CsGy6G017945 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G017945
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr6: 18766833 .. 18771918 (+)
RNA-Seq Expression	CsGy6G017945
Synteny	CsGy6G017945

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACCCACGGTCGGAATCTGGGGAATTTTGTGGATGATGGGTTGGGATTCAAGAAGTAGAGAAACACGACTGTGTTCCGGTGAGATTCTGGATCCCATTTTTTTTTTTTTTTTTTTGAGTAGTTTTCAGCTTTGTTAGTACAATCACAAAATAATTCTGTTGATGTGTTCTTATTGATAATTAGTGTTGTGAAATTCCAATGTGGAAGCTGATAAGTAATTTCCTTCAGCCATTTTTTCTTCTCATTTTTTTTTTTTTCAAAATCAAAATTAAATTTATTTTGTTTACACTCAAAATTAAACGAATCGTTTTGCACCGCATCTCAAAGTTAACAGTTCTCATTTTATTTCTATTGTTTATTACATGATTCCGGATCCCAAAATTAATGGATTTTTTTAACAGATGATTAAATTTGATTAATATGAAAAGGAAAAAGAAACAAGTAGCTAGTTGTTTTTTTGTTCTTGAATTATAATTTTCGCAAAAAGTATTCTTACTTTTTGACACCTCCAAATTATATTAACTATTACTTGAAATTTAATTGATTTCATCTCAACTTGTATTTATCTTCGAAAAAGAAAAGTTATTCATCTAAAAATTTAAAAATTAACCTTTCTATTACAACAAAAACTATTTTTGTTTCTCATTGAACTCAGAGTTTCAATTTGGTAGATTGTATTTTACTTTTACTTCCTCCAATTTTGCTAGCCACCACTAGGATAACTACTCTCATAGTTATTTCCTCTAGCCACTTCTTAACTTTCCATTATGAAACAAATGAAAAGTAAAACCTTTTCCCATGTGTCCTTGTGGGTCTTGAGTCTTGACCTAATGTATATTTGTCGCTAGTGAACCATTTATTTTTGTTATGATTCCTACTTAACACCAATTTAAGGTTTAAGTTTTCATGGGTAATTAAAGCTAAAGTTATAGCATGAGAAAATAGGGTAGTTTTTTTATTTGAACTTTTTACTTTTATTAAAAAGAAAAAACAAAATGTCAAAATTCTTAGACAAGAAAAAGGTTGACATTTATAATTACAACCACCGTTAGCAATGATGCCAAAATAATAAATCAAAAGGAAAATATATCAAACAACTTAATTTCTTCTCACACCATTTAAATTTCAGTTAAGTTTCAATTGAAAACAAGTGGCCCAATAATTGATGGACCCATATAACTCTATTCTTTAAATTGTAAAAATAGCAAATATAAAAACGAATAGTCCTCTAATAATTTTTTTTATAGTTATGTGATAGCCCTTTGATATATCTAATTACTTGTCATATTTGCAATATGCAAAAAGAGGTTTTATGAATTGGTTTTTTTGTCATCTAATGCAATTTCCTTTTAAAAAATCTGCCACATCCAAAAATTTTATACTAAATGAGTAATAATGTACATACATACTCATTACTATAACCTCTTTTATTAGAATAATGAGGCCAAAACGTATAAAAAGATAAATCAAAATCCGTAACTTATATTGTAAATTCATAAGCATTAAGAAATACATCTTACATAAGCATTATGCATGTTTTACACTATTTCCATGTCTTAACAGAATGATTTGAAAGGAAGAAACTAGTGAATTGCAAGGGACCTCTCGAGCAAAGGCTACGCAATGGAAACTCGTTTAGCGATTAACACATCTAGACGAAGAACCACATCATCACGTGTGCAAGATTCATTAGACGACAAGGATGGTAGATGAAGTTGATGTAACGTGACTAGACTTCTATCAAGGCTGACATGATTAGAAAAATATAAATTTTCCATAAAAAAGATGCCTATAAAAGAACTTCATCTCTATCAAGAAAGAGATTCTCCATGGGCATAAACGACCAAGATGTTTGAATAGACCGGTCAAACCCTAGAGAGAACGGTGAAAAGGACTAGCCTACCAACCATCTGTAAATGTTTTCTTCTTCTTCTTCTCCGACCATACTATAAGTGACAACTTGGAGTCTGAGTGATAAAGATTTCATTTTCCATTCCCCTAACTTGTAACGTTTTTCCTCGAATTTTCAAGACATTTGACATTATTTTAAGTTGGGTAGTTTCTTTCTAGGCTATAACATTGGCCATTTTTTCGACGATTAGGGACGAAACTAAAAAACTGAGTCTGAAGCATCACAATTTAGCTTTTGTGAGGAAAAACTATAATGTTACTCAAAATGAAACCACCCAGTAGTTAGATGTGAATTTTTAAGACCTTTGAGATTGTTCTAAGTTAAGTAGCTAGTTTCTTTCTAGGTTATAGGATTGGCTCGTTTTTCATCGTTTTCGAACGAAACTTAAAAAGTGAGTTTGGGGCATCGTTGTTTGGCTTTTGTGGACAAAAAACTTTAATATTACTCGAAATGTGTAAAAAAAAATGGATAACAAAACATAGTTGAATTGGTTATTAGAAAAATGGACATTTTTAAATATAATAAAATAAACTTTACATATTATAGCAAAATTTTAAATTCTATCAATGATAGAAATTGTAGGTGTATATCATTGTCACTAATAGAAGCATGTGGTGTTTATCAATATCTATTGTTTGATAGAATCTGAAATTTTTGTATATATTGTAAATATTTTTGTCAAATTTGCTATTTTTAACAATTCTCCTTAAAAAAGTTTTAGATATTTAATTGAAACTAACTAAGTTCTACTAATTATAGACACTACTTTTAAAATTCAACTAAAAATAAATATCTTTCTTATGTAAGTTGTTTGAATTTAAATTCATTTTTCATAACTGAAAATTTAAATTTGAAGAGAAATAAAGTCATTAGAAGCTATATTTTTCTAAAAAAAGAAATTATTAGAAGTTAGAATTTATAGTTCATATATGTACAATTCAACTAATTAAGACATGGTTTTAGTCGATAGATTATATATTCAACTTTTGACAAAATTGTAATTAAAGTGTGGGTGGAAGGAATCAAACATCTAATTTCGAAGTTGATAGTACAAGTTTTATGTTAGTTTGAGTTGCGCTCGTGTTGACGTCAAAACTCATATATTGTGAGTAACTAAAGTTTTATATATTTGATTTGATAGGTTACAAGTTTGGATTAATTAGAGAAAAATGTTGTTTCTATTTAAAGTTTTTGATAAAACTATTTAAAATAAATTTAAAAGTATTTCAAATGCTTTAATTTTTTTTCAAAATGATTTACTTTTAAAATTTAACACTTAAAAGTCAAGAAAGACATCGTTATTAACCTAACAATTTAATAGTTTATCGTATAGCATTGAAGTAATGTCAAATCATCCCGTTATCTTAAATCATTCCATTTAATGAAACTTAATTAGTATAGTATAATTAATTACATGCCTTCATAATTGACCCAATGAAATTTCAAATATGGAGGAAACCTCATAACTTGATCAAAAGTTGGGACAAAAAAACTAAGGTTACACCCTTCACATTGATTAGAAATTCTTTTAAACGTAATTATTATTATTATTATTTTGTTAAGTAAAGACATTTAGAAAATATCTTCCTTCTAATAAAACACCATATACATTTTGTTCATTTGAAATTATTCTTTTTCCTTAAATGAATTAACAATATTATTTATTATAACAGAGAGAATTTAGGGTTACATTTAAAAATTCTTACCAATAGTATGGTTATAGAATCAAATATTTGTAGTCGAAGGTCAACAATAGGGGTGGTGGCGCAGTTGGCTAGCGCGTAGGTCTCATAGCTTTAAGAGTAATCCTGAGGTCGAGAGTTCGAGCCTCTCTCACCCCATCATTTTTTGTACTCTTCGTTTAGTCATCGTATCTCAGTCTAGCAACCACCCTGAATCCTAAATTAGGACTCACATGCTCACTTCTTAACACACATCTCTTGTTTCTAACTCTAATCCGGGATTTGATATTCGTCCAAAGAACGAAAAAATAAGCACTATAGCAAACTTTCGGCCCTCCATTTCTTCCTCGTTTTCATTGCTTTTTAAACTTCCCAAAAACCACCTCCCCCGGTGCCCCCATCCTTCAGTTCCCACCACCGGACCAGATGACACATTCTTCCTGAAACTCTCCCTCAAATTCCCCTTCATTTCTCCGGTGGCAGCTTCAGGTACTCTCAACTTCCTTGTGCGATTCTACGTCTTGGTTGCTTTCCTCGTCTTGTTTCTCCAAAGGCTTGAGAAATGAACTTCTTCCCACCTTCATTTGTTGTTTGCAGATTTTTCGTATTGCTGGACTTGGTGGAATTGATAAATCCGTGTTTCCCCGTGTTCTTTTACTGTTACTTTTTTTTATTAGGTAACTGAATCTTCTTCTTCTTCTTCATCTTCATCGTCATCATCCTCTAATTTGAAAATTTTCCATCTGGTCGATGTCTTTGTTCTTGGTTGGTTTGGTTTGTAGAACCACCCCATGCTATCTTCTTTGATTTAGACTGTGTCTGTGTGGATTTACAAACTTCATCTTTATCTTGTTTTTGGCTTTCGAACTTTCAATTTGTTAACCCTAAACTTGAATAGCCTTTGAAGTTAATGATTCTTGGCTATATTTGAAAATTTATTCAAAGTAATTTTTAAATCACATGAAATTCGACCCCCAAACTTCCAAAATCATGTCACAGAAATGTCTACACCTATATATATATTTCTGTGTGCGCGCTATATCCCTGAGTGTTCTCCATCTACGATTATACTTAATAATCTAGCAACCCAATCAAATTGGTAAGTAAAGTGCCTATTAGTACTTAGATATAACATTTTCCAGCAAAAAAAAAAAGAAGCTACAACTGGTCATAAATCCTTTAAAAATGAAAAACTCAGCACGTGAAGGAATTAGTTTCATGACCAAATTCTATTTGATGAATTTAACCTGCACTTAATGATTTGTTCTCAAGAATCAATATGATTACATACTTTGATTCTTTGGTTTTTAGGAGCTACAAGCGTAACAATTTTGCCATCATAGGAAGACTTTTATGCTCTAGATTCAATATTTGTGCAGAGTAACTGAAACATTTTTCTTATTCAAGAACTCACTCTCTTCCATTAAACTAGCCAACTATTTTTTTAACAGATATGTCTATGAGATCTTTCTGTTCTTCATAAGATGA

mRNA sequence

ATGGCACCCACGGTCGGAATCTGGGGAATTTTGTGGATGATGGGTTGGGATTCAAGAAGTAGAGAAACACGACTGTGTTCCGCAAACTTTCGGCCCTCCATTTCTTCCTCGTTTTCATTGCTTTTTAAACTTCCCAAAAACCACCTCCCCCGGTGCCCCCATCCTTCAGTTCCCACCACCGGACCAGATGACACATTCTTCCTGAAACTCTCCCTCAAATTCCCCTTCATTTCTCCGGTGGCAGCTTCAGGTACTCTCAACTTCCTTGTGCGATTCTACGTCTTGATTTTTCGTATTGCTGGACTTGGTGGAATTGATAAATCCGTGTTTCCCCGTGTTCTTTTACTGTTACTTTTTTTTATTAGATATGTCTATGAGATCTTTCTGTTCTTCATAAGATGA

Coding sequence (CDS)

ATGGCACCCACGGTCGGAATCTGGGGAATTTTGTGGATGATGGGTTGGGATTCAAGAAGTAGAGAAACACGACTGTGTTCCGCAAACTTTCGGCCCTCCATTTCTTCCTCGTTTTCATTGCTTTTTAAACTTCCCAAAAACCACCTCCCCCGGTGCCCCCATCCTTCAGTTCCCACCACCGGACCAGATGACACATTCTTCCTGAAACTCTCCCTCAAATTCCCCTTCATTTCTCCGGTGGCAGCTTCAGGTACTCTCAACTTCCTTGTGCGATTCTACGTCTTGATTTTTCGTATTGCTGGACTTGGTGGAATTGATAAATCCGTGTTTCCCCGTGTTCTTTTACTGTTACTTTTTTTTATTAGATATGTCTATGAGATCTTTCTGTTCTTCATAAGATGA

Protein sequence

MAPTVGIWGILWMMGWDSRSRETRLCSANFRPSISSSFSLLFKLPKNHLPRCPHPSVPTTGPDDTFFLKLSLKFPFISPVAASGTLNFLVRFYVLIFRIAGLGGIDKSVFPRVLLLLLFFIRYVYEIFLFFIR*

Homology

[Close]

BLAST of CsGy6G017945 vs. NCBI nr
Match: KGN47517.1 (hypothetical protein Csa_019062 [Cucumis sativus])

HSP 1 Score: 264 bits (674), Expect = 8.16e-89
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAPTVGIWGILWMMGWDSRSRETRLCSANFRPSISSSFSLLFKLPKNHLPRCPHPSVPTT 60
           MAPTVGIWGILWMMGWDSRSRETRLCSANFRPSISSSFSLLFKLPKNHLPRCPHPSVPTT
Sbjct: 1   MAPTVGIWGILWMMGWDSRSRETRLCSANFRPSISSSFSLLFKLPKNHLPRCPHPSVPTT 60

Query: 61  GPDDTFFLKLSLKFPFISPVAASGTLNFLVRFYVLIFRIAGLGGIDKSVFPRVLLLLLFF 120
           GPDDTFFLKLSLKFPFISPVAASGTLNFLVRFYVLIFRIAGLGGIDKSVFPRVLLLLLFF
Sbjct: 61  GPDDTFFLKLSLKFPFISPVAASGTLNFLVRFYVLIFRIAGLGGIDKSVFPRVLLLLLFF 120

Query: 121 IRYVYEIFLFFIR 133
           IRYVYEIFLFFIR
Sbjct: 121 IRYVYEIFLFFIR 133

[Close]

BLAST of CsGy6G017945 vs. ExPASy TrEMBL
Match: A0A0A0KGP8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355120 PE=4 SV=1)

HSP 1 Score: 264 bits (674), Expect = 3.95e-89
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAPTVGIWGILWMMGWDSRSRETRLCSANFRPSISSSFSLLFKLPKNHLPRCPHPSVPTT 60
           MAPTVGIWGILWMMGWDSRSRETRLCSANFRPSISSSFSLLFKLPKNHLPRCPHPSVPTT
Sbjct: 1   MAPTVGIWGILWMMGWDSRSRETRLCSANFRPSISSSFSLLFKLPKNHLPRCPHPSVPTT 60

Query: 61  GPDDTFFLKLSLKFPFISPVAASGTLNFLVRFYVLIFRIAGLGGIDKSVFPRVLLLLLFF 120
           GPDDTFFLKLSLKFPFISPVAASGTLNFLVRFYVLIFRIAGLGGIDKSVFPRVLLLLLFF
Sbjct: 61  GPDDTFFLKLSLKFPFISPVAASGTLNFLVRFYVLIFRIAGLGGIDKSVFPRVLLLLLFF 120

Query: 121 IRYVYEIFLFFIR 133
           IRYVYEIFLFFIR
Sbjct: 121 IRYVYEIFLFFIR 133

The following BLAST results are available for this feature:

BLAST of CsGy6G017945 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G017945 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN47517.1	8.16e-89	100.00	hypothetical protein Csa_019062 [Cucumis sativus]	[more]

BLAST of CsGy6G017945 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGP8	3.95e-89	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355120 PE=4 SV=1	[more]

BLAST of CsGy6G017945 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G017945.1	CsGy6G017945.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane