Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGAGGAAGATTTTCTGATAACAAAACCGATATCAACCCCATATGTGGAGGCAACAGAAGAAGCTTTAGAGTGTTCTTTTCGCTCTTTTGAAATTGCTCATGCAACTATGATGGAAGCAACTGCAGGTGAAGTAATAAAGTCACACATGCCTAAAGTTACGACAAAAAGGATGATGAGAAGTGGAGGATATGGTTTGAATCAAAGCTTGGAAACACTTCTAAATACACCAAGCAATGAAGGGAGATTTGGTTTGGGTTATATGCCAAACGTATATGATAAAATTAGGCTTCAAAAAGAAAAGAAGAAAAGGTGTTTGGAAAAGCAAGGGATGATGGTGTTTGATCCAAGTCTAAAATTTATACCAGCATTATATGATACTTTCAAGAGTGCTG
mRNA sequence
ATGGGAGAGGAAGATTTTCTGATAACAAAACCGATATCAACCCCATATGTGGAGGCAACAGAAGAAGCTTTAGAGTGTTCTTTTCGCTCTTTTGAAATTGCTCATGCAACTATGATGGAAGCAACTGCAGGTGAAGTAATAAAGTCACACATGCCTAAAGTTACGACAAAAAGGATGATGAGAAGTGGAGGATATGGTTTGAATCAAAGCTTGGAAACACTTCTAAATACACCAAGCAATGAAGGGAGATTTGGTTTGGGTTATATGCCAAACGTATATGATAAAATTAGGCTTCAAAAAGAAAAGAAGAAAAGGTGTTTGGAAAAGCAAGGGATGATGGTGTTTGATCCAAGTCTAAAATTTATACCAGCATTATATGATACTTTCAAGAGTGCTG
Coding sequence (CDS)
ATGGGAGAGGAAGATTTTCTGATAACAAAACCGATATCAACCCCATATGTGGAGGCAACAGAAGAAGCTTTAGAGTGTTCTTTTCGCTCTTTTGAAATTGCTCATGCAACTATGATGGAAGCAACTGCAGGTGAAGTAATAAAGTCACACATGCCTAAAGTTACGACAAAAAGGATGATGAGAAGTGGAGGATATGGTTTGAATCAAAGCTTGGAAACACTTCTAAATACACCAAGCAATGAAGGGAGATTTGGTTTGGGTTATATGCCAAACGTATATGATAAAATTAGGCTTCAAAAAGAAAAGAAGAAAAGGTGTTTGGAAAAGCAAGGGATGATGGTGTTTGATCCAAGTCTAAAATTTATACCAGCATTATATGATACTTTCAAGAGTGCTG
Protein sequence
MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVTTKRMMRSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKKRCLEKQGMMVFDPSLKFIPALYDTFKSAX
Homology
BLAST of CsGy6G017438 vs. NCBI nr
Match:
KAE8648202.1 (hypothetical protein Csa_018419, partial [Cucumis sativus] >KAE8649580.1 hypothetical protein Csa_021558, partial [Cucumis sativus])
HSP 1 Score: 268 bits (684), Expect = 2.26e-90
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
Query: 1 MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVTTKRMM 60
MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVTTKRMM
Sbjct: 1 MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVTTKRMM 60
Query: 61 RSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKKRCLEKQGMMVFDPSLK 120
RSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKKRCLEKQGMMVFDPSLK
Sbjct: 61 RSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKKRCLEKQGMMVFDPSLK 120
Query: 121 FIPALYDTFKSA 132
FIPALYDTFKSA
Sbjct: 121 FIPALYDTFKSA 132
BLAST of CsGy6G017438 vs. NCBI nr
Match:
XP_031737546.1 (uncharacterized protein LOC116402435 [Cucumis sativus])
HSP 1 Score: 266 bits (681), Expect = 9.89e-82
Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0
Query: 1 MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVTTKRMM 60
MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVTTKRMM
Sbjct: 652 MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVTTKRMM 711
Query: 61 RSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKKRCLEKQGMMVFDPSLK 120
RSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKK+CLEKQGMMVFDPSLK
Sbjct: 712 RSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKKKCLEKQGMMVFDPSLK 771
Query: 121 FIPALYDTFKSA 132
FIPALYDTFKSA
Sbjct: 772 FIPALYDTFKSA 783
BLAST of CsGy6G017438 vs. NCBI nr
Match:
XP_031742474.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC116404360 [Cucumis sativus])
HSP 1 Score: 268 bits (684), Expect = 4.17e-80
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
Query: 1 MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVTTKRMM 60
MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVTTKRMM
Sbjct: 726 MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVTTKRMM 785
Query: 61 RSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKKRCLEKQGMMVFDPSLK 120
RSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKKRCLEKQGMMVFDPSLK
Sbjct: 786 RSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKKRCLEKQGMMVFDPSLK 845
Query: 121 FIPALYDTFKSA 132
FIPALYDTFKSA
Sbjct: 846 FIPALYDTFKSA 857
BLAST of CsGy6G017438 vs. NCBI nr
Match:
XP_031742360.1 (uncharacterized protein LOC116404324 [Cucumis sativus])
HSP 1 Score: 268 bits (684), Expect = 4.18e-80
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
Query: 1 MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVTTKRMM 60
MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVTTKRMM
Sbjct: 956 MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVTTKRMM 1015
Query: 61 RSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKKRCLEKQGMMVFDPSLK 120
RSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKKRCLEKQGMMVFDPSLK
Sbjct: 1016 RSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKKRCLEKQGMMVFDPSLK 1075
Query: 121 FIPALYDTFKSA 132
FIPALYDTFKSA
Sbjct: 1076 FIPALYDTFKSA 1087
BLAST of CsGy6G017438 vs. NCBI nr
Match:
XP_031740016.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC116403346 [Cucumis sativus])
HSP 1 Score: 268 bits (684), Expect = 4.18e-80
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
Query: 1 MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVTTKRMM 60
MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVTTKRMM
Sbjct: 879 MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVTTKRMM 938
Query: 61 RSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKKRCLEKQGMMVFDPSLK 120
RSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKKRCLEKQGMMVFDPSLK
Sbjct: 939 RSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKKRCLEKQGMMVFDPSLK 998
Query: 121 FIPALYDTFKSA 132
FIPALYDTFKSA
Sbjct: 999 FIPALYDTFKSA 1010
BLAST of CsGy6G017438 vs. ExPASy TrEMBL
Match:
A0A5D3DVI7 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1784G00180 PE=4 SV=1)
HSP 1 Score: 195 bits (495), Expect = 1.28e-60
Identity = 98/134 (73.13%), Postives = 109/134 (81.34%), Query Frame = 0
Query: 1 MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVT--TKR 60
MGEEDFLITKP+STPYVEATEEALECSFRS EIAHATMMEA EVIK H KV T R
Sbjct: 1 MGEEDFLITKPVSTPYVEATEEALECSFRSSEIAHATMMEAIVDEVIKPHKSKVEVMTTR 60
Query: 61 MMRSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKKRCLEKQGMMVFDPS 120
+M GGY LN++LETLL T SN+G+FGLGY P++YDKIRLQ+EKKK+CL K M FDPS
Sbjct: 61 IMGGGGYSLNKNLETLLKTSSNDGKFGLGYKPSIYDKIRLQEEKKKKCLAKLEMREFDPS 120
Query: 121 LKFIPALYDTFKSA 132
+K IP LYD FKSA
Sbjct: 121 IKLIPELYDIFKSA 134
BLAST of CsGy6G017438 vs. ExPASy TrEMBL
Match:
A0A5D3DA63 (Protein NYNRIN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00300 PE=4 SV=1)
HSP 1 Score: 199 bits (506), Expect = 1.11e-59
Identity = 101/134 (75.37%), Postives = 110/134 (82.09%), Query Frame = 0
Query: 1 MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVT--TKR 60
MGEEDFLITKP+STPYVEATEEALECSFRSFEIAHATMMEAT EVIK H KV T R
Sbjct: 1 MGEEDFLITKPVSTPYVEATEEALECSFRSFEIAHATMMEATVDEVIKPHKSKVEVMTTR 60
Query: 61 MMRSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKKRCLEKQGMMVFDPS 120
+M GGY LNQ+LETLL PSN+GRFGLGY P++YDKIRLQ+EKKK+ L K M FDPS
Sbjct: 61 IMGGGGYSLNQNLETLLKIPSNDGRFGLGYKPSIYDKIRLQEEKKKKRLTKLEMREFDPS 120
Query: 121 LKFIPALYDTFKSA 132
+K IP LYD FKSA
Sbjct: 121 IKLIPELYDIFKSA 134
BLAST of CsGy6G017438 vs. ExPASy TrEMBL
Match:
A0A5A7TNR9 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G003240 PE=4 SV=1)
HSP 1 Score: 191 bits (485), Expect = 1.24e-59
Identity = 98/134 (73.13%), Postives = 109/134 (81.34%), Query Frame = 0
Query: 1 MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVT--TKR 60
MGEEDFLITK +STPYVEATEEALECSFRSFEIAHATMMEAT EVIK H KV T R
Sbjct: 1 MGEEDFLITKLVSTPYVEATEEALECSFRSFEIAHATMMEATVDEVIKPHKSKVEVMTTR 60
Query: 61 MMRSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKKRCLEKQGMMVFDPS 120
++ GGY LNQ+LETLL TPSN+GRFGLGY P++YDKIRLQ+EKKK+ L K M FDPS
Sbjct: 61 IIGGGGYSLNQNLETLLKTPSNDGRFGLGYKPSIYDKIRLQEEKKKKRLTKLEMREFDPS 120
Query: 121 LKFIPALYDTFKSA 132
+K I LYD FKS+
Sbjct: 121 IKLILELYDIFKSS 134
BLAST of CsGy6G017438 vs. ExPASy TrEMBL
Match:
A0A5D3CRD2 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00040 PE=4 SV=1)
HSP 1 Score: 190 bits (483), Expect = 2.49e-59
Identity = 98/134 (73.13%), Postives = 108/134 (80.60%), Query Frame = 0
Query: 1 MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVT--TKR 60
MGEEDFLITK +STPYVEATEEALECSFRSFEIAHATMMEAT EVIK H KV T R
Sbjct: 1 MGEEDFLITKLVSTPYVEATEEALECSFRSFEIAHATMMEATVDEVIKPHKSKVEVMTTR 60
Query: 61 MMRSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKKRCLEKQGMMVFDPS 120
+M GGY L+Q+LETLL T SN+GRFGLGY P++YDKIRLQ++KKK L K M FDPS
Sbjct: 61 IMGGGGYSLDQNLETLLKTSSNDGRFGLGYKPSIYDKIRLQEKKKKNRLAKLEMREFDPS 120
Query: 121 LKFIPALYDTFKSA 132
+K IP LYD FKSA
Sbjct: 121 IKLIPELYDIFKSA 134
BLAST of CsGy6G017438 vs. ExPASy TrEMBL
Match:
A0A5A7V7W3 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G002750 PE=4 SV=1)
HSP 1 Score: 191 bits (484), Expect = 2.92e-59
Identity = 98/134 (73.13%), Postives = 108/134 (80.60%), Query Frame = 0
Query: 1 MGEEDFLITKPISTPYVEATEEALECSFRSFEIAHATMMEATAGEVIKSHMPKVT--TKR 60
MGEEDFLITK +STPYVEATEEAL+CSFRSFEIAHATMMEAT EVIK H KV T R
Sbjct: 2 MGEEDFLITKSVSTPYVEATEEALQCSFRSFEIAHATMMEATVDEVIKPHKSKVEVMTTR 61
Query: 61 MMRSGGYGLNQSLETLLNTPSNEGRFGLGYMPNVYDKIRLQKEKKKRCLEKQGMMVFDPS 120
+M GGY LNQ+LETLL TPSN+GRFGLGY ++YDKIRLQ+EKKK+ L K M FDPS
Sbjct: 62 IMMGGGYSLNQNLETLLKTPSNDGRFGLGYKSSIYDKIRLQEEKKKKRLAKLEMREFDPS 121
Query: 121 LKFIPALYDTFKSA 132
+K I LYD FKSA
Sbjct: 122 IKLILQLYDIFKSA 135
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAE8648202.1 | 2.26e-90 | 100.00 | hypothetical protein Csa_018419, partial [Cucumis sativus] >KAE8649580.1 hypothe... | [more] |
XP_031737546.1 | 9.89e-82 | 99.24 | uncharacterized protein LOC116402435 [Cucumis sativus] | [more] |
XP_031742474.1 | 4.17e-80 | 100.00 | LOW QUALITY PROTEIN: uncharacterized protein LOC116404360 [Cucumis sativus] | [more] |
XP_031742360.1 | 4.18e-80 | 100.00 | uncharacterized protein LOC116404324 [Cucumis sativus] | [more] |
XP_031740016.1 | 4.18e-80 | 100.00 | LOW QUALITY PROTEIN: uncharacterized protein LOC116403346 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3DVI7 | 1.28e-60 | 73.13 | Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178... | [more] |
A0A5D3DA63 | 1.11e-59 | 75.37 | Protein NYNRIN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G... | [more] |
A0A5A7TNR9 | 1.24e-59 | 73.13 | Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G... | [more] |
A0A5D3CRD2 | 2.49e-59 | 73.13 | Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488... | [more] |
A0A5A7V7W3 | 2.92e-59 | 73.13 | Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G... | [more] |
Match Name | E-value | Identity | Description | |