CsGy6G018470 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G018470
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Damaged dna-binding 2, putative isoform 1
Location	Gy14Chr6: 19197495 .. 19199928 (+)
RNA-Seq Expression	CsGy6G018470
Synteny	CsGy6G018470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGCAGAGATGATCGTGGGAAGAAAGGGGAGAGAGTGGAGGGCCCACAATTAGCCAACGTTGGGATAAGGCTTACCGAAACTTACTTCGGTTGGTCACTGCCACGTCAGTCCACCCAATCCTATTTCACATTTCATTTCATTTCTATTTCTCTCTCTCTCTCTTATCACACTGACCGACCACGACCCTCAACGTGTCCGTTTCATACACCCTTCATTTCTCCATTCTGCTGACGTGGCTCTATCCCTTTTATAACACCACATTCTCTTCCTAAATTTTCCCCTGCTTTAACCTCCATCCTAATACTTCTGCTCTCTTCCAATCACATACTTACAATTTCTCTTATCAAAATGAAAAGTAGTTCAGGTTAGGTTGGAGCCAGTGTGGACTTTGGTTTTTTCGTTTTAGGTTAGAGACAGTTTTTGTTATTGTTAAAGAAAAGGTTAGAAATTAAAAAGGATAAGAAAAAGGTGAGAGCGGAACATGAAAGGGCGATGGAAGCGCAGGCAGGGGATAAAAGGCTAAAATAATAAAAGAAAAGGAAAAAAAGAGAAAATAATAAAGTGATGAATGGAAGCCCGGCAGATGAGGATAAGGCCTTGGGCTTTCCTTTTCGGAGTTCTTTATCCTTTTCATTAACTCTCTCATCCTAGATGATATTACTCTTCTCTTCTCCTTCATTAATTGTCTACAAATCCATAATTTTCTATATTTAAATTCTTGTCTCTTCTTCTCTACACAATCTCTCCACTCCCATCGATATATCAATGCCAAACTATATTTCTTAATCTCATCTTCATTTTAAAACTATAATCTTCTTCCTTCTCTATCCCATTTGAATCACTCAATTATGTCAATTGCTCTGGAAACCAATACCGTTTTTTCTCAACCTGGATTGCCCTCTTACTGTTCTGTCTTGAATACCACCGGAATTATTCCGGTTGTTCGGCGAGAGGCGGCTCTTGCTGATGCGGTGGCGCCGGCGGATGTGGATAGATGTACTTCCTCTTCATCGTCCTCGATCGGAGAAAATAGTGGTTTCTCTGTACGATTATCGGATAATGACGATGGAGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGGAATGGAGTCGTTGGAAGAAGTTCTGCCTATCAGGTTAGCGATTTTGATTTTTTTTCTTTCTTTTTTTTTTTTGGGTTCTTCGTAATCTTCTTCTTTTCCATGGTTTCAAGATTTAGAGCAACTTGATCTATCGCTTGTTGATTTCGAGATTCAGTTGAGTTTTGACAAATTATATCATCTTGTGAATGTTATGCAGGAGAGGAATTTCAAATTTCTATAACGGGAAATCGAAATCCTTCACAAGCCTAGTAGACGCTTCCTCCTCCTCCTCCATTAAAGACATAGCGAAGCCTGAAAACGCTTTCTCTCGAAAACGGAGGAATCTTCTTGCATCTAATCTAATCGCCGGCGGCATATCAAAGCGTCCGATTATTAGTTCAAGTCGAAGCTCGTTAGCGTTGGCCGTCGTCCTGAGCAGTTCTGAAATCCACAAAAATAACGATCTGAATTCAATATTACCTCCGCCGACGCTGATTCGTCCTCCATTGTACCCCAACGGGCGAGGATCTCGTATCAATTCAGGTTCTGCAGTTCCATCTCTCTGTAAATTCCCAACTTGGCGATCATACTCCATGGCCAATATACAGTAGCTAGCGTAGGGAAGGGTTTTCCCATGGCGTCCATGGAAGCTAAATCACCATGAAAGACTAACTTAACCTCTTGTGAAACCGAGTTTCATCGAATTGGTTTCTGACGAATAACTCATTTTCTTTCAAATTTCCCACGATCTTAGGAACTCTGTTTTGATTTCCTTTTTGTATGAATGTATGTAAAGTGAAAAGAGAAAAAGCATAGCAGTTCATATTTTGAATCGATTTCTGTTTGTTCATACAATTTGAATATCAGCAAATGGAGAGAGCATGAGAGTTTCTTTTTTTAAATAAAGTAATGGGAAAAATACAGATAAGAGTTTGGGGCAAACTGAAAAGGAATTGGTAATGAATGTGTCAATGTCATATAAAGCTGATGGACTAAAATGGCATTAGAAGTGTTTATGGGATTTTATCCAATTCAATCTAAAATTACAACTAATTGTTGTTTAATAGATTGAAGGAAAGGAAAAGTGGTCAATTTGGGAGATGTTGTATCATGTGTGAAATTATATACTTTCACAATTATCAAATCATACAAAGTCCAAATCTAGATCTCATATGTTAGAGATAAATTGTGTTAGTAATTTAACTATATGAAATAGTGTCGTGTAAAACATGTGTTTATTTGTCGATAACAATGAAAATGTAGGTAACTTAAGTAGCCTATGAAGTAAAAGTTAATACGAAATACTCATTTGAACAATTATCTATTTTTCAAGTTAATATGTA

mRNA sequence

TGGCAGAGATGATCGTGGGAAGAAAGGGGAGAGAGTGGAGGGCCCACAATTAGCCAACGTTGGGATAAGGCTTACCGAAACTTACTTCGGTTGGTCACTGCCACGTCAGTCCACCCAATCCTATTTCACATTTCATTTCATTTCTATTTCTCTCTCTCTCTCTTATCACACTGACCGACCACGACCCTCAACGTGTCCGTTTCATACACCCTTCATTTCTCCATTCTGCTGACGTGGCTCTATCCCTTTTATAACACCACATTCTCTTCCTAAATTTTCCCCTGCTTTAACCTCCATCCTAATACTTCTGCTCTCTTCCAATCACATACTTACAATTTCTCTTATCAAAATGAAAAGTAGTTCAGGTTAGGTTGGAGCCAGTGTGGACTTTGGTTTTTTCGTTTTAGGTTAGAGACAGTTTTTGTTATTGTTAAAGAAAAGGTTAGAAATTAAAAAGGATAAGAAAAAGGTGAGAGCGGAACATGAAAGGGCGATGGAAGCGCAGGCAGGGGATAAAAGGCTAAAATAATAAAAGAAAAGGAAAAAAAGAGAAAATAATAAAGTGATGAATGGAAGCCCGGCAGATGAGGATAAGGCCTTGGGCTTTCCTTTTCGGAGTTCTTTATCCTTTTCATTAACTCTCTCATCCTAGATGATATTACTCTTCTCTTCTCCTTCATTAATTGTCTACAAATCCATAATTTTCTATATTTAAATTCTTGTCTCTTCTTCTCTACACAATCTCTCCACTCCCATCGATATATCAATGCCAAACTATATTTCTTAATCTCATCTTCATTTTAAAACTATAATCTTCTTCCTTCTCTATCCCATTTGAATCACTCAATTATGTCAATTGCTCTGGAAACCAATACCGTTTTTTCTCAACCTGGATTGCCCTCTTACTGTTCTGTCTTGAATACCACCGGAATTATTCCGGTTGTTCGGCGAGAGGCGGCTCTTGCTGATGCGGTGGCGCCGGCGGATGTGGATAGATGTACTTCCTCTTCATCGTCCTCGATCGGAGAAAATAGTGGTTTCTCTGTACGATTATCGGATAATGACGATGGAGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGGAATGGAGTCGTTGGAAGAAGTTCTGCCTATCAGGAGAGGAATTTCAAATTTCTATAACGGGAAATCGAAATCCTTCACAAGCCTAGTAGACGCTTCCTCCTCCTCCTCCATTAAAGACATAGCGAAGCCTGAAAACGCTTTCTCTCGAAAACGGAGGAATCTTCTTGCATCTAATCTAATCGCCGGCGGCATATCAAAGCGTCCGATTATTAGTTCAAGTCGAAGCTCGTTAGCGTTGGCCGTCGTCCTGAGCAGTTCTGAAATCCACAAAAATAACGATCTGAATTCAATATTACCTCCGCCGACGCTGATTCGTCCTCCATTGTACCCCAACGGGCGAGGATCTCGTATCAATTCAGGTTCTGCAGTTCCATCTCTCTGTAAATTCCCAACTTGGCGATCATACTCCATGGCCAATATACAGTAGCTAGCGTAGGGAAGGGTTTTCCCATGGCGTCCATGGAAGCTAAATCACCATGAAAGACTAACTTAACCTCTTGTGAAACCGAGTTTCATCGAATTGGTTTCTGACGAATAACTCATTTTCTTTCAAATTTCCCACGATCTTAGGAACTCTGTTTTGATTTCCTTTTTGTATGAATGTATGTAAAGTGAAAAGAGAAAAAGCATAGCAGTTCATATTTTGAATCGATTTCTGTTTGTTCATACAATTTGAATATCAGCAAATGGAGAGAGCATGAGAGTTTCTTTTTTTAAATAAAGTAATGGGAAAAATACAGATAAGAGTTTGGGGCAAACTGAAAAGGAATTGGTAATGAATGTGTCAATGTCATATAAAGCTGATGGACTAAAATGGCATTAGAAGTGTTTATGGGATTTTATCCAATTCAATCTAAAATTACAACTAATTGTTGTTTAATAGATTGAAGGAAAGGAAAAGTGGTCAATTTGGGAGATGTTGTATCATGTGTGAAATTATATACTTTCACAATTATCAAATCATACAAAGTCCAAATCTAGATCTCATATGTTAGAGATAAATTGTGTTAGTAATTTAACTATATGAAATAGTGTCGTGTAAAACATGTGTTTATTTGTCGATAACAATGAAAATGTAGGTAACTTAAGTAGCCTATGAAGTAAAAGTTAATACGAAATACTCATTTGAACAATTATCTATTTTTCAAGTTAATATGTA

Coding sequence (CDS)

ATGTCAATTGCTCTGGAAACCAATACCGTTTTTTCTCAACCTGGATTGCCCTCTTACTGTTCTGTCTTGAATACCACCGGAATTATTCCGGTTGTTCGGCGAGAGGCGGCTCTTGCTGATGCGGTGGCGCCGGCGGATGTGGATAGATGTACTTCCTCTTCATCGTCCTCGATCGGAGAAAATAGTGGTTTCTCTGTACGATTATCGGATAATGACGATGGAGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGGAATGGAGTCGTTGGAAGAAGTTCTGCCTATCAGGAGAGGAATTTCAAATTTCTATAACGGGAAATCGAAATCCTTCACAAGCCTAGTAGACGCTTCCTCCTCCTCCTCCATTAAAGACATAGCGAAGCCTGAAAACGCTTTCTCTCGAAAACGGAGGAATCTTCTTGCATCTAATCTAATCGCCGGCGGCATATCAAAGCGTCCGATTATTAGTTCAAGTCGAAGCTCGTTAGCGTTGGCCGTCGTCCTGAGCAGTTCTGAAATCCACAAAAATAACGATCTGAATTCAATATTACCTCCGCCGACGCTGATTCGTCCTCCATTGTACCCCAACGGGCGAGGATCTCGTATCAATTCAGGTTCTGCAGTTCCATCTCTCTGTAAATTCCCAACTTGGCGATCATACTCCATGGCCAATATACAGTAG

Protein sequence

MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGENSGFSVRLSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ*

Homology

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BLAST of CsGy6G018470 vs. NCBI nr
Match: XP_004144215.1 (uncharacterized protein LOC101211014 [Cucumis sativus] >KGN47579.1 hypothetical protein Csa_019031 [Cucumis sativus])

HSP 1 Score: 428 bits (1100), Expect = 1.31e-150
Identity = 228/229 (99.56%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGE 60
           MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGE
Sbjct: 1   MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGE 60

Query: 61  NSGFSVRLSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDAS 120
           NSGFSVR SDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDAS
Sbjct: 61  NSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDAS 120

Query: 121 SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNN 180
           SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNN
Sbjct: 121 SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNN 180

Query: 181 DLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229
           DLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ
Sbjct: 181 DLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229

[Close]

BLAST of CsGy6G018470 vs. NCBI nr
Match: KAA0064705.1 (Damaged dna-binding 2, putative isoform 1 [Cucumis melo var. makuwa] >TYK00723.1 Damaged dna-binding 2, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 396 bits (1018), Expect = 4.92e-138
Identity = 214/234 (91.45%), Postives = 221/234 (94.44%), Query Frame = 0


Query: 1   MSIALETNT-----VFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSS 60
           MSIALE+NT     VFSQ GLP YCSVLNTTGIIPVVRREAA+ADAVAP DVDRC+SSSS
Sbjct: 1   MSIALESNTRIPPSVFSQAGLPPYCSVLNTTGIIPVVRREAAVADAVAPEDVDRCSSSSS 60

Query: 61  SSIGENSGFSVRLSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120
           SSIGENSGFSVR SDNDDGEDNEAESSY+GPLGMESLEEVLPIRRGISNFYNGKSKSFTS
Sbjct: 61  SSIGENSGFSVRSSDNDDGEDNEAESSYRGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120

Query: 121 LVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180
           L DASSSSSIK+IAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE
Sbjct: 121 LADASSSSSIKEIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180

Query: 181 IHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229
            HKNNDLNSI+PPPT IRPPL+PNGR SRINSGSAVPSLCKFPTWRSYSMANIQ
Sbjct: 181 SHKNNDLNSIIPPPTPIRPPLHPNGRASRINSGSAVPSLCKFPTWRSYSMANIQ 234

[Close]

BLAST of CsGy6G018470 vs. NCBI nr
Match: XP_008445543.1 (PREDICTED: uncharacterized protein LOC103488525 [Cucumis melo])

HSP 1 Score: 396 bits (1018), Expect = 1.71e-137
Identity = 214/234 (91.45%), Postives = 221/234 (94.44%), Query Frame = 0


Query: 1   MSIALETNT-----VFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSS 60
           MSIALE+NT     VFSQ GLP YCSVLNTTGIIPVVRREAA+ADAVAP DVDRC+SSSS
Sbjct: 36  MSIALESNTRIPPSVFSQAGLPPYCSVLNTTGIIPVVRREAAVADAVAPEDVDRCSSSSS 95

Query: 61  SSIGENSGFSVRLSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120
           SSIGENSGFSVR SDNDDGEDNEAESSY+GPLGMESLEEVLPIRRGISNFYNGKSKSFTS
Sbjct: 96  SSIGENSGFSVRSSDNDDGEDNEAESSYRGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 155

Query: 121 LVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180
           L DASSSSSIK+IAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE
Sbjct: 156 LADASSSSSIKEIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 215

Query: 181 IHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229
            HKNNDLNSI+PPPT IRPPL+PNGR SRINSGSAVPSLCKFPTWRSYSMANIQ
Sbjct: 216 SHKNNDLNSIIPPPTPIRPPLHPNGRASRINSGSAVPSLCKFPTWRSYSMANIQ 269

[Close]

BLAST of CsGy6G018470 vs. NCBI nr
Match: XP_038883984.1 (uncharacterized protein LOC120074946 [Benincasa hispida])

HSP 1 Score: 352 bits (904), Expect = 1.06e-120
Identity = 200/235 (85.11%), Postives = 212/235 (90.21%), Query Frame = 0


Query: 1   MSIALETNT-----VFSQPGLPSYCSVLNTTGIIPVVRREAA-LADAVAPADVDRCTSSS 60
           MSIALE+N+     VFSQ GLPSYCSVLNTTG IPVVR+EAA + DAVA A+VD C+SSS
Sbjct: 1   MSIALESNSRIPPSVFSQSGLPSYCSVLNTTGRIPVVRQEAAAVGDAVA-AEVDGCSSSS 60

Query: 61  SSSIGENSGFSVRLSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENSGFSVR SDND+GEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSGFSVRSSDNDNGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120

Query: 121 SLVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSS 180
           SL DASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPII+SSRSSLALAVVLSSS
Sbjct: 121 SLADASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIINSSRSSLALAVVLSSS 180

Query: 181 EIHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229
           E H +NDLNS L PP  IRPPL+PNGR SR NSGS VP LCKFP+WRSYS+ANIQ
Sbjct: 181 ESHNSNDLNSRLSPP--IRPPLHPNGRASRSNSGSPVPLLCKFPSWRSYSLANIQ 232

[Close]

BLAST of CsGy6G018470 vs. NCBI nr
Match: XP_022962518.1 (uncharacterized protein LOC111462922 [Cucurbita moschata] >KAG6598596.1 hypothetical protein SDJN03_08374, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029529.1 hypothetical protein SDJN02_07868 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 330 bits (846), Expect = 7.43e-112
Identity = 189/235 (80.43%), Postives = 201/235 (85.53%), Query Frame = 0


Query: 1   MSIALETNT-----VFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADV-DRCTSSS 60
           MSIALE+N+     VFSQ  LPSYCSVLNTTG+IPVVRREA + D VAPA+V DRC+SSS
Sbjct: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRREAVVGDVVAPAEVVDRCSSSS 60

Query: 61  SSSIGENSGFSVRLSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENS FSVR  ++DDGEDNEAESSYK  LGMESLEEVLPIRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGMESLEEVLPIRRGISNFYNGKSKSFT 120

Query: 121 SLVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSS 180
           SL DASS+SSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISS  SSLALAV +SSS
Sbjct: 121 SLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSRGSSLALAVFMSSS 180

Query: 181 EIHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229
           E     DLNS L P   IRPPL+P GR SR NSGSAVP LCKFPTWRSYS+ANIQ
Sbjct: 181 ERQSGEDLNSRLSP--TIRPPLHPKGRASRSNSGSAVPLLCKFPTWRSYSLANIQ 233

[Close]

BLAST of CsGy6G018470 vs. ExPASy TrEMBL
Match: A0A0A0KFI7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G361410 PE=4 SV=1)

HSP 1 Score: 428 bits (1100), Expect = 6.33e-151
Identity = 228/229 (99.56%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGE 60
           MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGE
Sbjct: 1   MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGE 60

Query: 61  NSGFSVRLSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDAS 120
           NSGFSVR SDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDAS
Sbjct: 61  NSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDAS 120

Query: 121 SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNN 180
           SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNN
Sbjct: 121 SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNN 180

Query: 181 DLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229
           DLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ
Sbjct: 181 DLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229

[Close]

BLAST of CsGy6G018470 vs. ExPASy TrEMBL
Match: A0A5A7VFP0 (Damaged dna-binding 2, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00100 PE=4 SV=1)

HSP 1 Score: 396 bits (1018), Expect = 2.38e-138
Identity = 214/234 (91.45%), Postives = 221/234 (94.44%), Query Frame = 0


Query: 1   MSIALETNT-----VFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSS 60
           MSIALE+NT     VFSQ GLP YCSVLNTTGIIPVVRREAA+ADAVAP DVDRC+SSSS
Sbjct: 1   MSIALESNTRIPPSVFSQAGLPPYCSVLNTTGIIPVVRREAAVADAVAPEDVDRCSSSSS 60

Query: 61  SSIGENSGFSVRLSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120
           SSIGENSGFSVR SDNDDGEDNEAESSY+GPLGMESLEEVLPIRRGISNFYNGKSKSFTS
Sbjct: 61  SSIGENSGFSVRSSDNDDGEDNEAESSYRGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120

Query: 121 LVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180
           L DASSSSSIK+IAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE
Sbjct: 121 LADASSSSSIKEIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180

Query: 181 IHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229
            HKNNDLNSI+PPPT IRPPL+PNGR SRINSGSAVPSLCKFPTWRSYSMANIQ
Sbjct: 181 SHKNNDLNSIIPPPTPIRPPLHPNGRASRINSGSAVPSLCKFPTWRSYSMANIQ 234

[Close]

BLAST of CsGy6G018470 vs. ExPASy TrEMBL
Match: A0A1S3BCZ8 (uncharacterized protein LOC103488525 OS=Cucumis melo OX=3656 GN=LOC103488525 PE=4 SV=1)

HSP 1 Score: 396 bits (1018), Expect = 8.28e-138
Identity = 214/234 (91.45%), Postives = 221/234 (94.44%), Query Frame = 0


Query: 1   MSIALETNT-----VFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSS 60
           MSIALE+NT     VFSQ GLP YCSVLNTTGIIPVVRREAA+ADAVAP DVDRC+SSSS
Sbjct: 36  MSIALESNTRIPPSVFSQAGLPPYCSVLNTTGIIPVVRREAAVADAVAPEDVDRCSSSSS 95

Query: 61  SSIGENSGFSVRLSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120
           SSIGENSGFSVR SDNDDGEDNEAESSY+GPLGMESLEEVLPIRRGISNFYNGKSKSFTS
Sbjct: 96  SSIGENSGFSVRSSDNDDGEDNEAESSYRGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 155

Query: 121 LVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180
           L DASSSSSIK+IAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE
Sbjct: 156 LADASSSSSIKEIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 215

Query: 181 IHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229
            HKNNDLNSI+PPPT IRPPL+PNGR SRINSGSAVPSLCKFPTWRSYSMANIQ
Sbjct: 216 SHKNNDLNSIIPPPTPIRPPLHPNGRASRINSGSAVPSLCKFPTWRSYSMANIQ 269

[Close]

BLAST of CsGy6G018470 vs. ExPASy TrEMBL
Match: A0A6J1HF10 (uncharacterized protein LOC111462922 OS=Cucurbita moschata OX=3662 GN=LOC111462922 PE=4 SV=1)

HSP 1 Score: 330 bits (846), Expect = 3.60e-112
Identity = 189/235 (80.43%), Postives = 201/235 (85.53%), Query Frame = 0


Query: 1   MSIALETNT-----VFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADV-DRCTSSS 60
           MSIALE+N+     VFSQ  LPSYCSVLNTTG+IPVVRREA + D VAPA+V DRC+SSS
Sbjct: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRREAVVGDVVAPAEVVDRCSSSS 60

Query: 61  SSSIGENSGFSVRLSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENS FSVR  ++DDGEDNEAESSYK  LGMESLEEVLPIRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGMESLEEVLPIRRGISNFYNGKSKSFT 120

Query: 121 SLVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSS 180
           SL DASS+SSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISS  SSLALAV +SSS
Sbjct: 121 SLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSRGSSLALAVFMSSS 180

Query: 181 EIHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229
           E     DLNS L P   IRPPL+P GR SR NSGSAVP LCKFPTWRSYS+ANIQ
Sbjct: 181 ERQSGEDLNSRLSP--TIRPPLHPKGRASRSNSGSAVPLLCKFPTWRSYSLANIQ 233

[Close]

BLAST of CsGy6G018470 vs. ExPASy TrEMBL
Match: A0A6J1K8D9 (uncharacterized protein LOC111492074 OS=Cucurbita maxima OX=3661 GN=LOC111492074 PE=4 SV=1)

HSP 1 Score: 326 bits (835), Expect = 1.70e-110
Identity = 188/235 (80.00%), Postives = 201/235 (85.53%), Query Frame = 0


Query: 1   MSIALETNT-----VFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADV-DRCTSSS 60
           MSIALE+N+     VFSQ  LPSYCSVLNTTG+IPVVRREA + D VAPA+V DRC+SSS
Sbjct: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRREAVVGDVVAPAEVVDRCSSSS 60

Query: 61  SSSIGENSGFSVRLSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENS FSVR  ++DDGEDNEAESSYK  LGMESLEEVL IRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGMESLEEVLSIRRGISNFYNGKSKSFT 120

Query: 121 SLVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSS 180
           SL DASS+SSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISS  SSLALAV +SSS
Sbjct: 121 SLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSRGSSLALAVFMSSS 180

Query: 181 EIHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229
           E    + LNS L P   IRPPL+PNGR SR NSGSAVP LCKFPTWRSYS+ANIQ
Sbjct: 181 ERKSGDVLNSRLSP--TIRPPLHPNGRASRSNSGSAVPLLCKFPTWRSYSLANIQ 233

[Close]

BLAST of CsGy6G018470 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-29
Identity = 94/212 (44.34%), Postives = 128/212 (60.38%), Query Frame = 0


Query: 51  TSSSSSSIGENSGFSVRLSDN--DDGEDNEAESSYKGPLG-MESLEEVLPIRRGISNFYN 110
           +SS+SSSIG NS    + S++  DD  +NE ES YKGPL  MESLE+VLP+R+GIS +Y+
Sbjct: 37  SSSASSSIGRNSDDGEKSSEDGGDDAGENEVESPYKGPLEMMESLEQVLPVRKGISKYYS 96

Query: 111 GKSKSFTSLV-----DASSSSSIKDIAKPENAFSRKRRNLLASNL-------IAGGISKR 170
           GKSKSFT+L        +SSSS+KD+AKPEN +SR+RRNLL   +         GGISK+
Sbjct: 97  GKSKSFTNLTAEAASALTSSSSMKDLAKPENPYSRRRRNLLCHQIWENNKTTPRGGISKK 156

Query: 171 PIISSSRSSLALAVVLSSSEI------------HKNNDLNSILPPPTLIR--------PP 228
            ++SSSRS+L LA+ +++  +              ++   S  PP  L          PP
Sbjct: 157 HVMSSSRSALTLAMAVAAGVMTGEGSSSGGDSSPGSSPTTSGSPPRQLHHHQHQMKKLPP 216

[Close]

BLAST of CsGy6G018470 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 104.8 bits (260), Expect = 9.7e-23
Identity = 65/111 (58.56%), Postives = 81/111 (72.97%), Query Frame = 0


Query: 51  TSSSSSSIGENSGFSVRLSDNDDGEDNEAESSYKGPLG-MESLEEVLPIRRGISNFYNGK 110
           +S+SS SIGEN       SD+D+G +NE ESSY GPL  MESLEE LPI+R IS FY GK
Sbjct: 23  SSTSSDSIGEN-------SDDDEGGENEIESSYNGPLDMMESLEEALPIKRAISKFYKGK 82

Query: 111 SKSFTSLVDASSSSSIKDIAKPENAFSRKRRNLLASNLIA-GGISKRPIIS 160
           SKSF SL + +SS  +KD+ KPEN +SR+RRNLL+  + + GGISK+P  S
Sbjct: 83  SKSFMSLSE-TSSLPVKDLTKPENLYSRRRRNLLSHRICSRGGISKKPFKS 125

[Close]

BLAST of CsGy6G018470 vs. TAIR 10
Match: AT2G24550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits to 219 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 5.0e-11
Identity = 46/105 (43.81%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 51  TSSSSSSIGENSGFSVRLSDNDDGEDNEAESSYKGPLG--MESLEEVLPIRRGISNFYNG 110
           +S SSSSIGE+S       + ++ E+++A S  +G L     SLE+ LPI+RG+SN Y G
Sbjct: 64  SSDSSSSIGESS------ENEEEEEEDDAVSCQRGTLDSFSSSLEDSLPIKRGLSNHYVG 123

Query: 111 KSKSFTSLVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGIS 154
           KSKSF +L++A+S +  KD+ K EN F+++RR ++A+ L   G S
Sbjct: 124 KSKSFGNLMEAASKA--KDLEKVENPFNKRRRLVIANKLRRRGRS 160

[Close]

BLAST of CsGy6G018470 vs. TAIR 10
Match: AT4G31510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 205 Blast hits to 205 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 3; Plants - 187; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 8.0e-09
Identity = 59/164 (35.98%), Postives = 86/164 (52.44%), Query Frame = 0


Query: 33  RREAALADAVAPADVD------RCTSS----SSSSIGENSGFSVRLSDNDDGEDNEAESS 92
           R      D   PA +       RC  S    SSSS+GE        S+N++ ED+   SS
Sbjct: 12  RSSVTTHDQAVPASLSSRIGLRRCGRSPPPESSSSVGET-------SENEEDEDDAVSSS 71

Query: 93  YKGPLG--MESLEEVLPIRRGISNFYNGKSKSFTSLVDASSSSSIKDIAKPENAFSRKRR 152
               L     SLE+ LPI+RG+SN Y GKSKSF +L++AS+++   D+ K E+  +++RR
Sbjct: 72  QGRWLNSFSSSLEDSLPIKRGLSNHYIGKSKSFGNLMEASNTN---DLVKVESPLNKRRR 131

Query: 153 NLLASNL-IAGGISKRPIIS--SSRSSLALAVVLSSSEIHKNND 182
            L+A+ L     +S   I +  +  S   LA+  S +E HK ND
Sbjct: 132 LLIANKLRRRSSLSSFSIYTKINPNSMPLLALQESDNEDHKLND 165

[Close]

BLAST of CsGy6G018470 vs. TAIR 10
Match: AT5G24890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 2.3e-08
Identity = 39/98 (39.80%), Postives = 58/98 (59.18%), Query Frame = 0


Query: 52  SSSSSSIGE--NSGFSVRLSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGK 111
           SS SSSIG   +S      S+N++ + +  E   +G   M SLE+ LP +RG+SN Y GK
Sbjct: 59  SSDSSSIGTPGDSEEDEEESENENDDVSSKELGLRGLASMSSLEDSLPSKRGLSNHYKGK 118

Query: 112 SKSFTSLVDASSSSSIKDIAKPENAFSRKRRNLLASNL 148
           SKSF +L       S+K++AK EN  +++RR  + + L
Sbjct: 119 SKSFGNL---GEIGSVKEVAKQENPLNKRRRLQICNKL 153

The following BLAST results are available for this feature:

BLAST of CsGy6G018470 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G018470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144215.1	1.31e-150	99.56	uncharacterized protein LOC101211014 [Cucumis sativus] >KGN47579.1 hypothetical ...	[more]
KAA0064705.1	4.92e-138	91.45	Damaged dna-binding 2, putative isoform 1 [Cucumis melo var. makuwa] >TYK00723.1...	[more]
XP_008445543.1	1.71e-137	91.45	PREDICTED: uncharacterized protein LOC103488525 [Cucumis melo]	[more]
XP_038883984.1	1.06e-120	85.11	uncharacterized protein LOC120074946 [Benincasa hispida]	[more]
XP_022962518.1	7.43e-112	80.43	uncharacterized protein LOC111462922 [Cucurbita moschata] >KAG6598596.1 hypothet...	[more]

BLAST of CsGy6G018470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFI7	6.33e-151	99.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G361410 PE=4 SV=1	[more]
A0A5A7VFP0	2.38e-138	91.45	Damaged dna-binding 2, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3BCZ8	8.28e-138	91.45	uncharacterized protein LOC103488525 OS=Cucumis melo OX=3656 GN=LOC103488525 PE=...	[more]
A0A6J1HF10	3.60e-112	80.43	uncharacterized protein LOC111462922 OS=Cucurbita moschata OX=3662 GN=LOC1114629...	[more]
A0A6J1K8D9	1.70e-110	80.00	uncharacterized protein LOC111492074 OS=Cucurbita maxima OX=3661 GN=LOC111492074...	[more]

BLAST of CsGy6G018470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21940.1	1.1e-29	44.34	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G43850.1	9.7e-23	58.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G24550.1	5.0e-11	43.81	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G31510.1	8.0e-09	35.98	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G24890.1	2.3e-08	39.80	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..86
None	No IPR available	PANTHER	PTHR33172	OS08G0516900 PROTEIN	coord: 37..229
None	No IPR available	PANTHER	PTHR33172:SF37	MYOSIN LIGHT CHAIN KINASE DDB_G0279831 ISOFORM X1-RELATED	coord: 37..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G018470.1	CsGy6G018470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding