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CsGy6G017640 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACTAATATCCACACATTTCTTTAACAAACAAACATCTTCCACTCCACACCTCAATATCCTCTTCTTCCATTTTTTATTCCAATTTCCCCCAAAAAAATTCACCAAAATACCATTAACAAATTAAAAAAAAAAATTCCCCCAAACATCTTAATTTCCTCCATACAATTACATAATAAAAAAACAAAGACATCCCCCTGTTTATGCCCTAGTTTTATCCATCCCCAAAATGGCACTCGACAACTGTATACAACTGAGCACCGCCGCCACCATGTGCGCCGCCGCTTCCATACCCAAATCTCACTATTTCTCTTCAACCACAAATTACCCTCAAAAAACATCCTTCTCCACCCTCTCCCTTCAACGCCTTAACAAATCTCCCACGCCCACTTTCAGAAAACCCTTCTCCCTCACGTGCCAAGCCCGTGGAGCCGTCGACGACGGTAAGTCTTTCCATCCATTCATTTATGACTTGTTCTTACTTTCTTTGGGTTTATGGGGTTTGTGGGGTTTGTGGGGTTTGATGGGATTTTGTTGTTTGTTAGTTCAGTGAAAGAAGTAACAGAATCGAGTTGGAATAATTTGGTGGTGGAGAATCAAAAGGCTGTTTTGGTTGAATTTTGGGCACCATGGTGTGGACCTTGTAAGATAATTGAGCCAGTGATTAAGGAATTGGCAGCAGAATATGCTGGGAAGATTGTGTGTTTGAAGCTTAATACGGATCTCAGTCCAAATGTGGCTTCTAAATATGGGATTAGAAGTATTCCTACGGTTCTGTTTTTTAAGAATGGAGAGAAGAGAGAAAGTGTTATTGGGGCTGTGCCTAAATCTACTTTGACTGCCTCCATTGATAAGTATATTGAGGTTTGATTTTCAAGAATCCCCTCTTATCCAATTTCACCATATACCCTTTCTTCCAATCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCTTGTATATGTATATCATCTTGTGTAGAATTGGGAAAACTTTTTGTCCATCTCTTCTTTAATTGTTTCTGTTGTAACGATGATTTTCTTTTTCTACTTTGTGTGTTTCACTCATTAGTGTTCCAATTGTTCATTCTCAGACTCAAAAAAATTAAAAATTTGAGAAGAATGAATGTGAAGCATGGTAGATTAAAGGTTCCGAAATATGAATTTTAGGGTTTGGAGGGGAGTAATGGAAGGAGTCAGACCGAATAAGTAGTTGAGAAATGAGTAGAATCCACCCAACCAGACGAGCATTCTGGTGCTAAAAATATGTGGGGCTTATGTCTAAAAGCTTAGCTCAACCACAATTTACATTTACATGTACTTGTTCAAATTCTCATTTTTGGATTTTATGAGAAAGATGAAATGAAAGGATATCGTAACTTAAGGGAGATGGAGCTTCAGCTACTAATCAAACGATGAGGAATGAGGATATTGTTGGGGGCAAGAAAGCCAATGAATGGTTGGAACTACATCAGCAAGAAGAAACACTAATATTTCATTTACTTCATATACTTGTAATTTTGCAATTTTAGTCCATCAATTTTACTCTTTTAACAATTTTCTCATTCAACCTTGTTAAAATATTGAATATGTAATTAGTTAATCAATTGATTTGGATAAAAA AACTAATATCCACACATTTCTTTAACAAACAAACATCTTCCACTCCACACCTCAATATCCTCTTCTTCCATTTTTTATTCCAATTTCCCCCAAAAAAATTCACCAAAATACCATTAACAAATTAAAAAAAAAAATTCCCCCAAACATCTTAATTTCCTCCATACAATTACATAATAAAAAAACAAAGACATCCCCCTGTTTATGCCCTAGTTTTATCCATCCCCAAAATGGCACTCGACAACTGTATACAACTGAGCACCGCCGCCACCATGTGCGCCGCCGCTTCCATACCCAAATCTCACTATTTCTCTTCAACCACAAATTACCCTCAAAAAACATCCTTCTCCACCCTCTCCCTTCAACGCCTTAACAAATCTCCCACGCCCACTTTCAGAAAACCCTTCTCCCTCACGTGCCAAGCCCGTGGAGCCGTCGACGACGTGAAAGAAGTAACAGAATCGAGTTGGAATAATTTGGTGGTGGAGAATCAAAAGGCTGTTTTGGTTGAATTTTGGGCACCATGGTGTGGACCTTGTAAGATAATTGAGCCAGTGATTAAGGAATTGGCAGCAGAATATGCTGGGAAGATTGTGTGTTTGAAGCTTAATACGGATCTCAGTCCAAATGTGGCTTCTAAATATGGGATTAGAAGTATTCCTACGGTTCTGTTTTTTAAGAATGGAGAGAAGAGAGAAAGTGTTATTGGGGCTGTGCCTAAATCTACTTTGACTGCCTCCATTGATAAGTATATTGAGACTCAAAAAAATTAAAAATTTGAGAAGAATGAATGTGAAGCATGGTAGATTAAAGGTTCCGAAATATGAATTTTAGGGTTTGGAGGGGAGTAATGGAAGGAGTCAGACCGAATAAGTAGTTGAGAAATGAGTAGAATCCACCCAACCAGACGAGCATTCTGGTGCTAAAAATATGTGGGGCTTATGTCTAAAAGCTTAGCTCAACCACAATTTACATTTACATGTACTTGTTCAAATTCTCATTTTTGGATTTTATGAGAAAGATGAAATGAAAGGATATCGTAACTTAAGGGAGATGGAGCTTCAGCTACTAATCAAACGATGAGGAATGAGGATATTGTTGGGGGCAAGAAAGCCAATGAATGGTTGGAACTACATCAGCAAGAAGAAACACTAATATTTCATTTACTTCATATACTTGTAATTTTGCAATTTTAGTCCATCAATTTTACTCTTTTAACAATTTTCTCATTCAACCTTGTTAAAATATTGAATATGTAATTAGTTAATCAATTGATTTGGATAAAAA ATGGCACTCGACAACTGTATACAACTGAGCACCGCCGCCACCATGTGCGCCGCCGCTTCCATACCCAAATCTCACTATTTCTCTTCAACCACAAATTACCCTCAAAAAACATCCTTCTCCACCCTCTCCCTTCAACGCCTTAACAAATCTCCCACGCCCACTTTCAGAAAACCCTTCTCCCTCACGTGCCAAGCCCGTGGAGCCGTCGACGACGTGAAAGAAGTAACAGAATCGAGTTGGAATAATTTGGTGGTGGAGAATCAAAAGGCTGTTTTGGTTGAATTTTGGGCACCATGGTGTGGACCTTGTAAGATAATTGAGCCAGTGATTAAGGAATTGGCAGCAGAATATGCTGGGAAGATTGTGTGTTTGAAGCTTAATACGGATCTCAGTCCAAATGTGGCTTCTAAATATGGGATTAGAAGTATTCCTACGGTTCTGTTTTTTAAGAATGGAGAGAAGAGAGAAAGTGTTATTGGGGCTGTGCCTAAATCTACTTTGACTGCCTCCATTGATAAGTATATTGAGACTCAAAAAAATTAA MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPTFRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIETQKN* Homology
BLAST of CsGy6G017640 vs. ExPASy Swiss-Prot
Match: P07591 (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=2) HSP 1 Score: 183.7 bits (465), Expect = 1.8e-45 Identity = 98/181 (54.14%), Postives = 128/181 (70.72%), Query Frame = 0
BLAST of CsGy6G017640 vs. ExPASy Swiss-Prot
Match: Q41864 (Thioredoxin M-type, chloroplastic OS=Zea mays OX=4577 GN=TRM1 PE=2 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 4.6e-41 Identity = 92/175 (52.57%), Postives = 114/175 (65.14%), Query Frame = 0
BLAST of CsGy6G017640 vs. ExPASy Swiss-Prot
Match: P48384 (Thioredoxin M-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 4.6e-41 Identity = 75/111 (67.57%), Postives = 95/111 (85.59%), Query Frame = 0
BLAST of CsGy6G017640 vs. ExPASy Swiss-Prot
Match: Q9ZP20 (Thioredoxin M5, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TRXM PE=2 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 2.3e-40 Identity = 78/138 (56.52%), Postives = 98/138 (71.01%), Query Frame = 0
BLAST of CsGy6G017640 vs. ExPASy Swiss-Prot
Match: Q9ZP21 (Thioredoxin M-type, chloroplastic OS=Triticum aestivum OX=4565 PE=2 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 3.9e-40 Identity = 76/127 (59.84%), Postives = 93/127 (73.23%), Query Frame = 0
BLAST of CsGy6G017640 vs. NCBI nr
Match: XP_004150725.2 (thioredoxin M-type, chloroplastic [Cucumis sativus] >KAE8647190.1 hypothetical protein Csa_019038 [Cucumis sativus]) HSP 1 Score: 360 bits (923), Expect = 3.00e-125 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of CsGy6G017640 vs. NCBI nr
Match: XP_016899386.1 (PREDICTED: thioredoxin-like [Cucumis melo] >KAA0058857.1 thioredoxin-like [Cucumis melo var. makuwa] >TYK23765.1 thioredoxin-like [Cucumis melo var. makuwa]) HSP 1 Score: 337 bits (864), Expect = 2.68e-116 Identity = 168/176 (95.45%), Postives = 171/176 (97.16%), Query Frame = 0
BLAST of CsGy6G017640 vs. NCBI nr
Match: XP_038884238.1 (thioredoxin M-type, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 289 bits (739), Expect = 3.14e-97 Identity = 151/180 (83.89%), Postives = 159/180 (88.33%), Query Frame = 0
BLAST of CsGy6G017640 vs. NCBI nr
Match: XP_022989806.1 (uncharacterized protein LOC111486882 [Cucurbita maxima]) HSP 1 Score: 267 bits (682), Expect = 1.98e-88 Identity = 143/190 (75.26%), Postives = 154/190 (81.05%), Query Frame = 0
BLAST of CsGy6G017640 vs. NCBI nr
Match: KAG6602152.1 (hypothetical protein SDJN03_07385, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 265 bits (676), Expect = 1.63e-87 Identity = 142/190 (74.74%), Postives = 153/190 (80.53%), Query Frame = 0
BLAST of CsGy6G017640 vs. ExPASy TrEMBL
Match: A0A0A0KIC1 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G343710 PE=4 SV=1) HSP 1 Score: 352 bits (902), Expect = 2.08e-122 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
BLAST of CsGy6G017640 vs. ExPASy TrEMBL
Match: A0A5D3DJJ9 (Thioredoxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00860 PE=4 SV=1) HSP 1 Score: 337 bits (864), Expect = 1.30e-116 Identity = 168/176 (95.45%), Postives = 171/176 (97.16%), Query Frame = 0
BLAST of CsGy6G017640 vs. ExPASy TrEMBL
Match: A0A1S4DTR8 (thioredoxin-like OS=Cucumis melo OX=3656 GN=LOC107990489 PE=4 SV=1) HSP 1 Score: 337 bits (864), Expect = 1.30e-116 Identity = 168/176 (95.45%), Postives = 171/176 (97.16%), Query Frame = 0
BLAST of CsGy6G017640 vs. ExPASy TrEMBL
Match: A0A6J1JL70 (uncharacterized protein LOC111486882 OS=Cucurbita maxima OX=3661 GN=LOC111486882 PE=4 SV=1) HSP 1 Score: 267 bits (682), Expect = 9.60e-89 Identity = 143/190 (75.26%), Postives = 154/190 (81.05%), Query Frame = 0
BLAST of CsGy6G017640 vs. ExPASy TrEMBL
Match: A0A6J1GXN7 (uncharacterized protein LOC111457772 OS=Cucurbita moschata OX=3662 GN=LOC111457772 PE=4 SV=1) HSP 1 Score: 265 bits (676), Expect = 7.87e-88 Identity = 142/190 (74.74%), Postives = 153/190 (80.53%), Query Frame = 0
BLAST of CsGy6G017640 vs. TAIR 10
Match: AT4G03520.1 (Thioredoxin superfamily protein ) HSP 1 Score: 148.3 bits (373), Expect = 6.0e-36 Identity = 64/140 (45.71%), Postives = 101/140 (72.14%), Query Frame = 0
BLAST of CsGy6G017640 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 ) HSP 1 Score: 140.2 bits (352), Expect = 1.6e-33 Identity = 58/118 (49.15%), Postives = 88/118 (74.58%), Query Frame = 0
BLAST of CsGy6G017640 vs. TAIR 10
Match: AT1G03680.1 (thioredoxin M-type 1 ) HSP 1 Score: 137.9 bits (346), Expect = 8.1e-33 Identity = 63/143 (44.06%), Postives = 98/143 (68.53%), Query Frame = 0
BLAST of CsGy6G017640 vs. TAIR 10
Match: AT2G15570.2 (Thioredoxin superfamily protein ) HSP 1 Score: 112.5 bits (280), Expect = 3.7e-25 Identity = 61/159 (38.36%), Postives = 95/159 (59.75%), Query Frame = 0
BLAST of CsGy6G017640 vs. TAIR 10
Match: AT2G15570.1 (Thioredoxin superfamily protein ) HSP 1 Score: 112.1 bits (279), Expect = 4.8e-25 Identity = 61/159 (38.36%), Postives = 95/159 (59.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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