 61  FALTAEKCIVFFHSLASENPFLNKLMSLSSELQSFHHQIHGLNSRNFRALSSHNFAAVLP 120

Query: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDS+AGL+V NGIQNFLS+YNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSVAGLLVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELP PNSSLAN  P KGS DLTSSQKKW++R
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANATPSKGSFDLTSSQKKWIRR 240

Query: 241 LQGSEKNNADA 251
           LQGS +N AD+
Sbjct: 241 LQGSGENKADS 251

[Close]

BLAST of CsGy6G018490 vs. ExPASy TrEMBL
Match: A0A6J1K921 (ylmG homolog protein 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492206 PE=4 SV=1)

HSP 1 Score: 404 bits (1038), Expect = 1.06e-140
Identity = 205/250 (82.00%), Postives = 223/250 (89.20%), Query Frame = 0


Query: 1   MTPHDSSLQNPKQTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQLEFAPPCNFLRHLHES 60
           MTP +SS+ NP+++STAF+FFPNCISSFSPAFSQTP G SRRR ++F PP  FLR LHES
Sbjct: 1   MTPDESSVLNPRRSSTAFSFFPNCISSFSPAFSQTPFGGSRRRHVDFFPPRKFLRDLHES 60

Query: 61  FASTTESCIRLFHSLASENPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLP 120
           FAST E CI  FHSLASENPFL KL+SL SEF  F +QIHGMNS NFRALSSHNFAAVLP
Sbjct: 61  FASTAEKCIVFFHSLASENPFLDKLMSLSSEFQSFHHQIHGMNSRNFRALSSHNFAAVLP 120

Query: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDS+AG++V NGIQNFLS+YNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSVAGILVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELP PNSSLAN  P KGS DLT+SQKKW++R
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANATPSKGSFDLTTSQKKWIRR 240

Query: 241 LQGSEKNNAD 250
           LQGS +N AD
Sbjct: 241 LQGSGENKAD 250

[Close]

BLAST of CsGy6G018490 vs. TAIR 10
Match: AT5G21920.1 (YGGT family protein )

HSP 1 Score: 220.3 bits (560), Expect = 1.7e-57
Identity = 130/237 (54.85%), Postives = 160/237 (67.51%), Query Frame = 0


Query: 22  PNCISSFSPAFSQTPSGPSRRRQLEFAPP----CNFLRHLHESFASTTESCIRLFHSLAS 81
           PN   S S AF+QTP   S +  L   PP       ++  H+S  S TE      HSLAS
Sbjct: 22  PNFFVSLSSAFTQTPLVRSNKPNLLLLPPVADSVKLIQDFHQSLISATEKFKGFLHSLAS 81

Query: 82  ENPFLHKLLSLPSEFHRFRYQIHGMNSMNFR-ALSSHNFAAVLPGDSMAGLVVANGIQNF 141
           +NP   + + L SEFH    +I   N+   R A+S+H FAAVLPGDS+AGLVVANG+ NF
Sbjct: 82  KNPLFQEAVRLSSEFHILCDEIRLRNTTRVRFAMSNHGFAAVLPGDSVAGLVVANGLINF 141

Query: 142 LSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLV 201
           L++YNT+LVVRLVLTWFP+ PPAIV+PLSTLCDPYLNIFRG IPPLGG LDLSPILAFLV
Sbjct: 142 LNIYNTILVVRLVLTWFPSAPPAIVNPLSTLCDPYLNIFRGFIPPLGG-LDLSPILAFLV 201

Query: 202 LNAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKRLQ-GSEKNNADAS 253
           LNAFTS+A ALP ELP+ +          G+V   SS+ KW++R +  S K++  +S
Sbjct: 202 LNAFTSSAMALPCELPSAD----------GAVSPASSETKWVRRRRLSSHKDHRPSS 247

[Close]

BLAST of CsGy6G018490 vs. TAIR 10
Match: AT5G21920.2 (YGGT family protein )

HSP 1 Score: 206.8 bits (525), Expect = 2.0e-53
Identity = 125/236 (52.97%), Postives = 155/236 (65.68%), Query Frame = 0


Query: 22  PNCISSFSPAFSQTPSGPSRRRQLEFAPP----CNFLRHLHESFASTTESCIRLFHSLAS 81
           PN   S S AF+QTP   S +  L   PP       ++  H+S  S TE      HSLAS
Sbjct: 22  PNFFVSLSSAFTQTPLVRSNKPNLLLLPPVADSVKLIQDFHQSLISATEKFKGFLHSLAS 81

Query: 82  ENPFLHKLLSLPSEFHRFRYQIHGMNSMNFRALSSHNFAAVLPGDSMAGLVVANGIQNFL 141
           +NP   + + L +   R R+           A+S+H FAAVLPGDS+AGLVVANG+ NFL
Sbjct: 82  KNPLFQEAIRLRNT-TRVRF-----------AMSNHGFAAVLPGDSVAGLVVANGLINFL 141

Query: 142 SLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVL 201
           ++YNT+LVVRLVLTWFP+ PPAIV+PLSTLCDPYLNIFRG IPPLGG LDLSPILAFLVL
Sbjct: 142 NIYNTILVVRLVLTWFPSAPPAIVNPLSTLCDPYLNIFRGFIPPLGG-LDLSPILAFLVL 201

Query: 202 NAFTSTAAALPAELPAPNSSLANPNPLKGSVDLTSSQKKWMKRLQ-GSEKNNADAS 253
           NAFTS+A ALP ELP+ +          G+V   SS+ KW++R +  S K++  +S
Sbjct: 202 NAFTSSAMALPCELPSAD----------GAVSPASSETKWVRRRRLSSHKDHRPSS 234

[Close]

BLAST of CsGy6G018490 vs. TAIR 10
Match: AT3G07430.1 (YGGT family protein )

HSP 1 Score: 80.5 bits (197), Expect = 2.2e-15
Identity = 41/77 (53.25%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 128 VVANGIQNFLSLYNTLLVVRLVLTWFPNTP--PAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
           VVA GI+ +L +Y+ +L+VR++L+WFPN P     +S +  LCDPYLN+FR IIPP+  T
Sbjct: 149 VVAVGIKKWLDIYSGVLMVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPIFDT 208

Query: 188 LDLSPILAFLVLNAFTS 203
           LD+SP+LAF VL    S
Sbjct: 209 LDVSPLLAFAVLGTLGS 225

[Close]

BLAST of CsGy6G018490 vs. TAIR 10
Match: AT4G27990.1 (YGGT family protein )

HSP 1 Score: 79.3 bits (194), Expect = 4.8e-15
Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 128 VVANGIQNFLSLYNTLLVVRLVLTWFPNTP--PAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
           VVA G+  +L +Y+ +L+VR++L+WFPN P     +S +  LCDPYLN+FR IIPP+  T
Sbjct: 135 VVAAGLSKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDT 194

Query: 188 LDLSPILAFLVLNAFTS 203
           LD+SP+LAF VL    S
Sbjct: 195 LDVSPLLAFAVLGTLGS 211

The following BLAST results are available for this feature:

BLAST of CsGy6G018490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C595	2.5e-56	54.85	YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG2 P...	[more]
Q9SRS3	3.0e-14	53.25	YlmG homolog protein 1-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG1...	[more]
Q9SUE0	6.8e-14	51.95	YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG1...	[more]
O78424	3.3e-08	51.56	Uncharacterized protein ycf19 OS=Guillardia theta OX=55529 GN=ycf19 PE=3 SV=1	[more]
P51353	3.4e-05	38.89	Uncharacterized protein ycf19 OS=Porphyra purpurea OX=2787 GN=ycf19 PE=3 SV=1	[more]

BLAST of CsGy6G018490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144214.1	1.81e-178	100.00	ylmG homolog protein 2, chloroplastic [Cucumis sativus] >KGN47583.1 hypothetical...	[more]
XP_008445540.1	1.15e-165	94.07	PREDICTED: ylmG homolog protein 2, chloroplastic [Cucumis melo] >KAA0064706.1 yl...	[more]
XP_038884266.1	7.97e-157	88.93	ylmG homolog protein 2, chloroplastic [Benincasa hispida]	[more]
XP_022961827.1	1.37e-141	81.67	ylmG homolog protein 2, chloroplastic [Cucurbita moschata]	[more]
KAG7029531.1	1.37e-141	81.67	YlmG-like protein 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CsGy6G018490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDJ4	8.75e-179	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G362410 PE=4 SV=1	[more]
A0A5D3BN87	5.59e-166	94.07	YlmG-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G...	[more]
A0A1S3BDU1	5.59e-166	94.07	ylmG homolog protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488523 PE...	[more]
A0A6J1HB64	6.63e-142	81.67	ylmG homolog protein 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111462...	[more]
A0A6J1K921	1.06e-140	82.00	ylmG homolog protein 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11149220...	[more]

BLAST of CsGy6G018490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21920.1	1.7e-57	54.85	YGGT family protein	[more]
AT5G21920.2	2.0e-53	52.97	YGGT family protein	[more]
AT3G07430.1	2.2e-15	53.25	YGGT family protein	[more]
AT4G27990.1	4.8e-15	51.95	YGGT family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003425	CCB3/YggT	PFAM	PF02325	YGGT	coord: 136..199 e-value: 3.2E-15 score: 56.3
IPR003425	CCB3/YggT	PANTHER	PTHR33219	YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC	coord: 55..246
None	No IPR available	PANTHER	PTHR33219:SF1	YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC	coord: 55..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G018490.1	CsGy6G018490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010020	chloroplast fission
biological_process	GO:0090143	nucleoid organization
cellular_component	GO:0016020	membrane