CsGy6G017945 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G017945
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr6: 18766833 .. 18771918 (+)
RNA-Seq ExpressionCsGy6G017945
SyntenyCsGy6G017945
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACCCACGGTCGGAATCTGGGGAATTTTGTGGATGATGGGTTGGGATTCAAGAAGTAGAGAAACACGACTGTGTTCCGGTGAGATTCTGGATCCCATTTTTTTTTTTTTTTTTTTGAGTAGTTTTCAGCTTTGTTAGTACAATCACAAAATAATTCTGTTGATGTGTTCTTATTGATAATTAGTGTTGTGAAATTCCAATGTGGAAGCTGATAAGTAATTTCCTTCAGCCATTTTTTCTTCTCATTTTTTTTTTTTTCAAAATCAAAATTAAATTTATTTTGTTTACACTCAAAATTAAACGAATCGTTTTGCACCGCATCTCAAAGTTAACAGTTCTCATTTTATTTCTATTGTTTATTACATGATTCCGGATCCCAAAATTAATGGATTTTTTTAACAGATGATTAAATTTGATTAATATGAAAAGGAAAAAGAAACAAGTAGCTAGTTGTTTTTTTGTTCTTGAATTATAATTTTCGCAAAAAGTATTCTTACTTTTTGACACCTCCAAATTATATTAACTATTACTTGAAATTTAATTGATTTCATCTCAACTTGTATTTATCTTCGAAAAAGAAAAGTTATTCATCTAAAAATTTAAAAATTAACCTTTCTATTACAACAAAAACTATTTTTGTTTCTCATTGAACTCAGAGTTTCAATTTGGTAGATTGTATTTTACTTTTACTTCCTCCAATTTTGCTAGCCACCACTAGGATAACTACTCTCATAGTTATTTCCTCTAGCCACTTCTTAACTTTCCATTATGAAACAAATGAAAAGTAAAACCTTTTCCCATGTGTCCTTGTGGGTCTTGAGTCTTGACCTAATGTATATTTGTCGCTAGTGAACCATTTATTTTTGTTATGATTCCTACTTAACACCAATTTAAGGTTTAAGTTTTCATGGGTAATTAAAGCTAAAGTTATAGCATGAGAAAATAGGGTAGTTTTTTTATTTGAACTTTTTACTTTTATTAAAAAGAAAAAACAAAATGTCAAAATTCTTAGACAAGAAAAAGGTTGACATTTATAATTACAACCACCGTTAGCAATGATGCCAAAATAATAAATCAAAAGGAAAATATATCAAACAACTTAATTTCTTCTCACACCATTTAAATTTCAGTTAAGTTTCAATTGAAAACAAGTGGCCCAATAATTGATGGACCCATATAACTCTATTCTTTAAATTGTAAAAATAGCAAATATAAAAACGAATAGTCCTCTAATAATTTTTTTTATAGTTATGTGATAGCCCTTTGATATATCTAATTACTTGTCATATTTGCAATATGCAAAAAGAGGTTTTATGAATTGGTTTTTTTGTCATCTAATGCAATTTCCTTTTAAAAAATCTGCCACATCCAAAAATTTTATACTAAATGAGTAATAATGTACATACATACTCATTACTATAACCTCTTTTATTAGAATAATGAGGCCAAAACGTATAAAAAGATAAATCAAAATCCGTAACTTATATTGTAAATTCATAAGCATTAAGAAATACATCTTACATAAGCATTATGCATGTTTTACACTATTTCCATGTCTTAACAGAATGATTTGAAAGGAAGAAACTAGTGAATTGCAAGGGACCTCTCGAGCAAAGGCTACGCAATGGAAACTCGTTTAGCGATTAACACATCTAGACGAAGAACCACATCATCACGTGTGCAAGATTCATTAGACGACAAGGATGGTAGATGAAGTTGATGTAACGTGACTAGACTTCTATCAAGGCTGACATGATTAGAAAAATATAAATTTTCCATAAAAAAGATGCCTATAAAAGAACTTCATCTCTATCAAGAAAGAGATTCTCCATGGGCATAAACGACCAAGATGTTTGAATAGACCGGTCAAACCCTAGAGAGAACGGTGAAAAGGACTAGCCTACCAACCATCTGTAAATGTTTTCTTCTTCTTCTTCTCCGACCATACTATAAGTGACAACTTGGAGTCTGAGTGATAAAGATTTCATTTTCCATTCCCCTAACTTGTAACGTTTTTCCTCGAATTTTCAAGACATTTGACATTATTTTAAGTTGGGTAGTTTCTTTCTAGGCTATAACATTGGCCATTTTTTCGACGATTAGGGACGAAACTAAAAAACTGAGTCTGAAGCATCACAATTTAGCTTTTGTGAGGAAAAACTATAATGTTACTCAAAATGAAACCACCCAGTAGTTAGATGTGAATTTTTAAGACCTTTGAGATTGTTCTAAGTTAAGTAGCTAGTTTCTTTCTAGGTTATAGGATTGGCTCGTTTTTCATCGTTTTCGAACGAAACTTAAAAAGTGAGTTTGGGGCATCGTTGTTTGGCTTTTGTGGACAAAAAACTTTAATATTACTCGAAATGTGTAAAAAAAAATGGATAACAAAACATAGTTGAATTGGTTATTAGAAAAATGGACATTTTTAAATATAATAAAATAAACTTTACATATTATAGCAAAATTTTAAATTCTATCAATGATAGAAATTGTAGGTGTATATCATTGTCACTAATAGAAGCATGTGGTGTTTATCAATATCTATTGTTTGATAGAATCTGAAATTTTTGTATATATTGTAAATATTTTTGTCAAATTTGCTATTTTTAACAATTCTCCTTAAAAAAGTTTTAGATATTTAATTGAAACTAACTAAGTTCTACTAATTATAGACACTACTTTTAAAATTCAACTAAAAATAAATATCTTTCTTATGTAAGTTGTTTGAATTTAAATTCATTTTTCATAACTGAAAATTTAAATTTGAAGAGAAATAAAGTCATTAGAAGCTATATTTTTCTAAAAAAAGAAATTATTAGAAGTTAGAATTTATAGTTCATATATGTACAATTCAACTAATTAAGACATGGTTTTAGTCGATAGATTATATATTCAACTTTTGACAAAATTGTAATTAAAGTGTGGGTGGAAGGAATCAAACATCTAATTTCGAAGTTGATAGTACAAGTTTTATGTTAGTTTGAGTTGCGCTCGTGTTGACGTCAAAACTCATATATTGTGAGTAACTAAAGTTTTATATATTTGATTTGATAGGTTACAAGTTTGGATTAATTAGAGAAAAATGTTGTTTCTATTTAAAGTTTTTGATAAAACTATTTAAAATAAATTTAAAAGTATTTCAAATGCTTTAATTTTTTTTCAAAATGATTTACTTTTAAAATTTAACACTTAAAAGTCAAGAAAGACATCGTTATTAACCTAACAATTTAATAGTTTATCGTATAGCATTGAAGTAATGTCAAATCATCCCGTTATCTTAAATCATTCCATTTAATGAAACTTAATTAGTATAGTATAATTAATTACATGCCTTCATAATTGACCCAATGAAATTTCAAATATGGAGGAAACCTCATAACTTGATCAAAAGTTGGGACAAAAAAACTAAGGTTACACCCTTCACATTGATTAGAAATTCTTTTAAACGTAATTATTATTATTATTATTTTGTTAAGTAAAGACATTTAGAAAATATCTTCCTTCTAATAAAACACCATATACATTTTGTTCATTTGAAATTATTCTTTTTCCTTAAATGAATTAACAATATTATTTATTATAACAGAGAGAATTTAGGGTTACATTTAAAAATTCTTACCAATAGTATGGTTATAGAATCAAATATTTGTAGTCGAAGGTCAACAATAGGGGTGGTGGCGCAGTTGGCTAGCGCGTAGGTCTCATAGCTTTAAGAGTAATCCTGAGGTCGAGAGTTCGAGCCTCTCTCACCCCATCATTTTTTGTACTCTTCGTTTAGTCATCGTATCTCAGTCTAGCAACCACCCTGAATCCTAAATTAGGACTCACATGCTCACTTCTTAACACACATCTCTTGTTTCTAACTCTAATCCGGGATTTGATATTCGTCCAAAGAACGAAAAAATAAGCACTATAGCAAACTTTCGGCCCTCCATTTCTTCCTCGTTTTCATTGCTTTTTAAACTTCCCAAAAACCACCTCCCCCGGTGCCCCCATCCTTCAGTTCCCACCACCGGACCAGATGACACATTCTTCCTGAAACTCTCCCTCAAATTCCCCTTCATTTCTCCGGTGGCAGCTTCAGGTACTCTCAACTTCCTTGTGCGATTCTACGTCTTGGTTGCTTTCCTCGTCTTGTTTCTCCAAAGGCTTGAGAAATGAACTTCTTCCCACCTTCATTTGTTGTTTGCAGATTTTTCGTATTGCTGGACTTGGTGGAATTGATAAATCCGTGTTTCCCCGTGTTCTTTTACTGTTACTTTTTTTTATTAGGTAACTGAATCTTCTTCTTCTTCTTCATCTTCATCGTCATCATCCTCTAATTTGAAAATTTTCCATCTGGTCGATGTCTTTGTTCTTGGTTGGTTTGGTTTGTAGAACCACCCCATGCTATCTTCTTTGATTTAGACTGTGTCTGTGTGGATTTACAAACTTCATCTTTATCTTGTTTTTGGCTTTCGAACTTTCAATTTGTTAACCCTAAACTTGAATAGCCTTTGAAGTTAATGATTCTTGGCTATATTTGAAAATTTATTCAAAGTAATTTTTAAATCACATGAAATTCGACCCCCAAACTTCCAAAATCATGTCACAGAAATGTCTACACCTATATATATATTTCTGTGTGCGCGCTATATCCCTGAGTGTTCTCCATCTACGATTATACTTAATAATCTAGCAACCCAATCAAATTGGTAAGTAAAGTGCCTATTAGTACTTAGATATAACATTTTCCAGCAAAAAAAAAAAGAAGCTACAACTGGTCATAAATCCTTTAAAAATGAAAAACTCAGCACGTGAAGGAATTAGTTTCATGACCAAATTCTATTTGATGAATTTAACCTGCACTTAATGATTTGTTCTCAAGAATCAATATGATTACATACTTTGATTCTTTGGTTTTTAGGAGCTACAAGCGTAACAATTTTGCCATCATAGGAAGACTTTTATGCTCTAGATTCAATATTTGTGCAGAGTAACTGAAACATTTTTCTTATTCAAGAACTCACTCTCTTCCATTAAACTAGCCAACTATTTTTTTAACAGATATGTCTATGAGATCTTTCTGTTCTTCATAAGATGA

mRNA sequence

ATGGCACCCACGGTCGGAATCTGGGGAATTTTGTGGATGATGGGTTGGGATTCAAGAAGTAGAGAAACACGACTGTGTTCCGCAAACTTTCGGCCCTCCATTTCTTCCTCGTTTTCATTGCTTTTTAAACTTCCCAAAAACCACCTCCCCCGGTGCCCCCATCCTTCAGTTCCCACCACCGGACCAGATGACACATTCTTCCTGAAACTCTCCCTCAAATTCCCCTTCATTTCTCCGGTGGCAGCTTCAGGTACTCTCAACTTCCTTGTGCGATTCTACGTCTTGATTTTTCGTATTGCTGGACTTGGTGGAATTGATAAATCCGTGTTTCCCCGTGTTCTTTTACTGTTACTTTTTTTTATTAGATATGTCTATGAGATCTTTCTGTTCTTCATAAGATGA

Coding sequence (CDS)

ATGGCACCCACGGTCGGAATCTGGGGAATTTTGTGGATGATGGGTTGGGATTCAAGAAGTAGAGAAACACGACTGTGTTCCGCAAACTTTCGGCCCTCCATTTCTTCCTCGTTTTCATTGCTTTTTAAACTTCCCAAAAACCACCTCCCCCGGTGCCCCCATCCTTCAGTTCCCACCACCGGACCAGATGACACATTCTTCCTGAAACTCTCCCTCAAATTCCCCTTCATTTCTCCGGTGGCAGCTTCAGGTACTCTCAACTTCCTTGTGCGATTCTACGTCTTGATTTTTCGTATTGCTGGACTTGGTGGAATTGATAAATCCGTGTTTCCCCGTGTTCTTTTACTGTTACTTTTTTTTATTAGATATGTCTATGAGATCTTTCTGTTCTTCATAAGATGA

Protein sequence

MAPTVGIWGILWMMGWDSRSRETRLCSANFRPSISSSFSLLFKLPKNHLPRCPHPSVPTTGPDDTFFLKLSLKFPFISPVAASGTLNFLVRFYVLIFRIAGLGGIDKSVFPRVLLLLLFFIRYVYEIFLFFIR*
Homology
[Close]
BLAST of CsGy6G017945 vs. NCBI nr
Match: KGN47517.1 (hypothetical protein Csa_019062 [Cucumis sativus])

HSP 1 Score: 264 bits (674), Expect = 8.16e-89
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MAPTVGIWGILWMMGWDSRSRETRLCSANFRPSISSSFSLLFKLPKNHLPRCPHPSVPTT 60
           MAPTVGIWGILWMMGWDSRSRETRLCSANFRPSISSSFSLLFKLPKNHLPRCPHPSVPTT
Sbjct: 1   MAPTVGIWGILWMMGWDSRSRETRLCSANFRPSISSSFSLLFKLPKNHLPRCPHPSVPTT 60

Query: 61  GPDDTFFLKLSLKFPFISPVAASGTLNFLVRFYVLIFRIAGLGGIDKSVFPRVLLLLLFF 120
           GPDDTFFLKLSLKFPFISPVAASGTLNFLVRFYVLIFRIAGLGGIDKSVFPRVLLLLLFF
Sbjct: 61  GPDDTFFLKLSLKFPFISPVAASGTLNFLVRFYVLIFRIAGLGGIDKSVFPRVLLLLLFF 120

Query: 121 IRYVYEIFLFFIR 133
           IRYVYEIFLFFIR
Sbjct: 121 IRYVYEIFLFFIR 133

[Close]
BLAST of CsGy6G017945 vs. ExPASy TrEMBL
Match: A0A0A0KGP8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355120 PE=4 SV=1)

HSP 1 Score: 264 bits (674), Expect = 3.95e-89
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MAPTVGIWGILWMMGWDSRSRETRLCSANFRPSISSSFSLLFKLPKNHLPRCPHPSVPTT 60
           MAPTVGIWGILWMMGWDSRSRETRLCSANFRPSISSSFSLLFKLPKNHLPRCPHPSVPTT
Sbjct: 1   MAPTVGIWGILWMMGWDSRSRETRLCSANFRPSISSSFSLLFKLPKNHLPRCPHPSVPTT 60

Query: 61  GPDDTFFLKLSLKFPFISPVAASGTLNFLVRFYVLIFRIAGLGGIDKSVFPRVLLLLLFF 120
           GPDDTFFLKLSLKFPFISPVAASGTLNFLVRFYVLIFRIAGLGGIDKSVFPRVLLLLLFF
Sbjct: 61  GPDDTFFLKLSLKFPFISPVAASGTLNFLVRFYVLIFRIAGLGGIDKSVFPRVLLLLLFF 120

Query: 121 IRYVYEIFLFFIR 133
           IRYVYEIFLFFIR
Sbjct: 121 IRYVYEIFLFFIR 133

The following BLAST results are available for this feature:
BLAST of CsGy6G017945 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G017945 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47517.18.16e-89100.00hypothetical protein Csa_019062 [Cucumis sativus][more]
BLAST of CsGy6G017945 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGP83.95e-89100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355120 PE=4 SV=1[more]
BLAST of CsGy6G017945 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G017945.1CsGy6G017945.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane